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PMC:3342329 / 27739-27902 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T13308 72-76 Protein denotes CCR5
T13307 0-4 Protein denotes CCR5
T13300 72-76 Protein denotes CCR5
T13299 0-4 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T13292 72-76 Protein denotes CCR5
T13291 0-4 Protein denotes CCR5

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13567 82-89 Negative_regulation denotes deleted
T13565 72-76 Protein denotes CCR5
T13564 0-4 Protein denotes CCR5
R9290 T13565 T13567 themeOf CCR5,deleted

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T13530 72-76 Protein denotes CCR5
T13529 0-4 Protein denotes CCR5

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13514 144-162 NN denotes 129P2-Cmkbr5tm1Kuz
T13513 143-144 -COLON- denotes ;
T13512 141-143 NN denotes B6
T13511 137-140 CC denotes and
T13510 120-136 NN denotes 129P2-Ccr5tm1kuz
T13509 119-120 -COLON- denotes ;
T13508 117-119 NN denotes B6
T13507 115-116 -COMMA- denotes ,
T13506 108-115 NN denotes strains
T13505 99-107 JJ denotes parental
T13504 95-98 DT denotes the
T13503 90-94 IN denotes from
T13502 82-89 VB denotes deleted
T13501 77-81 NN denotes gene
T13500 72-76 NN denotes CCR5
T13499 68-71 DT denotes the
T13498 65-67 IN denotes of
T13497 58-64 NN denotes region
T13496 51-57 VB denotes coding
T13495 44-50 JJ denotes entire
T13494 40-43 DT denotes the
T13493 35-39 VB denotes have
T13492 33-34 -RRB- denotes )
T13491 15-33 NN denotes 129P2-Ccr5tm1Kuz/J
T13490 13-14 -COMMA- denotes ,
T13489 11-13 NN denotes B6
T13488 10-11 -LRB- denotes (
T13487 5-9 NN denotes mice
T13486 0-4 NN denotes CCR5
R9252 T13487 T13486 arg1Of mice,CCR5
R9253 T13487 T13488 arg1Of mice,(
R9254 T13487 T13493 arg1Of mice,have
R9255 T13489 T13488 arg2Of B6,(
R9256 T13489 T13490 arg1Of B6,","
R9257 T13491 T13490 arg2Of 129P2-Ccr5tm1Kuz/J,","
R9258 T13492 T13488 arg3Of ),(
R9259 T13497 T13493 arg2Of region,have
R9260 T13497 T13494 arg1Of region,the
R9261 T13497 T13495 arg1Of region,entire
R9262 T13497 T13496 arg1Of region,coding
R9263 T13497 T13498 arg1Of region,of
R9264 T13501 T13498 arg2Of gene,of
R9265 T13501 T13499 arg1Of gene,the
R9266 T13501 T13500 arg1Of gene,CCR5
R9267 T13501 T13502 arg2Of gene,deleted
R9268 T13501 T13507 arg1Of gene,","
R9269 T13502 T13503 arg1Of deleted,from
R9270 T13506 T13503 arg2Of strains,from
R9271 T13506 T13504 arg1Of strains,the
R9272 T13506 T13505 arg1Of strains,parental
R9273 T13508 T13507 arg2Of B6,","
R9274 T13508 T13509 arg1Of B6,;
R9275 T13510 T13511 arg1Of 129P2-Ccr5tm1kuz,and
R9276 T13511 T13509 arg2Of and,;
R9277 T13511 T13513 arg1Of and,;
R9278 T13512 T13511 arg2Of B6,and
R9279 T13514 T13513 arg2Of 129P2-Cmkbr5tm1Kuz,;

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T13333 72-76 Protein denotes CCR5
T13332 0-4 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13539 72-76 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T13538 0-4 http://www.uniprot.org/uniprot/P51681 denotes CCR5

sentences

Id Subject Object Predicate Lexical cue
T13314 0-163 Sentence denotes CCR5 mice (B6, 129P2-Ccr5tm1Kuz/J) have the entire coding region of the CCR5 gene deleted from the parental strains, B6;129P2-Ccr5tm1kuz and B6;129P2-Cmkbr5tm1Kuz.
T210 0-163 Sentence denotes CCR5 mice (B6, 129P2-Ccr5tm1Kuz/J) have the entire coding region of the CCR5 gene deleted from the parental strains, B6;129P2-Ccr5tm1kuz and B6;129P2-Cmkbr5tm1Kuz.

simple1

Id Subject Object Predicate Lexical cue
T13342 72-76 Protein denotes CCR5
T13341 0-4 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T13549 82-89 Negative_regulation denotes deleted
T13547 72-76 Protein denotes CCR5
T13546 0-4 Protein denotes CCR5
R9286 T13547 T13549 themeOf CCR5,deleted

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T13590 65-116 Regulation denotes of the CCR5 gene deleted from the parental strains,
T13586 72-76 Protein denotes CCR5
T13584 0-4 Protein denotes CCR5
T13583 65-116 Protein denotes of the CCR5 gene deleted from the parental strains,
T13577 0-9 Protein denotes CCR5 mice
R9291 T13583 T13590 themeOf "of the CCR5 gene deleted from the parental strains,","of the CCR5 gene deleted from the parental strains,"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13783 82-89 VBD denotes deleted
T13782 77-81 NN denotes gene
T13781 72-76 NNP denotes CCR5
T13780 68-71 DT denotes the
T13779 65-67 IN denotes of
T13778 58-64 NN denotes region
T13777 51-57 NN denotes coding
T13776 44-50 JJ denotes entire
T13775 40-43 DT denotes the
T13774 35-39 VBP denotes have
T13773 33-34 -RRB- denotes )
T13772 32-33 NNP denotes J
T13771 31-32 NN denotes /
T13770 15-31 JJ denotes 129P2-Ccr5tm1Kuz
T13769 13-14 , denotes ,
T13768 11-13 CD denotes B6
T13767 10-11 -LRB- denotes (
T13766 5-9 NNS denotes mice
T13765 0-4 CD denotes CCR5
T13796 162-163 . denotes .
T13795 144-162 NNP denotes 129P2-Cmkbr5tm1Kuz
T13794 143-144 : denotes ;
T13793 141-143 NNP denotes B6
T13792 137-140 CC denotes and
T13791 120-136 NNP denotes 129P2-Ccr5tm1kuz
T13790 119-120 : denotes ;
T13789 117-119 NNP denotes B6
T13788 115-116 , denotes ,
T13787 108-115 NNS denotes strains
T13786 99-107 JJ denotes parental
T13785 95-98 DT denotes the
T13784 90-94 IN denotes from
R9466 T13765 T13766 nummod CCR5,mice
R9467 T13766 T13774 nsubj mice,have
R9468 T13767 T13766 punct (,mice
R9469 T13768 T13766 appos B6,mice
R9470 T13769 T13768 punct ",",B6
R9471 T13770 T13772 amod 129P2-Ccr5tm1Kuz,J
R9472 T13771 T13772 compound /,J
R9473 T13772 T13768 appos J,B6
R9474 T13773 T13766 punct ),mice
R9475 T13774 T13795 ccomp have,129P2-Cmkbr5tm1Kuz
R9476 T13775 T13778 det the,region
R9477 T13776 T13778 amod entire,region
R9478 T13777 T13778 compound coding,region
R9479 T13778 T13774 dobj region,have
R9480 T13779 T13778 prep of,region
R9481 T13780 T13782 det the,gene
R9482 T13781 T13782 compound CCR5,gene
R9483 T13782 T13779 pobj gene,of
R9484 T13783 T13774 conj deleted,have
R9485 T13784 T13783 prep from,deleted
R9486 T13785 T13787 det the,strains
R9487 T13786 T13787 amod parental,strains
R9488 T13787 T13784 pobj strains,from
R9489 T13788 T13783 punct ",",deleted
R9490 T13789 T13783 conj B6,deleted
R9491 T13790 T13789 punct ;,B6
R9492 T13791 T13789 conj 129P2-Ccr5tm1kuz,B6
R9493 T13792 T13791 cc and,129P2-Ccr5tm1kuz
R9494 T13793 T13791 conj B6,129P2-Ccr5tm1kuz
R9495 T13794 T13795 punct ;,129P2-Cmkbr5tm1Kuz
R9496 T13795 T13795 ROOT 129P2-Cmkbr5tm1Kuz,129P2-Cmkbr5tm1Kuz
R9497 T13796 T13795 punct .,129P2-Cmkbr5tm1Kuz

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13570 72-81 Protein denotes CCR5 gene