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PMC:3342329 / 247-347 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T89 94-98 Protein denotes CCR5
T88 79-83 Protein denotes CCR5
T87 14-24 Gene_expression denotes expression
T86 8-12 Protein denotes CCR5
T64 94-98 Protein denotes CCR5
T63 79-83 Protein denotes CCR5
T62 8-12 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T28 94-98 Protein denotes CCR5
T27 79-83 Protein denotes CCR5
T26 8-12 Protein denotes CCR5
T47 14-24 Gene_expression denotes expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T640 14-24 Gene_expression denotes expression
T639 84-92 Negative_regulation denotes knockout
T620 94-98 Protein denotes CCR5
T619 79-83 Protein denotes CCR5
T618 8-12 Protein denotes CCR5
R339 T618 T640 themeOf CCR5,expression
R340 T619 T639 themeOf CCR5,knockout
R341 T620 T639 themeOf CCR5,knockout

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T766 14-24 Gene_expression denotes expression
T765 84-92 Negative_regulation denotes knockout
T746 94-98 Protein denotes CCR5
T745 79-83 Protein denotes CCR5
T744 8-12 Protein denotes CCR5
R408 T744 T766 themeOf CCR5,expression
R409 T745 T765 themeOf CCR5,knockout
R410 T746 T765 themeOf CCR5,knockout

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T301 76-78 IN denotes in
T300 69-75 NN denotes growth
T299 60-68 NN denotes melanoma
T298 51-59 VB denotes compared
T297 48-50 PRP denotes we
T296 46-47 -COMMA- denotes ,
T295 35-46 NN denotes development
T294 29-34 NN denotes tumor
T293 25-28 CC denotes and
T292 14-24 NN denotes expression
T291 12-13 -RRB- denotes )
T290 8-12 NN denotes CCR5
T289 7-8 -LRB- denotes (
T288 5-6 CD denotes 5
T287 0-4 NN denotes type
T304 93-94 -LRB- denotes (
T303 84-92 NN denotes knockout
T302 79-83 NN denotes CCR5
R65 T290 T289 arg2Of CCR5,(
R66 T291 T289 arg3Of ),(
R70 T292 T287 arg1Of expression,type
R71 T292 T288 arg1Of expression,5
R72 T292 T289 arg1Of expression,(
R73 T292 T293 arg1Of expression,and
R75 T295 T293 arg2Of development,and
R76 T295 T294 arg1Of development,tumor
R78 T297 T298 arg1Of we,compared
R80 T298 T296 arg1Of compared,","
R81 T300 T298 arg2Of growth,compared
R82 T300 T299 arg1Of growth,melanoma
R83 T300 T301 arg1Of growth,in
R84 T303 T302 arg1Of knockout,CCR5
R85 T303 T304 arg1Of knockout,(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T170 94-98 Protein denotes CCR5
T169 79-83 Protein denotes CCR5
T168 8-12 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T536 94-98 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T535 79-83 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T534 8-12 http://www.uniprot.org/uniprot/P51681 denotes CCR5

GO-BP

Id Subject Object Predicate Lexical cue
T188 69-75 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T187 35-46 http://purl.obolibrary.org/obo/GO_0032502 denotes development

simple1

Id Subject Object Predicate Lexical cue
T243 94-98 Protein denotes CCR5
T242 79-83 Protein denotes CCR5
T241 8-12 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T579 84-92 Negative_regulation denotes knockout
T578 14-24 Gene_expression denotes expression
T560 94-98 Protein denotes CCR5
T559 79-83 Protein denotes CCR5
T558 8-12 Protein denotes CCR5
R315 T558 T578 themeOf CCR5,expression
R316 T559 T579 themeOf CCR5,knockout
R317 T560 T579 themeOf CCR5,knockout

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T809 8-12 Protein denotes CCR5
T787 0-13 Protein denotes type 5 (CCR5)
T786 79-83 Protein denotes CCR5

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T869 99-100 NN denotes /
T868 98-99 CD denotes −
T867 94-98 CD denotes CCR5
T866 93-94 -LRB- denotes (
T865 84-92 NN denotes knockout
T864 79-83 CD denotes CCR5
T863 76-78 IN denotes in
T862 69-75 NN denotes growth
T861 60-68 NN denotes melanoma
T860 51-59 VBD denotes compared
T859 48-50 PRP denotes we
T858 46-47 , denotes ,
T857 35-46 NN denotes development
T856 29-34 NN denotes tumor
T855 25-28 CC denotes and
T854 14-24 NN denotes expression
T853 12-13 -RRB- denotes )
T852 8-12 NNS denotes CCR5
T851 7-8 -LRB- denotes (
T850 5-6 CD denotes 5
T849 0-4 NN denotes type
R455 T850 T849 nummod 5,type
R456 T851 T852 punct (,CCR5
R457 T852 T849 appos CCR5,type
R458 T853 T852 punct ),CCR5
R459 T854 T852 conj expression,CCR5
R460 T855 T854 cc and,expression
R461 T856 T857 compound tumor,development
R462 T857 T854 conj development,expression
R463 T858 T860 punct ",",compared
R464 T859 T860 nsubj we,compared
R465 T860 T860 ROOT compared,compared
R466 T861 T862 compound melanoma,growth
R467 T862 T860 dobj growth,compared
R468 T863 T862 prep in,growth
R469 T864 T865 nummod CCR5,knockout
R470 T865 T863 pobj knockout,in
R471 T866 T865 punct (,knockout
R472 T867 T868 nummod CCR5,−

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T652 14-24 Gene_expression denotes expression
T651 14-24 Gene_expression denotes expression
T650 79-83 Protein denotes CCR5
T649 8-12 Protein denotes CCR5
R350 T649 T652 themeOf CCR5,expression