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PMC:3342329 / 21232-21381 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T8934 46-50 Protein denotes CCR5
T8862 46-50 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T8769 46-50 Protein denotes CCR5

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T11124 46-50 Protein denotes CCR5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T10796 46-50 Protein denotes CCR5

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9809 139-148 NN denotes cytokines
T9808 134-138 JJ denotes many
T9807 131-133 IN denotes by
T9806 119-130 VB denotes inactivated
T9805 116-118 CC denotes or
T9804 106-115 VB denotes activated
T9803 103-105 VB denotes is
T9802 97-102 NN denotes NF-κB
T9801 92-96 IN denotes that
T9800 81-91 JJ denotes noteworthy
T9799 78-80 VB denotes is
T9798 75-77 PRP denotes it
T9797 73-74 -COMMA- denotes ,
T9796 68-73 NN denotes NF-κB
T9795 54-67 VB denotes downregulates
T9794 46-53 NN denotes CCR5−/−
T9793 42-45 WRB denotes how
T9792 39-41 TO denotes to
T9791 36-38 IN denotes as
T9790 30-35 JJ denotes clear
T9789 26-29 RB denotes not
T9788 23-25 VB denotes is
T9787 13-22 NN denotes mechanism
T9786 9-12 DT denotes the
T9785 0-8 IN denotes Although
R6337 T9787 T9786 arg1Of mechanism,the
R6338 T9787 T9788 arg1Of mechanism,is
R6339 T9787 T9790 arg1Of mechanism,clear
R6340 T9788 T9785 arg2Of is,Although
R6341 T9788 T9789 arg1Of is,not
R6342 T9790 T9788 arg2Of clear,is
R6343 T9790 T9792 arg1Of clear,to
R6344 T9792 T9791 arg1Of to,as
R6345 T9793 T9792 arg2Of how,to
R6346 T9794 T9795 arg1Of CCR5−/−,downregulates
R6347 T9795 T9793 arg1Of downregulates,how
R6348 T9796 T9795 arg2Of NF-κB,downregulates
R6349 T9799 T9785 arg1Of is,Although
R6350 T9799 T9797 arg1Of is,","
R6351 T9800 T9799 arg2Of noteworthy,is
R6352 T9802 T9803 arg1Of NF-κB,is
R6353 T9802 T9804 arg2Of NF-κB,activated
R6354 T9802 T9806 arg2Of NF-κB,inactivated
R6355 T9804 T9805 arg1Of activated,or
R6356 T9805 T9798 arg1Of or,it
R6357 T9805 T9799 arg1Of or,is
R6358 T9805 T9800 arg1Of or,noteworthy
R6359 T9805 T9801 arg1Of or,that
R6360 T9805 T9803 arg2Of or,is
R6361 T9806 T9805 arg2Of inactivated,or
R6362 T9809 T9804 arg1Of cytokines,activated
R6363 T9809 T9806 arg1Of cytokines,inactivated
R6364 T9809 T9807 arg2Of cytokines,by
R6365 T9809 T9808 arg1Of cytokines,many

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T9171 46-50 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T10879 46-50 http://www.uniprot.org/uniprot/P51681 denotes CCR5

sentences

Id Subject Object Predicate Lexical cue
T9021 0-149 Sentence denotes Although the mechanism is not clear as to how CCR5−/− downregulates NF-κB, it is noteworthy that NF-κB is activated or inactivated by many cytokines.
T163 0-149 Sentence denotes Although the mechanism is not clear as to how CCR5−/− downregulates NF-κB, it is noteworthy that NF-κB is activated or inactivated by many cytokines.

simple1

Id Subject Object Predicate Lexical cue
T9364 46-50 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T11011 54-67 Negative_regulation denotes downregulates
T10953 46-50 Protein denotes CCR5
R7343 T10953 T11011 themeOf CCR5,downregulates

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T11672 92-148 Positive_regulation denotes that NF-κB is activated or inactivated by many cytokines
T11638 131-148 Protein denotes by many cytokines
T11603 97-102 Protein denotes NF-κB
T11542 68-73 Protein denotes NF-κB
T11694 92-148 Negative_regulation denotes that NF-κB is activated or inactivated by many cytokines
R7569 T11638 T11694 causeOf by many cytokines,that NF-κB is activated or inactivated by many cytokines
R7584 T11603 T11672 themeOf NF-κB,that NF-κB is activated or inactivated by many cytokines
R7585 T11603 T11694 themeOf NF-κB,that NF-κB is activated or inactivated by many cytokines

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T12134 148-149 . denotes .
T12133 139-148 NNS denotes cytokines
T12132 134-138 JJ denotes many
T12131 131-133 IN denotes by
T12130 119-130 VBN denotes inactivated
T12129 116-118 CC denotes or
T12128 106-115 VBN denotes activated
T12127 103-105 VBZ denotes is
T12126 97-102 NNP denotes NF-κB
T12125 92-96 IN denotes that
T12124 81-91 JJ denotes noteworthy
T12123 78-80 VBZ denotes is
T12122 75-77 PRP denotes it
T12121 73-74 , denotes ,
T12120 68-73 NNP denotes NF-κB
T12119 54-67 VBZ denotes downregulates
T12118 52-53 NN denotes −
T12117 51-52 CD denotes /
T12116 50-51 VBD denotes −
T12115 46-50 NNP denotes CCR5
T12114 42-45 WRB denotes how
T12113 39-41 TO denotes to
T12112 36-38 IN denotes as
T12111 30-35 JJ denotes clear
T12110 26-29 RB denotes not
T12109 23-25 VBZ denotes is
T12108 13-22 NN denotes mechanism
T12107 9-12 DT denotes the
T12106 0-8 IN denotes Although
R7946 T12106 T12109 mark Although,is
R7947 T12107 T12108 det the,mechanism
R7949 T12108 T12109 nsubj mechanism,is
R7950 T12109 T12123 advcl is,is
R7951 T12110 T12111 neg not,clear
R7953 T12111 T12109 acomp clear,is
R7954 T12112 T12123 prep as,is
R7955 T12113 T12112 pcomp to,as
R7957 T12114 T12116 advmod how,−
R7961 T12115 T12116 nsubj CCR5,−
R7963 T12116 T12123 advcl −,is
R7964 T12117 T12119 nummod /,downregulates
R7968 T12118 T12119 compound −,downregulates
R7970 T12119 T12120 compound downregulates,NF-κB
R7971 T12120 T12116 dobj NF-κB,−
R7972 T12121 T12123 punct ",",is
R7974 T12122 T12123 nsubj it,is
R7975 T12123 T12123 ROOT is,is
R7976 T12124 T12123 acomp noteworthy,is
R7978 T12125 T12128 mark that,activated
R7979 T12126 T12128 nsubjpass NF-κB,activated
R7981 T12127 T12128 auxpass is,activated
R7982 T12128 T12123 ccomp activated,is
R7983 T12129 T12128 cc or,activated
R7985 T12130 T12128 conj inactivated,activated
R7986 T12131 T12130 agent by,inactivated
R7987 T12132 T12133 amod many,cytokines
R7988 T12133 T12131 pobj cytokines,by
R7989 T12134 T12123 punct .,is

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T11256 119-130 Positive_regulation denotes inactivated
T11255 106-115 Positive_regulation denotes activated
T11254 97-102 Protein denotes NF-κB
T11253 68-73 Protein denotes NF-κB
T11252 46-50 Protein denotes CCR5
R7457 T11254 T11255 themeOf NF-κB,activated
R7458 T11254 T11256 themeOf NF-κB,inactivated