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PMC:3342329 / 201-352 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T89 140-144 Protein denotes CCR5
T88 125-129 Protein denotes CCR5
T87 60-70 Gene_expression denotes expression
T86 54-58 Protein denotes CCR5
T85 23-52 Protein denotes C-C chemokine receptor type 5
T64 140-144 Protein denotes CCR5
T63 125-129 Protein denotes CCR5
T62 54-58 Protein denotes CCR5
T61 23-52 Protein denotes C-C chemokine receptor type 5
R17 T85 T87 themeOf C-C chemokine receptor type 5,expression
R18 T86 T85 equivalentTo CCR5,C-C chemokine receptor type 5

testone

Id Subject Object Predicate Lexical cue
T28 140-144 Protein denotes CCR5
T27 125-129 Protein denotes CCR5
T26 54-58 Protein denotes CCR5
T25 23-52 Protein denotes C-C chemokine receptor type 5
T47 60-70 Gene_expression denotes expression
R3 T25 T47 themeOf C-C chemokine receptor type 5,expression
R4 T26 T25 equivalentTo CCR5,C-C chemokine receptor type 5

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T640 60-70 Gene_expression denotes expression
T639 130-138 Negative_regulation denotes knockout
T620 140-144 Protein denotes CCR5
T619 125-129 Protein denotes CCR5
T618 54-58 Protein denotes CCR5
T617 23-52 Protein denotes C-C chemokine receptor type 5
R338 T617 T640 themeOf C-C chemokine receptor type 5,expression
R339 T618 T640 themeOf CCR5,expression
R340 T619 T639 themeOf CCR5,knockout
R341 T620 T639 themeOf CCR5,knockout

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T766 60-70 Gene_expression denotes expression
T765 130-138 Negative_regulation denotes knockout
T746 140-144 Protein denotes CCR5
T745 125-129 Protein denotes CCR5
T744 54-58 Protein denotes CCR5
T743 23-52 Protein denotes C-C chemokine receptor type 5
R407 T743 T766 themeOf C-C chemokine receptor type 5,expression
R408 T744 T766 themeOf CCR5,expression
R409 T745 T765 themeOf CCR5,knockout
R410 T746 T765 themeOf CCR5,knockout

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T301 122-124 IN denotes in
T300 115-121 NN denotes growth
T299 106-114 NN denotes melanoma
T298 97-105 VB denotes compared
T297 94-96 PRP denotes we
T296 92-93 -COMMA- denotes ,
T295 81-92 NN denotes development
T294 75-80 NN denotes tumor
T293 71-74 CC denotes and
T292 60-70 NN denotes expression
T291 58-59 -RRB- denotes )
T290 54-58 NN denotes CCR5
T289 53-54 -LRB- denotes (
T288 51-52 CD denotes 5
T287 46-50 NN denotes type
T286 37-45 NN denotes receptor
T285 27-36 NN denotes chemokine
T284 23-26 NN denotes C-C
T283 20-22 IN denotes of
T282 10-19 NN denotes relevance
T281 6-9 DT denotes the
T306 147-148 -RRB- denotes )
T305 140-147 NN denotes CCR5−/−
T304 139-140 -LRB- denotes (
T303 130-138 NN denotes knockout
T302 125-129 NN denotes CCR5
R63 T282 T281 arg1Of relevance,the
R64 T282 T283 arg1Of relevance,of
R65 T290 T289 arg2Of CCR5,(
R66 T291 T289 arg3Of ),(
R67 T292 T284 arg1Of expression,C-C
R68 T292 T285 arg1Of expression,chemokine
R69 T292 T286 arg1Of expression,receptor
R70 T292 T287 arg1Of expression,type
R71 T292 T288 arg1Of expression,5
R72 T292 T289 arg1Of expression,(
R73 T292 T293 arg1Of expression,and
R74 T293 T283 arg2Of and,of
R75 T295 T293 arg2Of development,and
R76 T295 T294 arg1Of development,tumor
R78 T297 T298 arg1Of we,compared
R80 T298 T296 arg1Of compared,","
R81 T300 T298 arg2Of growth,compared
R82 T300 T299 arg1Of growth,melanoma
R83 T300 T301 arg1Of growth,in
R84 T303 T302 arg1Of knockout,CCR5
R85 T303 T304 arg1Of knockout,(
R86 T305 T304 arg2Of CCR5−/−,(
R87 T306 T304 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T170 140-144 Protein denotes CCR5
T169 125-129 Protein denotes CCR5
T168 54-58 Protein denotes CCR5
T167 23-52 Protein denotes C-C chemokine receptor type 5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T536 140-144 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T535 125-129 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T534 54-58 http://www.uniprot.org/uniprot/P51681 denotes CCR5

GO-BP

Id Subject Object Predicate Lexical cue
T188 115-121 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T187 81-92 http://purl.obolibrary.org/obo/GO_0032502 denotes development

simple1

Id Subject Object Predicate Lexical cue
T243 140-144 Protein denotes CCR5
T242 125-129 Protein denotes CCR5
T241 54-58 Protein denotes CCR5
T240 23-52 Protein denotes C-C chemokine receptor type 5

DLUT931

Id Subject Object Predicate Lexical cue
T579 130-138 Negative_regulation denotes knockout
T578 60-70 Gene_expression denotes expression
T560 140-144 Protein denotes CCR5
T559 125-129 Protein denotes CCR5
T558 54-58 Protein denotes CCR5
T557 23-52 Protein denotes C-C chemokine receptor type 5
R314 T557 T578 themeOf C-C chemokine receptor type 5,expression
R315 T558 T578 themeOf CCR5,expression
R316 T559 T579 themeOf CCR5,knockout
R317 T560 T579 themeOf CCR5,knockout

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T809 54-58 Protein denotes CCR5
T790 27-36 Protein denotes chemokine
T787 46-59 Protein denotes type 5 (CCR5)
T786 125-129 Protein denotes CCR5
T773 23-70 Protein denotes C-C chemokine receptor type 5 (CCR5) expression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T871 147-148 -RRB- denotes )
T870 146-147 NN denotes −
T869 145-146 NN denotes /
T868 144-145 CD denotes −
T867 140-144 CD denotes CCR5
T866 139-140 -LRB- denotes (
T865 130-138 NN denotes knockout
T864 125-129 CD denotes CCR5
T863 122-124 IN denotes in
T862 115-121 NN denotes growth
T861 106-114 NN denotes melanoma
T860 97-105 VBD denotes compared
T859 94-96 PRP denotes we
T858 92-93 , denotes ,
T857 81-92 NN denotes development
T856 75-80 NN denotes tumor
T855 71-74 CC denotes and
T854 60-70 NN denotes expression
T853 58-59 -RRB- denotes )
T852 54-58 NNS denotes CCR5
T851 53-54 -LRB- denotes (
T843 6-9 DT denotes the
T850 51-52 CD denotes 5
T849 46-50 NN denotes type
T848 37-45 NN denotes receptor
T847 27-36 NN denotes chemokine
T846 23-26 NNP denotes C-C
T845 20-22 IN denotes of
T844 10-19 NN denotes relevance
R448 T843 T844 det the,relevance
R450 T845 T844 prep of,relevance
R451 T846 T849 compound C-C,type
R452 T847 T848 compound chemokine,receptor
R453 T848 T849 compound receptor,type
R454 T849 T845 pobj type,of
R455 T850 T849 nummod 5,type
R456 T851 T852 punct (,CCR5
R457 T852 T849 appos CCR5,type
R458 T853 T852 punct ),CCR5
R459 T854 T852 conj expression,CCR5
R460 T855 T854 cc and,expression
R461 T856 T857 compound tumor,development
R462 T857 T854 conj development,expression
R463 T858 T860 punct ",",compared
R464 T859 T860 nsubj we,compared
R465 T860 T860 ROOT compared,compared
R466 T861 T862 compound melanoma,growth
R467 T862 T860 dobj growth,compared
R468 T863 T862 prep in,growth
R469 T864 T865 nummod CCR5,knockout
R470 T865 T863 pobj knockout,in
R471 T866 T865 punct (,knockout
R472 T867 T868 nummod CCR5,−
R473 T868 T870 nummod −,−
R474 T869 T870 compound /,−
R475 T870 T865 appos −,knockout
R476 T871 T865 punct ),knockout

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T652 60-70 Gene_expression denotes expression
T651 60-70 Gene_expression denotes expression
T650 125-129 Protein denotes CCR5
T649 54-58 Protein denotes CCR5
T648 23-52 Protein denotes C-C chemokine receptor type 5
R349 T648 T651 themeOf C-C chemokine receptor type 5,expression
R350 T649 T652 themeOf CCR5,expression