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PMC:3342329 / 19287-19448 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T8914 134-140 Protein denotes IL-1Ra
T8913 101-110 Positive_regulation denotes activated
T8912 35-39 Protein denotes CCR5
T8851 134-140 Protein denotes IL-1Ra
T8850 35-39 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T8818 101-110 Positive_regulation denotes activated
T8817 72-82 Negative_regulation denotes inhibition
T8758 134-140 Protein denotes IL-1Ra
T8757 35-39 Protein denotes CCR5
R5872 T8758 T8818 themeOf IL-1Ra,activated

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T11113 134-140 Protein denotes IL-1Ra
T11112 35-39 Protein denotes CCR5
T11172 121-130 Positive_regulation denotes elevation
R7384 T11113 T11172 themeOf IL-1Ra,elevation

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T10785 134-140 Protein denotes IL-1Ra
T10784 35-39 Protein denotes CCR5
T10845 121-130 Positive_regulation denotes elevation
T10844 72-82 Negative_regulation denotes inhibition
R7304 T10785 T10845 themeOf IL-1Ra,elevation
R7328 T10845 T10844 themeOf elevation,inhibition

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9471 154-160 NN denotes tissue
T9470 148-153 NN denotes tumor
T9469 144-147 DT denotes the
T9468 141-143 IN denotes in
T9467 134-140 NN denotes IL-1Ra
T9466 131-133 IN denotes of
T9465 121-130 NN denotes elevation
T9464 117-120 CC denotes and
T9463 111-116 NN denotes NF-κB
T9462 101-110 VB denotes activated
T9461 86-100 RB denotes constitutively
T9460 83-85 IN denotes of
T9459 72-82 NN denotes inhibition
T9458 68-71 DT denotes the
T9457 63-67 IN denotes with
T9456 52-62 VB denotes associated
T9455 48-51 VB denotes was
T9454 43-47 NN denotes mice
T9453 35-42 NN denotes CCR5−/−
T9452 31-34 DT denotes the
T9451 28-30 IN denotes in
T9450 17-27 NN denotes inhibition
T9449 10-16 NN denotes growth
T9448 4-9 NN denotes tumor
T9447 0-3 DT denotes The
R5993 T9450 T9447 arg1Of inhibition,The
R5994 T9450 T9448 arg1Of inhibition,tumor
R5995 T9450 T9449 arg1Of inhibition,growth
R5996 T9450 T9451 arg1Of inhibition,in
R5997 T9450 T9455 arg1Of inhibition,was
R5998 T9450 T9456 arg2Of inhibition,associated
R5999 T9454 T9451 arg2Of mice,in
R6000 T9454 T9452 arg1Of mice,the
R6001 T9454 T9453 arg1Of mice,CCR5−/−
R6002 T9456 T9455 arg2Of associated,was
R6003 T9456 T9457 arg1Of associated,with
R6004 T9459 T9457 arg2Of inhibition,with
R6005 T9459 T9458 arg1Of inhibition,the
R6006 T9459 T9460 arg1Of inhibition,of
R6007 T9463 T9462 arg2Of NF-κB,activated
R6008 T9463 T9464 arg1Of NF-κB,and
R6009 T9464 T9460 arg2Of and,of
R6010 T9464 T9461 arg1Of and,constitutively
R6011 T9464 T9468 arg1Of and,in
R6012 T9465 T9464 arg2Of elevation,and
R6013 T9465 T9466 arg1Of elevation,of
R6014 T9467 T9466 arg2Of IL-1Ra,of
R6015 T9471 T9468 arg2Of tissue,in
R6016 T9471 T9469 arg1Of tissue,the
R6017 T9471 T9470 arg1Of tissue,tumor

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T9160 134-140 Protein denotes IL-1Ra
T9159 35-39 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T10903 134-140 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra
T10873 35-39 http://www.uniprot.org/uniprot/P51681 denotes CCR5

UBERON-AE

Id Subject Object Predicate Lexical cue
T9002 154-160 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

GO-BP

Id Subject Object Predicate Lexical cue
T9239 101-116 http://purl.obolibrary.org/obo/GO_0051092 denotes activated NF-κB
T9235 10-27 http://purl.obolibrary.org/obo/GO_0045926 denotes growth inhibition
T9219 10-16 http://purl.obolibrary.org/obo/GO_0040007 denotes growth

sentences

Id Subject Object Predicate Lexical cue
T9011 0-161 Sentence denotes The tumor growth inhibition in the CCR5−/− mice was associated with the inhibition of constitutively activated NF-κB and elevation of IL-1Ra in the tumor tissue.
T153 0-161 Sentence denotes The tumor growth inhibition in the CCR5−/− mice was associated with the inhibition of constitutively activated NF-κB and elevation of IL-1Ra in the tumor tissue.

simple1

Id Subject Object Predicate Lexical cue
T9353 134-140 Protein denotes IL-1Ra
T9352 35-39 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T11003 101-110 Positive_regulation denotes activated
T11002 121-130 Gene_expression denotes elevation
T11001 17-27 Negative_regulation denotes inhibition
T10942 134-140 Protein denotes IL-1Ra
T10941 35-39 Protein denotes CCR5
R7334 T10941 T11001 themeOf CCR5,inhibition
R7335 T10942 T11002 themeOf IL-1Ra,elevation
R7370 T11002 T11003 themeOf elevation,activated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T11676 86-116 Positive_regulation denotes constitutively activated NF-κB
T11622 86-116 Protein denotes constitutively activated NF-κB
T11614 131-140 Protein denotes of IL-1Ra
T11605 43-47 Protein denotes mice
R7562 T11622 T11676 themeOf constitutively activated NF-κB,constitutively activated NF-κB

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T11766 160-161 . denotes .
T11765 154-160 NN denotes tissue
T11764 148-153 NN denotes tumor
T11763 144-147 DT denotes the
T11762 141-143 IN denotes in
T11761 134-140 NN denotes IL-1Ra
T11760 131-133 IN denotes of
T11759 121-130 NN denotes elevation
T11758 117-120 CC denotes and
T11757 111-116 NNP denotes NF-κB
T11756 101-110 VBN denotes activated
T11755 86-100 RB denotes constitutively
T11754 83-85 IN denotes of
T11753 72-82 NN denotes inhibition
T11752 68-71 DT denotes the
T11751 63-67 IN denotes with
T11750 52-62 VBN denotes associated
T11749 48-51 VBD denotes was
T11748 43-47 NNS denotes mice
T11747 41-42 CD denotes −
T11746 40-41 VBD denotes /
T11745 39-40 NNP denotes −
T11744 35-39 NNP denotes CCR5
T11743 31-34 DT denotes the
T11742 28-30 IN denotes in
T11741 17-27 NN denotes inhibition
T11740 10-16 NN denotes growth
T11739 4-9 NN denotes tumor
T11738 0-3 DT denotes The
R7613 T11738 T11741 det The,inhibition
R7616 T11739 T11741 compound tumor,inhibition
R7621 T11740 T11741 compound growth,inhibition
R7623 T11741 T11746 nsubj inhibition,/
R7629 T11742 T11741 prep in,inhibition
R7633 T11743 T11745 det the,−
R7634 T11744 T11745 compound CCR5,−
R7635 T11745 T11742 pobj −,in
R7636 T11746 T11746 ROOT /,/
R7637 T11747 T11748 nummod −,mice
R7640 T11748 T11750 nsubjpass mice,associated
R7643 T11749 T11750 auxpass was,associated
R7646 T11750 T11746 conj associated,/
R7649 T11751 T11750 prep with,associated
R7653 T11752 T11753 det the,inhibition
R7658 T11753 T11751 pobj inhibition,with
R7663 T11754 T11753 prep of,inhibition
R7667 T11755 T11756 advmod constitutively,activated
R7672 T11756 T11757 amod activated,NF-κB
R7675 T11757 T11754 pobj NF-κB,of
R7678 T11758 T11753 cc and,inhibition
R7683 T11759 T11753 conj elevation,inhibition
R7691 T11760 T11759 prep of,elevation
R7692 T11761 T11760 pobj IL-1Ra,of
R7693 T11762 T11753 prep in,inhibition
R7696 T11763 T11765 det the,tissue
R7699 T11764 T11765 compound tumor,tissue
R7704 T11765 T11762 pobj tissue,in
R7707 T11766 T11750 punct .,associated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T11202 101-110 Positive_regulation denotes activated
T11201 72-82 Negative_regulation denotes inhibition
T11200 121-130 Localization denotes elevation
T11199 101-110 Positive_regulation denotes activated
T11198 134-140 Protein denotes IL-1Ra
T11197 111-116 Protein denotes NF-κB
R7401 T11197 T11199 themeOf NF-κB,activated
R7406 T11198 T11200 themeOf IL-1Ra,elevation
R7408 T11199 T11201 themeOf activated,inhibition
R7409 T11200 T11202 themeOf elevation,activated