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PMC:3342329 / 18685-18891 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T7327 181-185 Protein denotes CCR5
T7326 55-59 Protein denotes CCR5
T7325 14-17 Protein denotes CD4
T7306 181-185 Protein denotes CCR5
T7305 55-59 Protein denotes CCR5
T7304 14-17 Protein denotes CD4

testone

Id Subject Object Predicate Lexical cue
T7285 181-185 Protein denotes CCR5
T7284 55-59 Protein denotes CCR5
T7283 14-17 Protein denotes CD4

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8030 181-185 Protein denotes CCR5
T8029 55-59 Protein denotes CCR5
T8028 14-17 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7907 181-185 Protein denotes CCR5
T7906 55-59 Protein denotes CCR5
T7905 14-17 Protein denotes CD4

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7829 204-205 -RRB- denotes )
T7828 202-204 NN denotes 5D
T7827 195-201 NN denotes Figure
T7826 194-195 -LRB- denotes (
T7825 189-193 NN denotes mice
T7824 181-188 JJ denotes CCR5+/+
T7823 177-180 DT denotes the
T7822 174-176 IN denotes of
T7821 172-173 NN denotes %
T7820 169-172 CD denotes 3.9
T7819 165-168 CC denotes and
T7818 163-164 NN denotes %
T7817 160-163 CD denotes 1.0
T7816 158-159 -COMMA- denotes ,
T7815 157-158 NN denotes %
T7814 154-157 CD denotes 4.0
T7813 152-153 -COMMA- denotes ,
T7812 151-152 NN denotes %
T7811 148-151 CD denotes 5.9
T7810 146-147 -COMMA- denotes ,
T7809 145-146 NN denotes %
T7808 141-145 CD denotes 38.3
T7807 138-140 TO denotes to
T7806 129-137 VB denotes compared
T7805 116-128 RB denotes respectively
T7804 114-115 -COMMA- denotes ,
T7803 113-114 NN denotes %
T7802 110-113 CD denotes 0.6
T7801 106-109 CC denotes and
T7800 104-105 NN denotes %
T7799 101-104 CD denotes 9.2
T7798 99-100 -COMMA- denotes ,
T7797 98-99 NN denotes %
T7796 94-98 CD denotes 17.6
T7795 92-93 -COMMA- denotes ,
T7794 91-92 NN denotes %
T7793 87-91 CD denotes 33.4
T7792 85-86 -COMMA- denotes ,
T7791 84-85 NN denotes %
T7790 80-84 CD denotes 61.3
T7789 75-79 VB denotes were
T7788 68-74 NN denotes spleen
T7787 63-67 NN denotes mice
T7786 55-62 NN denotes CCR5−/−
T7785 51-54 DT denotes the
T7784 48-50 IN denotes of
T7783 40-47 NN denotes portion
T7782 35-39 NN denotes cell
T7781 32-34 NN denotes NK
T7780 28-31 CC denotes and
T7779 26-27 NN denotes T
T7778 24-25 CD denotes 8
T7777 21-23 NN denotes CD
T7776 19-20 -COMMA- denotes ,
T7775 18-19 NN denotes T
T7774 14-17 NN denotes CD4
T7773 12-13 -COMMA- denotes ,
T7772 11-12 NNP denotes T
T7771 7-10 NN denotes CD3
T7770 5-6 -COMMA- denotes ,
T7769 4-5 NN denotes B
T7768 0-3 DT denotes The
R5250 T7769 T7768 arg1Of B,The
R5251 T7769 T7770 arg1Of B,","
R5252 T7769 T7773 arg1Of B,","
R5253 T7769 T7776 arg1Of B,","
R5254 T7772 T7770 arg2Of T,","
R5255 T7772 T7771 arg1Of T,CD3
R5256 T7775 T7773 arg2Of T,","
R5257 T7775 T7774 arg1Of T,CD4
R5258 T7776 T7789 arg1Of ",",were
R5259 T7779 T7780 arg1Of T,and
R5260 T7781 T7780 arg2Of NK,and
R5261 T7783 T7776 arg2Of portion,","
R5262 T7783 T7777 arg1Of portion,CD
R5263 T7783 T7778 arg1Of portion,8
R5264 T7783 T7779 arg1Of portion,T
R5265 T7783 T7781 arg1Of portion,NK
R5266 T7783 T7782 arg1Of portion,cell
R5267 T7783 T7784 arg1Of portion,of
R5268 T7788 T7784 arg2Of spleen,of
R5269 T7788 T7785 arg1Of spleen,the
R5270 T7788 T7786 arg1Of spleen,CCR5−/−
R5271 T7788 T7787 arg1Of spleen,mice
R5272 T7789 T7806 arg1Of were,compared
R5273 T7791 T7790 arg1Of %,61.3
R5274 T7791 T7792 arg1Of %,","
R5275 T7792 T7795 arg1Of ",",","
R5276 T7794 T7792 arg2Of %,","
R5277 T7794 T7793 arg1Of %,33.4
R5278 T7795 T7798 arg1Of ",",","
R5279 T7797 T7795 arg2Of %,","
R5280 T7797 T7796 arg1Of %,17.6
R5281 T7798 T7789 arg2Of ",",were
R5282 T7798 T7804 arg1Of ",",","
R5283 T7798 T7805 arg1Of ",",respectively
R5284 T7800 T7799 arg1Of %,9.2
R5285 T7800 T7801 arg1Of %,and
R5286 T7802 T7801 arg2Of 0.6,and
R5287 T7803 T7798 arg2Of %,","
R5288 T7803 T7800 arg1Of %,%
R5289 T7803 T7802 arg1Of %,0.6
R5290 T7807 T7806 arg2Of to,compared
R5291 T7809 T7808 arg1Of %,38.3
R5292 T7809 T7810 arg1Of %,","
R5293 T7810 T7813 arg1Of ",",","
R5294 T7812 T7810 arg2Of %,","
R5295 T7812 T7811 arg1Of %,5.9
R5296 T7813 T7816 arg1Of ",",","
R5297 T7815 T7813 arg2Of %,","
R5298 T7815 T7814 arg1Of %,4.0
R5299 T7816 T7807 arg2Of ",",to
R5300 T7818 T7817 arg1Of %,1.0
R5301 T7818 T7819 arg1Of %,and
R5302 T7820 T7819 arg2Of 3.9,and
R5303 T7821 T7816 arg2Of %,","
R5304 T7821 T7818 arg1Of %,%
R5305 T7821 T7820 arg1Of %,3.9
R5306 T7821 T7822 arg1Of %,of
R5307 T7825 T7822 arg2Of mice,of
R5308 T7825 T7823 arg1Of mice,the
R5309 T7825 T7824 arg1Of mice,CCR5+/+
R5310 T7825 T7826 arg1Of mice,(
R5311 T7828 T7826 arg2Of 5D,(
R5312 T7828 T7827 arg1Of 5D,Figure
R5313 T7829 T7826 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7394 181-185 Protein denotes CCR5
T7393 55-59 Protein denotes CCR5
T7392 14-17 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7960 14-17 http://www.uniprot.org/uniprot/P01730 denotes CD4
T7957 7-10 http://www.uniprot.org/uniprot/P09693 denotes CD3
T7954 7-10 http://www.uniprot.org/uniprot/P07766 denotes CD3
T7951 7-10 http://www.uniprot.org/uniprot/P04234 denotes CD3
T7948 7-10 http://www.uniprot.org/uniprot/P20963 denotes CD3
T7944 181-185 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T7943 55-59 http://www.uniprot.org/uniprot/P51681 denotes CCR5

UBERON-AE

Id Subject Object Predicate Lexical cue
T7335 68-74 http://purl.obolibrary.org/obo/UBERON_0002106 denotes spleen

sentences

Id Subject Object Predicate Lexical cue
T7352 0-206 Sentence denotes The B, CD3 T, CD4 T, CD 8 T and NK cell portion of the CCR5−/− mice spleen were 61.3%, 33.4%, 17.6%, 9.2% and 0.6%, respectively compared to 38.3%, 5.9%, 4.0%, 1.0% and 3.9% of the CCR5+/+ mice (Figure 5D).
T149 0-206 Sentence denotes The B, CD3 T, CD4 T, CD 8 T and NK cell portion of the CCR5−/− mice spleen were 61.3%, 33.4%, 17.6%, 9.2% and 0.6%, respectively compared to 38.3%, 5.9%, 4.0%, 1.0% and 3.9% of the CCR5+/+ mice (Figure 5D).

simple1

Id Subject Object Predicate Lexical cue
T7432 181-185 Protein denotes CCR5
T7431 55-59 Protein denotes CCR5
T7430 14-17 Protein denotes CD4

DLUT931

Id Subject Object Predicate Lexical cue
T7984 181-185 Protein denotes CCR5
T7983 55-59 Protein denotes CCR5
T7982 14-17 Protein denotes CD4

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8664 169-205 Protein denotes 3.9% of the CCR5+/+ mice (Figure 5D)
T8661 14-17 Protein denotes CD4
T8657 7-10 Protein denotes CD3
T8648 14-19 Entity denotes CD4 T
T8628 7-12 Entity denotes CD3 T
T8617 26-27 Entity denotes T
T8615 32-62 Entity denotes NK cell portion of the CCR5−/−
T8609 63-67 Protein denotes mice
T8607 174-205 Protein denotes of the CCR5+/+ mice (Figure 5D)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8564 205-206 . denotes .
T8563 204-205 -RRB- denotes )
T8562 202-204 CD denotes 5D
T8561 195-201 NN denotes Figure
T8538 138-140 TO denotes to
T8537 129-137 VBN denotes compared
T8536 116-128 RB denotes respectively
T8535 114-115 , denotes ,
T8534 113-114 NN denotes %
T8533 110-113 CD denotes 0.6
T8532 106-109 CC denotes and
T8531 104-105 NN denotes %
T8530 101-104 CD denotes 9.2
T8529 99-100 , denotes ,
T8528 98-99 NN denotes %
T8527 94-98 CD denotes 17.6
T8526 92-93 , denotes ,
T8525 91-92 NN denotes %
T8524 87-91 CD denotes 33.4
T8523 85-86 , denotes ,
T8522 84-85 NN denotes %
T8521 80-84 CD denotes 61.3
T8520 75-79 VBD denotes were
T8519 68-74 VBP denotes spleen
T8518 63-67 NNS denotes mice
T8517 61-62 NN denotes −
T8516 60-61 CD denotes /
T8515 59-60 CD denotes −
T8514 55-59 NNP denotes CCR5
T8513 51-54 DT denotes the
T8512 48-50 IN denotes of
T8511 40-47 NN denotes portion
T8510 35-39 NN denotes cell
T8509 32-34 NNP denotes NK
T8508 28-31 CC denotes and
T8507 26-27 NNP denotes T
T8506 24-25 CD denotes 8
T8505 21-23 NNP denotes CD
T8504 19-20 , denotes ,
T8503 18-19 NNP denotes T
T8502 14-17 NNP denotes CD4
T8501 12-13 , denotes ,
T8500 11-12 NNP denotes T
T8499 7-10 NNP denotes CD3
T8498 5-6 , denotes ,
T8497 4-5 NNP denotes B
T8496 0-3 DT denotes The
T8560 194-195 -LRB- denotes (
T8559 189-193 NNS denotes mice
T8558 187-188 CD denotes +
T8557 186-187 VBD denotes /
T8556 185-186 NNP denotes +
T8555 181-185 NNP denotes CCR5
T8554 177-180 DT denotes the
T8553 174-176 IN denotes of
T8552 172-173 NN denotes %
T8551 169-172 CD denotes 3.9
T8550 165-168 CC denotes and
T8549 163-164 NN denotes %
T8548 160-163 CD denotes 1.0
T8547 158-159 , denotes ,
T8546 157-158 NN denotes %
T8545 154-157 CD denotes 4.0
T8544 152-153 , denotes ,
T8543 151-152 NN denotes %
T8542 148-151 CD denotes 5.9
T8541 146-147 , denotes ,
T8540 145-146 NN denotes %
T8539 141-145 CD denotes 38.3
R5761 T8496 T8497 det The,B
R5762 T8497 T8511 poss B,portion
R5763 T8498 T8497 punct ",",B
R5764 T8499 T8500 compound CD3,T
R5765 T8500 T8497 appos T,B
R5766 T8501 T8500 punct ",",T
R5767 T8502 T8503 compound CD4,T
R5768 T8503 T8497 appos T,B
R5769 T8504 T8503 punct ",",T
R5770 T8505 T8503 appos CD,T
R5771 T8506 T8507 nummod 8,T
R5772 T8507 T8497 conj T,B
R5773 T8508 T8507 cc and,T
R5774 T8509 T8507 conj NK,T
R5775 T8510 T8511 compound cell,portion
R5776 T8511 T8520 nsubj portion,were
R5777 T8512 T8511 prep of,portion
R5778 T8513 T8519 det the,spleen
R5779 T8514 T8519 compound CCR5,spleen
R5780 T8515 T8518 nummod −,mice
R5781 T8516 T8518 nummod /,mice
R5782 T8517 T8518 compound −,mice
R5783 T8518 T8519 compound mice,spleen
R5784 T8519 T8512 pobj spleen,of
R5785 T8520 T8520 ROOT were,were
R5786 T8521 T8522 nummod 61.3,%
R5787 T8522 T8520 attr %,were
R5788 T8523 T8522 punct ",",%
R5789 T8524 T8525 nummod 33.4,%
R5790 T8525 T8522 appos %,%
R5791 T8526 T8525 punct ",",%
R5792 T8527 T8528 nummod 17.6,%
R5793 T8528 T8525 conj %,%
R5794 T8529 T8528 punct ",",%
R5795 T8530 T8531 nummod 9.2,%
R5796 T8531 T8528 conj %,%
R5797 T8532 T8531 cc and,%
R5798 T8533 T8534 nummod 0.6,%
R5799 T8534 T8531 conj %,%
R5800 T8535 T8522 punct ",",%
R5801 T8536 T8537 advmod respectively,compared
R5802 T8537 T8520 prep compared,were
R5803 T8538 T8537 prep to,compared
R5804 T8539 T8540 nummod 38.3,%
R5805 T8540 T8538 pobj %,to
R5806 T8541 T8540 punct ",",%
R5807 T8542 T8543 nummod 5.9,%
R5808 T8543 T8557 nsubj %,/
R5809 T8544 T8543 punct ",",%
R5810 T8545 T8546 nummod 4.0,%
R5811 T8546 T8543 conj %,%
R5812 T8547 T8546 punct ",",%
R5813 T8548 T8549 nummod 1.0,%
R5814 T8549 T8546 conj %,%
R5815 T8550 T8549 cc and,%
R5816 T8551 T8552 nummod 3.9,%
R5817 T8552 T8549 conj %,%
R5818 T8553 T8552 prep of,%
R5819 T8554 T8556 det the,+
R5820 T8555 T8556 compound CCR5,+
R5821 T8556 T8553 pobj +,of
R5822 T8557 T8520 conj /,were
R5823 T8558 T8559 nummod +,mice
R5824 T8559 T8557 dobj mice,/
R5825 T8560 T8561 punct (,Figure
R5826 T8561 T8559 appos Figure,mice
R5827 T8562 T8561 nummod 5D,Figure
R5828 T8563 T8561 punct ),Figure
R5829 T8564 T8557 punct .,/

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T8065 181-185 Protein denotes CCR5
T8064 21-25 Protein denotes CD 8
T8063 14-19 Protein denotes CD4 T
T8062 7-12 Protein denotes CD3 T