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PMC:3342329 / 1413-1618 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T109 164-168 Protein denotes CCR5
T108 113-117 Protein denotes CCR5
T107 80-84 Protein denotes CCR5
T79 164-168 Protein denotes CCR5
T78 113-117 Protein denotes CCR5
T77 80-84 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T41 80-84 Protein denotes CCR5
T56 169-179 Negative_regulation denotes deficiency
T43 164-168 Protein denotes CCR5
T42 113-117 Protein denotes CCR5
R9 T43 T56 themeOf CCR5,deficiency

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T646 169-179 Negative_regulation denotes deficiency
T635 164-168 Protein denotes CCR5
T634 113-117 Protein denotes CCR5
T633 80-84 Protein denotes CCR5
R347 T635 T646 themeOf CCR5,deficiency

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T772 169-179 Negative_regulation denotes deficiency
T761 164-168 Protein denotes CCR5
T760 113-117 Protein denotes CCR5
T759 80-84 Protein denotes CCR5
R416 T761 T772 themeOf CCR5,deficiency

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T519 197-201 NN denotes cell
T518 187-196 JJ denotes apoptotic
T517 180-186 VB denotes caused
T516 169-179 NN denotes deficiency
T515 164-168 NN denotes CCR5
T514 159-163 IN denotes that
T513 152-158 VB denotes showed
T512 144-151 NN denotes results
T511 138-143 DT denotes these
T510 136-137 -COMMA- denotes ,
T509 127-136 RB denotes Therefore
T508 121-125 NN denotes mice
T507 113-120 JJ denotes CCR5+/+
T506 110-112 IN denotes of
T505 105-109 DT denotes that
T504 102-104 TO denotes to
T503 93-101 VB denotes compared
T502 88-92 NN denotes mice
T501 80-87 NN denotes CCR5−/−
T500 77-79 IN denotes of
T499 70-76 NN denotes tissue
T498 63-69 NN denotes spleen
T497 59-62 CC denotes and
T496 53-58 NN denotes tumor
T495 44-52 NN denotes melanoma
T494 41-43 IN denotes in
T493 31-40 VB denotes increased
T492 17-30 RB denotes significantly
T491 13-16 VB denotes was
T490 7-12 NN denotes cells
T489 0-6 NN denotes killer
R271 T490 T489 arg1Of cells,killer
R274 T493 T491 arg2Of increased,was
R275 T493 T492 arg1Of increased,significantly
R276 T493 T494 arg1Of increased,in
R277 T496 T497 arg1Of tumor,and
R278 T498 T497 arg2Of spleen,and
R279 T499 T494 arg2Of tissue,in
R280 T499 T495 arg1Of tissue,melanoma
R281 T499 T496 arg1Of tissue,tumor
R282 T499 T498 arg1Of tissue,spleen
R283 T499 T500 arg1Of tissue,of
R284 T502 T500 arg2Of mice,of
R285 T502 T501 arg1Of mice,CCR5−/−
R286 T502 T503 arg2Of mice,compared
R287 T503 T504 arg1Of compared,to
R288 T505 T504 arg2Of that,to
R289 T505 T506 arg1Of that,of
R290 T508 T506 arg2Of mice,of
R291 T508 T507 arg1Of mice,CCR5+/+
R292 T512 T511 arg1Of results,these
R293 T512 T513 arg1Of results,showed
R294 T513 T509 arg1Of showed,Therefore
R295 T513 T510 arg1Of showed,","
R296 T516 T515 arg1Of deficiency,CCR5
R297 T516 T517 arg1Of deficiency,caused
R298 T517 T513 arg2Of caused,showed
R299 T517 T514 arg1Of caused,that

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T185 164-168 Protein denotes CCR5
T184 113-117 Protein denotes CCR5
T183 80-84 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T547 164-168 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T546 113-117 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T545 80-84 http://www.uniprot.org/uniprot/P51681 denotes CCR5

UBERON-AE

Id Subject Object Predicate Lexical cue
T119 63-69 http://purl.obolibrary.org/obo/UBERON_0002106 denotes spleen
T117 70-76 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

GO-CC

Id Subject Object Predicate Lexical cue
T212 197-201 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

simple1

Id Subject Object Predicate Lexical cue
T258 164-168 Protein denotes CCR5
T257 113-117 Protein denotes CCR5
T256 80-84 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T585 169-179 Negative_regulation denotes deficiency
T575 164-168 Protein denotes CCR5
T574 113-117 Protein denotes CCR5
T573 80-84 Protein denotes CCR5
R322 T575 T585 themeOf CCR5,deficiency

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T803 121-125 Protein denotes mice
T789 113-117 Protein denotes CCR5
T785 88-92 Protein denotes mice
T781 164-179 Protein denotes CCR5 deficiency

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1123 197-201 NN denotes cell
T1122 187-196 JJ denotes apoptotic
T1121 180-186 VBD denotes caused
T1120 169-179 NN denotes deficiency
T1119 164-168 CD denotes CCR5
T1118 159-163 IN denotes that
T1117 152-158 VBD denotes showed
T1116 144-151 NNS denotes results
T1115 138-143 DT denotes these
T1114 136-137 , denotes ,
T1113 127-136 RB denotes Therefore
T1112 125-126 . denotes .
T1111 121-125 NNS denotes mice
T1110 119-120 NN denotes +
T1109 118-119 NN denotes /
T1108 117-118 CD denotes +
T1107 113-117 CD denotes CCR5
T1106 110-112 IN denotes of
T1105 105-109 DT denotes that
T1104 102-104 TO denotes to
T1103 93-101 VBN denotes compared
T1102 88-92 NNS denotes mice
T1101 86-87 NN denotes −
T1100 85-86 NN denotes /
T1099 84-85 CD denotes −
T1098 80-84 CD denotes CCR5
T1097 77-79 IN denotes of
T1096 70-76 NN denotes tissue
T1095 63-69 NN denotes spleen
T1094 59-62 CC denotes and
T1093 53-58 NN denotes tumor
T1092 44-52 NN denotes melanoma
T1091 41-43 IN denotes in
T1090 31-40 VBN denotes increased
T1089 17-30 RB denotes significantly
T1088 13-16 VBD denotes was
T1087 7-12 NNS denotes cells
T1086 0-6 NN denotes killer
R692 T1086 T1087 compound killer,cells
R693 T1087 T1090 nsubjpass cells,increased
R695 T1088 T1090 auxpass was,increased
R696 T1089 T1090 advmod significantly,increased
R697 T1090 T1090 ROOT increased,increased
R698 T1091 T1090 prep in,increased
R700 T1092 T1093 compound melanoma,tumor
R701 T1093 T1091 pobj tumor,in
R702 T1094 T1093 cc and,tumor
R704 T1095 T1096 compound spleen,tissue
R705 T1096 T1093 conj tissue,tumor
R706 T1097 T1096 prep of,tissue
R707 T1098 T1102 nummod CCR5,mice
R708 T1099 T1102 nummod −,mice
R709 T1100 T1102 compound /,mice
R711 T1101 T1102 compound −,mice
R712 T1102 T1097 pobj mice,of
R713 T1103 T1090 prep compared,increased
R714 T1104 T1103 prep to,compared
R716 T1105 T1104 pobj that,to
R717 T1106 T1105 prep of,that
R718 T1107 T1111 nummod CCR5,mice
R719 T1108 T1111 nummod +,mice
R720 T1109 T1111 compound /,mice
R721 T1110 T1111 compound +,mice
R722 T1111 T1106 pobj mice,of
R723 T1112 T1090 punct .,increased
R724 T1113 T1117 advmod Therefore,showed
R725 T1114 T1117 punct ",",showed
R726 T1115 T1116 det these,results
R727 T1116 T1117 nsubj results,showed
R728 T1117 T1117 ROOT showed,showed
R729 T1118 T1121 mark that,caused
R730 T1119 T1120 amod CCR5,deficiency
R731 T1120 T1121 nsubj deficiency,caused
R732 T1121 T1117 ccomp caused,showed

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T690 169-179 Negative_regulation denotes deficiency
T687 164-168 Protein denotes CCR5
T686 113-117 Protein denotes CCR5
R371 T687 T690 themeOf CCR5,deficiency