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PMC:3342329 / 11228-12481 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T18194 1239-1243 Protein denotes CCR5
T18188 1239-1243 Protein denotes CCR5
T5954 1107-1111 Protein denotes CCR5
T5953 1094-1103 Negative_regulation denotes decreased
T5952 1068-1074 Protein denotes C-IAP1
T5951 822-826 Protein denotes CCR5
T5950 797-801 Protein denotes CCR5
T5949 641-645 Protein denotes CCR5
T5948 611-615 Protein denotes CCR5
T5947 461-465 Protein denotes CCR5
T5946 449-453 Protein denotes CCR5
T5945 97-101 Protein denotes CCR5
T5944 1107-1111 Protein denotes CCR5
T5943 1068-1074 Protein denotes C-IAP1
T5942 822-826 Protein denotes CCR5
T5941 797-801 Protein denotes CCR5
T5940 641-645 Protein denotes CCR5
T5939 611-615 Protein denotes CCR5
T5938 461-465 Protein denotes CCR5
T5937 449-453 Protein denotes CCR5
T5936 97-101 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T18179 1239-1243 Protein denotes CCR5
T5935 1094-1103 Negative_regulation denotes decreased
T5934 1014-1021 Phosphorylation denotes cleaved
T5933 995-1002 Phosphorylation denotes cleaved
T5932 976-983 Phosphorylation denotes cleaved
T5931 956-965 Positive_regulation denotes increased
T5930 737-744 Phosphorylation denotes cleaved
T5929 1107-1111 Protein denotes CCR5
T5928 1068-1074 Protein denotes C-IAP1
T5927 822-826 Protein denotes CCR5
T5926 797-801 Protein denotes CCR5
T5925 641-645 Protein denotes CCR5
T5924 611-615 Protein denotes CCR5
T5923 461-465 Protein denotes CCR5
T5922 449-453 Protein denotes CCR5
T5921 97-101 Protein denotes CCR5
R4054 T5928 T5935 themeOf C-IAP1,decreased
R4055 T5932 T5931 themeOf cleaved,increased
R4056 T5933 T5931 themeOf cleaved,increased
R4057 T5934 T5931 themeOf cleaved,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T18494 1239-1243 Protein denotes CCR5
T6265 1094-1103 Negative_regulation denotes decreased
T6264 1107-1111 Protein denotes CCR5
T6263 1068-1074 Protein denotes C-IAP1
T6262 822-826 Protein denotes CCR5
T6261 797-801 Protein denotes CCR5
T6260 641-645 Protein denotes CCR5
T6259 611-615 Protein denotes CCR5
T6258 461-465 Protein denotes CCR5
T6257 449-453 Protein denotes CCR5
T6256 97-101 Protein denotes CCR5
R4248 T6263 T6265 themeOf C-IAP1,decreased

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6219 797-801 Protein denotes CCR5
T6218 641-645 Protein denotes CCR5
T6217 611-615 Protein denotes CCR5
T6216 461-465 Protein denotes CCR5
T6215 449-453 Protein denotes CCR5
T6214 97-101 Protein denotes CCR5
T6223 1094-1103 Negative_regulation denotes decreased
T6222 1107-1111 Protein denotes CCR5
T6221 1068-1074 Protein denotes C-IAP1
T6220 822-826 Protein denotes CCR5
T18464 1239-1243 Protein denotes CCR5
R4244 T6221 T6223 themeOf C-IAP1,decreased

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T18260 1248-1252 NN denotes mice
T18259 1244-1247 NN denotes −/−
T18258 1239-1243 NN denotes CCR5
T18257 1236-1238 IN denotes of
T18256 1228-1235 NN denotes tissues
T18255 1222-1227 NN denotes tumor
T18254 1219-1221 IN denotes in
T18253 28-33 NN denotes Death
T18252 23-27 NN denotes Cell
T18251 13-22 JJ denotes Apoptotic
T18250 10-12 IN denotes of
T18249 0-9 NN denotes Induction
T6191 1014-1021 VB denotes cleaved
T6190 1012-1013 -COMMA- denotes ,
T6189 1003-1012 NN denotes caspase-9
T6188 995-1002 VB denotes cleaved
T6187 993-994 -COMMA- denotes ,
T6186 984-993 NN denotes caspase-3
T6185 976-983 VB denotes cleaved
T6184 973-975 IN denotes of
T6183 966-972 NN denotes levels
T6182 956-965 VB denotes increased
T6181 948-955 JJ denotes greater
T6180 941-947 VB denotes showed
T6179 932-940 NN denotes proteins
T6178 926-931 NN denotes tumor
T6177 923-925 IN denotes of
T6176 914-922 NN denotes analysis
T6175 909-913 NN denotes blot
T6174 901-908 JJ denotes Western
T6173 899-900 -COMMA- denotes ,
T6172 895-899 NN denotes data
T6171 875-894 JJ denotes immunohistochemical
T6170 871-874 DT denotes the
T6169 866-870 IN denotes with
T6168 855-865 JJ denotes Consistent
T6167 852-853 -RRB- denotes )
T6166 850-852 NN denotes 3C
T6165 846-849 CC denotes and
T6164 843-845 NN denotes 3B
T6163 836-842 NN denotes Figure
T6162 835-836 -LRB- denotes (
T6161 830-834 NN denotes mice
T6160 822-829 JJ denotes CCR5+/+
T6159 818-821 DT denotes the
T6158 815-817 IN denotes in
T6157 810-814 IN denotes than
T6156 805-809 NN denotes mice
T6155 797-804 NN denotes CCR5−/−
T6154 793-796 DT denotes the
T6153 790-792 IN denotes in
T6152 779-789 RB denotes frequently
T6151 774-778 RB denotes more
T6150 768-773 VB denotes found
T6149 763-767 VB denotes were
T6148 759-762 NN denotes Bax
T6147 755-758 CC denotes and
T6146 745-754 NN denotes caspase-3
T6145 737-744 VB denotes cleaved
T6144 734-736 IN denotes of
T6143 727-733 NN denotes levels
T6142 722-726 JJ denotes high
T6141 717-721 IN denotes that
T6140 710-716 VB denotes showed
T6139 691-709 NN denotes immunofluorescence
T6138 687-690 CC denotes and
T6137 667-686 JJ denotes Immunohistochemical
T6136 664-665 -RRB- denotes )
T6135 662-664 NN denotes 3A
T6134 655-661 NN denotes Figure
T6133 654-655 -LRB- denotes (
T6132 649-653 NN denotes mice
T6131 641-648 JJ denotes CCR5+/+
T6130 637-640 DT denotes the
T6129 634-636 IN denotes of
T6128 629-633 DT denotes that
T6127 624-628 IN denotes than
T6126 619-623 NN denotes mice
T6125 611-618 NN denotes CCR5−/−
T6124 607-610 DT denotes the
T6123 604-606 IN denotes of
T6122 596-603 NN denotes tissues
T6121 590-595 NN denotes tumor
T6120 586-589 DT denotes the
T6119 583-585 IN denotes in
T6118 577-582 NN denotes death
T6117 572-576 NN denotes cell
T6116 562-571 JJ denotes apoptotic
T6115 559-561 IN denotes of
T6114 549-558 NN denotes frequency
T6113 542-548 JJ denotes higher
T6112 540-541 DT denotes a
T6111 531-539 VB denotes revealed
T6110 522-530 NN denotes staining
T6109 516-521 NN denotes TUNEL
T6108 509-514 NN denotes cells
T6107 500-508 NN denotes melanoma
T6106 495-499 IN denotes with
T6105 484-494 VB denotes inoculated
T6104 479-483 VB denotes were
T6103 474-478 WDT denotes that
T6102 469-473 NN denotes mice
T6101 461-468 NN denotes CCR5−/−
T6100 457-460 CC denotes and
T6099 449-456 NN denotes CCR5+/+
T6098 445-448 DT denotes the
T6097 442-444 IN denotes in
T6096 432-441 VB denotes evaluated
T6095 427-431 VB denotes were
T6094 418-426 NN denotes sections
T6093 412-417 NN denotes tumor
T6092 408-411 DT denotes the
T6091 405-407 IN denotes in
T6090 399-404 NN denotes death
T6089 394-398 NN denotes cell
T6088 384-393 JJ denotes Apoptotic
T6087 374-382 VB denotes assessed
T6086 369-373 VB denotes were
T6085 360-368 NN denotes proteins
T6084 349-359 JJ denotes regulatory
T6083 343-348 NN denotes death
T6082 338-342 NN denotes cell
T6081 328-337 JJ denotes apoptotic
T6080 325-327 IN denotes of
T6079 314-324 NN denotes expression
T6078 310-313 CC denotes and
T6077 304-309 NN denotes death
T6076 299-303 NN denotes cell
T6075 289-298 JJ denotes apoptotic
T6074 286-288 IN denotes of
T6073 279-285 NN denotes levels
T6072 275-278 DT denotes the
T6071 273-274 -COMMA- denotes ,
T6070 266-273 NN denotes protein
T6069 255-265 JJ denotes regulatory
T6068 249-254 NN denotes death
T6067 244-248 NN denotes cell
T6066 234-243 JJ denotes apoptotic
T6065 227-233 NN denotes target
T6064 221-226 NN denotes NF-κB
T6063 218-220 IN denotes of
T6062 207-217 NN denotes expression
T6061 203-206 CC denotes and
T6060 197-202 NN denotes death
T6059 192-196 NN denotes cell
T6058 182-191 JJ denotes apoptotic
T6057 179-181 IN denotes of
T6056 169-178 NN denotes induction
T6055 165-168 DT denotes the
T6054 162-164 IN denotes in
T6053 154-161 VB denotes results
T6052 145-153 NN denotes activity
T6051 139-144 NN denotes NF-κB
T6050 136-138 IN denotes of
T6049 125-135 NN denotes inhibition
T6048 117-124 IN denotes whether
T6047 113-116 VB denotes see
T6046 110-112 TO denotes To
T6045 105-109 NN denotes Mice
T6044 97-104 NN denotes CCR5−/−
T6043 94-96 IN denotes in
T6042 85-93 NN denotes Proteins
T6041 70-84 JJ denotes Anti-apoptotic
T6040 67-69 IN denotes of
T6039 56-66 NN denotes Expression
T6038 52-55 DT denotes the
T6037 49-51 IN denotes of
T6036 38-48 NN denotes Inhibition
T6035 34-37 CC denotes and
T6034 28-33 NNP denotes Death
T6033 23-27 NNP denotes Cell
T6032 13-22 NNP denotes Apoptotic
T6031 10-12 IN denotes of
T6030 0-9 NN denotes Induction
T6213 1138-1139 -RRB- denotes )
T6212 1136-1138 NN denotes 3D
T6211 1129-1135 NN denotes Figure
T6210 1128-1129 -LRB- denotes (
T6209 1120-1127 NN denotes tissues
T6208 1115-1119 NN denotes mice
T6207 1107-1114 NN denotes CCR5−/−
T6206 1104-1106 IN denotes in
T6205 1094-1103 VB denotes decreased
T6204 1080-1093 RB denotes significantly
T6203 1075-1079 VB denotes were
T6202 1068-1074 NN denotes C-IAP1
T6201 1064-1067 CC denotes and
T6200 1058-1063 NN denotes Bcl-2
T6199 1055-1057 IN denotes of
T6198 1048-1054 NN denotes levels
T6197 1044-1047 DT denotes the
T6196 1036-1043 IN denotes whereas
T6195 1034-1035 -COMMA- denotes ,
T6194 1031-1034 NN denotes Bax
T6193 1027-1030 CC denotes and
T6192 1022-1026 NN denotes PARP
R4059 T6030 T6031 arg1Of Induction,of
R4060 T6030 T6035 arg1Of Induction,and
R4061 T6034 T6031 arg2Of Death,of
R4062 T6034 T6032 arg1Of Death,Apoptotic
R4063 T6034 T6033 arg1Of Death,Cell
R4064 T6036 T6035 arg2Of Inhibition,and
R4065 T6036 T6037 arg1Of Inhibition,of
R4066 T6039 T6037 arg2Of Expression,of
R4067 T6039 T6038 arg1Of Expression,the
R4068 T6039 T6040 arg1Of Expression,of
R4069 T6039 T6043 arg1Of Expression,in
R4070 T6042 T6040 arg2Of Proteins,of
R4071 T6042 T6041 arg1Of Proteins,Anti-apoptotic
R4072 T6045 T6043 arg2Of Mice,in
R4073 T6045 T6044 arg1Of Mice,CCR5−/−
R4074 T6047 T6046 arg1Of see,To
R4075 T6049 T6050 arg1Of inhibition,of
R4076 T6049 T6053 arg1Of inhibition,results
R4077 T6052 T6050 arg2Of activity,of
R4078 T6052 T6051 arg1Of activity,NF-κB
R4079 T6053 T6047 arg2Of results,see
R4080 T6053 T6048 arg1Of results,whether
R4081 T6053 T6054 arg1Of results,in
R4082 T6056 T6057 arg1Of induction,of
R4083 T6056 T6061 arg1Of induction,and
R4084 T6060 T6057 arg2Of death,of
R4085 T6060 T6058 arg1Of death,apoptotic
R4086 T6060 T6059 arg1Of death,cell
R4087 T6061 T6054 arg2Of and,in
R4088 T6061 T6055 arg1Of and,the
R4089 T6062 T6061 arg2Of expression,and
R4090 T6062 T6063 arg1Of expression,of
R4091 T6070 T6063 arg2Of protein,of
R4092 T6070 T6064 arg1Of protein,NF-κB
R4093 T6070 T6065 arg1Of protein,target
R4094 T6070 T6066 arg1Of protein,apoptotic
R4095 T6070 T6067 arg1Of protein,cell
R4096 T6070 T6068 arg1Of protein,death
R4097 T6070 T6069 arg1Of protein,regulatory
R4098 T6073 T6047 arg1Of levels,see
R4099 T6073 T6072 arg1Of levels,the
R4100 T6073 T6074 arg1Of levels,of
R4101 T6073 T6086 arg1Of levels,were
R4102 T6073 T6087 arg2Of levels,assessed
R4103 T6077 T6075 arg1Of death,apoptotic
R4104 T6077 T6076 arg1Of death,cell
R4105 T6077 T6078 arg1Of death,and
R4106 T6078 T6074 arg2Of and,of
R4107 T6079 T6078 arg2Of expression,and
R4108 T6079 T6080 arg1Of expression,of
R4109 T6085 T6080 arg2Of proteins,of
R4110 T6085 T6081 arg1Of proteins,apoptotic
R4111 T6085 T6082 arg1Of proteins,cell
R4112 T6085 T6083 arg1Of proteins,death
R4113 T6085 T6084 arg1Of proteins,regulatory
R4114 T6087 T6046 modOf assessed,To
R4115 T6087 T6071 arg1Of assessed,","
R4116 T6087 T6086 arg2Of assessed,were
R4117 T6090 T6088 arg1Of death,Apoptotic
R4118 T6090 T6089 arg1Of death,cell
R4119 T6090 T6091 arg1Of death,in
R4120 T6090 T6095 arg1Of death,were
R4121 T6090 T6096 arg2Of death,evaluated
R4122 T6094 T6091 arg2Of sections,in
R4123 T6094 T6092 arg1Of sections,the
R4124 T6094 T6093 arg1Of sections,tumor
R4125 T6096 T6095 arg2Of evaluated,were
R4126 T6096 T6097 arg1Of evaluated,in
R4127 T6099 T6100 arg1Of CCR5+/+,and
R4128 T6101 T6100 arg2Of CCR5−/−,and
R4129 T6102 T6097 arg2Of mice,in
R4130 T6102 T6098 arg1Of mice,the
R4131 T6102 T6099 arg1Of mice,CCR5+/+
R4132 T6102 T6101 arg1Of mice,CCR5−/−
R4133 T6102 T6103 arg1Of mice,that
R4134 T6102 T6104 arg1Of mice,were
R4135 T6102 T6105 arg2Of mice,inoculated
R4136 T6105 T6104 arg2Of inoculated,were
R4137 T6105 T6106 arg1Of inoculated,with
R4138 T6108 T6106 arg2Of cells,with
R4139 T6108 T6107 arg1Of cells,melanoma
R4140 T6110 T6109 arg1Of staining,TUNEL
R4141 T6110 T6111 arg1Of staining,revealed
R4142 T6114 T6111 arg2Of frequency,revealed
R4143 T6114 T6112 arg1Of frequency,a
R4144 T6114 T6113 arg1Of frequency,higher
R4145 T6114 T6115 arg1Of frequency,of
R4146 T6114 T6119 arg1Of frequency,in
R4147 T6118 T6115 arg2Of death,of
R4148 T6118 T6116 arg1Of death,apoptotic
R4149 T6118 T6117 arg1Of death,cell
R4150 T6122 T6119 arg2Of tissues,in
R4151 T6122 T6120 arg1Of tissues,the
R4152 T6122 T6121 arg1Of tissues,tumor
R4153 T6122 T6123 arg1Of tissues,of
R4154 T6122 T6127 arg1Of tissues,than
R4155 T6126 T6123 arg2Of mice,of
R4156 T6126 T6124 arg1Of mice,the
R4157 T6126 T6125 arg1Of mice,CCR5−/−
R4158 T6128 T6127 arg2Of that,than
R4159 T6128 T6129 arg1Of that,of
R4160 T6132 T6129 arg2Of mice,of
R4161 T6132 T6130 arg1Of mice,the
R4162 T6132 T6131 arg1Of mice,CCR5+/+
R4163 T6132 T6133 arg1Of mice,(
R4164 T6135 T6133 arg2Of 3A,(
R4165 T6135 T6134 arg1Of 3A,Figure
R4166 T6136 T6133 arg3Of ),(
R4167 T6137 T6138 arg1Of Immunohistochemical,and
R4168 T6138 T6140 arg1Of and,showed
R4169 T6139 T6138 arg2Of immunofluorescence,and
R4170 T6143 T6142 arg1Of levels,high
R4171 T6143 T6144 arg1Of levels,of
R4172 T6143 T6149 arg1Of levels,were
R4173 T6143 T6150 arg2Of levels,found
R4174 T6146 T6147 arg1Of caspase-3,and
R4175 T6147 T6144 arg2Of and,of
R4176 T6147 T6145 arg2Of and,cleaved
R4177 T6148 T6147 arg2Of Bax,and
R4178 T6150 T6140 arg2Of found,showed
R4179 T6150 T6141 arg1Of found,that
R4180 T6150 T6149 arg2Of found,were
R4181 T6150 T6152 arg1Of found,frequently
R4182 T6150 T6153 arg1Of found,in
R4183 T6152 T6151 arg1Of frequently,more
R4184 T6156 T6153 arg2Of mice,in
R4185 T6156 T6154 arg1Of mice,the
R4186 T6156 T6155 arg1Of mice,CCR5−/−
R4187 T6156 T6157 arg1Of mice,than
R4188 T6158 T6157 arg2Of in,than
R4189 T6161 T6158 arg2Of mice,in
R4190 T6161 T6159 arg1Of mice,the
R4191 T6161 T6160 arg1Of mice,CCR5+/+
R4192 T6161 T6162 arg1Of mice,(
R4193 T6164 T6163 arg1Of 3B,Figure
R4194 T6164 T6165 arg1Of 3B,and
R4195 T6165 T6162 arg2Of and,(
R4196 T6166 T6165 arg2Of 3C,and
R4197 T6167 T6162 arg3Of ),(
R4198 T6168 T6169 arg1Of Consistent,with
R4199 T6172 T6169 arg2Of data,with
R4200 T6172 T6170 arg1Of data,the
R4201 T6172 T6171 arg1Of data,immunohistochemical
R4202 T6176 T6174 arg1Of analysis,Western
R4203 T6176 T6175 arg1Of analysis,blot
R4204 T6176 T6177 arg1Of analysis,of
R4205 T6176 T6180 arg1Of analysis,showed
R4206 T6179 T6177 arg2Of proteins,of
R4207 T6179 T6178 arg1Of proteins,tumor
R4208 T6180 T6168 arg1Of showed,Consistent
R4209 T6180 T6173 arg1Of showed,","
R4210 T6183 T6180 arg2Of levels,showed
R4211 T6183 T6181 arg1Of levels,greater
R4212 T6183 T6182 arg2Of levels,increased
R4213 T6183 T6184 arg1Of levels,of
R4214 T6183 T6188 arg2Of levels,cleaved
R4215 T6186 T6184 arg2Of caspase-3,of
R4216 T6186 T6185 arg2Of caspase-3,cleaved
R4217 T6188 T6187 arg1Of cleaved,","
R4218 T6189 T6188 arg3Of caspase-9,cleaved
R4219 T6189 T6191 arg2Of caspase-9,cleaved
R4220 T6191 T6190 arg1Of cleaved,","
R4221 T6191 T6195 arg1Of cleaved,","
R4222 T6191 T6196 arg1Of cleaved,whereas
R4223 T6192 T6193 arg1Of PARP,and
R4224 T6193 T6191 arg3Of and,cleaved
R4225 T6194 T6193 arg2Of Bax,and
R4226 T6198 T6197 arg1Of levels,the
R4227 T6198 T6199 arg1Of levels,of
R4228 T6198 T6203 arg1Of levels,were
R4229 T6198 T6205 arg2Of levels,decreased
R4230 T6200 T6201 arg1Of Bcl-2,and
R4231 T6201 T6199 arg2Of and,of
R4232 T6202 T6201 arg2Of C-IAP1,and
R4233 T6205 T6196 arg2Of decreased,whereas
R4234 T6205 T6203 arg2Of decreased,were
R4235 T6205 T6204 arg1Of decreased,significantly
R4236 T6205 T6206 arg1Of decreased,in
R4237 T6209 T6206 arg2Of tissues,in
R4238 T6209 T6207 arg1Of tissues,CCR5−/−
R4239 T6209 T6208 arg1Of tissues,mice
R4240 T6209 T6210 arg1Of tissues,(
R4241 T6212 T6210 arg2Of 3D,(
R4242 T6212 T6211 arg1Of 3D,Figure
R4243 T6213 T6210 arg3Of ),(
R13085 T18249 T18250 arg1Of Induction,of
R13086 T18249 T18254 arg1Of Induction,in
R13087 T18253 T18250 arg2Of Death,of
R13088 T18253 T18251 arg1Of Death,Apoptotic
R13089 T18253 T18252 arg1Of Death,Cell
R13090 T18256 T18254 arg2Of tissues,in
R13091 T18256 T18255 arg1Of tissues,tumor
R13092 T18256 T18257 arg1Of tissues,of
R13093 T18260 T18257 arg2Of mice,of
R13094 T18260 T18258 arg1Of mice,CCR5
R13095 T18260 T18259 arg1Of mice,−/−

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T18222 1239-1243 Protein denotes CCR5
T5981 1107-1111 Protein denotes CCR5
T5980 1068-1074 Protein denotes C-IAP1
T5979 822-826 Protein denotes CCR5
T5978 797-801 Protein denotes CCR5
T5977 641-645 Protein denotes CCR5
T5976 611-615 Protein denotes CCR5
T5975 461-465 Protein denotes CCR5
T5974 449-453 Protein denotes CCR5
T5973 97-101 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18473 1239-1243 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T6234 1068-1074 http://www.uniprot.org/uniprot/Q13490 denotes C-IAP1
T6233 984-993 http://www.uniprot.org/uniprot/P42574 denotes caspase-3
T6232 745-754 http://www.uniprot.org/uniprot/P42574 denotes caspase-3
T6231 1107-1111 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T6230 822-826 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T6229 797-801 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T6228 641-645 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T6227 611-615 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T6226 461-465 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T6225 449-453 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T6224 97-101 http://www.uniprot.org/uniprot/P51681 denotes CCR5

UBERON-AE

Id Subject Object Predicate Lexical cue
T18201 1228-1235 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
T5956 1120-1127 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
T5955 596-603 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues

GO-BP

Id Subject Object Predicate Lexical cue
T18230 28-33 http://purl.obolibrary.org/obo/GO_0016265 denotes Death
T18229 23-33 http://purl.obolibrary.org/obo/GO_0008219 denotes Cell Death
T18228 13-33 http://purl.obolibrary.org/obo/GO_0006915 denotes Apoptotic Cell Death
T6004 577-582 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T6003 399-404 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T6002 343-348 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T6001 304-309 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T6000 249-254 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T5999 197-202 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T5998 28-33 http://purl.obolibrary.org/obo/GO_0016265 denotes Death
T5997 23-48 http://purl.obolibrary.org/obo/GO_1904093 denotes Cell Death and Inhibition
T5996 23-48 http://purl.obolibrary.org/obo/GO_0043069 denotes Cell Death and Inhibition
T5995 23-48 http://purl.obolibrary.org/obo/GO_1901215 denotes Cell Death and Inhibition
T5994 572-582 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T5993 394-404 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T5992 338-348 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T5991 299-309 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T5990 244-254 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T5989 192-202 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T5988 23-33 http://purl.obolibrary.org/obo/GO_0008219 denotes Cell Death
T5987 562-582 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptotic cell death
T5986 328-348 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptotic cell death
T5985 289-309 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptotic cell death
T5984 234-254 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptotic cell death
T5983 182-202 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptotic cell death
T5982 13-33 http://purl.obolibrary.org/obo/GO_0006915 denotes Apoptotic Cell Death

GO-CC

Id Subject Object Predicate Lexical cue
T18231 23-27 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell
T6011 572-576 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T6010 394-398 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T6009 338-342 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T6008 299-303 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T6007 244-248 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T6006 192-196 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T6005 23-27 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell

sentences

Id Subject Object Predicate Lexical cue
T18203 0-1253 Sentence denotes Induction of Apoptotic Cell Death and Inhibition of the Expression of Anti-apoptotic Proteins in CCR5−/− Mice To see whether inhibition of NF-κB activity results in the induction of apoptotic cell death and expression of NF-κB target apoptotic cell death regulatory protein, the levels of apoptotic cell death and expression of apoptotic cell death regulatory proteins were assessed. Apoptotic cell death in the tumor sections were evaluated in the CCR5+/+ and CCR5−/− mice that were inoculated with melanoma cells. TUNEL staining revealed a higher frequency of apoptotic cell death in the tumor tissues of the CCR5−/− mice than that of the CCR5+/+ mice (Figure 3A). Immunohistochemical and immunofluorescence showed that high levels of cleaved caspase-3 and Bax were found more frequently in the CCR5−/− mice than in the CCR5+/+ mice (Figure 3B and 3C). Consistent with the immunohistochemical data, Western blot analysis of tumor proteins showed greater increased levels of cleaved caspase-3, cleaved caspase-9, cleaved PARP and Bax, whereas the levels of Bcl-2 and C-IAP1 were significantly decreased in CCR5−/− mice tissues (Figure 3D). 10.1371/journal.pone.0033747.g003 Figure 3 Induction of apoptotic cell death in tumor tissues of CCR5 −/− mice.
T5962 855-1140 Sentence denotes Consistent with the immunohistochemical data, Western blot analysis of tumor proteins showed greater increased levels of cleaved caspase-3, cleaved caspase-9, cleaved PARP and Bax, whereas the levels of Bcl-2 and C-IAP1 were significantly decreased in CCR5−/− mice tissues (Figure 3D).
T5961 667-854 Sentence denotes Immunohistochemical and immunofluorescence showed that high levels of cleaved caspase-3 and Bax were found more frequently in the CCR5−/− mice than in the CCR5+/+ mice (Figure 3B and 3C).
T5960 516-666 Sentence denotes TUNEL staining revealed a higher frequency of apoptotic cell death in the tumor tissues of the CCR5−/− mice than that of the CCR5+/+ mice (Figure 3A).
T5959 384-515 Sentence denotes Apoptotic cell death in the tumor sections were evaluated in the CCR5+/+ and CCR5−/− mice that were inoculated with melanoma cells.
T5958 110-383 Sentence denotes To see whether inhibition of NF-κB activity results in the induction of apoptotic cell death and expression of NF-κB target apoptotic cell death regulatory protein, the levels of apoptotic cell death and expression of apoptotic cell death regulatory proteins were assessed.
T5957 0-109 Sentence denotes Induction of Apoptotic Cell Death and Inhibition of the Expression of Anti-apoptotic Proteins in CCR5−/− Mice
T88 0-109 Sentence denotes Induction of Apoptotic Cell Death and Inhibition of the Expression of Anti-apoptotic Proteins in CCR5−/− Mice
T89 110-383 Sentence denotes To see whether inhibition of NF-κB activity results in the induction of apoptotic cell death and expression of NF-κB target apoptotic cell death regulatory protein, the levels of apoptotic cell death and expression of apoptotic cell death regulatory proteins were assessed.
T90 384-515 Sentence denotes Apoptotic cell death in the tumor sections were evaluated in the CCR5+/+ and CCR5−/− mice that were inoculated with melanoma cells.
T91 516-666 Sentence denotes TUNEL staining revealed a higher frequency of apoptotic cell death in the tumor tissues of the CCR5−/− mice than that of the CCR5+/+ mice (Figure 3A).
T92 667-854 Sentence denotes Immunohistochemical and immunofluorescence showed that high levels of cleaved caspase-3 and Bax were found more frequently in the CCR5−/− mice than in the CCR5+/+ mice (Figure 3B and 3C).
T93 855-1140 Sentence denotes Consistent with the immunohistochemical data, Western blot analysis of tumor proteins showed greater increased levels of cleaved caspase-3, cleaved caspase-9, cleaved PARP and Bax, whereas the levels of Bcl-2 and C-IAP1 were significantly decreased in CCR5−/− mice tissues (Figure 3D).
T94 1141-1253 Sentence denotes 10.1371/journal.pone.0033747.g003 Figure 3 Induction of apoptotic cell death in tumor tissues of CCR5 −/− mice.

simple1

Id Subject Object Predicate Lexical cue
T18243 1239-1243 Protein denotes CCR5
T6029 1107-1111 Protein denotes CCR5
T6028 1068-1074 Protein denotes C-IAP1
T6027 822-826 Protein denotes CCR5
T6026 797-801 Protein denotes CCR5
T6025 641-645 Protein denotes CCR5
T6024 611-615 Protein denotes CCR5
T6023 461-465 Protein denotes CCR5
T6022 449-453 Protein denotes CCR5
T6021 97-101 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T18481 1239-1243 Protein denotes CCR5
T6246 1094-1103 Negative_regulation denotes decreased
T6245 38-48 Negative_regulation denotes Inhibition
T6244 56-66 Gene_expression denotes Expression
T6243 1107-1111 Protein denotes CCR5
T6242 1068-1074 Protein denotes C-IAP1
T6241 822-826 Protein denotes CCR5
T6240 797-801 Protein denotes CCR5
T6239 641-645 Protein denotes CCR5
T6238 611-615 Protein denotes CCR5
T6237 461-465 Protein denotes CCR5
T6236 449-453 Protein denotes CCR5
T6235 97-101 Protein denotes CCR5
R4245 T6235 T6244 themeOf CCR5,Expression
R4246 T6242 T6246 themeOf C-IAP1,decreased
R4247 T6244 T6245 themeOf Expression,Inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T18555 1222-1252 Localization denotes tumor tissues of CCR5 −/− mice
T18546 1236-1243 Protein denotes of CCR5
T18545 1222-1252 Protein denotes tumor tissues of CCR5 −/− mice
T6415 38-102 Negative_regulation denotes Inhibition of the Expression of Anti-apoptotic Proteins in CCR5−
T6414 314-368 Gene_expression denotes expression of apoptotic cell death regulatory proteins
T6413 125-153 Negative_regulation denotes inhibition of NF-κB activity
T6412 586-624 Localization denotes the tumor tissues of the CCR5−/− mice
T6411 805-809 Protein denotes mice
T6410 586-623 Protein denotes the tumor tissues of the CCR5−/− mice
T6409 1022-1026 Protein denotes PARP
T6408 75-102 Protein denotes apoptotic Proteins in CCR5−
T6407 1031-1034 Protein denotes Bax
T6406 923-940 Protein denotes of tumor proteins
T6405 759-762 Protein denotes Bax
T6404 461-473 Protein denotes CCR5−/− mice
T6403 500-514 Entity denotes melanoma cells
T6402 1068-1074 Protein denotes C-IAP1
T6401 818-853 Protein denotes the CCR5+/+ mice (Figure 3B and 3C)
T6400 1003-1012 Protein denotes caspase-9
T6399 105-109 Protein denotes Mice
T6398 325-368 Protein denotes of apoptotic cell death regulatory proteins
T6397 745-754 Protein denotes caspase-3
T6396 139-144 Protein denotes NF-κB
T6395 637-665 Protein denotes the CCR5+/+ mice (Figure 3A)
T6394 966-1013 Protein denotes levels of cleaved caspase-3, cleaved caspase-9,
T6393 1115-1119 Protein denotes mice
T6392 1058-1063 Protein denotes Bcl-2
R4353 T6398 T6414 themeOf of apoptotic cell death regulatory proteins,expression of apoptotic cell death regulatory proteins
R4354 T6410 T6412 themeOf the tumor tissues of the CCR5−/− mice,the tumor tissues of the CCR5−/− mice
R13303 T18545 T18555 themeOf tumor tissues of CCR5 −/− mice,tumor tissues of CCR5 −/− mice

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T18570 1252-1253 . denotes .
T18569 1248-1252 NNS denotes mice
T18568 1246-1247 NN denotes −
T18567 1245-1246 NN denotes /
T18566 1244-1245 CD denotes −
T18565 1239-1243 CD denotes CCR5
T18564 1236-1238 IN denotes of
T18563 1228-1235 NNS denotes tissues
T18562 1222-1227 NN denotes tumor
T18561 1219-1221 IN denotes in
T18560 28-33 NN denotes Death
T18559 23-27 NN denotes Cell
T18558 13-22 JJ denotes Apoptotic
T18557 10-12 IN denotes of
T18556 0-9 NNP denotes Induction
T6544 1139-1140 . denotes .
T6543 1138-1139 -RRB- denotes )
T6542 1136-1138 CD denotes 3D
T6541 1129-1135 NN denotes Figure
T6540 1128-1129 -LRB- denotes (
T6539 1120-1127 NNS denotes tissues
T6538 1115-1119 NNS denotes mice
T6537 1113-1114 NN denotes −
T6536 1112-1113 NN denotes /
T6535 1111-1112 CD denotes −
T6534 1107-1111 CD denotes CCR5
T6533 1104-1106 IN denotes in
T6532 1094-1103 VBN denotes decreased
T6531 1080-1093 RB denotes significantly
T6530 1075-1079 VBD denotes were
T6529 1068-1074 NN denotes C-IAP1
T6528 1064-1067 CC denotes and
T6527 1058-1063 NN denotes Bcl-2
T6526 1055-1057 IN denotes of
T6525 1048-1054 NNS denotes levels
T6524 1044-1047 DT denotes the
T6523 1036-1043 IN denotes whereas
T6522 1034-1035 , denotes ,
T6521 1031-1034 NNP denotes Bax
T6520 1027-1030 CC denotes and
T6519 1022-1026 NNP denotes PARP
T6518 1014-1021 JJ denotes cleaved
T6517 1012-1013 , denotes ,
T6516 1003-1012 JJ denotes caspase-9
T6515 995-1002 JJ denotes cleaved
T6514 993-994 , denotes ,
T6513 984-993 JJ denotes caspase-3
T6512 976-983 JJ denotes cleaved
T6511 973-975 IN denotes of
T6510 966-972 NNS denotes levels
T6509 956-965 VBD denotes increased
T6508 948-955 JJR denotes greater
T6507 941-947 VBD denotes showed
T6506 932-940 NNS denotes proteins
T6505 926-931 NN denotes tumor
T6504 923-925 IN denotes of
T6503 914-922 NN denotes analysis
T6502 909-913 NN denotes blot
T6501 901-908 JJ denotes Western
T6500 899-900 , denotes ,
T6499 895-899 NNS denotes data
T6498 875-894 JJ denotes immunohistochemical
T6497 871-874 DT denotes the
T6496 866-870 IN denotes with
T6495 855-865 JJ denotes Consistent
T6494 853-854 . denotes .
T6493 852-853 -RRB- denotes )
T6492 850-852 NNP denotes 3C
T6491 846-849 CC denotes and
T6482 818-821 DT denotes the
T6481 815-817 IN denotes in
T6480 810-814 IN denotes than
T6479 805-809 NNS denotes mice
T6478 803-804 CD denotes −
T6477 802-803 VBD denotes /
T6476 801-802 NNP denotes −
T6475 797-801 NNP denotes CCR5
T6474 793-796 DT denotes the
T6473 790-792 IN denotes in
T6472 779-789 RB denotes frequently
T6471 774-778 RBR denotes more
T6470 768-773 VBN denotes found
T6469 763-767 VBD denotes were
T6468 759-762 NNP denotes Bax
T6467 755-758 CC denotes and
T6466 745-754 JJ denotes caspase-3
T6465 737-744 JJ denotes cleaved
T6464 734-736 IN denotes of
T6463 727-733 NNS denotes levels
T6462 722-726 JJ denotes high
T6461 717-721 IN denotes that
T6460 710-716 VBD denotes showed
T6459 691-709 NN denotes immunofluorescence
T6458 687-690 CC denotes and
T6457 667-686 NNP denotes Immunohistochemical
T6456 665-666 . denotes .
T6455 664-665 -RRB- denotes )
T6454 662-664 NN denotes 3A
T6453 655-661 NN denotes Figure
T6452 654-655 -LRB- denotes (
T6451 649-653 NNS denotes mice
T6450 647-648 CD denotes +
T6449 646-647 VBD denotes /
T6448 645-646 NNP denotes +
T6447 641-645 NNP denotes CCR5
T6446 637-640 DT denotes the
T6445 634-636 IN denotes of
T6444 629-633 DT denotes that
T6443 624-628 IN denotes than
T6442 619-623 NNS denotes mice
T6441 617-618 CD denotes −
T6440 616-617 VBD denotes /
T6439 615-616 NNP denotes −
T6438 611-615 NNP denotes CCR5
T6437 607-610 DT denotes the
T6436 604-606 IN denotes of
T6435 596-603 NNS denotes tissues
T6434 590-595 NN denotes tumor
T6433 586-589 DT denotes the
T6432 583-585 IN denotes in
T6431 577-582 NN denotes death
T6430 572-576 NN denotes cell
T6429 562-571 JJ denotes apoptotic
T6428 559-561 IN denotes of
T6427 549-558 NN denotes frequency
T6426 542-548 JJR denotes higher
T6425 540-541 DT denotes a
T6424 531-539 VBD denotes revealed
T6423 522-530 VBG denotes staining
T6422 516-521 NNP denotes TUNEL
T6421 514-515 . denotes .
T6420 509-514 NNS denotes cells
T6419 500-508 NN denotes melanoma
T6418 495-499 IN denotes with
T6417 484-494 VBN denotes inoculated
T6416 479-483 VBD denotes were
T6391 474-478 WDT denotes that
T6390 469-473 NNS denotes mice
T6389 467-468 NN denotes −
T6388 466-467 NN denotes /
T6387 465-466 CD denotes −
T6386 461-465 CD denotes CCR5
T6385 457-460 CC denotes and
T6384 455-456 CD denotes +
T6383 454-455 VBD denotes /
T6382 453-454 NNP denotes +
T6381 449-453 NNP denotes CCR5
T6380 445-448 DT denotes the
T6379 442-444 IN denotes in
T6378 432-441 VBN denotes evaluated
T6377 427-431 VBD denotes were
T6376 418-426 NNS denotes sections
T6375 412-417 NN denotes tumor
T6374 408-411 DT denotes the
T6373 405-407 IN denotes in
T6372 399-404 NN denotes death
T6371 394-398 NN denotes cell
T6370 384-393 JJ denotes Apoptotic
T6369 382-383 . denotes .
T6368 374-382 VBN denotes assessed
T6367 369-373 VBD denotes were
T6366 360-368 NNS denotes proteins
T6365 349-359 JJ denotes regulatory
T6364 343-348 NN denotes death
T6363 338-342 NN denotes cell
T6362 328-337 JJ denotes apoptotic
T6361 325-327 IN denotes of
T6360 314-324 NN denotes expression
T6359 310-313 CC denotes and
T6358 304-309 NN denotes death
T6357 299-303 NN denotes cell
T6356 289-298 JJ denotes apoptotic
T6355 286-288 IN denotes of
T6354 279-285 NNS denotes levels
T6353 275-278 DT denotes the
T6352 273-274 , denotes ,
T6351 266-273 NN denotes protein
T6350 255-265 JJ denotes regulatory
T6349 249-254 NN denotes death
T6348 244-248 NN denotes cell
T6347 234-243 JJ denotes apoptotic
T6346 227-233 NN denotes target
T6345 221-226 JJ denotes NF-κB
T6344 218-220 IN denotes of
T6343 207-217 NN denotes expression
T6342 203-206 CC denotes and
T6341 197-202 NN denotes death
T6340 192-196 NN denotes cell
T6339 182-191 JJ denotes apoptotic
T6338 179-181 IN denotes of
T6337 169-178 NN denotes induction
T6336 165-168 DT denotes the
T6335 162-164 IN denotes in
T6334 154-161 NNS denotes results
T6333 145-153 NN denotes activity
T6332 139-144 JJ denotes NF-κB
T6331 136-138 IN denotes of
T6330 125-135 NN denotes inhibition
T6329 117-124 IN denotes whether
T6328 113-116 VB denotes see
T6327 110-112 TO denotes To
T6326 105-109 NNP denotes Mice
T6304 103-104 CD denotes −
T6303 102-103 VBD denotes /
T6302 101-102 NNP denotes −
T6301 97-101 NNP denotes CCR5
T6300 94-96 IN denotes in
T6299 85-93 NNPS denotes Proteins
T6298 70-84 JJ denotes Anti-apoptotic
T6297 67-69 IN denotes of
T6296 56-66 NN denotes Expression
T6295 52-55 DT denotes the
T6294 49-51 IN denotes of
T6293 38-48 NNP denotes Inhibition
T6292 34-37 CC denotes and
T6291 28-33 NNP denotes Death
T6290 23-27 NNP denotes Cell
T6289 13-22 NNP denotes Apoptotic
T6288 10-12 IN denotes of
T6287 0-9 NNP denotes Induction
T6490 843-845 NNP denotes 3B
T6489 836-842 NNP denotes Figure
T6488 835-836 -LRB- denotes (
T6487 830-834 NNS denotes mice
T6486 828-829 CD denotes +
T6485 827-828 VBD denotes /
T6484 826-827 NNP denotes +
T6483 822-826 NNP denotes CCR5
R4259 T6287 T6326 nmod Induction,Mice
R4260 T6288 T6287 prep of,Induction
R4261 T6289 T6291 compound Apoptotic,Death
R4262 T6290 T6291 compound Cell,Death
R4263 T6291 T6288 pobj Death,of
R4264 T6292 T6291 cc and,Death
R4265 T6293 T6291 conj Inhibition,Death
R4266 T6294 T6293 prep of,Inhibition
R4267 T6295 T6296 det the,Expression
R4268 T6296 T6294 pobj Expression,of
R4269 T6297 T6296 prep of,Expression
R4270 T6298 T6299 amod Anti-apoptotic,Proteins
R4271 T6299 T6297 pobj Proteins,of
R4272 T6300 T6296 prep in,Expression
R4273 T6301 T6302 compound CCR5,−
R4274 T6302 T6300 pobj −,in
R4275 T6303 T6326 nmod /,Mice
R4276 T6304 T6326 nummod −,Mice
R4287 T6326 T6326 ROOT Mice,Mice
R4288 T6327 T6328 aux To,see
R4289 T6328 T6328 ROOT see,see
R4290 T6329 T6368 mark whether,assessed
R4291 T6330 T6368 nsubjpass inhibition,assessed
R4292 T6331 T6330 prep of,inhibition
R4293 T6332 T6334 amod NF-κB,results
R4294 T6333 T6334 compound activity,results
R4295 T6334 T6331 pobj results,of
R4296 T6335 T6334 prep in,results
R4297 T6336 T6337 det the,induction
R4298 T6337 T6335 pobj induction,in
R4299 T6338 T6337 prep of,induction
R4300 T6339 T6341 amod apoptotic,death
R4301 T6340 T6341 compound cell,death
R4302 T6341 T6338 pobj death,of
R4303 T6342 T6341 cc and,death
R4304 T6343 T6341 conj expression,death
R4305 T6344 T6343 prep of,expression
R4306 T6345 T6346 amod NF-κB,target
R4307 T6346 T6351 nmod target,protein
R4308 T6347 T6351 amod apoptotic,protein
R4309 T6348 T6349 compound cell,death
R4310 T6349 T6351 nmod death,protein
R4311 T6350 T6351 amod regulatory,protein
R4312 T6351 T6344 pobj protein,of
R4313 T6352 T6368 punct ",",assessed
R4314 T6353 T6354 det the,levels
R4315 T6354 T6368 nsubjpass levels,assessed
R4316 T6355 T6354 prep of,levels
R4317 T6356 T6358 amod apoptotic,death
R4318 T6357 T6358 compound cell,death
R4319 T6358 T6355 pobj death,of
R4320 T6359 T6358 cc and,death
R4321 T6360 T6358 conj expression,death
R4322 T6361 T6360 prep of,expression
R4323 T6362 T6366 amod apoptotic,proteins
R4324 T6363 T6364 compound cell,death
R4325 T6364 T6366 nmod death,proteins
R4326 T6365 T6366 amod regulatory,proteins
R4327 T6366 T6361 pobj proteins,of
R4328 T6367 T6368 auxpass were,assessed
R4329 T6368 T6328 ccomp assessed,see
R4330 T6369 T6328 punct .,see
R4331 T6370 T6372 amod Apoptotic,death
R4332 T6371 T6372 compound cell,death
R4333 T6372 T6378 nsubjpass death,evaluated
R4334 T6373 T6372 prep in,death
R4335 T6374 T6376 det the,sections
R4336 T6375 T6376 compound tumor,sections
R4337 T6376 T6373 pobj sections,in
R4338 T6377 T6378 auxpass were,evaluated
R4339 T6378 T6378 ROOT evaluated,evaluated
R4340 T6379 T6378 prep in,evaluated
R4341 T6380 T6382 det the,+
R4342 T6381 T6382 compound CCR5,+
R4343 T6382 T6379 pobj +,in
R4344 T6383 T6378 advcl /,evaluated
R4345 T6384 T6390 nummod +,mice
R4346 T6385 T6384 cc and,+
R4347 T6386 T6390 nummod CCR5,mice
R4348 T6387 T6390 nummod −,mice
R4349 T6388 T6390 nmod /,mice
R4350 T6389 T6390 compound −,mice
R4351 T6390 T6383 dobj mice,/
R4352 T6391 T6417 nsubjpass that,inoculated
R4355 T6416 T6417 auxpass were,inoculated
R4356 T6417 T6390 relcl inoculated,mice
R4357 T6418 T6417 prep with,inoculated
R4358 T6419 T6420 compound melanoma,cells
R4359 T6420 T6418 pobj cells,with
R4360 T6421 T6378 punct .,evaluated
R4361 T6422 T6424 nsubj TUNEL,revealed
R4362 T6423 T6424 nsubj staining,revealed
R4363 T6424 T6424 ROOT revealed,revealed
R4364 T6425 T6427 det a,frequency
R4365 T6426 T6427 amod higher,frequency
R4366 T6427 T6424 dobj frequency,revealed
R4367 T6428 T6427 prep of,frequency
R4368 T6429 T6431 amod apoptotic,death
R4369 T6430 T6431 compound cell,death
R4370 T6431 T6428 pobj death,of
R4371 T6432 T6427 prep in,frequency
R4372 T6433 T6435 det the,tissues
R4373 T6434 T6435 compound tumor,tissues
R4374 T6435 T6432 pobj tissues,in
R4375 T6436 T6435 prep of,tissues
R4376 T6437 T6439 det the,−
R4377 T6438 T6439 compound CCR5,−
R4378 T6439 T6436 pobj −,of
R4379 T6440 T6424 conj /,revealed
R4380 T6441 T6442 nummod −,mice
R4381 T6442 T6440 dobj mice,/
R4382 T6443 T6442 prep than,mice
R4383 T6444 T6443 pobj that,than
R4384 T6445 T6444 prep of,that
R4385 T6446 T6448 det the,+
R4386 T6447 T6448 compound CCR5,+
R4387 T6448 T6445 pobj +,of
R4388 T6449 T6440 conj /,/
R4389 T6450 T6451 nummod +,mice
R4390 T6451 T6449 dobj mice,/
R4391 T6452 T6454 punct (,3A
R4392 T6453 T6454 compound Figure,3A
R4393 T6454 T6451 appos 3A,mice
R4394 T6455 T6451 punct ),mice
R4395 T6456 T6424 punct .,revealed
R4396 T6457 T6460 nsubj Immunohistochemical,showed
R4397 T6458 T6457 cc and,Immunohistochemical
R4398 T6459 T6457 conj immunofluorescence,Immunohistochemical
R4399 T6460 T6460 ROOT showed,showed
R4400 T6461 T6470 mark that,found
R4401 T6462 T6463 amod high,levels
R4402 T6463 T6470 nsubjpass levels,found
R4403 T6464 T6463 prep of,levels
R4404 T6465 T6466 amod cleaved,caspase-3
R4405 T6466 T6464 pobj caspase-3,of
R4406 T6467 T6466 cc and,caspase-3
R4407 T6468 T6466 conj Bax,caspase-3
R4408 T6469 T6470 auxpass were,found
R4409 T6470 T6460 ccomp found,showed
R4410 T6471 T6472 advmod more,frequently
R4411 T6472 T6470 advmod frequently,found
R4412 T6473 T6470 prep in,found
R4413 T6474 T6476 det the,−
R4414 T6475 T6476 compound CCR5,−
R4415 T6476 T6473 pobj −,in
R4416 T6477 T6470 advmod /,found
R4417 T6478 T6479 nummod −,mice
R4418 T6479 T6477 dobj mice,/
R4419 T6480 T6479 prep than,mice
R4420 T6481 T6480 prep in,than
R4421 T6482 T6484 det the,+
R4422 T6483 T6484 compound CCR5,+
R4423 T6484 T6481 pobj +,in
R4424 T6485 T6487 amod /,mice
R4425 T6486 T6487 nummod +,mice
R4426 T6487 T6479 conj mice,mice
R4427 T6488 T6490 punct (,3B
R4428 T6489 T6490 compound Figure,3B
R4429 T6490 T6479 appos 3B,mice
R4430 T6491 T6490 cc and,3B
R4431 T6492 T6490 conj 3C,3B
R4432 T6493 T6490 punct ),3B
R4433 T6494 T6460 punct .,showed
R4434 T6495 T6507 nsubj Consistent,showed
R4435 T6496 T6495 prep with,Consistent
R4436 T6497 T6499 det the,data
R4437 T6498 T6499 amod immunohistochemical,data
R4438 T6499 T6496 pobj data,with
R4439 T6500 T6499 punct ",",data
R4440 T6501 T6503 amod Western,analysis
R4441 T6502 T6503 compound blot,analysis
R4442 T6503 T6499 appos analysis,data
R4443 T6504 T6503 prep of,analysis
R4444 T6505 T6506 compound tumor,proteins
R4445 T6506 T6504 pobj proteins,of
R4446 T6507 T6507 ROOT showed,showed
R4447 T6508 T6510 amod greater,levels
R4448 T6509 T6510 amod increased,levels
R4449 T6510 T6507 dobj levels,showed
R4450 T6511 T6510 prep of,levels
R4451 T6512 T6516 amod cleaved,caspase-9
R4452 T6513 T6516 amod caspase-3,caspase-9
R4453 T6514 T6516 punct ",",caspase-9
R4454 T6515 T6516 compound cleaved,caspase-9
R4455 T6516 T6511 pobj caspase-9,of
R4456 T6517 T6516 punct ",",caspase-9
R4457 T6518 T6519 compound cleaved,PARP
R4458 T6519 T6516 appos PARP,caspase-9
R4459 T6520 T6519 cc and,PARP
R4460 T6521 T6519 conj Bax,PARP
R4461 T6522 T6507 punct ",",showed
R4462 T6523 T6532 mark whereas,decreased
R4463 T6524 T6525 det the,levels
R4464 T6525 T6532 nsubjpass levels,decreased
R4465 T6526 T6525 prep of,levels
R4466 T6527 T6526 pobj Bcl-2,of
R4467 T6528 T6527 cc and,Bcl-2
R4468 T6529 T6527 conj C-IAP1,Bcl-2
R4469 T6530 T6532 auxpass were,decreased
R4470 T6531 T6532 advmod significantly,decreased
R4471 T6532 T6507 advcl decreased,showed
R4472 T6533 T6532 prep in,decreased
R4473 T6534 T6539 nummod CCR5,tissues
R4474 T6535 T6538 nummod −,mice
R4475 T6536 T6538 nmod /,mice
R4476 T6537 T6538 nsubj −,mice
R4477 T6538 T6539 compound mice,tissues
R4478 T6539 T6533 pobj tissues,in
R4479 T6540 T6541 punct (,Figure
R4480 T6541 T6539 appos Figure,tissues
R4481 T6542 T6541 nummod 3D,Figure
R4482 T6543 T6541 punct ),Figure
R4483 T6544 T6507 punct .,showed
R13304 T18556 T18556 ROOT Induction,Induction
R13305 T18557 T18556 prep of,Induction
R13306 T18558 T18560 amod Apoptotic,Death
R13307 T18559 T18560 compound Cell,Death
R13308 T18560 T18557 pobj Death,of
R13309 T18561 T18556 prep in,Induction
R13310 T18562 T18563 compound tumor,tissues
R13311 T18563 T18561 pobj tissues,in
R13312 T18564 T18563 prep of,tissues
R13313 T18565 T18569 nummod CCR5,mice
R13314 T18566 T18569 nummod −,mice
R13315 T18567 T18569 nmod /,mice
R13316 T18568 T18569 compound −,mice
R13317 T18569 T18564 pobj mice,of
R13318 T18570 T18556 punct .,Induction

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6286 956-965 Positive_regulation denotes increased
T6285 956-965 Positive_regulation denotes increased
T6284 956-965 Positive_regulation denotes increased
T6283 1094-1103 Negative_regulation denotes decreased
T6282 966-972 Gene_expression denotes levels
T6281 966-972 Gene_expression denotes levels
T6280 966-972 Gene_expression denotes levels
T6279 1058-1074 Protein denotes Bcl-2 and C-IAP1
T6278 1031-1034 Protein denotes Bax
T6277 1022-1026 Protein denotes PARP
T6276 984-1012 Protein denotes caspase-3, cleaved caspase-9
T6275 759-762 Protein denotes Bax
T6274 745-754 Protein denotes caspase-3
T6273 641-645 Protein denotes CCR5
T6272 125-135 Negative_regulation denotes inhibition
T6271 328-368 Protein denotes apoptotic cell death regulatory proteins
T6270 221-273 Protein denotes NF-κB target apoptotic cell death regulatory protein
T6269 139-144 Protein denotes NF-κB
T6268 38-48 Negative_regulation denotes Inhibition
T6267 56-66 Gene_expression denotes Expression
T6266 70-93 Protein denotes Anti-apoptotic Proteins
R4249 T6266 T6267 themeOf Anti-apoptotic Proteins,Expression
R4250 T6267 T6268 themeOf Expression,Inhibition
R4251 T6269 T6272 themeOf NF-κB,inhibition
R4252 T6276 T6280 themeOf "caspase-3, cleaved caspase-9",levels
R4253 T6277 T6281 themeOf PARP,levels
R4254 T6278 T6282 themeOf Bax,levels
R4255 T6279 T6283 themeOf Bcl-2 and C-IAP1,decreased
R4256 T6280 T6284 themeOf levels,increased
R4257 T6281 T6285 themeOf levels,increased
R4258 T6282 T6286 themeOf levels,increased