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PMC:3342329 / 1054-1201 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T104 139-145 Protein denotes IL-1Ra
T103 83-87 Protein denotes CCR5
T102 46-55 Negative_regulation denotes decreased
T101 34-40 Protein denotes C-IAP1
T74 139-145 Protein denotes IL-1Ra
T73 83-87 Protein denotes CCR5
T72 34-40 Protein denotes C-IAP1

testone

Id Subject Object Predicate Lexical cue
T38 139-145 Protein denotes IL-1Ra
T37 83-87 Protein denotes CCR5
T36 34-40 Protein denotes C-IAP1
T55 46-55 Negative_regulation denotes decreased
T54 0-10 Gene_expression denotes expression
R7 T36 T55 themeOf C-IAP1,decreased
R8 T36 T54 themeOf C-IAP1,expression
R13 T54 T55 themeOf expression,decreased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T643 46-55 Negative_regulation denotes decreased
T642 0-10 Gene_expression denotes expression
T630 139-145 Protein denotes IL-1Ra
T629 83-87 Protein denotes CCR5
T628 34-40 Protein denotes C-IAP1
R344 T628 T642 themeOf C-IAP1,expression
R345 T628 T643 themeOf C-IAP1,decreased

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T769 0-10 Gene_expression denotes expression
T768 46-55 Negative_regulation denotes decreased
T756 139-145 Protein denotes IL-1Ra
T755 83-87 Protein denotes CCR5
T754 34-40 Protein denotes C-IAP1
R413 T754 T769 themeOf C-IAP1,expression
R414 T754 T768 themeOf C-IAP1,decreased
R418 T769 T768 themeOf expression,decreased

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T453 145-146 -COMMA- denotes ,
T452 139-145 NN denotes IL-1Ra
T451 136-138 IN denotes of
T450 130-135 NN denotes level
T449 126-129 DT denotes the
T448 121-125 IN denotes that
T447 115-120 VB denotes found
T446 112-114 PRP denotes we
T445 110-111 -COMMA- denotes ,
T444 97-110 RB denotes Interestingly
T443 91-95 NN denotes mice
T442 83-90 NN denotes CCR5−/−
T441 80-82 IN denotes of
T440 72-79 NN denotes tissues
T439 63-71 NN denotes melanoma
T438 59-62 DT denotes the
T437 56-58 IN denotes in
T436 46-55 VB denotes decreased
T435 42-45 VB denotes was
T434 40-41 -COMMA- denotes ,
T433 34-40 NN denotes C-IAP1
T432 32-33 -COMMA- denotes ,
T431 27-32 NN denotes Bcl-2
T430 24-26 IN denotes as
T429 19-23 JJ denotes such
T428 17-18 -COMMA- denotes ,
T427 11-17 NN denotes levels
T426 0-10 NN denotes expression
R207 T427 T426 arg1Of levels,expression
R208 T427 T428 arg1Of levels,","
R209 T427 T430 arg1Of levels,as
R210 T427 T435 arg1Of levels,was
R211 T427 T436 arg2Of levels,decreased
R212 T430 T429 arg1Of as,such
R213 T431 T430 arg2Of Bcl-2,as
R214 T431 T432 arg1Of Bcl-2,","
R215 T433 T432 arg2Of C-IAP1,","
R217 T436 T434 arg1Of decreased,","
R218 T436 T435 arg2Of decreased,was
R219 T436 T437 arg1Of decreased,in
R220 T440 T437 arg2Of tissues,in
R221 T440 T438 arg1Of tissues,the
R222 T440 T439 arg1Of tissues,melanoma
R223 T440 T441 arg1Of tissues,of
R224 T443 T441 arg2Of mice,of
R225 T443 T442 arg1Of mice,CCR5−/−
R226 T446 T447 arg1Of we,found
R227 T447 T444 arg1Of found,Interestingly
R228 T447 T445 arg1Of found,","
R229 T450 T449 arg1Of level,the
R230 T450 T451 arg1Of level,of
R231 T450 T453 arg1Of level,","
R234 T452 T451 arg2Of IL-1Ra,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T180 139-145 Protein denotes IL-1Ra
T179 83-87 Protein denotes CCR5
T178 34-40 Protein denotes C-IAP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T552 34-40 http://www.uniprot.org/uniprot/Q13490 denotes C-IAP1
T542 83-87 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T532 139-145 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra

UBERON-AE

Id Subject Object Predicate Lexical cue
T115 72-79 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues

simple1

Id Subject Object Predicate Lexical cue
T253 139-145 Protein denotes IL-1Ra
T252 83-87 Protein denotes CCR5
T251 34-40 Protein denotes C-IAP1

DLUT931

Id Subject Object Predicate Lexical cue
T583 46-55 Negative_regulation denotes decreased
T582 0-10 Gene_expression denotes expression
T570 139-145 Protein denotes IL-1Ra
T569 83-87 Protein denotes CCR5
T568 34-40 Protein denotes C-IAP1
R320 T568 T582 themeOf C-IAP1,expression
R326 T582 T583 themeOf expression,decreased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T812 91-95 Protein denotes mice
T811 27-32 Protein denotes Bcl-2
T806 34-41 Protein denotes C-IAP1,
T798 139-146 Protein denotes IL-1Ra,

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1041 145-146 , denotes ,
T1040 139-145 NN denotes IL-1Ra
T1039 136-138 IN denotes of
T1038 130-135 NN denotes level
T1037 126-129 DT denotes the
T1036 121-125 IN denotes that
T1035 115-120 VBD denotes found
T1034 112-114 PRP denotes we
T1033 110-111 , denotes ,
T1032 97-110 RB denotes Interestingly
T1031 95-96 . denotes .
T1030 91-95 NNS denotes mice
T1029 89-90 NN denotes −
T1028 88-89 NN denotes /
T1027 87-88 CD denotes −
T1026 83-87 CD denotes CCR5
T1025 80-82 IN denotes of
T1024 72-79 NNS denotes tissues
T1023 63-71 NN denotes melanoma
T1022 59-62 DT denotes the
T1021 56-58 IN denotes in
T1020 46-55 VBN denotes decreased
T1019 42-45 VBD denotes was
T1018 40-41 , denotes ,
T1017 34-40 NNP denotes C-IAP1
T1016 32-33 , denotes ,
T1015 27-32 NN denotes Bcl-2
T1014 24-26 IN denotes as
T1013 19-23 JJ denotes such
T1012 17-18 , denotes ,
T1011 11-17 NNS denotes levels
T1010 0-10 NN denotes expression
R615 T1010 T1011 compound expression,levels
R616 T1011 T1020 nsubjpass levels,decreased
R617 T1012 T1011 punct ",",levels
R618 T1013 T1014 amod such,as
R619 T1014 T1011 prep as,levels
R620 T1015 T1014 pobj Bcl-2,as
R621 T1016 T1015 punct ",",Bcl-2
R622 T1017 T1015 conj C-IAP1,Bcl-2
R623 T1018 T1020 punct ",",decreased
R624 T1019 T1020 auxpass was,decreased
R626 T1021 T1020 prep in,decreased
R627 T1022 T1024 det the,tissues
R629 T1023 T1024 compound melanoma,tissues
R630 T1024 T1021 pobj tissues,in
R631 T1025 T1024 prep of,tissues
R632 T1026 T1030 nummod CCR5,mice
R633 T1027 T1030 nummod −,mice
R634 T1028 T1030 nmod /,mice
R635 T1029 T1030 compound −,mice
R636 T1030 T1025 pobj mice,of
R638 T1032 T1035 advmod Interestingly,found
R639 T1033 T1035 punct ",",found
R640 T1034 T1035 nsubj we,found
R641 T1035 T1035 ROOT found,found
R643 T1037 T1038 det the,level
R645 T1039 T1038 prep of,level
R646 T1040 T1039 pobj IL-1Ra,of
R647 T1041 T1040 punct ",",IL-1Ra

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T681 139-145 Protein denotes IL-1Ra
T680 46-55 Negative_regulation denotes decreased
T679 0-10 Gene_expression denotes expression
T674 27-40 Protein denotes Bcl-2, C-IAP1
R366 T674 T679 themeOf "Bcl-2, C-IAP1",expression
R369 T679 T680 themeOf expression,decreased