PMC:3333881 / 5606-5856
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2200 | 3-11 | VB | denotes | enhances |
T2201 | 12-15 | DT | denotes | the |
T2202 | 16-19 | NN | denotes | DNA |
T2203 | 20-27 | NN | denotes | binding |
T2204 | 28-31 | CC | denotes | and |
T2205 | 32-47 | JJ | denotes | transcriptional |
T2206 | 48-56 | NN | denotes | activity |
T2207 | 57-59 | IN | denotes | of |
T2208 | 60-63 | DT | denotes | the |
T2209 | 64-69 | NN | denotes | NF-κB |
T2210 | 70-77 | NN | denotes | complex |
T2211 | 79-82 | DT | denotes | The |
T2212 | 83-86 | JJ | denotes | new |
T2213 | 87-96 | NN | denotes | mechanism |
T2214 | 97-99 | IN | denotes | of |
T2215 | 100-105 | NN | denotes | NF-κB |
T2216 | 106-118 | NN | denotes | deregulation |
T2217 | 119-123 | RB | denotes | here |
T2218 | 124-133 | VB | denotes | described |
T2219 | 134-137 | MD | denotes | may |
T2220 | 138-145 | VB | denotes | provide |
T2221 | 146-153 | JJ | denotes | further |
T2222 | 154-162 | NN | denotes | insights |
T2223 | 163-167 | IN | denotes | into |
T2224 | 168-171 | DT | denotes | the |
T2225 | 172-179 | JJ | denotes | chronic |
T2226 | 180-186 | JJ | denotes | immune |
T2227 | 187-197 | NN | denotes | activation |
T2228 | 198-200 | IN | denotes | of |
T2229 | 201-206 | NN | denotes | HIV-1 |
T2230 | 207-216 | NN | denotes | infection |
T4413 | 242-250 | NN | denotes | Plasmids |
R2033 | T2203 | T2202 | arg1Of | binding,DNA |
R2035 | T2203 | T2204 | arg1Of | binding,and |
R2036 | T2205 | T2204 | arg2Of | transcriptional,and |
R2037 | T2206 | T2200 | arg2Of | activity,enhances |
R2038 | T2206 | T2201 | arg1Of | activity,the |
R2039 | T2206 | T2203 | arg1Of | activity,binding |
R2040 | T2206 | T2205 | arg1Of | activity,transcriptional |
R2041 | T2206 | T2207 | arg1Of | activity,of |
R2042 | T2210 | T2207 | arg2Of | complex,of |
R2043 | T2210 | T2208 | arg1Of | complex,the |
R2044 | T2210 | T2209 | arg1Of | complex,NF-κB |
R2045 | T2213 | T2211 | arg1Of | mechanism,The |
R2046 | T2213 | T2212 | arg1Of | mechanism,new |
R2047 | T2213 | T2214 | arg1Of | mechanism,of |
R2048 | T2213 | T2219 | arg1Of | mechanism,may |
R2049 | T2213 | T2220 | arg1Of | mechanism,provide |
R2050 | T2216 | T2214 | arg2Of | deregulation,of |
R2051 | T2216 | T2215 | arg1Of | deregulation,NF-κB |
R2052 | T2216 | T2217 | arg1Of | deregulation,here |
R2053 | T2216 | T2218 | arg2Of | deregulation,described |
R2054 | T2220 | T2219 | arg2Of | provide,may |
R2055 | T2220 | T2223 | arg1Of | provide,into |
R2056 | T2222 | T2220 | arg2Of | insights,provide |
R2057 | T2222 | T2221 | arg1Of | insights,further |
R2058 | T2227 | T2223 | arg2Of | activation,into |
R2059 | T2227 | T2224 | arg1Of | activation,the |
R2060 | T2227 | T2225 | arg1Of | activation,chronic |
R2061 | T2227 | T2226 | arg1Of | activation,immune |
R2062 | T2227 | T2228 | arg1Of | activation,of |
R2063 | T2230 | T2228 | arg2Of | infection,of |
R2064 | T2230 | T2229 | arg1Of | infection,HIV-1 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3106 | 3-11 | VBZ | denotes | enhances |
T3107 | 12-15 | DT | denotes | the |
T3108 | 16-19 | NNP | denotes | DNA |
T3109 | 20-27 | JJ | denotes | binding |
T3110 | 28-31 | CC | denotes | and |
T3111 | 32-47 | JJ | denotes | transcriptional |
T3112 | 48-56 | NN | denotes | activity |
T3113 | 57-59 | IN | denotes | of |
T3114 | 60-63 | DT | denotes | the |
T3115 | 64-69 | NNP | denotes | NF-κB |
T3116 | 70-77 | NN | denotes | complex |
T3117 | 77-78 | . | denotes | . |
T3118 | 79-82 | DT | denotes | The |
T3119 | 83-86 | JJ | denotes | new |
T3120 | 87-96 | NN | denotes | mechanism |
T3121 | 97-99 | IN | denotes | of |
T3122 | 100-105 | JJ | denotes | NF-κB |
T3123 | 106-118 | NN | denotes | deregulation |
T3124 | 119-123 | RB | denotes | here |
T3125 | 124-133 | VBD | denotes | described |
T3126 | 134-137 | MD | denotes | may |
T3127 | 138-145 | VB | denotes | provide |
T3128 | 146-153 | JJ | denotes | further |
T3129 | 154-162 | NNS | denotes | insights |
T3130 | 163-167 | IN | denotes | into |
T3131 | 168-171 | DT | denotes | the |
T3132 | 172-179 | JJ | denotes | chronic |
T3133 | 180-186 | JJ | denotes | immune |
T3134 | 187-197 | NN | denotes | activation |
T3135 | 198-200 | IN | denotes | of |
T3136 | 201-206 | JJ | denotes | HIV-1 |
T3137 | 207-216 | NN | denotes | infection |
T3138 | 216-217 | . | denotes | . |
T4596 | 242-250 | NNP | denotes | Plasmids |
R2768 | T3107 | T3108 | det | the,DNA |
R2769 | T3108 | T3106 | dobj | DNA,enhances |
R2772 | T3109 | T3112 | amod | binding,activity |
R2774 | T3110 | T3109 | cc | and,binding |
R2775 | T3111 | T3109 | conj | transcriptional,binding |
R2776 | T3112 | T3106 | dobj | activity,enhances |
R2778 | T3113 | T3112 | prep | of,activity |
R2779 | T3114 | T3116 | det | the,complex |
R2780 | T3115 | T3116 | compound | NF-κB,complex |
R2781 | T3116 | T3113 | pobj | complex,of |
R2784 | T3118 | T3120 | det | The,mechanism |
R2785 | T3119 | T3120 | amod | new,mechanism |
R2787 | T3120 | T3125 | nsubj | mechanism,described |
R2788 | T3121 | T3120 | prep | of,mechanism |
R2790 | T3122 | T3123 | amod | NF-κB,deregulation |
R2792 | T3123 | T3121 | pobj | deregulation,of |
R2793 | T3124 | T3120 | advmod | here,mechanism |
R2794 | T3125 | T3125 | ROOT | described,described |
R2796 | T3126 | T3127 | aux | may,provide |
R2797 | T3127 | T3125 | ccomp | provide,described |
R2799 | T3128 | T3129 | amod | further,insights |
R2800 | T3129 | T3127 | dobj | insights,provide |
R2801 | T3130 | T3129 | prep | into,insights |
R2803 | T3131 | T3134 | det | the,activation |
R2804 | T3132 | T3134 | amod | chronic,activation |
R2805 | T3133 | T3134 | amod | immune,activation |
R2806 | T3134 | T3130 | pobj | activation,into |
R2807 | T3135 | T3134 | prep | of,activation |
R2808 | T3136 | T3137 | amod | HIV-1,infection |
R2810 | T3137 | T3135 | pobj | infection,of |
R2811 | T3138 | T3125 | punct | .,described |
R4150 | T4596 | T4596 | ROOT | Plasmids,Plasmids |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3169 | 32-47 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcriptional |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3227 | 16-27 | http://purl.obolibrary.org/obo/GO_0003677 | denotes | DNA binding |
T3233 | 20-27 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3208 | 64-77 | http://purl.obolibrary.org/obo/GO_0071159 | denotes | NF-κB complex |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1453 | 79-217 | Sentence | denotes | The new mechanism of NF-κB deregulation here described may provide further insights into the chronic immune activation of HIV-1 infection. |
T4409 | 242-250 | Sentence | denotes | Plasmids |
T35 | 79-217 | Sentence | denotes | The new mechanism of NF-κB deregulation here described may provide further insights into the chronic immune activation of HIV-1 infection. |
T36 | 219-240 | Sentence | denotes | MATERIALS AND METHODS |
T37 | 242-250 | Sentence | denotes | Plasmids |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4349 | 64-77 | Protein | denotes | NF-κB complex |
T4353 | 20-27 | Binding | denotes | binding |
T4354 | 3-11 | Positive_regulation | denotes | enhances |
T4355 | 3-11 | Positive_regulation | denotes | enhances |
T4356 | 100-105 | Protein | denotes | NF-κB |
T4357 | 106-118 | Regulation | denotes | deregulation |
R3988 | T4353 | T4354 | themeOf | binding,enhances |
R3989 | T4353 | T4355 | themeOf | binding,enhances |
R3991 | T4356 | T4357 | themeOf | NF-κB,deregulation |
R3986 | T4349 | T4353 | themeOf | NF-κB complex,binding |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1242 | 20-27 | Binding | denotes | binding |