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PMC:3333881 / 5606-5856 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2200 3-11 VB denotes enhances
T2201 12-15 DT denotes the
T2202 16-19 NN denotes DNA
T2203 20-27 NN denotes binding
T2204 28-31 CC denotes and
T2205 32-47 JJ denotes transcriptional
T2206 48-56 NN denotes activity
T2207 57-59 IN denotes of
T2208 60-63 DT denotes the
T2209 64-69 NN denotes NF-κB
T2210 70-77 NN denotes complex
T2211 79-82 DT denotes The
T2212 83-86 JJ denotes new
T2213 87-96 NN denotes mechanism
T2214 97-99 IN denotes of
T2215 100-105 NN denotes NF-κB
T2216 106-118 NN denotes deregulation
T2217 119-123 RB denotes here
T2218 124-133 VB denotes described
T2219 134-137 MD denotes may
T2220 138-145 VB denotes provide
T2221 146-153 JJ denotes further
T2222 154-162 NN denotes insights
T2223 163-167 IN denotes into
T2224 168-171 DT denotes the
T2225 172-179 JJ denotes chronic
T2226 180-186 JJ denotes immune
T2227 187-197 NN denotes activation
T2228 198-200 IN denotes of
T2229 201-206 NN denotes HIV-1
T2230 207-216 NN denotes infection
T4413 242-250 NN denotes Plasmids
R2033 T2203 T2202 arg1Of binding,DNA
R2035 T2203 T2204 arg1Of binding,and
R2036 T2205 T2204 arg2Of transcriptional,and
R2037 T2206 T2200 arg2Of activity,enhances
R2038 T2206 T2201 arg1Of activity,the
R2039 T2206 T2203 arg1Of activity,binding
R2040 T2206 T2205 arg1Of activity,transcriptional
R2041 T2206 T2207 arg1Of activity,of
R2042 T2210 T2207 arg2Of complex,of
R2043 T2210 T2208 arg1Of complex,the
R2044 T2210 T2209 arg1Of complex,NF-κB
R2045 T2213 T2211 arg1Of mechanism,The
R2046 T2213 T2212 arg1Of mechanism,new
R2047 T2213 T2214 arg1Of mechanism,of
R2048 T2213 T2219 arg1Of mechanism,may
R2049 T2213 T2220 arg1Of mechanism,provide
R2050 T2216 T2214 arg2Of deregulation,of
R2051 T2216 T2215 arg1Of deregulation,NF-κB
R2052 T2216 T2217 arg1Of deregulation,here
R2053 T2216 T2218 arg2Of deregulation,described
R2054 T2220 T2219 arg2Of provide,may
R2055 T2220 T2223 arg1Of provide,into
R2056 T2222 T2220 arg2Of insights,provide
R2057 T2222 T2221 arg1Of insights,further
R2058 T2227 T2223 arg2Of activation,into
R2059 T2227 T2224 arg1Of activation,the
R2060 T2227 T2225 arg1Of activation,chronic
R2061 T2227 T2226 arg1Of activation,immune
R2062 T2227 T2228 arg1Of activation,of
R2063 T2230 T2228 arg2Of infection,of
R2064 T2230 T2229 arg1Of infection,HIV-1

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3106 3-11 VBZ denotes enhances
T3107 12-15 DT denotes the
T3108 16-19 NNP denotes DNA
T3109 20-27 JJ denotes binding
T3110 28-31 CC denotes and
T3111 32-47 JJ denotes transcriptional
T3112 48-56 NN denotes activity
T3113 57-59 IN denotes of
T3114 60-63 DT denotes the
T3115 64-69 NNP denotes NF-κB
T3116 70-77 NN denotes complex
T3117 77-78 . denotes .
T3118 79-82 DT denotes The
T3119 83-86 JJ denotes new
T3120 87-96 NN denotes mechanism
T3121 97-99 IN denotes of
T3122 100-105 JJ denotes NF-κB
T3123 106-118 NN denotes deregulation
T3124 119-123 RB denotes here
T3125 124-133 VBD denotes described
T3126 134-137 MD denotes may
T3127 138-145 VB denotes provide
T3128 146-153 JJ denotes further
T3129 154-162 NNS denotes insights
T3130 163-167 IN denotes into
T3131 168-171 DT denotes the
T3132 172-179 JJ denotes chronic
T3133 180-186 JJ denotes immune
T3134 187-197 NN denotes activation
T3135 198-200 IN denotes of
T3136 201-206 JJ denotes HIV-1
T3137 207-216 NN denotes infection
T3138 216-217 . denotes .
T4596 242-250 NNP denotes Plasmids
R2768 T3107 T3108 det the,DNA
R2769 T3108 T3106 dobj DNA,enhances
R2772 T3109 T3112 amod binding,activity
R2774 T3110 T3109 cc and,binding
R2775 T3111 T3109 conj transcriptional,binding
R2776 T3112 T3106 dobj activity,enhances
R2778 T3113 T3112 prep of,activity
R2779 T3114 T3116 det the,complex
R2780 T3115 T3116 compound NF-κB,complex
R2781 T3116 T3113 pobj complex,of
R2784 T3118 T3120 det The,mechanism
R2785 T3119 T3120 amod new,mechanism
R2787 T3120 T3125 nsubj mechanism,described
R2788 T3121 T3120 prep of,mechanism
R2790 T3122 T3123 amod NF-κB,deregulation
R2792 T3123 T3121 pobj deregulation,of
R2793 T3124 T3120 advmod here,mechanism
R2794 T3125 T3125 ROOT described,described
R2796 T3126 T3127 aux may,provide
R2797 T3127 T3125 ccomp provide,described
R2799 T3128 T3129 amod further,insights
R2800 T3129 T3127 dobj insights,provide
R2801 T3130 T3129 prep into,insights
R2803 T3131 T3134 det the,activation
R2804 T3132 T3134 amod chronic,activation
R2805 T3133 T3134 amod immune,activation
R2806 T3134 T3130 pobj activation,into
R2807 T3135 T3134 prep of,activation
R2808 T3136 T3137 amod HIV-1,infection
R2810 T3137 T3135 pobj infection,of
R2811 T3138 T3125 punct .,described
R4150 T4596 T4596 ROOT Plasmids,Plasmids

GO-BP

Id Subject Object Predicate Lexical cue
T3169 32-47 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional

GO-MF

Id Subject Object Predicate Lexical cue
T3227 16-27 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T3233 20-27 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

GO-CC

Id Subject Object Predicate Lexical cue
T3208 64-77 http://purl.obolibrary.org/obo/GO_0071159 denotes NF-κB complex

sentences

Id Subject Object Predicate Lexical cue
T1453 79-217 Sentence denotes The new mechanism of NF-κB deregulation here described may provide further insights into the chronic immune activation of HIV-1 infection.
T4409 242-250 Sentence denotes Plasmids
T35 79-217 Sentence denotes The new mechanism of NF-κB deregulation here described may provide further insights into the chronic immune activation of HIV-1 infection.
T36 219-240 Sentence denotes MATERIALS AND METHODS
T37 242-250 Sentence denotes Plasmids

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T4349 64-77 Protein denotes NF-κB complex
T4353 20-27 Binding denotes binding
T4354 3-11 Positive_regulation denotes enhances
T4355 3-11 Positive_regulation denotes enhances
T4356 100-105 Protein denotes NF-κB
T4357 106-118 Regulation denotes deregulation
R3988 T4353 T4354 themeOf binding,enhances
R3989 T4353 T4355 themeOf binding,enhances
R3991 T4356 T4357 themeOf NF-κB,deregulation
R3986 T4349 T4353 themeOf NF-κB complex,binding

test2

Id Subject Object Predicate Lexical cue
T1242 20-27 Binding denotes binding