PMC:3333881 / 5129-5312
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3020","span":{"begin":4,"end":12},"obj":"NNS"},{"id":"T3021","span":{"begin":13,"end":22},"obj":"VBD"},{"id":"T3022","span":{"begin":23,"end":27},"obj":"IN"},{"id":"T3023","span":{"begin":28,"end":31},"obj":"NNP"},{"id":"T3024","span":{"begin":32,"end":41},"obj":"VBZ"},{"id":"T3025","span":{"begin":42,"end":49},"obj":"JJ"},{"id":"T3026","span":{"begin":50,"end":57},"obj":"NNS"},{"id":"T3027","span":{"begin":58,"end":66},"obj":"VBN"},{"id":"T3028","span":{"begin":67,"end":69},"obj":"IN"},{"id":"T3029","span":{"begin":70,"end":75},"obj":"JJ"},{"id":"T3030","span":{"begin":76,"end":85},"obj":"VBG"},{"id":"T3031","span":{"begin":85,"end":86},"obj":":"},{"id":"T3032","span":{"begin":87,"end":94},"obj":"RB"},{"id":"T3033","span":{"begin":94,"end":95},"obj":","},{"id":"T3034","span":{"begin":96,"end":98},"obj":"PRP"},{"id":"T3035","span":{"begin":99,"end":102},"obj":"VBD"},{"id":"T3036","span":{"begin":103,"end":110},"obj":"JJ"},{"id":"T3037","span":{"begin":111,"end":114},"obj":"WRB"},{"id":"T3038","span":{"begin":115,"end":118},"obj":"NNP"},{"id":"T3039","span":{"begin":119,"end":124},"obj":"MD"},{"id":"T3040","span":{"begin":125,"end":132},"obj":"VB"},{"id":"T3041","span":{"begin":133,"end":136},"obj":"DT"},{"id":"T3042","span":{"begin":137,"end":145},"obj":"JJ"},{"id":"T3043","span":{"begin":146,"end":154},"obj":"NN"},{"id":"T3044","span":{"begin":155,"end":157},"obj":"IN"},{"id":"T3045","span":{"begin":158,"end":163},"obj":"NNP"},{"id":"T3046","span":{"begin":163,"end":164},"obj":","},{"id":"T3047","span":{"begin":165,"end":170},"obj":"WDT"},{"id":"T3048","span":{"begin":171,"end":173},"obj":"VBZ"},{"id":"T3049","span":{"begin":174,"end":180},"obj":"RB"}],"relations":[{"id":"R2839","pred":"nsubj","subj":"T3020","obj":"T3021"},{"id":"R2840","pred":"ccomp","subj":"T3021","obj":"T3035"},{"id":"R2841","pred":"mark","subj":"T3022","obj":"T3024"},{"id":"R2842","pred":"nsubj","subj":"T3023","obj":"T3024"},{"id":"R2843","pred":"ccomp","subj":"T3024","obj":"T3021"},{"id":"R2844","pred":"amod","subj":"T3025","obj":"T3026"},{"id":"R2845","pred":"dobj","subj":"T3026","obj":"T3024"},{"id":"R2846","pred":"acl","subj":"T3027","obj":"T3026"},{"id":"R2847","pred":"prep","subj":"T3028","obj":"T3027"},{"id":"R2848","pred":"amod","subj":"T3029","obj":"T3030"},{"id":"R2849","pred":"prep","subj":"T3030","obj":"T3024"},{"id":"R2850","pred":"punct","subj":"T3031","obj":"T3035"},{"id":"R2851","pred":"advmod","subj":"T3032","obj":"T3035"},{"id":"R2852","pred":"punct","subj":"T3033","obj":"T3035"},{"id":"R2853","pred":"nsubj","subj":"T3034","obj":"T3035"},{"id":"R2854","pred":"ROOT","subj":"T3035","obj":"T3035"},{"id":"R2855","pred":"acomp","subj":"T3036","obj":"T3035"},{"id":"R2856","pred":"advmod","subj":"T3037","obj":"T3040"},{"id":"R2857","pred":"nsubj","subj":"T3038","obj":"T3040"},{"id":"R2858","pred":"aux","subj":"T3039","obj":"T3040"},{"id":"R2859","pred":"ccomp","subj":"T3040","obj":"T3035"},{"id":"R2860","pred":"det","subj":"T3041","obj":"T3043"},{"id":"R2861","pred":"amod","subj":"T3042","obj":"T3043"},{"id":"R2862","pred":"dobj","subj":"T3043","obj":"T3040"},{"id":"R2863","pred":"prep","subj":"T3044","obj":"T3043"},{"id":"R2864","pred":"pobj","subj":"T3045","obj":"T3044"},{"id":"R2865","pred":"punct","subj":"T3046","obj":"T3045"},{"id":"R2866","pred":"nsubj","subj":"T3047","obj":"T3048"},{"id":"R2867","pred":"relcl","subj":"T3048","obj":"T3045"}],"text":"ese findings suggested that Tat modulates crucial enzymes involved in NF-κB signaling; however, it was unclear how Tat could subvert the negative feedback of NF-κB, which is mainly de"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T3200","span":{"begin":76,"end":85},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T3202","span":{"begin":70,"end":85},"obj":"http://purl.obolibrary.org/obo/GO_0038061"}],"text":"ese findings suggested that Tat modulates crucial enzymes involved in NF-κB signaling; however, it was unclear how Tat could subvert the negative feedback of NF-κB, which is mainly de"}
events-check-again
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bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T4337","span":{"begin":70,"end":75},"obj":"Protein"},{"id":"T4338","span":{"begin":115,"end":118},"obj":"Protein"},{"id":"T4339","span":{"begin":158,"end":163},"obj":"Protein"}],"text":"ese findings suggested that Tat modulates crucial enzymes involved in NF-κB signaling; however, it was unclear how Tat could subvert the negative feedback of NF-κB, which is mainly de"}
test2
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bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1418","span":{"begin":28,"end":31},"obj":"Protein"},{"id":"T1419","span":{"begin":115,"end":118},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"ese findings suggested that Tat modulates crucial enzymes involved in NF-κB signaling; however, it was unclear how Tat could subvert the negative feedback of NF-κB, which is mainly de"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T2311","span":{"begin":28,"end":31},"obj":"Q8UMQ1"},{"id":"T2312","span":{"begin":28,"end":31},"obj":"P04605"},{"id":"T2313","span":{"begin":28,"end":31},"obj":"P04610"},{"id":"T2314","span":{"begin":28,"end":31},"obj":"P04608"},{"id":"T2315","span":{"begin":115,"end":118},"obj":"P04605"},{"id":"T2316","span":{"begin":115,"end":118},"obj":"Q8UMQ1"},{"id":"T2317","span":{"begin":115,"end":118},"obj":"P04608"},{"id":"T2318","span":{"begin":115,"end":118},"obj":"P04610"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"ese findings suggested that Tat modulates crucial enzymes involved in NF-κB signaling; however, it was unclear how Tat could subvert the negative feedback of NF-κB, which is mainly de"}