PMC:3333881 / 438-604
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T210 | 1-4 | NN | denotes | Tat |
| T211 | 5-19 | NN | denotes | transactivator |
| T212 | 20-29 | VB | denotes | activated |
| T213 | 30-35 | NN | denotes | NF-κB |
| T214 | 36-38 | IN | denotes | by |
| T215 | 39-48 | VB | denotes | hijacking |
| T216 | 49-52 | DT | denotes | the |
| T217 | 53-62 | NN | denotes | inhibitor |
| T218 | 63-68 | NN | denotes | IκB-α |
| T219 | 69-72 | CC | denotes | and |
| T220 | 73-75 | IN | denotes | by |
| T221 | 76-86 | VB | denotes | preventing |
| T222 | 87-90 | DT | denotes | the |
| T223 | 91-100 | NN | denotes | repressor |
| T224 | 101-108 | NN | denotes | binding |
| T225 | 109-111 | TO | denotes | to |
| T226 | 112-115 | DT | denotes | the |
| T227 | 116-121 | NN | denotes | NF-κB |
| T228 | 122-129 | NN | denotes | complex |
| T229 | 131-139 | RB | denotes | Moreover |
| T230 | 139-140 | -COMMA- | denotes | , |
| T231 | 141-144 | NN | denotes | Tat |
| T232 | 145-155 | VB | denotes | associated |
| T233 | 156-160 | IN | denotes | with |
| T234 | 161-164 | DT | denotes | the |
| R138 | T211 | T210 | arg1Of | transactivator,Tat |
| R139 | T211 | T212 | arg1Of | transactivator,activated |
| R140 | T211 | T215 | arg1Of | transactivator,hijacking |
| R141 | T211 | T221 | arg1Of | transactivator,preventing |
| R146 | T212 | T214 | arg1Of | activated,by |
| R147 | T212 | T220 | arg1Of | activated,by |
| R148 | T213 | T212 | arg2Of | NF-κB,activated |
| R149 | T214 | T219 | arg1Of | by,and |
| R150 | T215 | T214 | arg2Of | hijacking,by |
| R151 | T218 | T215 | arg2Of | IκB-α,hijacking |
| R152 | T218 | T216 | arg1Of | IκB-α,the |
| R153 | T218 | T217 | arg1Of | IκB-α,inhibitor |
| R154 | T220 | T219 | arg2Of | by,and |
| R155 | T221 | T220 | arg2Of | preventing,by |
| R156 | T224 | T221 | arg2Of | binding,preventing |
| R157 | T224 | T222 | arg1Of | binding,the |
| R158 | T224 | T223 | arg1Of | binding,repressor |
| R159 | T224 | T225 | arg1Of | binding,to |
| R160 | T228 | T225 | arg2Of | complex,to |
| R161 | T228 | T226 | arg1Of | complex,the |
| R162 | T228 | T227 | arg1Of | complex,NF-κB |
| R163 | T231 | T232 | arg1Of | Tat,associated |
| R165 | T232 | T233 | arg1Of | associated,with |
bionlp-st-ge-2016-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T356 | 87-100 | Anaphor | denotes | the repressor |
| T357 | 63-68 | Antecedent | denotes | IκB-α |
| R685 | T356 | T357 | boundBy | the repressor,IκB-α |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T473 | 1-4 | NNP | denotes | Tat |
| T474 | 5-19 | NN | denotes | transactivator |
| T475 | 20-29 | VBD | denotes | activated |
| T476 | 30-35 | JJ | denotes | NF-κB |
| T477 | 36-38 | IN | denotes | by |
| T478 | 39-48 | VBG | denotes | hijacking |
| T479 | 49-52 | DT | denotes | the |
| T480 | 53-62 | NN | denotes | inhibitor |
| T481 | 63-68 | NN | denotes | IκB-α |
| T482 | 69-72 | CC | denotes | and |
| T483 | 73-75 | IN | denotes | by |
| T484 | 76-86 | VBG | denotes | preventing |
| T485 | 87-90 | DT | denotes | the |
| T486 | 91-100 | NN | denotes | repressor |
| T487 | 101-108 | JJ | denotes | binding |
| T488 | 109-111 | TO | denotes | to |
| T489 | 112-115 | DT | denotes | the |
| T490 | 116-121 | JJ | denotes | NF-κB |
| T491 | 122-129 | NN | denotes | complex |
| T492 | 129-130 | . | denotes | . |
| T493 | 131-139 | RB | denotes | Moreover |
| T494 | 139-140 | , | denotes | , |
| T495 | 141-144 | NNP | denotes | Tat |
| T496 | 145-155 | VBN | denotes | associated |
| T497 | 156-160 | IN | denotes | with |
| T498 | 161-164 | DT | denotes | the |
| R364 | T473 | T474 | compound | Tat,transactivator |
| R365 | T474 | T475 | nsubj | transactivator,activated |
| R367 | T476 | T475 | dobj | NF-κB,activated |
| R368 | T477 | T475 | prep | by,activated |
| R369 | T478 | T477 | pcomp | hijacking,by |
| R370 | T479 | T481 | det | the,IκB-α |
| R371 | T480 | T481 | compound | inhibitor,IκB-α |
| R372 | T481 | T478 | dobj | IκB-α,hijacking |
| R373 | T482 | T477 | cc | and,by |
| R374 | T483 | T477 | conj | by,by |
| R375 | T484 | T483 | pcomp | preventing,by |
| R376 | T485 | T486 | det | the,repressor |
| R377 | T486 | T484 | dobj | repressor,preventing |
| R378 | T487 | T484 | oprd | binding,preventing |
| R379 | T488 | T487 | prep | to,binding |
| R380 | T489 | T491 | det | the,complex |
| R381 | T490 | T491 | amod | NF-κB,complex |
| R382 | T491 | T488 | pobj | complex,to |
| R384 | T493 | T496 | advmod | Moreover,associated |
| R385 | T494 | T496 | punct | ",",associated |
| R386 | T495 | T496 | npadvmod | Tat,associated |
| R387 | T496 | T496 | ROOT | associated,associated |
| R388 | T497 | T496 | prep | with,associated |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T634 | 20-35 | http://purl.obolibrary.org/obo/GO_0051092 | denotes | activated NF-κB |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T640 | 101-108 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T642 | 101-121 | http://purl.obolibrary.org/obo/GO_0051059 | denotes | binding to the NF-κB |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T644 | 116-129 | http://purl.obolibrary.org/obo/GO_0071159 | denotes | NF-κB complex |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T862 | 1-4 | Protein | denotes | Tat |
| T863 | 39-48 | Binding | denotes | hijacking |
| T864 | 63-68 | Protein | denotes | IκB-α |
| T865 | 76-86 | Negative_regulation | denotes | preventing |
| T866 | 101-108 | Binding | denotes | binding |
| T867 | 141-144 | Protein | denotes | Tat |
| T868 | 145-155 | Binding | denotes | associated |
| R743 | T862 | T863 | themeOf | Tat,hijacking |
| R744 | T862 | T865 | causeOf | Tat,preventing |
| R745 | T864 | T863 | themeOf | IκB-α,hijacking |
| R746 | T864 | T866 | themeOf | IκB-α,binding |
| R747 | T866 | T865 | themeOf | binding,preventing |
| R748 | T867 | T868 | themeOf | Tat,associated |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T914 | 30-35 | Protein | denotes | NF-κB |
| T915 | 63-68 | Protein | denotes | IκB-α |
| T916 | 116-129 | Protein | denotes | NF-κB complex |
| T917 | 20-29 | Positive_regulation | denotes | activated |
| T918 | 101-108 | Binding | denotes | binding |
| T919 | 76-86 | Negative_regulation | denotes | preventing |
| T920 | 141-144 | Protein | denotes | Tat |
| T924 | 145-155 | Binding | denotes | associated |
| R639 | T914 | T917 | themeOf | NF-κB,activated |
| R640 | T916 | T918 | themeOf | NF-κB complex,binding |
| R641 | T918 | T919 | themeOf | binding,preventing |
| R642 | T920 | T924 | themeOf | Tat,associated |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 1-4 | Protein | denotes | Tat |
| T51 | 39-48 | Binding | denotes | hijacking |
| T52 | 53-62 | Negative_regulation | denotes | inhibitor |
| T53 | 63-68 | Protein | denotes | IκB-α |
| T54 | 101-108 | Binding | denotes | binding |
| T55 | 141-144 | Protein | denotes | Tat |
| T56 | 145-155 | Binding | denotes | associated |
| R656 | T50 | T51 | themeOf | Tat,hijacking |
| R657 | T53 | T51 | themeOf | IκB-α,hijacking |
| R658 | T53 | T54 | themeOf | IκB-α,binding |
| R659 | T53 | T52 | themeOf | IκB-α,inhibitor |
| R661 | T55 | T56 | themeOf | Tat,associated |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T108 | 39-48 | Binding | denotes | hijacking |
| T110 | 76-86 | Negative_regulation | denotes | preventing |
| T111 | 101-108 | Binding | denotes | binding |
| T112 | 145-155 | Binding | denotes | associated |
| T136 | 63-68 | Protein | denotes | IκB-α |
| T137 | 141-144 | Protein | denotes | Tat |
| T134 | 1-4 | Protein | denotes | Tat |
| R683 | T134 | T108 | themeOf | Tat,hijacking |
| R684 | T134 | T110 | causeOf | Tat,preventing |
| R49 | T111 | T110 | themeOf | binding,preventing |
| R65 | T136 | T108 | themeOf | IκB-α,hijacking |
| R66 | T136 | T111 | themeOf | IκB-α,binding |
| R67 | T137 | T112 | themeOf | Tat,associated |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T364 | 1-4 | P04605 | denotes | Tat |
| T365 | 1-4 | P04610 | denotes | Tat |
| T366 | 1-4 | P04608 | denotes | Tat |
| T367 | 1-4 | Q8UMQ1 | denotes | Tat |
| T368 | 141-144 | P04610 | denotes | Tat |
| T369 | 141-144 | P04608 | denotes | Tat |
| T370 | 141-144 | P04605 | denotes | Tat |
| T371 | 141-144 | Q8UMQ1 | denotes | Tat |