PMC:3333881 / 4371-4571
Annnotations
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 22187158-7690421-77584420 | 93-95 | 7690421 | denotes | 35 |
| 22187158-8121496-77584421 | 105-107 | 8121496 | denotes | 36 |
| 22187158-12055184-77584422 | 117-119 | 12055184 | denotes | 37 |
| 22187158-15710476-77584423 | 130-132 | 15710476 | denotes | 38 |
| 22187158-7853496-77584424 | 151-153 | 7853496 | denotes | 39 |
| 22187158-9491887-77584425 | 154-156 | 9491887 | denotes | 40 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1975 | 10-13 | CC | denotes | and |
| T1976 | 14-24 | NN | denotes | elongation |
| T1977 | 25-27 | IN | denotes | by |
| T1978 | 28-39 | VB | denotes | interacting |
| T1979 | 40-44 | IN | denotes | with |
| T1980 | 45-56 | VB | denotes | transacting |
| T1981 | 57-64 | NN | denotes | factors |
| T1982 | 65-68 | CC | denotes | and |
| T1983 | 69-78 | NN | denotes | cofactors |
| T1984 | 78-79 | -COMMA- | denotes | , |
| T1985 | 80-84 | JJ | denotes | such |
| T1986 | 85-87 | IN | denotes | as |
| T1987 | 88-91 | NN | denotes | Sp1 |
| T1988 | 92-93 | -LRB- | denotes | ( |
| T1989 | 93-95 | CD | denotes | 35 |
| T1990 | 95-96 | -RRB- | denotes | ) |
| T1991 | 96-97 | -COMMA- | denotes | , |
| T1992 | 98-103 | NN | denotes | TFIID |
| T1993 | 104-105 | -LRB- | denotes | ( |
| T1994 | 105-107 | CD | denotes | 36 |
| T1995 | 107-108 | -RRB- | denotes | ) |
| T1996 | 108-109 | -COMMA- | denotes | , |
| T1997 | 110-115 | NN | denotes | E2F-4 |
| T1998 | 116-117 | -LRB- | denotes | ( |
| T1999 | 117-119 | CD | denotes | 37 |
| T2000 | 119-120 | -RRB- | denotes | ) |
| T2001 | 120-121 | -COMMA- | denotes | , |
| T2002 | 122-128 | NN | denotes | C/EBPβ |
| T2003 | 129-130 | -LRB- | denotes | ( |
| T2004 | 130-132 | CD | denotes | 38 |
| T2005 | 132-133 | -RRB- | denotes | ) |
| T2006 | 133-134 | -COMMA- | denotes | , |
| T2007 | 135-141 | NN | denotes | cyclin |
| T2008 | 142-149 | NN | denotes | T1/CDK9 |
| T2009 | 150-151 | -LRB- | denotes | ( |
| T2010 | 151-156 | CD | denotes | 39,40 |
| T2011 | 156-157 | -RRB- | denotes | ) |
| T2012 | 158-161 | CC | denotes | and |
| T2013 | 162-165 | DT | denotes | the |
| T2014 | 166-173 | NN | denotes | histone |
| T2015 | 174-192 | NN | denotes | acetyltransferases |
| R1752 | T1992 | T1991 | arg2Of | TFIID,"," |
| R1753 | T1992 | T1993 | arg1Of | TFIID,( |
| R1754 | T1994 | T1993 | arg2Of | 36,( |
| R1756 | T1995 | T1993 | arg3Of | ),( |
| R1757 | T1996 | T2001 | arg1Of | ",","," |
| R1759 | T1997 | T1996 | arg2Of | E2F-4,"," |
| R1760 | T1997 | T1998 | arg1Of | E2F-4,( |
| R1763 | T1999 | T1998 | arg2Of | 37,( |
| R1764 | T2000 | T1998 | arg3Of | ),( |
| R1765 | T2001 | T1986 | arg2Of | ",",as |
| R1767 | T2002 | T2003 | arg1Of | C/EBPβ,( |
| R1768 | T2002 | T2006 | arg1Of | C/EBPβ,"," |
| R1770 | T2004 | T2003 | arg2Of | 38,( |
| R1771 | T2005 | T2003 | arg3Of | ),( |
| R1772 | T2006 | T2012 | arg1Of | ",",and |
| R1773 | T2008 | T2006 | arg2Of | T1/CDK9,"," |
| R1774 | T2008 | T2007 | arg1Of | T1/CDK9,cyclin |
| R1775 | T2008 | T2009 | arg1Of | T1/CDK9,( |
| R1776 | T2010 | T2009 | arg2Of | "39,40",( |
| R1777 | T2011 | T2009 | arg3Of | ),( |
| R1778 | T2012 | T2001 | arg2Of | and,"," |
| R1782 | T2015 | T2013 | arg1Of | acetyltransferases,the |
| R1783 | T2015 | T2014 | arg1Of | acetyltransferases,histone |
| R1928 | T1976 | T1975 | arg2Of | elongation,and |
| R1933 | T1978 | T1977 | arg2Of | interacting,by |
| R1936 | T1978 | T1979 | arg1Of | interacting,with |
| R1937 | T1981 | T1982 | arg1Of | factors,and |
| R1958 | T1982 | T1979 | arg2Of | and,with |
| R1959 | T1982 | T1980 | arg1Of | and,transacting |
| R1963 | T1982 | T1984 | arg1Of | and,"," |
| R1964 | T1982 | T1986 | arg1Of | and,as |
| R1965 | T1983 | T1982 | arg2Of | cofactors,and |
| R1966 | T1986 | T1985 | arg1Of | as,such |
| R1973 | T1987 | T1988 | arg1Of | Sp1,( |
| R1976 | T1987 | T1991 | arg1Of | Sp1,"," |
| R1978 | T1989 | T1988 | arg2Of | 35,( |
| R1982 | T1990 | T1988 | arg3Of | ),( |
| R1986 | T1991 | T1996 | arg1Of | ",","," |
bionlp-st-ge-2016-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2231 | 45-78 | Anaphor | denotes | transacting factors and cofactors |
| T2232 | 88-91 | Antecedent | denotes | Sp1 |
| T2233 | 98-103 | Antecedent | denotes | TFIID |
| T2234 | 110-115 | Antecedent | denotes | E2F-4 |
| T2235 | 122-128 | Antecedent | denotes | C/EBPβ |
| T2236 | 135-144 | Antecedent | denotes | cyclin T1 |
| T2237 | 145-149 | Antecedent | denotes | CDK9 |
| T2238 | 162-192 | Anaphor | denotes | the histone acetyltransferases |
| T2239 | 193-197 | Antecedent | denotes | p300 |
| R2022 | T2231 | T2232 | boundBy | transacting factors and cofactors,Sp1 |
| R2023 | T2231 | T2233 | boundBy | transacting factors and cofactors,TFIID |
| R2024 | T2231 | T2234 | boundBy | transacting factors and cofactors,E2F-4 |
| R2025 | T2231 | T2235 | boundBy | transacting factors and cofactors,C/EBPβ |
| R2026 | T2231 | T2236 | boundBy | transacting factors and cofactors,cyclin T1 |
| R2027 | T2231 | T2237 | boundBy | transacting factors and cofactors,CDK9 |
| R2030 | T2238 | T2239 | boundBy | the histone acetyltransferases,p300 |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2873 | 10-13 | CC | denotes | and |
| T2874 | 14-24 | NN | denotes | elongation |
| T2875 | 25-27 | IN | denotes | by |
| T2876 | 28-39 | VBG | denotes | interacting |
| T2877 | 40-44 | IN | denotes | with |
| T2878 | 45-56 | VBG | denotes | transacting |
| T2879 | 57-64 | NNS | denotes | factors |
| T2880 | 65-68 | CC | denotes | and |
| T2881 | 69-78 | NNS | denotes | cofactors |
| T2882 | 78-79 | , | denotes | , |
| T2883 | 80-84 | JJ | denotes | such |
| T2884 | 85-87 | IN | denotes | as |
| T2885 | 88-91 | NNP | denotes | Sp1 |
| T2886 | 92-93 | -LRB- | denotes | ( |
| T2887 | 93-95 | CD | denotes | 35 |
| T2888 | 95-96 | -RRB- | denotes | ) |
| T2889 | 96-97 | , | denotes | , |
| T2890 | 98-103 | NNP | denotes | TFIID |
| T2891 | 104-105 | -LRB- | denotes | ( |
| T2892 | 105-107 | CD | denotes | 36 |
| T2893 | 107-108 | -RRB- | denotes | ) |
| T2894 | 108-109 | , | denotes | , |
| T2895 | 110-115 | NNP | denotes | E2F-4 |
| T2896 | 116-117 | -LRB- | denotes | ( |
| T2897 | 117-119 | CD | denotes | 37 |
| T2898 | 119-120 | -RRB- | denotes | ) |
| T2899 | 120-121 | , | denotes | , |
| T2900 | 122-127 | NNP | denotes | C/EBP |
| T2901 | 127-128 | NNP | denotes | β |
| T2902 | 129-130 | -LRB- | denotes | ( |
| T2903 | 130-132 | CD | denotes | 38 |
| T2904 | 132-133 | -RRB- | denotes | ) |
| T2905 | 133-134 | , | denotes | , |
| T2906 | 135-141 | NN | denotes | cyclin |
| T2907 | 142-149 | CD | denotes | T1/CDK9 |
| T2908 | 150-151 | -LRB- | denotes | ( |
| T2909 | 151-156 | CD | denotes | 39,40 |
| T2910 | 156-157 | -RRB- | denotes | ) |
| T2911 | 158-161 | CC | denotes | and |
| T2912 | 162-165 | DT | denotes | the |
| T2913 | 166-173 | NN | denotes | histone |
| T2914 | 174-192 | VBZ | denotes | acetyltransferases |
| R2591 | T2876 | T2875 | pcomp | interacting,by |
| R2592 | T2877 | T2876 | prep | with,interacting |
| R2593 | T2878 | T2879 | amod | transacting,factors |
| R2595 | T2879 | T2877 | pobj | factors,with |
| R2596 | T2880 | T2879 | cc | and,factors |
| R2597 | T2881 | T2879 | conj | cofactors,factors |
| R2599 | T2882 | T2881 | punct | ",",cofactors |
| R2600 | T2883 | T2884 | amod | such,as |
| R2601 | T2884 | T2879 | prep | as,factors |
| R2602 | T2885 | T2884 | pobj | Sp1,as |
| R2603 | T2886 | T2885 | punct | (,Sp1 |
| R2634 | T2907 | T2906 | nummod | T1/CDK9,cyclin |
| R2635 | T2908 | T2909 | punct | (,"39,40" |
| R2636 | T2909 | T2906 | appos | "39,40",cyclin |
| R2638 | T2910 | T2906 | punct | ),cyclin |
| R2639 | T2911 | T2906 | cc | and,cyclin |
| R2640 | T2912 | T2913 | det | the,histone |
| R2642 | T2913 | T2906 | conj | histone,cyclin |
| R2606 | T2887 | T2885 | appos | 35,Sp1 |
| R2607 | T2888 | T2885 | punct | ),Sp1 |
| R2608 | T2889 | T2885 | punct | ",",Sp1 |
| R2610 | T2890 | T2885 | conj | TFIID,Sp1 |
| R2611 | T2891 | T2890 | punct | (,TFIID |
| R2612 | T2892 | T2890 | appos | 36,TFIID |
| R2614 | T2893 | T2890 | punct | ),TFIID |
| R2615 | T2894 | T2890 | punct | ",",TFIID |
| R2617 | T2895 | T2890 | conj | E2F-4,TFIID |
| R2618 | T2896 | T2895 | punct | (,E2F-4 |
| R2620 | T2897 | T2895 | appos | 37,E2F-4 |
| R2622 | T2898 | T2895 | punct | ),E2F-4 |
| R2623 | T2899 | T2895 | punct | ",",E2F-4 |
| R2624 | T2900 | T2901 | compound | C/EBP,β |
| R2626 | T2901 | T2895 | conj | β,E2F-4 |
| R2627 | T2902 | T2901 | punct | (,β |
| R2628 | T2903 | T2901 | appos | 38,β |
| R2630 | T2904 | T2901 | punct | ),β |
| R2631 | T2905 | T2901 | punct | ",",β |
| R2632 | T2906 | T2914 | nmod | cyclin,acetyltransferases |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3198 | 135-141 | http://purl.obolibrary.org/obo/GO_0016538 | denotes | cyclin |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3242 | 135-141 | http://purl.obolibrary.org/obo/GO_0016538 | denotes | cyclin |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4138 | 28-39 | Binding | denotes | interacting |
| T4139 | 28-39 | Binding | denotes | interacting |
| T4140 | 28-39 | Binding | denotes | interacting |
| T4141 | 28-39 | Binding | denotes | interacting |
| T4142 | 28-39 | Binding | denotes | interacting |
| T4143 | 28-39 | Binding | denotes | interacting |
| T4144 | 28-39 | Binding | denotes | interacting |
| T4145 | 28-39 | Binding | denotes | interacting |
| T4146 | 28-39 | Binding | denotes | interacting |
| T4147 | 88-91 | Protein | denotes | Sp1 |
| T4148 | 98-103 | Protein | denotes | TFIID |
| T4149 | 110-115 | Protein | denotes | E2F-4 |
| T4150 | 122-128 | Protein | denotes | C/EBPβ |
| T4151 | 135-144 | Protein | denotes | cyclin T1 |
| T4152 | 145-149 | Protein | denotes | CDK9 |
| T4153 | 193-197 | Protein | denotes | p300 |
| R3725 | T4152 | T4143 | themeOf | CDK9,interacting |
| R3727 | T4153 | T4144 | themeOf | p300,interacting |
| R4009 | T4147 | T4139 | themeOf | Sp1,interacting |
| R4010 | T4148 | T4141 | themeOf | TFIID,interacting |
| R4011 | T4149 | T4140 | themeOf | E2F-4,interacting |
| R4012 | T4150 | T4138 | themeOf | C/EBPβ,interacting |
| R4013 | T4151 | T4142 | themeOf | cyclin T1,interacting |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4288 | 88-103 | Protein | denotes | Sp1 (35), TFIID |
| T4289 | 110-115 | Protein | denotes | E2F-4 |
| T4290 | 122-128 | Protein | denotes | C/EBPβ |
| T4291 | 135-149 | Protein | denotes | cyclin T1/CDK9 |
| T4292 | 166-192 | Protein | denotes | histone acetyltransferases |
| T4293 | 193-197 | Protein | denotes | p300 |
| T4295 | 28-39 | Binding | denotes | interacting |
| T4296 | 28-39 | Binding | denotes | interacting |
| T4297 | 28-39 | Binding | denotes | interacting |
| T4298 | 28-39 | Binding | denotes | interacting |
| T4299 | 28-39 | Binding | denotes | interacting |
| T4300 | 28-39 | Binding | denotes | interacting |
| T4301 | 28-39 | Binding | denotes | interacting |
| T4302 | 28-39 | Binding | denotes | interacting |
| T4303 | 28-39 | Binding | denotes | interacting |
| T4304 | 28-39 | Binding | denotes | interacting |
| T4305 | 28-39 | Binding | denotes | interacting |
| T4306 | 28-39 | Binding | denotes | interacting |
| T4307 | 28-39 | Binding | denotes | interacting |
| T4308 | 28-39 | Binding | denotes | interacting |
| T4309 | 28-39 | Binding | denotes | interacting |
| T4310 | 28-39 | Binding | denotes | interacting |
| T4311 | 28-39 | Binding | denotes | interacting |
| T4312 | 28-39 | Binding | denotes | interacting |
| T4313 | 28-39 | Binding | denotes | interacting |
| T4314 | 28-39 | Binding | denotes | interacting |
| T4315 | 28-39 | Binding | denotes | interacting |
| R3908 | T4289 | T4295 | themeOf | E2F-4,interacting |
| R3909 | T4289 | T4301 | themeOf | E2F-4,interacting |
| R3910 | T4289 | T4302 | themeOf | E2F-4,interacting |
| R3911 | T4289 | T4303 | themeOf | E2F-4,interacting |
| R3912 | T4290 | T4296 | themeOf | C/EBPβ,interacting |
| R3913 | T4290 | T4304 | themeOf | C/EBPβ,interacting |
| R3914 | T4290 | T4305 | themeOf | C/EBPβ,interacting |
| R3915 | T4290 | T4306 | themeOf | C/EBPβ,interacting |
| R3916 | T4290 | T4313 | themeOf | C/EBPβ,interacting |
| R3917 | T4291 | T4297 | themeOf | cyclin T1/CDK9,interacting |
| R3918 | T4291 | T4307 | themeOf | cyclin T1/CDK9,interacting |
| R3919 | T4291 | T4308 | themeOf | cyclin T1/CDK9,interacting |
| R3920 | T4291 | T4309 | themeOf | cyclin T1/CDK9,interacting |
| R3921 | T4291 | T4314 | themeOf | cyclin T1/CDK9,interacting |
| R3922 | T4292 | T4298 | themeOf | histone acetyltransferases,interacting |
| R3923 | T4292 | T4301 | themeOf | histone acetyltransferases,interacting |
| R3924 | T4292 | T4304 | themeOf | histone acetyltransferases,interacting |
| R3925 | T4292 | T4307 | themeOf | histone acetyltransferases,interacting |
| R3926 | T4292 | T4310 | themeOf | histone acetyltransferases,interacting |
| R3927 | T4292 | T4311 | themeOf | histone acetyltransferases,interacting |
| R3928 | T4292 | T4313 | themeOf | histone acetyltransferases,interacting |
| R3929 | T4292 | T4314 | themeOf | histone acetyltransferases,interacting |
| R3930 | T4292 | T4315 | themeOf | histone acetyltransferases,interacting |
| R3931 | T4293 | T4299 | themeOf | p300,interacting |
| R3932 | T4293 | T4302 | themeOf | p300,interacting |
| R3933 | T4293 | T4305 | themeOf | p300,interacting |
| R3934 | T4293 | T4308 | themeOf | p300,interacting |
| R3935 | T4293 | T4310 | themeOf | p300,interacting |
| R3936 | T4293 | T4312 | themeOf | p300,interacting |
| R3937 | T4293 | T4313 | themeOf | p300,interacting |
| R3938 | T4293 | T4314 | themeOf | p300,interacting |
| R3939 | T4293 | T4315 | themeOf | p300,interacting |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1200 | 28-39 | Binding | denotes | interacting |
| T1201 | 88-91 | Protein | denotes | Sp1 |
| T1202 | 98-103 | Protein | denotes | TFIID |
| T1203 | 110-115 | Protein | denotes | E2F-4 |
| T1204 | 122-128 | Protein | denotes | C/EBPβ |
| T1205 | 135-144 | Protein | denotes | cyclin T1 |
| T1206 | 145-149 | Protein | denotes | CDK9 |
| T1207 | 193-197 | Protein | denotes | p300 |
| R1023 | T1201 | T1200 | themeOf | Sp1,interacting |
| R1024 | T1202 | T1200 | themeOf | TFIID,interacting |
| R1025 | T1203 | T1200 | themeOf | E2F-4,interacting |
| R1026 | T1204 | T1200 | themeOf | C/EBPβ,interacting |
| R1027 | T1205 | T1200 | themeOf | cyclin T1,interacting |
| R1028 | T1206 | T1200 | themeOf | CDK9,interacting |
| R1029 | T1207 | T1200 | themeOf | p300,interacting |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1383 | 28-39 | Binding | denotes | interacting |
| T1384 | 28-39 | Binding | denotes | interacting |
| T1385 | 28-39 | Binding | denotes | interacting |
| T1386 | 28-39 | Binding | denotes | interacting |
| T1387 | 28-39 | Binding | denotes | interacting |
| T1388 | 28-39 | Binding | denotes | interacting |
| T1389 | 28-39 | Binding | denotes | interacting |
| T1390 | 28-39 | Binding | denotes | interacting |
| T1391 | 28-39 | Binding | denotes | interacting |
| T1392 | 88-91 | Protein | denotes | Sp1 |
| T1393 | 98-103 | Protein | denotes | TFIID |
| T1394 | 110-115 | Protein | denotes | E2F-4 |
| T1395 | 122-128 | Protein | denotes | C/EBPβ |
| T1396 | 135-144 | Protein | denotes | cyclin T1 |
| T1397 | 145-149 | Protein | denotes | CDK9 |
| T1398 | 193-197 | Protein | denotes | p300 |
| R1249 | T1392 | T1384 | themeOf | Sp1,interacting |
| R1250 | T1393 | T1386 | themeOf | TFIID,interacting |
| R1251 | T1394 | T1385 | themeOf | E2F-4,interacting |
| R1252 | T1395 | T1383 | themeOf | C/EBPβ,interacting |
| R1253 | T1396 | T1387 | themeOf | cyclin T1,interacting |
| R1254 | T1397 | T1388 | themeOf | CDK9,interacting |
| R1255 | T1398 | T1389 | themeOf | p300,interacting |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2290 | 88-91 | P08047 | denotes | Sp1 |
| T2291 | 166-197 | Q09472 | denotes | histone acetyltransferases p300 |
| T2292 | 193-197 | Q09472 | denotes | p300 |