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PMC:3333881 / 35100-39525 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T17795 0-2 IN denotes In
T17796 3-17 JJ denotes HIV-1-infected
T17797 18-27 NN denotes monocytes
T17798 28-31 NN denotes Tat
T17799 32-40 VB denotes sustains
T17800 41-44 DT denotes the
T17801 45-50 NN denotes NF-κB
T17802 51-59 NN denotes activity
T17803 60-63 CC denotes and
T17804 64-72 VB denotes promotes
T17805 73-76 DT denotes the
T17806 77-92 JJ denotes transcriptional
T17807 93-103 NN denotes activation
T17808 104-106 IN denotes of
T17809 107-113 NN denotes MIP-1α
T17810 114-116 IN denotes by
T17811 117-128 VB denotes interacting
T17812 129-133 IN denotes with
T17813 134-139 NN denotes IκB-α
T17814 140-143 CC denotes and
T17815 144-147 NN denotes p65
T17816 148-150 PRP denotes We
T17817 151-155 RB denotes next
T17818 156-164 VB denotes analysed
T17819 165-172 IN denotes whether
T17820 173-176 NN denotes Tat
T17821 177-185 VB denotes affected
T17822 186-189 DT denotes the
T17823 190-195 NN denotes NF-κB
T17824 196-204 NN denotes activity
T17825 205-208 CC denotes and
T17826 209-212 DT denotes the
T17827 213-223 NN denotes expression
T17828 224-226 IN denotes of
T17829 227-233 NN denotes MIP-1α
T17830 234-236 IN denotes in
T17831 237-240 DT denotes the
T17832 241-247 NN denotes course
T17833 248-250 IN denotes of
T17834 251-256 NN denotes HIV-1
T17835 257-266 NN denotes infection
T17836 268-270 TO denotes To
T17837 271-277 VB denotes detect
T17838 278-281 DT denotes the
T17839 282-285 NN denotes Tat
T17840 286-293 NN denotes protein
T17841 293-294 -COMMA- denotes ,
T17842 295-297 PRP denotes we
T17843 298-306 VB denotes produced
T17844 307-311 NN denotes HXB2
T17845 312-327 JJ denotes Env-pseudotyped
T17846 328-347 NN denotes NL4-3.FLAG-Tat.R−E−
T17847 348-355 NN denotes virions
T17848 355-356 -COMMA- denotes ,
T17849 357-362 WDT denotes which
T17850 363-367 VB denotes were
T17851 368-372 VB denotes used
T17852 373-375 IN denotes in
T17853 376-388 JJ denotes single-round
T17854 389-398 NN denotes infection
T17855 399-401 IN denotes of
T17856 402-406 NN denotes U937
T17857 406-407 -COMMA- denotes ,
T17858 408-409 DT denotes a
T17859 410-415 JJ denotes human
T17860 416-425 JJ denotes monocytic
T17861 426-430 NN denotes cell
T17862 431-435 NN denotes line
T17863 437-442 NN denotes Cells
T17864 443-447 VB denotes were
T17865 448-459 VB denotes transfected
T17866 460-464 IN denotes with
T17867 465-470 NN denotes siRNA
T17868 471-474 NN denotes Tat
T17869 474-475 -COMMA- denotes ,
T17870 476-481 NN denotes siRNA
T17871 482-489 NN denotes control
T17872 490-492 CC denotes or
T17873 493-497 VB denotes left
T17874 498-511 JJ denotes untransfected
T17875 512-514 TO denotes to
T17876 515-523 VB denotes modulate
T17877 524-527 DT denotes the
T17878 528-531 NN denotes Tat
T17879 532-542 NN denotes expression
T17880 542-543 -COMMA- denotes ,
T17881 544-547 CC denotes and
T17882 548-552 RB denotes then
T17883 553-561 VB denotes analysed
T17884 562-565 IN denotes for
T17885 566-569 DT denotes the
T17886 570-577 NN denotes kinetic
T17887 578-580 IN denotes of
T17888 581-586 NN denotes NF-κB
T17889 587-597 NN denotes activation
T17890 598-607 VB denotes following
T17891 608-613 JJ denotes viral
T17892 614-623 NN denotes infection
T17893 625-628 DT denotes The
T17894 629-639 NN denotes expression
T17895 640-642 IN denotes of
T17896 643-646 NN denotes Tat
T17897 647-650 CC denotes and
T17898 651-654 NN denotes p24
T17899 655-658 VB denotes was
T17900 659-667 VB denotes detected
T17901 668-670 IN denotes at
T17902 671-673 CD denotes 3-
T17903 674-676 TO denotes to
T17904 677-681 JJ denotes 12-h
T17905 682-696 NN denotes post-infection
T17906 696-697 -COMMA- denotes ,
T17907 698-703 IN denotes while
T17908 704-706 PRP denotes it
T17909 707-710 VB denotes was
T17910 711-717 RB denotes barely
T17911 718-726 VB denotes detected
T17912 727-729 IN denotes in
T17913 730-735 NN denotes siRNA
T17914 736-751 JJ denotes Tat-transfected
T17915 752-757 NN denotes cells
T17916 758-759 -LRB- denotes (
T17917 759-765 NN denotes Figure
T17918 766-768 NN denotes 6A
T17919 768-769 -RRB- denotes )
T17920 3026-3029 DT denotes The
T17921 3030-3035 NN denotes NF-κB
T17922 3036-3044 NN denotes activity
T17923 3044-3045 -COMMA- denotes ,
T17924 3046-3048 IN denotes as
T17925 3049-3057 VB denotes measured
T17926 3058-3060 IN denotes by
T17927 3061-3064 NN denotes p65
T17928 3065-3068 NN denotes DNA
T17929 3069-3076 NN denotes binding
T17930 3076-3077 -COMMA- denotes ,
T17931 3078-3081 VB denotes was
T17932 3082-3089 VB denotes induced
T17933 3090-3092 IN denotes at
T17934 3093-3096 JJ denotes 3-h
T17935 3097-3111 NN denotes post-infection
T17936 3112-3114 IN denotes in
T17937 3115-3119 CC denotes both
T17938 3120-3132 JJ denotes Tat-positive
T17939 3133-3134 -LRB- denotes (
T17940 3134-3136 DT denotes no
T17941 3137-3142 NN denotes siRNA
T17942 3143-3146 CC denotes and
T17943 3147-3152 NN denotes siRNA
T17944 3153-3160 NN denotes control
T17945 3160-3161 -RRB- denotes )
T17946 3162-3165 CC denotes and
T17947 3166-3178 JJ denotes Tat-negative
T17948 3179-3184 NN denotes cells
T17949 3185-3186 -LRB- denotes (
T17950 3186-3191 NN denotes siRNA
T17951 3192-3195 NN denotes Tat
T17952 3195-3196 -RRB- denotes )
T17953 3196-3197 -COMMA- denotes ,
T17954 3198-3201 CC denotes and
T17955 3202-3211 VB denotes increased
T17956 3212-3214 IN denotes at
T17957 3215-3219 NN denotes 12 h
T17958 3220-3224 RB denotes only
T17959 3225-3227 IN denotes in
T17960 3228-3240 JJ denotes Tat-positive
T17961 3241-3246 NN denotes cells
T17962 3247-3248 -LRB- denotes (
T17963 3248-3254 NN denotes Figure
T17964 3255-3257 NN denotes 6B
T17965 3257-3258 -RRB- denotes )
T17966 3260-3271 NN denotes Degradation
T17967 3272-3274 IN denotes of
T17968 3275-3280 NN denotes IκB-α
T17969 3281-3284 VB denotes was
T17970 3285-3293 VB denotes observed
T17971 3294-3296 IN denotes at
T17972 3297-3300 JJ denotes 3-h
T17973 3301-3315 NN denotes post-infection
T17974 3315-3316 -COMMA- denotes ,
T17975 3317-3320 CC denotes and
T17976 3321-3324 VB denotes was
T17977 3325-3333 VB denotes followed
T17978 3334-3336 IN denotes by
T17979 3337-3339 FW denotes de
T17980 3340-3344 FW denotes novo
T17981 3345-3354 NN denotes synthesis
T17982 3355-3357 IN denotes of
T17983 3358-3363 NN denotes IκB-α
T17984 3364-3366 IN denotes at
T17985 3367-3371 CD denotes 12 h
T17986 3372-3385 RB denotes independently
T17987 3386-3388 IN denotes of
T17988 3389-3392 DT denotes the
T17989 3393-3396 NN denotes Tat
T17990 3397-3405 NN denotes presence
T17991 3406-3407 -LRB- denotes (
T17992 3407-3413 NN denotes Figure
T17993 3414-3416 NN denotes 6C
T17994 3416-3417 -RRB- denotes )
T17995 3419-3431 RB denotes Consistently
T17996 3431-3432 -COMMA- denotes ,
T17997 3433-3436 DT denotes the
T17998 3437-3440 NN denotes IKK
T17999 3441-3449 NN denotes activity
T18000 3450-3453 VB denotes was
T18001 3454-3461 VB denotes induced
T18002 3462-3464 IN denotes at
T18003 3465-3468 JJ denotes 3-h
T18004 3469-3483 NN denotes post-infection
T18005 3484-3487 CC denotes and
T18006 3488-3494 VB denotes turned
T18007 3495-3498 RP denotes off
T18008 3499-3501 IN denotes at
T18009 3502-3506 CD denotes 12 h
T18010 3507-3520 RB denotes independently
T18011 3521-3523 IN denotes of
T18012 3524-3527 DT denotes the
T18013 3528-3531 NN denotes Tat
T18014 3532-3540 NN denotes presence
T18015 3541-3542 -LRB- denotes (
T18016 3542-3548 NN denotes Figure
T18017 3549-3551 NN denotes 6D
T18018 3551-3552 -RRB- denotes )
T18019 3554-3559 DT denotes These
T18020 3560-3567 NN denotes results
T18021 3568-3574 VB denotes agreed
T18022 3575-3579 IN denotes with
T18023 3580-3583 DT denotes the
T18024 3584-3591 NN denotes kinetic
T18025 3592-3594 IN denotes of
T18026 3595-3600 NN denotes NF-κB
T18027 3601-3611 NN denotes activation
T18028 3612-3614 IN denotes in
T18029 3615-3627 JJ denotes single-round
T18030 3628-3633 NN denotes HIV-1
T18031 3634-3643 NN denotes infection
T18032 3644-3646 IN denotes of
T18033 3647-3653 NN denotes Jurkat
T18034 3654-3659 NN denotes cells
T18035 3660-3661 -LRB- denotes (
T18036 3661-3667 NN denotes Figure
T18037 3668-3669 CD denotes 1
T18038 3669-3670 -RRB- denotes )
T18039 3670-3671 -COMMA- denotes ,
T18040 3672-3675 CC denotes and
T18041 3676-3683 RB denotes further
T18042 3684-3693 VB denotes supported
T18043 3694-3697 DT denotes the
T18044 3698-3709 NN denotes requirement
T18045 3710-3712 IN denotes of
T18046 3713-3718 JJ denotes viral
T18047 3719-3729 NN denotes expression
T18048 3730-3732 TO denotes to
T18049 3733-3743 VB denotes counteract
T18050 3744-3747 DT denotes the
T18051 3748-3763 JJ denotes post-activation
T18052 3764-3768 NN denotes turn
T18053 3769-3772 RP denotes off
T18054 3773-3775 IN denotes of
T18055 3776-3781 NN denotes NF-κB
T18056 3783-3785 IN denotes In
T18057 3786-3800 JJ denotes HIV-1-infected
T18058 3801-3805 NN denotes U937
T18059 3806-3811 NN denotes cells
T18060 3811-3812 -COMMA- denotes ,
T18061 3813-3816 DT denotes the
T18062 3817-3827 JJ denotes endogenous
T18063 3828-3831 NN denotes Tat
T18064 3832-3835 VB denotes was
T18065 3836-3856 VB denotes coimmunoprecipitated
T18066 3857-3861 IN denotes with
T18067 3862-3867 NN denotes IκB-α
T18068 3868-3871 CC denotes and
T18069 3872-3875 NN denotes p65
T18070 3876-3877 -LRB- denotes (
T18071 3877-3883 NN denotes Figure
T18072 3884-3886 NN denotes 6E
T18073 3886-3887 -RRB- denotes )
T18074 3887-3888 -COMMA- denotes ,
T18075 3889-3892 CC denotes and
T18076 3893-3902 VB denotes activated
T18077 3903-3906 DT denotes the
T18078 3907-3913 NN denotes MIP-1α
T18079 3914-3924 NN denotes expression
T18080 3925-3927 IN denotes in
T18081 3928-3929 DT denotes a
T18082 3930-3943 JJ denotes p65-dependent
T18083 3944-3950 NN denotes manner
T18084 3950-3951 -COMMA- denotes ,
T18085 3952-3954 IN denotes as
T18086 3955-3960 VB denotes shown
T18087 3961-3963 IN denotes by
T18088 3964-3967 DT denotes the
T18089 3968-3972 NN denotes lack
T18090 3973-3975 IN denotes of
T18091 3976-3982 NN denotes effect
T18092 3983-3992 VB denotes following
T18093 3993-3996 NN denotes RNA
T18094 3997-4009 NN denotes interference
T18095 4010-4012 IN denotes of
T18096 4013-4016 NN denotes Tat
T18097 4017-4019 CC denotes or
T18098 4020-4023 NN denotes p65
T18099 4024-4025 -LRB- denotes (
T18100 4025-4031 NN denotes Figure
T18101 4032-4034 NN denotes 6F
T18102 4034-4035 -RRB- denotes )
T18103 4037-4045 RB denotes Moreover
T18104 4045-4046 -COMMA- denotes ,
T18105 4047-4050 NN denotes Tat
T18106 4051-4054 CC denotes and
T18107 4055-4058 NN denotes p65
T18108 4059-4063 VB denotes were
T18109 4064-4068 DT denotes both
T18110 4069-4078 VB denotes recruited
T18111 4079-4081 TO denotes to
T18112 4082-4085 DT denotes the
T18113 4086-4091 NN denotes NF-κB
T18114 4092-4100 NN denotes enhancer
T18115 4101-4103 IN denotes of
T18116 4104-4110 NN denotes MIP-1α
T18117 4110-4111 -COMMA- denotes ,
T18118 4112-4117 IN denotes while
T18119 4118-4121 DT denotes the
T18120 4122-4125 NN denotes p65
T18121 4126-4135 NN denotes occupancy
T18122 4136-4139 VB denotes was
T18123 4140-4149 VB denotes abolished
T18124 4150-4152 IN denotes by
T18125 4153-4158 NN denotes siRNA
T18126 4159-4162 NN denotes Tat
T18127 4163-4164 -LRB- denotes (
T18128 4164-4170 NN denotes Figure
T18129 4171-4173 NN denotes 6G
T18130 4174-4177 CC denotes and
T18131 4178-4179 NN denotes H
T18132 4179-4180 -RRB- denotes )
T18133 4182-4192 RB denotes Altogether
T18134 4193-4198 DT denotes these
T18135 4199-4206 NN denotes results
T18136 4207-4216 VB denotes indicated
T18137 4217-4221 IN denotes that
T18138 4222-4224 IN denotes in
T18139 4225-4231 JJ denotes single
T18140 4232-4237 JJ denotes round
T18141 4238-4243 NN denotes HIV-1
T18142 4244-4253 NN denotes infection
T18143 4254-4257 NN denotes Tat
T18144 4258-4268 VB denotes associated
T18145 4269-4273 IN denotes with
T18146 4274-4279 NN denotes IκB-α
T18147 4280-4283 CC denotes and
T18148 4284-4287 NN denotes p65
T18149 4287-4288 -COMMA- denotes ,
T18150 4289-4292 CC denotes and
T18151 4293-4300 VB denotes induced
T18152 4301-4304 DT denotes the
T18153 4305-4318 JJ denotes p65-dependent
T18154 4319-4329 NN denotes activation
T18155 4330-4332 IN denotes of
T18156 4333-4339 NN denotes MIP-1α
T18157 4340-4350 NN denotes expression
T18158 4351-4358 IN denotes through
T18159 4359-4368 NN denotes occupancy
T18160 4369-4371 IN denotes of
T18161 4372-4375 DT denotes the
T18162 4376-4382 NN denotes MIP-1α
T18163 4383-4391 NN denotes promoter
T18164 4392-4395 CC denotes and
T18165 4396-4405 VB denotes increased
T18166 4406-4417 NN denotes recruitment
T18167 4418-4420 IN denotes of
T18168 4421-4424 NN denotes p65
R14250 T17797 T17795 arg2Of monocytes,In
R14251 T17797 T17796 arg1Of monocytes,HIV-1-infected
R14252 T17798 T17799 arg1Of Tat,sustains
R14253 T17798 T17804 arg1Of Tat,promotes
R14254 T17798 T17811 arg1Of Tat,interacting
R14255 T17799 T17803 arg1Of sustains,and
R14256 T17802 T17799 arg2Of activity,sustains
R14257 T17802 T17800 arg1Of activity,the
R14258 T17802 T17801 arg1Of activity,NF-κB
R14259 T17803 T17795 arg1Of and,In
R14260 T17803 T17810 arg1Of and,by
R14261 T17804 T17803 arg2Of promotes,and
R14262 T17807 T17804 arg2Of activation,promotes
R14263 T17807 T17805 arg1Of activation,the
R14264 T17807 T17806 arg1Of activation,transcriptional
R14265 T17807 T17808 arg1Of activation,of
R14266 T17809 T17808 arg2Of MIP-1α,of
R14267 T17811 T17810 arg2Of interacting,by
R14268 T17811 T17812 arg1Of interacting,with
R14269 T17813 T17814 arg1Of IκB-α,and
R14270 T17814 T17812 arg2Of and,with
R14271 T17815 T17814 arg2Of p65,and
R14272 T17816 T17818 arg2Of We,analysed
R14273 T17818 T17817 arg1Of analysed,next
R14274 T17820 T17821 arg1Of Tat,affected
R14275 T17821 T17818 arg1Of affected,analysed
R14276 T17821 T17819 arg1Of affected,whether
R14277 T17821 T17830 arg1Of affected,in
R14278 T17824 T17822 arg1Of activity,the
R14279 T17824 T17823 arg1Of activity,NF-κB
R14280 T17824 T17825 arg1Of activity,and
R14281 T17825 T17821 arg2Of and,affected
R14282 T17827 T17825 arg2Of expression,and
R14283 T17827 T17826 arg1Of expression,the
R14284 T17827 T17828 arg1Of expression,of
R14285 T17829 T17828 arg2Of MIP-1α,of
R14286 T17832 T17830 arg2Of course,in
R14287 T17832 T17831 arg1Of course,the
R14288 T17832 T17833 arg1Of course,of
R14289 T17835 T17833 arg2Of infection,of
R14290 T17835 T17834 arg1Of infection,HIV-1
R14291 T17837 T17836 arg1Of detect,To
R14292 T17840 T17837 arg2Of protein,detect
R14293 T17840 T17838 arg1Of protein,the
R14294 T17840 T17839 arg1Of protein,Tat
R14295 T17842 T17837 arg1Of we,detect
R14296 T17842 T17843 arg1Of we,produced
R14297 T17843 T17836 modOf produced,To
R14298 T17843 T17841 arg1Of produced,","
R14299 T17847 T17843 arg2Of virions,produced
R14300 T17847 T17844 arg1Of virions,HXB2
R14301 T17847 T17845 arg1Of virions,Env-pseudotyped
R14302 T17847 T17846 arg1Of virions,NL4-3.FLAG-Tat.R−E−
R14303 T17847 T17848 arg1Of virions,","
R14304 T17847 T17849 arg1Of virions,which
R14305 T17847 T17850 arg1Of virions,were
R14306 T17847 T17851 arg2Of virions,used
R14307 T17851 T17850 arg2Of used,were
R14308 T17851 T17852 arg1Of used,in
R14309 T17854 T17852 arg2Of infection,in
R14310 T17854 T17853 arg1Of infection,single-round
R14311 T17854 T17855 arg1Of infection,of
R14312 T17856 T17855 arg2Of U937,of
R14313 T17856 T17857 arg1Of U937,","
R14314 T17862 T17857 arg2Of line,","
R14315 T17862 T17858 arg1Of line,a
R14316 T17862 T17859 arg1Of line,human
R14317 T17862 T17860 arg1Of line,monocytic
R14318 T17862 T17861 arg1Of line,cell
R14319 T17863 T17864 arg1Of Cells,were
R14320 T17863 T17865 arg2Of Cells,transfected
R14321 T17863 T17873 arg1Of Cells,left
R14322 T17863 T17876 arg1Of Cells,modulate
R14323 T17863 T17883 arg2Of Cells,analysed
R14324 T17865 T17866 arg1Of transfected,with
R14325 T17865 T17872 arg1Of transfected,or
R14326 T17868 T17867 arg1Of Tat,siRNA
R14327 T17868 T17869 arg1Of Tat,","
R14328 T17869 T17866 arg2Of ",",with
R14329 T17871 T17869 arg2Of control,","
R14330 T17871 T17870 arg1Of control,siRNA
R14331 T17872 T17881 arg1Of or,and
R14332 T17873 T17872 arg2Of left,or
R14333 T17874 T17873 arg2Of untransfected,left
R14334 T17876 T17873 arg3Of modulate,left
R14335 T17876 T17875 arg1Of modulate,to
R14336 T17879 T17876 arg2Of expression,modulate
R14337 T17879 T17877 arg1Of expression,the
R14338 T17879 T17878 arg1Of expression,Tat
R14339 T17881 T17864 arg2Of and,were
R14340 T17881 T17880 arg1Of and,","
R14341 T17883 T17881 arg2Of analysed,and
R14342 T17883 T17882 arg1Of analysed,then
R14343 T17883 T17884 arg1Of analysed,for
R14344 T17886 T17884 arg2Of kinetic,for
R14345 T17886 T17885 arg1Of kinetic,the
R14346 T17886 T17887 arg1Of kinetic,of
R14347 T17889 T17887 arg2Of activation,of
R14348 T17889 T17888 arg1Of activation,NF-κB
R14349 T17889 T17890 arg1Of activation,following
R14350 T17892 T17890 arg2Of infection,following
R14351 T17892 T17891 arg1Of infection,viral
R14352 T17894 T17893 arg1Of expression,The
R14353 T17894 T17895 arg1Of expression,of
R14354 T17894 T17899 arg1Of expression,was
R14355 T17894 T17900 arg2Of expression,detected
R14356 T17896 T17897 arg1Of Tat,and
R14357 T17897 T17895 arg2Of and,of
R14358 T17898 T17897 arg2Of p24,and
R14359 T17900 T17899 arg2Of detected,was
R14360 T17900 T17901 arg1Of detected,at
R14361 T17900 T17903 arg1Of detected,to
R14362 T17900 T17906 arg1Of detected,","
R14363 T17900 T17907 arg1Of detected,while
R14364 T17902 T17901 arg2Of 3-,at
R14365 T17905 T17903 arg2Of post-infection,to
R14366 T17905 T17904 arg1Of post-infection,12-h
R14367 T17908 T17909 arg1Of it,was
R14368 T17908 T17911 arg2Of it,detected
R14369 T17911 T17907 arg2Of detected,while
R14370 T17911 T17909 arg2Of detected,was
R14371 T17911 T17910 arg1Of detected,barely
R14372 T17911 T17912 arg1Of detected,in
R14373 T17915 T17912 arg2Of cells,in
R14374 T17915 T17913 arg1Of cells,siRNA
R14375 T17915 T17914 arg1Of cells,Tat-transfected
R14376 T17915 T17916 arg1Of cells,(
R14377 T17918 T17916 arg2Of 6A,(
R14378 T17918 T17917 arg1Of 6A,Figure
R14379 T17919 T17916 arg3Of ),(
R14380 T17922 T17920 arg1Of activity,The
R14381 T17922 T17921 arg1Of activity,NF-κB
R14382 T17922 T17931 arg1Of activity,was
R14383 T17922 T17932 arg2Of activity,induced
R14384 T17922 T17955 arg1Of activity,increased
R14385 T17925 T17924 arg2Of measured,as
R14386 T17925 T17926 arg1Of measured,by
R14387 T17929 T17926 arg2Of binding,by
R14388 T17929 T17927 arg1Of binding,p65
R14389 T17929 T17928 arg1Of binding,DNA
R14390 T17932 T17931 arg2Of induced,was
R14391 T17932 T17933 arg1Of induced,at
R14392 T17932 T17936 arg1Of induced,in
R14393 T17932 T17954 arg1Of induced,and
R14394 T17935 T17933 arg2Of post-infection,at
R14395 T17935 T17934 arg1Of post-infection,3-h
R14396 T17938 T17937 arg1Of Tat-positive,both
R14397 T17938 T17939 arg1Of Tat-positive,(
R14398 T17938 T17946 arg1Of Tat-positive,and
R14399 T17941 T17942 arg1Of siRNA,and
R14400 T17942 T17939 arg2Of and,(
R14401 T17942 T17940 arg1Of and,no
R14402 T17944 T17942 arg2Of control,and
R14403 T17944 T17943 arg1Of control,siRNA
R14404 T17945 T17939 arg3Of ),(
R14405 T17946 T17936 arg2Of and,in
R14406 T17948 T17946 arg2Of cells,and
R14407 T17948 T17947 arg1Of cells,Tat-negative
R14408 T17948 T17949 arg1Of cells,(
R14409 T17951 T17949 arg2Of Tat,(
R14410 T17951 T17950 arg1Of Tat,siRNA
R14411 T17952 T17949 arg3Of ),(
R14412 T17954 T17923 arg1Of and,","
R14413 T17954 T17924 arg1Of and,as
R14414 T17954 T17930 arg1Of and,","
R14415 T17954 T17953 arg1Of and,","
R14416 T17955 T17954 arg2Of increased,and
R14417 T17955 T17956 arg1Of increased,at
R14418 T17955 T17959 arg1Of increased,in
R14419 T17957 T17956 arg2Of 12 h,at
R14420 T17959 T17958 arg1Of in,only
R14421 T17961 T17959 arg2Of cells,in
R14422 T17961 T17960 arg1Of cells,Tat-positive
R14423 T17961 T17962 arg1Of cells,(
R14424 T17964 T17962 arg2Of 6B,(
R14425 T17964 T17963 arg1Of 6B,Figure
R14426 T17965 T17962 arg3Of ),(
R14427 T17966 T17967 arg1Of Degradation,of
R14428 T17966 T17969 arg1Of Degradation,was
R14429 T17966 T17970 arg2Of Degradation,observed
R14430 T17966 T17976 arg1Of Degradation,was
R14431 T17966 T17977 arg2Of Degradation,followed
R14432 T17968 T17967 arg2Of IκB-α,of
R14433 T17970 T17969 arg2Of observed,was
R14434 T17970 T17971 arg1Of observed,at
R14435 T17970 T17975 arg1Of observed,and
R14436 T17973 T17971 arg2Of post-infection,at
R14437 T17973 T17972 arg1Of post-infection,3-h
R14438 T17975 T17974 arg1Of and,","
R14439 T17977 T17975 arg2Of followed,and
R14440 T17977 T17976 arg2Of followed,was
R14441 T17977 T17984 arg1Of followed,at
R14442 T17980 T17979 arg1Of novo,de
R14443 T17981 T17977 arg1Of synthesis,followed
R14444 T17981 T17978 arg2Of synthesis,by
R14445 T17981 T17980 arg1Of synthesis,novo
R14446 T17981 T17982 arg1Of synthesis,of
R14447 T17983 T17982 arg2Of IκB-α,of
R14448 T17985 T17984 arg2Of 12 h,at
R14449 T17985 T17986 arg1Of 12 h,independently
R14450 T17986 T17987 arg1Of independently,of
R14451 T17990 T17987 arg2Of presence,of
R14452 T17990 T17988 arg1Of presence,the
R14453 T17990 T17989 arg1Of presence,Tat
R14454 T17990 T17991 arg1Of presence,(
R14455 T17993 T17991 arg2Of 6C,(
R14456 T17993 T17992 arg1Of 6C,Figure
R14457 T17994 T17991 arg3Of ),(
R14458 T17999 T17997 arg1Of activity,the
R14459 T17999 T17998 arg1Of activity,IKK
R14460 T17999 T18000 arg1Of activity,was
R14461 T17999 T18001 arg2Of activity,induced
R14462 T17999 T18006 arg1Of activity,turned
R14463 T18001 T18000 arg2Of induced,was
R14464 T18001 T18002 arg1Of induced,at
R14465 T18001 T18005 arg1Of induced,and
R14466 T18004 T18002 arg2Of post-infection,at
R14467 T18004 T18003 arg1Of post-infection,3-h
R14468 T18005 T17995 arg1Of and,Consistently
R14469 T18005 T17996 arg1Of and,","
R14470 T18006 T18005 arg2Of turned,and
R14471 T18006 T18007 arg1Of turned,off
R14472 T18006 T18008 arg1Of turned,at
R14473 T18006 T18010 arg1Of turned,independently
R14474 T18009 T18008 arg2Of 12 h,at
R14475 T18010 T18011 arg1Of independently,of
R14476 T18014 T18011 arg2Of presence,of
R14477 T18014 T18012 arg1Of presence,the
R14478 T18014 T18013 arg1Of presence,Tat
R14479 T18014 T18015 arg1Of presence,(
R14480 T18017 T18015 arg2Of 6D,(
R14481 T18017 T18016 arg1Of 6D,Figure
R14482 T18018 T18015 arg3Of ),(
R14483 T18020 T18019 arg1Of results,These
R14484 T18020 T18021 arg1Of results,agreed
R14485 T18020 T18042 arg1Of results,supported
R14486 T18021 T18022 arg1Of agreed,with
R14487 T18021 T18040 arg1Of agreed,and
R14488 T18024 T18022 arg2Of kinetic,with
R14489 T18024 T18023 arg1Of kinetic,the
R14490 T18024 T18025 arg1Of kinetic,of
R14491 T18027 T18025 arg2Of activation,of
R14492 T18027 T18026 arg1Of activation,NF-κB
R14493 T18027 T18028 arg1Of activation,in
R14494 T18031 T18028 arg2Of infection,in
R14495 T18031 T18029 arg1Of infection,single-round
R14496 T18031 T18030 arg1Of infection,HIV-1
R14497 T18031 T18032 arg1Of infection,of
R14498 T18034 T18032 arg2Of cells,of
R14499 T18034 T18033 arg1Of cells,Jurkat
R14500 T18034 T18035 arg1Of cells,(
R14501 T18036 T18035 arg2Of Figure,(
R14502 T18036 T18037 arg1Of Figure,1
R14503 T18038 T18035 arg3Of ),(
R14504 T18040 T18039 arg1Of and,","
R14505 T18042 T18040 arg2Of supported,and
R14506 T18042 T18041 arg1Of supported,further
R14507 T18044 T18042 arg2Of requirement,supported
R14508 T18044 T18043 arg1Of requirement,the
R14509 T18044 T18045 arg1Of requirement,of
R14510 T18044 T18048 modOf requirement,to
R14511 T18047 T18045 arg2Of expression,of
R14512 T18047 T18046 arg1Of expression,viral
R14513 T18049 T18048 arg1Of counteract,to
R14514 T18049 T18053 arg1Of counteract,off
R14515 T18052 T18049 arg2Of turn,counteract
R14516 T18052 T18050 arg1Of turn,the
R14517 T18052 T18051 arg1Of turn,post-activation
R14518 T18053 T18054 arg1Of off,of
R14519 T18055 T18054 arg2Of NF-κB,of
R14520 T18059 T18056 arg2Of cells,In
R14521 T18059 T18057 arg1Of cells,HIV-1-infected
R14522 T18059 T18058 arg1Of cells,U937
R14523 T18063 T18061 arg1Of Tat,the
R14524 T18063 T18062 arg1Of Tat,endogenous
R14525 T18063 T18064 arg1Of Tat,was
R14526 T18063 T18065 arg2Of Tat,coimmunoprecipitated
R14527 T18063 T18076 arg1Of Tat,activated
R14528 T18065 T18064 arg2Of coimmunoprecipitated,was
R14529 T18065 T18066 arg1Of coimmunoprecipitated,with
R14530 T18065 T18075 arg1Of coimmunoprecipitated,and
R14531 T18067 T18068 arg1Of IκB-α,and
R14532 T18068 T18066 arg2Of and,with
R14533 T18069 T18068 arg2Of p65,and
R14534 T18069 T18070 arg1Of p65,(
R14535 T18072 T18070 arg2Of 6E,(
R14536 T18072 T18071 arg1Of 6E,Figure
R14537 T18073 T18070 arg3Of ),(
R14538 T18075 T18056 arg1Of and,In
R14539 T18075 T18060 arg1Of and,","
R14540 T18075 T18074 arg1Of and,","
R14541 T18076 T18075 arg2Of activated,and
R14542 T18076 T18080 arg1Of activated,in
R14543 T18076 T18084 arg1Of activated,","
R14544 T18076 T18085 arg1Of activated,as
R14545 T18079 T18076 arg2Of expression,activated
R14546 T18079 T18077 arg1Of expression,the
R14547 T18079 T18078 arg1Of expression,MIP-1α
R14548 T18083 T18080 arg2Of manner,in
R14549 T18083 T18081 arg1Of manner,a
R14550 T18083 T18082 arg1Of manner,p65-dependent
R14551 T18086 T18085 arg2Of shown,as
R14552 T18086 T18092 arg1Of shown,following
R14553 T18089 T18086 arg1Of lack,shown
R14554 T18089 T18087 arg2Of lack,by
R14555 T18089 T18088 arg1Of lack,the
R14556 T18089 T18090 arg1Of lack,of
R14557 T18091 T18090 arg2Of effect,of
R14558 T18094 T18093 arg1Of interference,RNA
R14559 T18094 T18095 arg1Of interference,of
R14560 T18094 T18097 arg1Of interference,or
R14561 T18096 T18095 arg2Of Tat,of
R14562 T18097 T18092 arg2Of or,following
R14563 T18098 T18097 arg2Of p65,or
R14564 T18098 T18099 arg1Of p65,(
R14565 T18101 T18099 arg2Of 6F,(
R14566 T18101 T18100 arg1Of 6F,Figure
R14567 T18102 T18099 arg3Of ),(
R14568 T18105 T18106 arg1Of Tat,and
R14569 T18106 T18108 arg1Of and,were
R14570 T18106 T18110 arg2Of and,recruited
R14571 T18107 T18106 arg2Of p65,and
R14572 T18110 T18103 arg1Of recruited,Moreover
R14573 T18110 T18104 arg1Of recruited,","
R14574 T18110 T18108 arg2Of recruited,were
R14575 T18110 T18109 arg1Of recruited,both
R14576 T18110 T18111 arg1Of recruited,to
R14577 T18110 T18117 arg1Of recruited,","
R14578 T18110 T18118 arg1Of recruited,while
R14579 T18114 T18111 arg2Of enhancer,to
R14580 T18114 T18112 arg1Of enhancer,the
R14581 T18114 T18113 arg1Of enhancer,NF-κB
R14582 T18114 T18115 arg1Of enhancer,of
R14583 T18116 T18115 arg2Of MIP-1α,of
R14584 T18121 T18119 arg1Of occupancy,the
R14585 T18121 T18120 arg1Of occupancy,p65
R14586 T18121 T18122 arg1Of occupancy,was
R14587 T18121 T18123 arg2Of occupancy,abolished
R14588 T18123 T18118 arg2Of abolished,while
R14589 T18123 T18122 arg2Of abolished,was
R14590 T18126 T18123 arg1Of Tat,abolished
R14591 T18126 T18124 arg2Of Tat,by
R14592 T18126 T18125 arg1Of Tat,siRNA
R14593 T18126 T18127 arg1Of Tat,(
R14594 T18129 T18128 arg1Of 6G,Figure
R14595 T18129 T18130 arg1Of 6G,and
R14596 T18130 T18127 arg2Of and,(
R14597 T18131 T18130 arg2Of H,and
R14598 T18132 T18127 arg3Of ),(
R14599 T18135 T18134 arg1Of results,these
R14600 T18135 T18136 arg1Of results,indicated
R14601 T18136 T18133 arg1Of indicated,Altogether
R14602 T18142 T18138 arg2Of infection,in
R14603 T18142 T18139 arg1Of infection,single
R14604 T18142 T18140 arg1Of infection,round
R14605 T18142 T18141 arg1Of infection,HIV-1
R14606 T18143 T18144 arg1Of Tat,associated
R14607 T18143 T18151 arg1Of Tat,induced
R14608 T18144 T18145 arg1Of associated,with
R14609 T18144 T18150 arg1Of associated,and
R14610 T18146 T18147 arg1Of IκB-α,and
R14611 T18147 T18145 arg2Of and,with
R14612 T18148 T18147 arg2Of p65,and
R14613 T18150 T18136 arg2Of and,indicated
R14614 T18150 T18137 arg1Of and,that
R14615 T18150 T18138 arg1Of and,in
R14616 T18150 T18149 arg1Of and,","
R14617 T18151 T18150 arg2Of induced,and
R14618 T18151 T18158 arg1Of induced,through
R14619 T18154 T18151 arg2Of activation,induced
R14620 T18154 T18152 arg1Of activation,the
R14621 T18154 T18153 arg1Of activation,p65-dependent
R14622 T18154 T18155 arg1Of activation,of
R14623 T18157 T18155 arg2Of expression,of
R14624 T18157 T18156 arg1Of expression,MIP-1α
R14625 T18159 T18160 arg1Of occupancy,of
R14626 T18159 T18164 arg1Of occupancy,and
R14627 T18163 T18160 arg2Of promoter,of
R14628 T18163 T18161 arg1Of promoter,the
R14629 T18163 T18162 arg1Of promoter,MIP-1α
R14630 T18164 T18158 arg2Of and,through
R14631 T18166 T18164 arg2Of recruitment,and
R14632 T18166 T18165 arg2Of recruitment,increased
R14633 T18166 T18167 arg1Of recruitment,of
R14634 T18168 T18167 arg2Of p65,of

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T18169 704-706 Anaphor denotes it
T18170 629-639 Antecedent denotes expression
T18171 3976-3982 Anaphor denotes effect
T18172 3893-3902 Antecedent denotes activated
R14635 T18169 T18170 boundBy it,expression
R14636 T18171 T18172 boundBy effect,activated

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T18292 0-2 IN denotes In
T18293 3-17 JJ denotes HIV-1-infected
T18294 18-27 NNS denotes monocytes
T18295 28-31 NNP denotes Tat
T18296 32-40 VBZ denotes sustains
T18297 41-44 DT denotes the
T18298 45-50 JJ denotes NF-κB
T18299 51-59 NN denotes activity
T18300 60-63 CC denotes and
T18301 64-72 VBZ denotes promotes
T18302 73-76 DT denotes the
T18303 77-92 JJ denotes transcriptional
T18304 93-103 NN denotes activation
T18305 104-106 IN denotes of
T18306 107-113 NN denotes MIP-1α
T18307 114-116 IN denotes by
T18308 117-128 VBG denotes interacting
T18309 129-133 IN denotes with
T18310 134-139 NNP denotes IκB-α
T18311 140-143 CC denotes and
T18312 144-147 CD denotes p65
T18313 148-150 PRP denotes We
T18314 151-155 JJ denotes next
T18315 156-164 JJ denotes analysed
T18316 165-172 IN denotes whether
T18317 173-176 NNP denotes Tat
T18318 177-185 VBD denotes affected
T18319 186-189 DT denotes the
T18320 190-195 JJ denotes NF-κB
T18321 196-204 NN denotes activity
T18322 205-208 CC denotes and
T18323 209-212 DT denotes the
T18324 213-223 NN denotes expression
T18325 224-226 IN denotes of
T18326 227-233 NN denotes MIP-1α
T18327 234-236 IN denotes in
T18328 237-240 DT denotes the
T18329 241-247 NN denotes course
T18330 248-250 IN denotes of
T18331 251-256 JJ denotes HIV-1
T18332 257-266 NN denotes infection
T18333 266-267 . denotes .
T18334 268-270 TO denotes To
T18335 271-277 VB denotes detect
T18336 278-281 DT denotes the
T18337 282-285 NNP denotes Tat
T18338 286-293 NN denotes protein
T18339 293-294 , denotes ,
T18340 295-297 PRP denotes we
T18341 298-306 VBD denotes produced
T18342 307-311 NNP denotes HXB2
T18343 312-327 NNP denotes Env-pseudotyped
T18344 328-333 NNP denotes NL4-3
T18345 333-334 . denotes .
T18346 334-342 NN denotes FLAG-Tat
T18347 342-343 . denotes .
T18348 343-344 NN denotes R
T18349 344-345 NN denotes −
T18350 345-346 NNP denotes E
T18351 346-347 CD denotes −
T18352 348-355 NNS denotes virions
T18353 355-356 , denotes ,
T18354 357-362 WDT denotes which
T18355 363-367 VBD denotes were
T18356 368-372 VBN denotes used
T18357 373-375 IN denotes in
T18358 376-388 JJ denotes single-round
T18359 389-398 NN denotes infection
T18360 399-401 IN denotes of
T18361 402-406 NNP denotes U937
T18362 406-407 , denotes ,
T18363 408-409 DT denotes a
T18364 410-415 JJ denotes human
T18365 416-425 JJ denotes monocytic
T18366 426-430 NN denotes cell
T18367 431-435 NN denotes line
T18368 435-436 . denotes .
T18369 437-442 NNS denotes Cells
T18370 443-447 VBD denotes were
T18371 448-459 VBN denotes transfected
T18372 460-464 IN denotes with
T18373 465-470 NNP denotes siRNA
T18374 471-474 NNP denotes Tat
T18375 474-475 , denotes ,
T18376 476-481 NNP denotes siRNA
T18377 482-489 NN denotes control
T18378 490-492 CC denotes or
T18379 493-497 VBD denotes left
T18380 498-511 JJ denotes untransfected
T18381 512-514 TO denotes to
T18382 515-523 VB denotes modulate
T18383 524-527 DT denotes the
T18384 528-531 NNP denotes Tat
T18385 532-542 NN denotes expression
T18386 542-543 , denotes ,
T18387 544-547 CC denotes and
T18388 548-552 RB denotes then
T18389 553-561 VBD denotes analysed
T18390 562-565 IN denotes for
T18391 566-569 DT denotes the
T18392 570-577 NN denotes kinetic
T18393 578-580 IN denotes of
T18394 581-586 JJ denotes NF-κB
T18395 587-597 NN denotes activation
T18396 598-607 VBG denotes following
T18397 608-613 JJ denotes viral
T18398 614-623 NN denotes infection
T18399 623-624 . denotes .
T18400 625-628 DT denotes The
T18401 629-639 NN denotes expression
T18402 640-642 IN denotes of
T18403 643-646 NNP denotes Tat
T18404 647-650 CC denotes and
T18405 651-654 CD denotes p24
T18406 655-658 VBD denotes was
T18407 659-667 VBN denotes detected
T18408 668-670 IN denotes at
T18409 671-672 LS denotes 3
T18410 672-673 : denotes -
T18411 674-676 TO denotes to
T18412 677-681 JJ denotes 12-h
T18413 682-696 NN denotes post-infection
T18414 696-697 , denotes ,
T18415 698-703 IN denotes while
T18416 704-706 PRP denotes it
T18417 707-710 VBD denotes was
T18418 711-717 RB denotes barely
T18419 718-726 VBN denotes detected
T18420 727-729 IN denotes in
T18421 730-735 NNP denotes siRNA
T18422 736-751 VBD denotes Tat-transfected
T18423 752-757 NNS denotes cells
T18424 758-759 -LRB- denotes (
T18425 759-765 NN denotes Figure
T18426 766-768 NN denotes 6A
T18427 768-769 -RRB- denotes )
T18428 769-770 . denotes .
T18429 3026-3029 DT denotes The
T18430 3030-3035 JJ denotes NF-κB
T18431 3036-3044 NN denotes activity
T18432 3044-3045 , denotes ,
T18433 3046-3048 IN denotes as
T18434 3049-3057 VBN denotes measured
T18435 3058-3060 IN denotes by
T18436 3061-3064 CD denotes p65
T18437 3065-3068 NNP denotes DNA
T18438 3069-3076 JJ denotes binding
T18439 3076-3077 , denotes ,
T18440 3078-3081 VBD denotes was
T18441 3082-3089 VBN denotes induced
T18442 3090-3092 IN denotes at
T18443 3093-3096 JJ denotes 3-h
T18444 3097-3111 NN denotes post-infection
T18445 3112-3114 IN denotes in
T18446 3115-3119 DT denotes both
T18447 3120-3132 JJ denotes Tat-positive
T18448 3133-3134 -LRB- denotes (
T18449 3134-3136 DT denotes no
T18450 3137-3142 NN denotes siRNA
T18451 3143-3146 CC denotes and
T18452 3147-3152 NN denotes siRNA
T18453 3153-3160 NN denotes control
T18454 3160-3161 -RRB- denotes )
T18455 3162-3165 CC denotes and
T18456 3166-3178 JJ denotes Tat-negative
T18457 3179-3184 NNS denotes cells
T18458 3185-3186 -LRB- denotes (
T18459 3186-3191 NNP denotes siRNA
T18460 3192-3195 NNP denotes Tat
T18461 3195-3196 -RRB- denotes )
T18462 3196-3197 , denotes ,
T18463 3198-3201 CC denotes and
T18464 3202-3211 VBD denotes increased
T18465 3212-3214 IN denotes at
T18466 3215-3217 CD denotes 12
T18467 3218-3219 NN denotes h
T18468 3220-3224 RB denotes only
T18469 3225-3227 IN denotes in
T18470 3228-3240 JJ denotes Tat-positive
T18471 3241-3246 NNS denotes cells
T18472 3247-3248 -LRB- denotes (
T18473 3248-3254 NN denotes Figure
T18474 3255-3257 NN denotes 6B
T18475 3257-3258 -RRB- denotes )
T18476 3258-3259 . denotes .
T18477 3260-3271 NN denotes Degradation
T18478 3272-3274 IN denotes of
T18479 3275-3280 NNP denotes IκB-α
T18480 3281-3284 VBD denotes was
T18481 3285-3293 VBN denotes observed
T18482 3294-3296 IN denotes at
T18483 3297-3300 JJ denotes 3-h
T18484 3301-3315 NN denotes post-infection
T18485 3315-3316 , denotes ,
T18486 3317-3320 CC denotes and
T18487 3321-3324 VBD denotes was
T18488 3325-3333 VBN denotes followed
T18489 3334-3336 IN denotes by
T18490 3337-3339 FW denotes de
T18491 3340-3344 FW denotes novo
T18492 3345-3354 NN denotes synthesis
T18493 3355-3357 IN denotes of
T18494 3358-3363 NNP denotes IκB-α
T18495 3364-3366 IN denotes at
T18496 3367-3369 CD denotes 12
T18497 3370-3371 NN denotes h
T18498 3372-3385 RB denotes independently
T18499 3386-3388 IN denotes of
T18500 3389-3392 DT denotes the
T18501 3393-3396 NNP denotes Tat
T18502 3397-3405 NN denotes presence
T18503 3406-3407 -LRB- denotes (
T18504 3407-3413 NN denotes Figure
T18505 3414-3416 NN denotes 6C
T18506 3416-3417 -RRB- denotes )
T18507 3417-3418 . denotes .
T18508 3419-3431 RB denotes Consistently
T18509 3431-3432 , denotes ,
T18510 3433-3436 DT denotes the
T18511 3437-3440 NNP denotes IKK
T18512 3441-3449 NN denotes activity
T18513 3450-3453 VBD denotes was
T18514 3454-3461 VBN denotes induced
T18515 3462-3464 IN denotes at
T18516 3465-3468 JJ denotes 3-h
T18517 3469-3483 NN denotes post-infection
T18518 3484-3487 CC denotes and
T18519 3488-3494 VBD denotes turned
T18520 3495-3498 RP denotes off
T18521 3499-3501 IN denotes at
T18522 3502-3504 CD denotes 12
T18523 3505-3506 NN denotes h
T18524 3507-3520 RB denotes independently
T18525 3521-3523 IN denotes of
T18526 3524-3527 DT denotes the
T18527 3528-3531 NNP denotes Tat
T18528 3532-3540 NN denotes presence
T18529 3541-3542 -LRB- denotes (
T18530 3542-3548 NN denotes Figure
T18531 3549-3551 CD denotes 6D
T18532 3551-3552 -RRB- denotes )
T18533 3552-3553 . denotes .
T18534 3554-3559 DT denotes These
T18535 3560-3567 NNS denotes results
T18536 3568-3574 VBD denotes agreed
T18537 3575-3579 IN denotes with
T18538 3580-3583 DT denotes the
T18539 3584-3591 NN denotes kinetic
T18540 3592-3594 IN denotes of
T18541 3595-3600 JJ denotes NF-κB
T18542 3601-3611 NN denotes activation
T18543 3612-3614 IN denotes in
T18544 3615-3627 JJ denotes single-round
T18545 3628-3633 JJ denotes HIV-1
T18546 3634-3643 NN denotes infection
T18547 3644-3646 IN denotes of
T18548 3647-3653 NNP denotes Jurkat
T18549 3654-3659 NNS denotes cells
T18550 3660-3661 -LRB- denotes (
T18551 3661-3667 NN denotes Figure
T18552 3668-3669 CD denotes 1
T18553 3669-3670 -RRB- denotes )
T18554 3670-3671 , denotes ,
T18555 3672-3675 CC denotes and
T18556 3676-3683 JJ denotes further
T18557 3684-3693 VBD denotes supported
T18558 3694-3697 DT denotes the
T18559 3698-3709 NN denotes requirement
T18560 3710-3712 IN denotes of
T18561 3713-3718 JJ denotes viral
T18562 3719-3729 NN denotes expression
T18563 3730-3732 TO denotes to
T18564 3733-3743 VB denotes counteract
T18565 3744-3747 DT denotes the
T18566 3748-3763 NN denotes post-activation
T18567 3764-3768 VB denotes turn
T18568 3769-3772 RB denotes off
T18569 3773-3775 IN denotes of
T18570 3776-3781 NN denotes NF-κB
T18571 3781-3782 . denotes .
T18572 3783-3785 IN denotes In
T18573 3786-3800 JJ denotes HIV-1-infected
T18574 3801-3805 NNP denotes U937
T18575 3806-3811 NNS denotes cells
T18576 3811-3812 , denotes ,
T18577 3813-3816 DT denotes the
T18578 3817-3827 JJ denotes endogenous
T18579 3828-3831 NNP denotes Tat
T18580 3832-3835 VBD denotes was
T18581 3836-3856 VBN denotes coimmunoprecipitated
T18582 3857-3861 IN denotes with
T18583 3862-3867 NNP denotes IκB-α
T18584 3868-3871 CC denotes and
T18585 3872-3875 NNS denotes p65
T18586 3876-3877 -LRB- denotes (
T18587 3877-3883 NN denotes Figure
T18588 3884-3886 CD denotes 6E
T18589 3886-3887 -RRB- denotes )
T18590 3887-3888 , denotes ,
T18591 3889-3892 CC denotes and
T18592 3893-3902 VBD denotes activated
T18593 3903-3906 DT denotes the
T18594 3907-3913 JJ denotes MIP-1α
T18595 3914-3924 NN denotes expression
T18596 3925-3927 IN denotes in
T18597 3928-3929 DT denotes a
T18598 3930-3943 JJ denotes p65-dependent
T18599 3944-3950 NN denotes manner
T18600 3950-3951 , denotes ,
T18601 3952-3954 IN denotes as
T18602 3955-3960 VBN denotes shown
T18603 3961-3963 IN denotes by
T18604 3964-3967 DT denotes the
T18605 3968-3972 NN denotes lack
T18606 3973-3975 IN denotes of
T18607 3976-3982 NN denotes effect
T18608 3983-3992 VBG denotes following
T18609 3993-3996 NNP denotes RNA
T18610 3997-4009 NN denotes interference
T18611 4010-4012 IN denotes of
T18612 4013-4016 NNP denotes Tat
T18613 4017-4019 CC denotes or
T18614 4020-4023 CD denotes p65
T18615 4024-4025 -LRB- denotes (
T18616 4025-4031 NN denotes Figure
T18617 4032-4034 CD denotes 6F
T18618 4034-4035 -RRB- denotes )
T18619 4035-4036 . denotes .
T18620 4037-4045 RB denotes Moreover
T18621 4045-4046 , denotes ,
T18622 4047-4050 NNP denotes Tat
T18623 4051-4054 CC denotes and
T18624 4055-4058 NNS denotes p65
T18625 4059-4063 VBD denotes were
T18626 4064-4068 DT denotes both
T18627 4069-4078 VBN denotes recruited
T18628 4079-4081 TO denotes to
T18629 4082-4085 DT denotes the
T18630 4086-4091 JJ denotes NF-κB
T18631 4092-4100 NN denotes enhancer
T18632 4101-4103 IN denotes of
T18633 4104-4110 NNP denotes MIP-1α
T18634 4110-4111 , denotes ,
T18635 4112-4117 IN denotes while
T18636 4118-4121 DT denotes the
T18637 4122-4125 CD denotes p65
T18638 4126-4135 NN denotes occupancy
T18639 4136-4139 VBD denotes was
T18640 4140-4149 VBN denotes abolished
T18641 4150-4152 IN denotes by
T18642 4153-4158 NNP denotes siRNA
T18643 4159-4162 NNP denotes Tat
T18644 4163-4164 -LRB- denotes (
T18645 4164-4170 NNP denotes Figure
T18646 4171-4173 NNP denotes 6G
T18647 4174-4177 CC denotes and
T18648 4178-4179 NNP denotes H
T18649 4179-4180 -RRB- denotes )
T18650 4180-4181 . denotes .
T18651 4182-4192 RB denotes Altogether
T18652 4193-4198 DT denotes these
T18653 4199-4206 NNS denotes results
T18654 4207-4216 VBD denotes indicated
T18655 4217-4221 IN denotes that
T18656 4222-4224 IN denotes in
T18657 4225-4231 JJ denotes single
T18658 4232-4237 NN denotes round
T18659 4238-4243 NN denotes HIV-1
T18660 4244-4253 NN denotes infection
T18661 4254-4257 NNP denotes Tat
T18662 4258-4268 VBN denotes associated
T18663 4269-4273 IN denotes with
T18664 4274-4279 NNP denotes IκB-α
T18665 4280-4283 CC denotes and
T18666 4284-4287 CD denotes p65
T18667 4287-4288 , denotes ,
T18668 4289-4292 CC denotes and
T18669 4293-4300 VBD denotes induced
T18670 4301-4304 DT denotes the
T18671 4305-4318 JJ denotes p65-dependent
T18672 4319-4329 NN denotes activation
T18673 4330-4332 IN denotes of
T18674 4333-4339 JJ denotes MIP-1α
T18675 4340-4350 NN denotes expression
T18676 4351-4358 IN denotes through
T18677 4359-4368 NN denotes occupancy
T18678 4369-4371 IN denotes of
T18679 4372-4375 DT denotes the
T18680 4376-4382 JJ denotes MIP-1α
T18681 4383-4391 NN denotes promoter
T18682 4392-4395 CC denotes and
T18683 4396-4405 VBD denotes increased
T18684 4406-4417 NN denotes recruitment
T18685 4418-4420 IN denotes of
T18686 4421-4424 NNS denotes p65
T18687 4424-4425 . denotes .
T28367 781-783 IN denotes In
T28368 784-789 JJ denotes HIV-1
T28369 790-799 NN denotes infection
T28370 800-803 NNP denotes Tat
T28371 804-812 VBZ denotes sustains
T28372 813-816 DT denotes the
T28373 817-822 JJ denotes NF-κB
T28374 823-831 NN denotes activity
T28375 832-835 CC denotes and
T28376 836-844 VBZ denotes enhances
T28377 845-848 DT denotes the
T28378 849-855 JJ denotes MIP-1α
T28379 856-866 NN denotes expression
T28380 867-870 IN denotes via
T28381 871-882 NN denotes interaction
T28382 883-887 IN denotes with
T28383 888-893 NNP denotes IκB-α
T28384 894-897 CC denotes and
T28385 898-901 NNS denotes p65
T28386 901-902 . denotes .
T28387 903-907 CD denotes U937
T28388 908-913 NNS denotes cells
T28389 914-915 -LRB- denotes (
T28390 915-916 CD denotes 5
T28391 917-918 RB denotes ×
T28392 919-922 CD denotes 107
T28393 922-923 -RRB- denotes )
T28394 924-928 VBD denotes were
T28395 929-940 VBN denotes transfected
T28396 941-945 IN denotes with
T28397 946-951 NNP denotes siRNA
T28398 952-955 NNP denotes Tat
T28399 955-956 , denotes ,
T28400 957-962 NNP denotes siRNA
T28401 963-970 NN denotes control
T28402 971-972 -LRB- denotes (
T28403 972-973 CD denotes 2
T28404 974-978 NN denotes nmol
T28405 978-979 -RRB- denotes )
T28406 979-980 , denotes ,
T28407 981-983 CC denotes or
T28408 984-988 VBD denotes left
T28409 989-1002 JJ denotes untransfected
T28410 1002-1003 : denotes ;
T28411 1004-1006 CD denotes 24
T28412 1007-1008 NN denotes h
T28413 1009-1014 RB denotes later
T28414 1015-1020 NNS denotes cells
T28415 1021-1025 VBD denotes were
T28416 1026-1034 VBN denotes infected
T28417 1035-1039 IN denotes with
T28418 1040-1056 JJ denotes HXB2-pseudotyped
T28419 1057-1062 NN denotes NL4-3
T28420 1062-1063 . denotes .
T28421 1063-1071 NN denotes FLAG-Tat
T28422 1071-1072 . denotes .
T28423 1072-1073 NN denotes R
T28424 1073-1074 NN denotes −
T28425 1074-1075 NNP denotes E
T28426 1075-1076 CD denotes −
T28427 1077-1084 NNS denotes virions
T28428 1085-1086 -LRB- denotes (
T28429 1086-1089 CD denotes 500
T28430 1090-1092 NN denotes ng
T28431 1093-1095 IN denotes of
T28432 1096-1099 CD denotes p24
T28433 1099-1100 -RRB- denotes )
T28434 1101-1104 CC denotes and
T28435 1105-1114 VBD denotes harvested
T28436 1115-1117 IN denotes at
T28437 1118-1121 DT denotes the
T28438 1122-1131 JJ denotes indicated
T28439 1132-1136 NN denotes time
T28440 1136-1137 . denotes .
T28441 1138-1139 -LRB- denotes (
T28442 1139-1140 NNP denotes A
T28443 1140-1141 -RRB- denotes )
T28444 1142-1151 JJ denotes Real-time
T28445 1152-1155 NNP denotes PCR
T28446 1156-1158 IN denotes of
T28447 1159-1164 JJ denotes total
T28448 1165-1168 NNP denotes RNA
T28449 1169-1177 VBD denotes measured
T28450 1178-1181 DT denotes the
T28451 1182-1185 NNP denotes Tat
T28452 1186-1196 NN denotes expression
T28453 1196-1197 : denotes ;
T28454 1198-1203 NNP denotes ELISA
T28455 1204-1212 VBD denotes measured
T28456 1213-1216 DT denotes the
T28457 1217-1223 NN denotes amount
T28458 1224-1226 IN denotes of
T28459 1227-1230 CD denotes p24
T28460 1231-1233 IN denotes in
T28461 1234-1239 JJ denotes whole
T28462 1240-1244 NN denotes cell
T28463 1245-1253 NNS denotes extracts
T28464 1253-1254 . denotes .
T28465 1255-1256 -LRB- denotes (
T28466 1256-1257 NNP denotes B
T28467 1257-1258 -RRB- denotes )
T28468 1259-1262 DT denotes The
T28469 1263-1270 JJ denotes binding
T28470 1271-1273 IN denotes of
T28471 1274-1277 CD denotes p65
T28472 1278-1280 TO denotes to
T28473 1281-1284 DT denotes the
T28474 1285-1290 NNP denotes NF-κB
T28475 1291-1306 JJ denotes double-stranded
T28476 1307-1322 NN denotes oligonucleotide
T28477 1323-1326 VBD denotes was
T28478 1327-1335 VBN denotes measured
T28479 1336-1338 IN denotes in
T28480 1339-1346 JJ denotes nuclear
T28481 1347-1355 NNS denotes extracts
T28482 1356-1357 -LRB- denotes (
T28483 1357-1359 CD denotes 10
T28484 1360-1362 NN denotes µg
T28485 1362-1363 -RRB- denotes )
T28486 1364-1369 VBG denotes using
T28487 1370-1373 DT denotes the
T28488 1374-1379 NNP denotes NF-κB
T28489 1380-1393 NNP denotes Transcription
T28490 1394-1400 NNP denotes Factor
T28491 1401-1406 NNP denotes ELISA
T28492 1407-1412 NN denotes assay
T28493 1413-1416 NN denotes kit
T28494 1417-1418 -LRB- denotes (
T28495 1418-1424 NNP denotes Cayman
T28496 1424-1425 -RRB- denotes )
T28497 1425-1426 . denotes .
T28498 1427-1428 -LRB- denotes (
T28499 1428-1429 $ denotes C
T28500 1429-1430 -RRB- denotes )
T28501 1431-1434 DT denotes The
T28502 1435-1440 JJ denotes IκB-α
T28503 1441-1448 NN denotes content
T28504 1449-1452 VBD denotes was
T28505 1453-1461 VBN denotes analysed
T28506 1462-1464 IN denotes by
T28507 1465-1467 CD denotes 12
T28508 1467-1468 NN denotes %
T28509 1469-1472 NNP denotes SDS
T28510 1473-1477 NNP denotes PAGE
T28511 1478-1481 CC denotes and
T28512 1482-1489 JJ denotes western
T28513 1490-1498 VBG denotes blotting
T28514 1499-1501 IN denotes of
T28515 1502-1511 JJ denotes cytosolic
T28516 1512-1520 NNS denotes extracts
T28517 1521-1522 -LRB- denotes (
T28518 1522-1524 CD denotes 20
T28519 1525-1527 NN denotes µg
T28520 1527-1528 -RRB- denotes )
T28521 1529-1534 VBG denotes using
T28522 1535-1545 JJ denotes anti-IκB-α
T28523 1546-1554 NN denotes antibody
T28524 1554-1555 . denotes .
T28525 1556-1568 NNP denotes Densitometry
T28526 1569-1575 NNS denotes values
T28527 1576-1577 -LRB- denotes (
T28528 1577-1578 NNP denotes D
T28529 1578-1579 -RRB- denotes )
T28530 1580-1582 IN denotes of
T28531 1583-1586 DT denotes the
T28532 1587-1592 NNS denotes bands
T28533 1593-1597 VBD denotes were
T28534 1598-1607 VBN denotes expressed
T28535 1608-1610 IN denotes as
T28536 1611-1615 VBP denotes fold
T28537 1616-1624 NN denotes increase
T28538 1625-1630 IN denotes above
T28539 1631-1634 DT denotes the
T28540 1635-1642 NN denotes control
T28541 1643-1644 -LRB- denotes (
T28542 1644-1648 JJ denotes mock
T28543 1648-1649 -RRB- denotes )
T28544 1649-1650 . denotes .
T28545 1651-1652 -LRB- denotes (
T28546 1652-1653 NNP denotes D
T28547 1653-1654 -RRB- denotes )
T28548 1655-1658 NNP denotes IKK
T28549 1659-1667 NN denotes activity
T28550 1668-1671 VBD denotes was
T28551 1672-1680 VBN denotes measured
T28552 1681-1683 IN denotes in
T28553 1684-1693 JJ denotes cytosolic
T28554 1694-1698 NN denotes cell
T28555 1699-1707 NNS denotes extracts
T28556 1708-1709 -LRB- denotes (
T28557 1709-1712 CD denotes 100
T28558 1713-1715 NN denotes µg
T28559 1715-1716 -RRB- denotes )
T28560 1717-1722 VBG denotes using
T28561 1723-1729 NNP denotes HTScan
T28562 1730-1733 NNP denotes IKK
T28563 1734-1740 NNP denotes Kinase
T28564 1741-1746 NNP denotes Assay
T28565 1747-1748 -LRB- denotes (
T28566 1748-1752 NNP denotes Cell
T28567 1753-1762 NNP denotes Signaling
T28568 1763-1773 NNP denotes Technology
T28569 1773-1774 -RRB- denotes )
T28570 1774-1775 . denotes .
T28571 1776-1777 -LRB- denotes (
T28572 1777-1778 NNP denotes E
T28573 1778-1779 -RRB- denotes )
T28574 1780-1784 NNP denotes U937
T28575 1785-1790 NNS denotes cells
T28576 1791-1792 -LRB- denotes (
T28577 1792-1793 CD denotes 5
T28578 1794-1795 RB denotes ×
T28579 1796-1799 CD denotes 107
T28580 1799-1800 -RRB- denotes )
T28581 1801-1805 VBD denotes were
T28582 1806-1814 VBN denotes infected
T28583 1815-1819 IN denotes with
T28584 1820-1836 JJ denotes HXB2-pseudotyped
T28585 1837-1842 NN denotes NL4-3
T28586 1842-1843 . denotes .
T28587 1843-1851 NN denotes FLAG-Tat
T28588 1851-1852 . denotes .
T28589 1852-1853 NN denotes R
T28590 1853-1854 NN denotes −
T28591 1854-1855 NNP denotes E
T28592 1855-1856 CD denotes −
T28593 1857-1864 NNS denotes virions
T28594 1864-1865 , denotes ,
T28595 1866-1868 CC denotes or
T28596 1869-1873 VBD denotes left
T28597 1874-1884 JJ denotes uninfected
T28598 1884-1885 . denotes .
T28599 1886-1902 CD denotes Twenty-four-hour
T28600 1903-1917 NN denotes post-infection
T28601 1917-1918 , denotes ,
T28602 1919-1923 NN denotes cell
T28603 1924-1932 NNS denotes extracts
T28604 1933-1934 -LRB- denotes (
T28605 1934-1935 CD denotes 1
T28606 1936-1938 NN denotes mg
T28607 1938-1939 -RRB- denotes )
T28608 1940-1944 VBD denotes were
T28609 1945-1963 VBN denotes immunoprecipitated
T28610 1964-1968 IN denotes with
T28611 1969-1976 NN denotes protein
T28612 1977-1996 JJ denotes G-Sepharose-coupled
T28613 1997-2006 JJ denotes anti-FLAG
T28614 2007-2015 NN denotes antibody
T28615 2015-2016 . denotes .
T28616 2017-2032 NNS denotes Immunocomplexes
T28617 2033-2037 VBD denotes were
T28618 2038-2047 VBN denotes separated
T28619 2048-2050 IN denotes by
T28620 2051-2053 CD denotes 12
T28621 2053-2054 NN denotes %
T28622 2055-2058 NNP denotes SDS
T28623 2059-2063 NNP denotes PAGE
T28624 2064-2067 CC denotes and
T28625 2068-2076 VBN denotes analysed
T28626 2077-2079 IN denotes by
T28627 2080-2087 JJ denotes western
T28628 2088-2096 VBG denotes blotting
T28629 2097-2101 IN denotes with
T28630 2102-2110 JJ denotes anti-p65
T28631 2110-2111 , denotes ,
T28632 2112-2121 JJ denotes anti-FLAG
T28633 2122-2125 CC denotes and
T28634 2126-2136 JJ denotes anti-IκB-α
T28635 2137-2147 NNS denotes antibodies
T28636 2147-2148 . denotes .
T28637 2149-2150 -LRB- denotes (
T28638 2150-2151 NN denotes F
T28639 2151-2152 -RRB- denotes )
T28640 2153-2157 NNP denotes U937
T28641 2158-2163 NNS denotes cells
T28642 2164-2165 -LRB- denotes (
T28643 2165-2166 CD denotes 5
T28644 2167-2168 RB denotes ×
T28645 2169-2172 CD denotes 107
T28646 2172-2173 -RRB- denotes )
T28647 2174-2178 VBD denotes were
T28648 2179-2190 VBN denotes transfected
T28649 2191-2195 IN denotes with
T28650 2196-2201 NNP denotes siRNA
T28651 2202-2205 NNP denotes Tat
T28652 2205-2206 , denotes ,
T28653 2207-2212 NNP denotes siRNA
T28654 2213-2216 CD denotes p65
T28655 2216-2217 , denotes ,
T28656 2218-2223 NNP denotes siRNA
T28657 2224-2231 NN denotes control
T28658 2232-2233 -LRB- denotes (
T28659 2233-2234 CD denotes 2
T28660 2235-2239 NN denotes nmol
T28661 2239-2240 -RRB- denotes )
T28662 2240-2241 , denotes ,
T28663 2242-2244 CC denotes or
T28664 2245-2249 VBD denotes left
T28665 2250-2263 JJ denotes untransfected
T28666 2263-2264 : denotes ;
T28667 2265-2267 CD denotes 24
T28668 2268-2269 NN denotes h
T28669 2270-2275 RB denotes later
T28670 2275-2276 , denotes ,
T28671 2277-2282 NNS denotes cells
T28672 2283-2287 VBD denotes were
T28673 2288-2296 VBN denotes infected
T28674 2297-2301 IN denotes with
T28675 2302-2318 JJ denotes HXB2-pseudotyped
T28676 2319-2324 NN denotes NL4-3
T28677 2324-2325 . denotes .
T28678 2325-2333 NN denotes FLAG-Tat
T28679 2333-2334 . denotes .
T28680 2334-2335 NN denotes R
T28681 2335-2336 NN denotes −
T28682 2336-2337 NNP denotes E
T28683 2337-2338 CD denotes −
T28684 2339-2346 NNS denotes virions
T28685 2346-2347 , denotes ,
T28686 2348-2350 CC denotes or
T28687 2351-2355 VBD denotes left
T28688 2356-2366 JJ denotes uninfected
T28689 2366-2367 . denotes .
T28690 2368-2384 CD denotes Twenty-four-hour
T28691 2385-2399 JJ denotes post-infection
T28692 2399-2400 , denotes ,
T28693 2401-2406 JJ denotes total
T28694 2407-2410 NNP denotes RNA
T28695 2411-2414 VBD denotes was
T28696 2415-2423 VBN denotes analysed
T28697 2424-2427 IN denotes for
T28698 2428-2434 JJ denotes MIP-1α
T28699 2435-2445 NN denotes expression
T28700 2446-2448 IN denotes by
T28701 2449-2458 JJ denotes real-time
T28702 2459-2462 NNP denotes PCR
T28703 2462-2463 . denotes .
T28704 2464-2465 -LRB- denotes (
T28705 2465-2466 NNP denotes G
T28706 2467-2470 CC denotes and
T28707 2471-2472 NNP denotes H
T28708 2472-2473 -RRB- denotes )
T28709 2474-2478 NNP denotes U937
T28710 2479-2484 NNS denotes cells
T28711 2485-2486 -LRB- denotes (
T28712 2486-2487 CD denotes 5
T28713 2488-2489 RB denotes ×
T28714 2490-2493 CD denotes 107
T28715 2493-2494 -RRB- denotes )
T28716 2495-2499 VBD denotes were
T28717 2500-2511 VBN denotes transfected
T28718 2512-2516 IN denotes with
T28719 2517-2522 NNP denotes siRNA
T28720 2523-2526 NNP denotes Tat
T28721 2527-2529 CC denotes or
T28722 2530-2535 NNP denotes siRNA
T28723 2536-2543 NN denotes control
T28724 2544-2545 -LRB- denotes (
T28725 2545-2546 CD denotes 2
T28726 2547-2551 NN denotes nmol
T28727 2551-2552 -RRB- denotes )
T28728 2552-2553 , denotes ,
T28729 2554-2556 CC denotes or
T28730 2557-2561 VBD denotes left
T28731 2562-2575 JJ denotes untransfected
T28732 2575-2576 : denotes ;
T28733 2577-2579 CD denotes 24
T28734 2580-2581 NN denotes h
T28735 2582-2587 RB denotes later
T28736 2587-2588 , denotes ,
T28737 2589-2594 NNS denotes cells
T28738 2595-2599 VBD denotes were
T28739 2600-2608 VBN denotes infected
T28740 2609-2613 IN denotes with
T28741 2614-2630 JJ denotes HXB2-pseudotyped
T28742 2631-2636 NN denotes NL4-3
T28743 2636-2637 . denotes .
T28744 2637-2645 NN denotes FLAG-Tat
T28745 2645-2646 . denotes .
T28746 2646-2647 NN denotes R
T28747 2647-2648 NN denotes −
T28748 2648-2649 NNP denotes E
T28749 2649-2650 CD denotes −
T28750 2651-2658 NNS denotes virions
T28751 2658-2659 , denotes ,
T28752 2660-2662 CC denotes or
T28753 2663-2667 VBD denotes left
T28754 2668-2678 JJ denotes uninfected
T28755 2678-2679 . denotes .
T28756 2680-2696 CD denotes Twenty-four-hour
T28757 2697-2711 NN denotes post-infection
T28758 2711-2712 , denotes ,
T28759 2713-2717 NNP denotes ChIP
T28760 2718-2721 VBD denotes was
T28761 2722-2731 VBN denotes performed
T28762 2732-2736 IN denotes with
T28763 2737-2745 JJ denotes anti-p65
T28764 2746-2747 -LRB- denotes (
T28765 2747-2748 NNP denotes G
T28766 2748-2749 -RRB- denotes )
T28767 2750-2752 CC denotes or
T28768 2753-2762 JJ denotes anti-FLAG
T28769 2763-2764 -LRB- denotes (
T28770 2764-2765 NNP denotes H
T28771 2765-2766 -RRB- denotes )
T28772 2766-2767 . denotes .
T28773 2768-2777 JJ denotes Real-time
T28774 2778-2781 NNP denotes PCR
T28775 2782-2785 VBD denotes was
T28776 2786-2795 VBN denotes performed
T28777 2796-2800 IN denotes with
T28778 2801-2808 NNS denotes primers
T28779 2809-2817 JJ denotes specific
T28780 2818-2821 IN denotes for
T28781 2822-2828 NNP denotes MIP-1α
T28782 2829-2832 CC denotes and
T28783 2833-2838 NNP denotes GAPDH
T28784 2839-2848 NNS denotes promoters
T28785 2848-2849 . denotes .
T28786 2850-2856 NNS denotes Values
T28787 2857-2858 -LRB- denotes (
T28788 2858-2862 JJ denotes mean
T28789 2863-2864 NN denotes ±
T28790 2865-2867 NNP denotes SE
T28791 2867-2868 , denotes ,
T28792 2869-2870 JJ denotes n
T28793 2871-2872 SYM denotes =
T28794 2873-2874 LS denotes 3
T28795 2874-2875 -RRB- denotes )
T28796 2876-2879 VBP denotes are
T28797 2880-2885 VBN denotes shown
T28798 2885-2886 . denotes .
T28799 2887-2890 DT denotes The
T28800 2891-2900 NNS denotes asterisks
T28801 2901-2909 VBP denotes indicate
T28802 2910-2923 RB denotes statistically
T28803 2924-2935 JJ denotes significant
T28804 2936-2947 NNS denotes differences
T28805 2948-2956 VBN denotes compared
T28806 2957-2959 TO denotes to
T28807 2960-2963 DT denotes the
T28808 2964-2971 NN denotes control
T28809 2972-2973 -LRB- denotes (
T28810 2973-2977 JJ denotes mock
T28811 2977-2978 -RRB- denotes )
T28812 2978-2979 , denotes ,
T28813 2980-2989 VBG denotes according
T28814 2990-2992 TO denotes to
T28815 2993-2996 DT denotes the
T28816 2997-3004 NN denotes Student
T28817 3004-3006 POS denotes 's
T28818 3007-3013 JJS denotes t-test
T28819 3014-3015 -LRB- denotes (
T28820 3015-3016 NNP denotes P
T28821 3017-3018 CD denotes <
T28822 3019-3023 CD denotes 0.05
T28823 3023-3024 -RRB- denotes )
T28824 3024-3025 . denotes .
R14637 T18292 T18296 prep In,sustains
R14638 T18293 T18295 amod HIV-1-infected,Tat
R14639 T18294 T18295 compound monocytes,Tat
R14640 T18295 T18292 pobj Tat,In
R14641 T18296 T18296 ROOT sustains,sustains
R14642 T18297 T18299 det the,activity
R14643 T18298 T18299 amod NF-κB,activity
R14644 T18299 T18296 dobj activity,sustains
R14645 T18300 T18296 cc and,sustains
R14646 T18301 T18296 conj promotes,sustains
R14647 T18302 T18304 det the,activation
R14648 T18303 T18304 amod transcriptional,activation
R14649 T18304 T18301 dobj activation,promotes
R14650 T18305 T18304 prep of,activation
R14651 T18306 T18305 pobj MIP-1α,of
R14652 T18307 T18301 prep by,promotes
R14653 T18308 T18307 pcomp interacting,by
R14654 T18309 T18308 prep with,interacting
R14655 T18310 T18309 pobj IκB-α,with
R14656 T18311 T18301 cc and,promotes
R14657 T18312 T18301 conj p65,promotes
R14658 T18313 T18315 nsubj We,analysed
R14659 T18314 T18315 advmod next,analysed
R14660 T18315 T18315 ROOT analysed,analysed
R14661 T18316 T18318 mark whether,affected
R14662 T18317 T18318 nsubj Tat,affected
R14663 T18318 T18315 ccomp affected,analysed
R14664 T18319 T18321 det the,activity
R14665 T18320 T18321 amod NF-κB,activity
R14666 T18321 T18318 dobj activity,affected
R14667 T18322 T18321 cc and,activity
R14668 T18323 T18324 det the,expression
R14669 T18324 T18321 conj expression,activity
R14670 T18325 T18324 prep of,expression
R14671 T18326 T18325 pobj MIP-1α,of
R14672 T18327 T18318 prep in,affected
R14673 T18328 T18329 det the,course
R14674 T18329 T18327 pobj course,in
R14675 T18330 T18329 prep of,course
R14676 T18331 T18332 compound HIV-1,infection
R14677 T18332 T18330 pobj infection,of
R14678 T18333 T18315 punct .,analysed
R14679 T18334 T18335 aux To,detect
R14680 T18335 T18341 advcl detect,produced
R14681 T18336 T18338 det the,protein
R14682 T18337 T18338 compound Tat,protein
R14683 T18338 T18335 dobj protein,detect
R14684 T18339 T18341 punct ",",produced
R14685 T18340 T18341 nsubj we,produced
R14686 T18341 T18341 ROOT produced,produced
R14687 T18342 T18344 compound HXB2,NL4-3
R14688 T18343 T18344 compound Env-pseudotyped,NL4-3
R14689 T18344 T18341 dobj NL4-3,produced
R14690 T18345 T18341 punct .,produced
R14691 T18346 T18346 ROOT FLAG-Tat,FLAG-Tat
R14692 T18347 T18346 punct .,FLAG-Tat
R14693 T18348 T18349 compound R,−
R14694 T18349 T18349 ROOT −,−
R14734 T18389 T18379 conj analysed,left
R14735 T18390 T18389 prep for,analysed
R14736 T18391 T18392 det the,kinetic
R14737 T18392 T18390 pobj kinetic,for
R14738 T18393 T18392 prep of,kinetic
R14739 T18394 T18395 amod NF-κB,activation
R14740 T18395 T18393 pobj activation,of
R14741 T18396 T18392 prep following,kinetic
R14742 T18397 T18398 amod viral,infection
R14743 T18398 T18396 pobj infection,following
R14744 T18399 T18379 punct .,left
R14745 T18400 T18401 det The,expression
R14746 T18401 T18407 nsubjpass expression,detected
R14747 T18402 T18401 prep of,expression
R14748 T18403 T18402 pobj Tat,of
R14749 T18404 T18401 cc and,expression
R14750 T18405 T18407 nsubjpass p24,detected
R14751 T18406 T18407 auxpass was,detected
R14752 T18407 T18407 ROOT detected,detected
R14753 T18408 T18407 prep at,detected
R14754 T18409 T18408 pobj 3,at
R14755 T18410 T18412 punct -,12-h
R14756 T18411 T18412 aux to,12-h
R14757 T18412 T18409 dep 12-h,3
R14758 T18413 T18412 prep post-infection,12-h
R14759 T18414 T18407 punct ",",detected
R14760 T18415 T18419 mark while,detected
R14761 T18416 T18419 nsubjpass it,detected
R14762 T18417 T18419 auxpass was,detected
R14763 T18418 T18419 advmod barely,detected
R14764 T18419 T18407 advcl detected,detected
R14765 T18420 T18419 prep in,detected
R14766 T18421 T18420 pobj siRNA,in
R14767 T18422 T18423 compound Tat-transfected,cells
R14768 T18423 T18407 oprd cells,detected
R14769 T18424 T18426 punct (,6A
R14770 T18425 T18426 compound Figure,6A
R14771 T18426 T18423 appos 6A,cells
R14772 T18427 T18423 punct ),cells
R14773 T18428 T18407 punct .,detected
R14774 T18429 T18431 det The,activity
R14793 T18448 T18450 punct (,siRNA
R14794 T18449 T18450 det no,siRNA
R14795 T18450 T18447 appos siRNA,Tat-positive
R14796 T18451 T18450 cc and,siRNA
R14797 T18452 T18453 compound siRNA,control
R14798 T18453 T18450 conj control,siRNA
R14799 T18454 T18450 punct ),siRNA
R14800 T18455 T18447 cc and,Tat-positive
R14801 T18456 T18457 amod Tat-negative,cells
R14802 T18457 T18445 pobj cells,in
R14803 T18458 T18460 punct (,Tat
R14804 T18459 T18460 compound siRNA,Tat
R14805 T18460 T18441 npadvmod Tat,induced
R14806 T18461 T18460 punct ),Tat
R14807 T18462 T18441 punct ",",induced
R14808 T18463 T18441 cc and,induced
R14809 T18464 T18441 conj increased,induced
R14810 T18465 T18464 prep at,increased
R14811 T18466 T18467 nummod 12,h
R14812 T18467 T18465 pobj h,at
R14813 T18468 T18469 advmod only,in
R14814 T18469 T18467 prep in,h
R14815 T18470 T18471 amod Tat-positive,cells
R14816 T18471 T18469 pobj cells,in
R14817 T18472 T18474 punct (,6B
R14818 T18473 T18474 compound Figure,6B
R14819 T18474 T18467 appos 6B,h
R14820 T18475 T18474 punct ),6B
R14821 T18476 T18441 punct .,induced
R14822 T18477 T18481 nsubjpass Degradation,observed
R14823 T18478 T18477 prep of,Degradation
R14824 T18479 T18478 pobj IκB-α,of
R14825 T18480 T18481 auxpass was,observed
R14826 T18481 T18481 ROOT observed,observed
R14827 T18482 T18481 prep at,observed
R14828 T18483 T18484 amod 3-h,post-infection
R14829 T18484 T18482 pobj post-infection,at
R14830 T18485 T18481 punct ",",observed
R14831 T18486 T18481 cc and,observed
R14832 T18487 T18488 auxpass was,followed
R14833 T18488 T18481 conj followed,observed
R14834 T18489 T18488 agent by,followed
R14835 T18490 T18492 nmod de,synthesis
R14836 T18491 T18492 amod novo,synthesis
R14837 T18492 T18489 pobj synthesis,by
R14838 T18493 T18492 prep of,synthesis
R14839 T18494 T18493 pobj IκB-α,of
R14840 T18495 T18492 prep at,synthesis
R14841 T18496 T18497 nummod 12,h
R14842 T18497 T18495 pobj h,at
R14843 T18498 T18492 advmod independently,synthesis
R14844 T18499 T18498 prep of,independently
R14845 T18500 T18502 det the,presence
R14846 T18501 T18502 compound Tat,presence
R14847 T18502 T18499 pobj presence,of
R14848 T18503 T18505 punct (,6C
R14849 T18504 T18505 compound Figure,6C
R14850 T18505 T18502 appos 6C,presence
R14851 T18506 T18505 punct ),6C
R14852 T18507 T18481 punct .,observed
R14853 T18508 T18514 advmod Consistently,induced
R14854 T18509 T18514 punct ",",induced
R14855 T18510 T18512 det the,activity
R14856 T18511 T18512 compound IKK,activity
R14857 T18512 T18514 nsubjpass activity,induced
R14858 T18513 T18514 auxpass was,induced
R14859 T18514 T18514 ROOT induced,induced
R14860 T18515 T18514 prep at,induced
R14861 T18516 T18517 amod 3-h,post-infection
R14862 T18517 T18515 pobj post-infection,at
R14863 T18518 T18514 cc and,induced
R14864 T18519 T18514 conj turned,induced
R14865 T18520 T18519 prt off,turned
R14866 T18521 T18519 prep at,turned
R14867 T18522 T18523 nummod 12,h
R14868 T18523 T18521 pobj h,at
R14869 T18524 T18523 advmod independently,h
R14870 T18525 T18524 prep of,independently
R14871 T18526 T18528 det the,presence
R14872 T18527 T18528 compound Tat,presence
R14873 T18528 T18525 pobj presence,of
R14874 T18529 T18530 punct (,Figure
R14875 T18530 T18528 appos Figure,presence
R14876 T18531 T18530 nummod 6D,Figure
R14877 T18532 T18530 punct ),Figure
R14878 T18533 T18514 punct .,induced
R14879 T18534 T18535 det These,results
R14880 T18535 T18536 nsubj results,agreed
R14881 T18536 T18536 ROOT agreed,agreed
R14882 T18537 T18536 prep with,agreed
R14883 T18538 T18539 det the,kinetic
R14884 T18539 T18537 pobj kinetic,with
R14885 T18540 T18539 prep of,kinetic
R14886 T18541 T18542 amod NF-κB,activation
R14887 T18542 T18540 pobj activation,of
R14888 T18543 T18542 prep in,activation
R14889 T18544 T18546 amod single-round,infection
R14890 T18545 T18546 amod HIV-1,infection
R14891 T18546 T18543 pobj infection,in
R14892 T18547 T18546 prep of,infection
R14893 T18548 T18549 compound Jurkat,cells
R14894 T18549 T18547 pobj cells,of
R14895 T18550 T18551 punct (,Figure
R14896 T18551 T18546 appos Figure,infection
R14897 T18552 T18551 nummod 1,Figure
R14898 T18553 T18551 punct ),Figure
R14899 T18554 T18551 punct ",",Figure
R14900 T18555 T18536 cc and,agreed
R14901 T18556 T18557 advmod further,supported
R14902 T18557 T18536 conj supported,agreed
R14903 T18558 T18559 det the,requirement
R14904 T18559 T18557 dobj requirement,supported
R14905 T18560 T18559 prep of,requirement
R14906 T18561 T18562 amod viral,expression
R14907 T18562 T18560 pobj expression,of
R14908 T18563 T18564 aux to,counteract
R14909 T18564 T18559 acl counteract,requirement
R14910 T18565 T18567 det the,turn
R14911 T18566 T18567 compound post-activation,turn
R14912 T18567 T18564 dobj turn,counteract
R14913 T18568 T18564 advmod off,counteract
R14914 T18569 T18568 prep of,off
R14915 T18570 T18569 pobj NF-κB,of
R14916 T18571 T18536 punct .,agreed
R14917 T18572 T18581 prep In,coimmunoprecipitated
R14918 T18573 T18575 amod HIV-1-infected,cells
R14919 T18574 T18575 compound U937,cells
R14920 T18575 T18572 pobj cells,In
R14921 T18576 T18581 punct ",",coimmunoprecipitated
R14922 T18577 T18579 det the,Tat
R14923 T18578 T18579 compound endogenous,Tat
R14924 T18579 T18581 nsubjpass Tat,coimmunoprecipitated
R14925 T18580 T18581 auxpass was,coimmunoprecipitated
R14926 T18581 T18581 ROOT coimmunoprecipitated,coimmunoprecipitated
R14927 T18582 T18581 prep with,coimmunoprecipitated
R14928 T18583 T18582 pobj IκB-α,with
R14929 T18584 T18583 cc and,IκB-α
R14930 T18585 T18583 conj p65,IκB-α
R14931 T18586 T18587 punct (,Figure
R14969 T18624 T18622 conj p65,Tat
R14970 T18625 T18627 auxpass were,recruited
R14971 T18626 T18627 dep both,recruited
R14972 T18627 T18627 ROOT recruited,recruited
R14973 T18628 T18627 prep to,recruited
R14974 T18629 T18631 det the,enhancer
R14975 T18630 T18631 amod NF-κB,enhancer
R14976 T18631 T18628 pobj enhancer,to
R14977 T18632 T18631 prep of,enhancer
R14978 T18633 T18632 pobj MIP-1α,of
R14979 T18634 T18627 punct ",",recruited
R14980 T18635 T18640 mark while,abolished
R14981 T18636 T18638 det the,occupancy
R14982 T18637 T18638 nummod p65,occupancy
R14983 T18638 T18640 nsubjpass occupancy,abolished
R14984 T18639 T18640 auxpass was,abolished
R14985 T18640 T18627 advcl abolished,recruited
R14986 T18641 T18640 agent by,abolished
R14987 T18642 T18643 compound siRNA,Tat
R14988 T18643 T18641 pobj Tat,by
R14989 T18644 T18646 punct (,6G
R14990 T18645 T18646 compound Figure,6G
R14991 T18646 T18643 appos 6G,Tat
R14992 T18647 T18646 cc and,6G
R14993 T18648 T18646 conj H,6G
R14994 T18649 T18646 punct ),6G
R14995 T18650 T18627 punct .,recruited
R14996 T18651 T18654 advmod Altogether,indicated
R14997 T18652 T18653 det these,results
R14998 T18653 T18654 nsubj results,indicated
R14999 T18654 T18654 ROOT indicated,indicated
R15000 T18655 T18662 mark that,associated
R15001 T18656 T18662 prep in,associated
R15002 T18657 T18661 amod single,Tat
R15003 T18658 T18661 compound round,Tat
R15004 T18659 T18661 compound HIV-1,Tat
R15005 T18660 T18661 compound infection,Tat
R15006 T18661 T18656 pobj Tat,in
R15007 T18662 T18654 ccomp associated,indicated
R15008 T18663 T18662 prep with,associated
R15009 T18664 T18663 pobj IκB-α,with
R22137 T28367 T28371 prep In,sustains
R22138 T28368 T28369 compound HIV-1,infection
R22139 T28369 T28367 pobj infection,In
R22140 T28370 T28371 nsubj Tat,sustains
R22141 T28371 T28371 ROOT sustains,sustains
R22142 T28372 T28374 det the,activity
R22143 T28373 T28374 amod NF-κB,activity
R22144 T28374 T28371 dobj activity,sustains
R22145 T28375 T28371 cc and,sustains
R22146 T28376 T28371 conj enhances,sustains
R22147 T28377 T28379 det the,expression
R22148 T28378 T28379 amod MIP-1α,expression
R22149 T28379 T28376 dobj expression,enhances
R22150 T28380 T28376 prep via,enhances
R22151 T28381 T28380 pobj interaction,via
R22152 T28382 T28381 prep with,interaction
R22153 T28383 T28382 pobj IκB-α,with
R22154 T28384 T28383 cc and,IκB-α
R22155 T28385 T28383 conj p65,IκB-α
R22156 T28386 T28371 punct .,sustains
R22157 T28387 T28388 nummod U937,cells
R22158 T28388 T28395 nsubjpass cells,transfected
R22159 T28389 T28388 punct (,cells
R22160 T28390 T28392 quantmod 5,107
R22161 T28391 T28392 quantmod ×,107
R22162 T28392 T28388 appos 107,cells
R22163 T28393 T28388 punct ),cells
R22164 T28394 T28395 auxpass were,transfected
R22165 T28395 T28416 ccomp transfected,infected
R22166 T28396 T28395 prep with,transfected
R22167 T28397 T28398 compound siRNA,Tat
R22168 T28398 T28396 pobj Tat,with
R22169 T28399 T28395 punct ",",transfected
R22170 T28400 T28401 compound siRNA,control
R22171 T28401 T28395 appos control,transfected
R22172 T28402 T28404 punct (,nmol
R22173 T28403 T28404 nummod 2,nmol
R22174 T28404 T28401 appos nmol,control
R22175 T28405 T28401 punct ),control
R22176 T28406 T28401 punct ",",control
R22177 T28407 T28395 cc or,transfected
R22178 T28408 T28395 conj left,transfected
R22179 T28409 T28408 oprd untransfected,left
R22180 T28410 T28416 punct ;,infected
R22181 T28411 T28412 nummod 24,h
R22182 T28412 T28416 npadvmod h,infected
R22183 T28413 T28414 amod later,cells
R22184 T28414 T28416 nsubjpass cells,infected
R22185 T28415 T28416 auxpass were,infected
R22186 T28416 T28416 ROOT infected,infected
R22187 T28417 T28416 prep with,infected
R22188 T28418 T28419 amod HXB2-pseudotyped,NL4-3
R22189 T28419 T28417 pobj NL4-3,with
R22190 T28420 T28416 punct .,infected
R22191 T28421 T28421 ROOT FLAG-Tat,FLAG-Tat
R22192 T28422 T28421 punct .,FLAG-Tat
R22193 T28423 T28423 ROOT R,R
R22194 T28424 T28435 nsubj −,harvested
R22195 T28425 T28426 compound E,−
R22196 T28426 T28427 nummod −,virions
R22197 T28427 T28424 appos virions,−
R22198 T28428 T28430 punct (,ng
R22199 T28429 T28430 nummod 500,ng
R22200 T28430 T28427 parataxis ng,virions
R22201 T28431 T28430 prep of,ng
R22202 T28432 T28431 pobj p24,of
R22203 T28433 T28430 punct ),ng
R22204 T28434 T28424 cc and,−
R22205 T28435 T28423 acl harvested,R
R22206 T28436 T28435 prep at,harvested
R22207 T28437 T28439 det the,time
R22208 T28438 T28439 amod indicated,time
R22209 T28439 T28436 pobj time,at
R22210 T28440 T28423 punct .,R
R22211 T28441 T28442 punct (,A
R22212 T28442 T28442 ROOT A,A
R22213 T28443 T28442 punct ),A
R22214 T28444 T28445 amod Real-time,PCR
R22215 T28445 T28449 nsubj PCR,measured
R22216 T28446 T28445 prep of,PCR
R22217 T28447 T28448 amod total,RNA
R22218 T28448 T28446 pobj RNA,of
R22219 T28449 T28455 ccomp measured,measured
R22220 T28450 T28452 det the,expression
R22221 T28451 T28452 compound Tat,expression
R22222 T28452 T28449 dobj expression,measured
R22223 T28453 T28455 punct ;,measured
R22224 T28454 T28455 nsubj ELISA,measured
R22225 T28455 T28455 ROOT measured,measured
R22226 T28456 T28457 det the,amount
R22227 T28457 T28455 dobj amount,measured
R22228 T28458 T28457 prep of,amount
R22229 T28459 T28458 pobj p24,of
R22230 T28460 T28459 prep in,p24
R22231 T28461 T28463 amod whole,extracts
R22232 T28462 T28463 compound cell,extracts
R22233 T28463 T28460 pobj extracts,in
R22234 T28464 T28455 punct .,measured
R22235 T28465 T28466 punct (,B
R22236 T28466 T28466 ROOT B,B
R22237 T28467 T28466 punct ),B
R22238 T28468 T28469 det The,binding
R22239 T28469 T28478 nsubjpass binding,measured
R22240 T28470 T28469 prep of,binding
R22241 T28471 T28470 pobj p65,of
R22242 T28472 T28469 prep to,binding
R22243 T28473 T28476 det the,oligonucleotide
R22244 T28474 T28476 nmod NF-κB,oligonucleotide
R22245 T28475 T28476 amod double-stranded,oligonucleotide
R22246 T28476 T28472 pobj oligonucleotide,to
R22247 T28477 T28478 auxpass was,measured
R22248 T28478 T28478 ROOT measured,measured
R22249 T28479 T28478 prep in,measured
R22250 T28480 T28481 amod nuclear,extracts
R22251 T28481 T28479 pobj extracts,in
R22252 T28482 T28481 punct (,extracts
R22253 T28483 T28484 nummod 10,µg
R22254 T28484 T28481 appos µg,extracts
R22255 T28485 T28481 punct ),extracts
R22256 T28486 T28478 advcl using,measured
R22257 T28487 T28493 det the,kit
R22258 T28488 T28491 compound NF-κB,ELISA
R22259 T28489 T28491 compound Transcription,ELISA
R22260 T28490 T28491 compound Factor,ELISA
R22261 T28491 T28493 compound ELISA,kit
R22262 T28492 T28493 compound assay,kit
R22263 T28493 T28486 dobj kit,using
R22264 T28494 T28493 punct (,kit
R22265 T28495 T28493 appos Cayman,kit
R22266 T28496 T28493 punct ),kit
R22267 T28497 T28478 punct .,measured
R22268 T28498 T28499 punct (,C
R22269 T28499 T28499 ROOT C,C
R22270 T28500 T28499 punct ),C
R22271 T28501 T28503 det The,content
R22272 T28502 T28503 amod IκB-α,content
R22273 T28503 T28505 nsubjpass content,analysed
R22274 T28504 T28505 auxpass was,analysed
R22275 T28505 T28505 ROOT analysed,analysed
R22276 T28506 T28505 prep by,analysed
R22277 T28507 T28508 nummod 12,%
R22278 T28508 T28509 compound %,SDS
R22279 T28509 T28506 pobj SDS,by
R22280 T28510 T28509 conj PAGE,SDS
R22281 T28511 T28510 cc and,PAGE
R22282 T28512 T28513 amod western,blotting
R22283 T28513 T28510 conj blotting,PAGE
R22284 T28514 T28513 prep of,blotting
R22285 T28515 T28516 amod cytosolic,extracts
R22286 T28516 T28514 pobj extracts,of
R22287 T28517 T28516 punct (,extracts
R22288 T28518 T28519 nummod 20,µg
R22289 T28519 T28516 appos µg,extracts
R22290 T28520 T28516 punct ),extracts
R22291 T28521 T28505 advcl using,analysed
R22292 T28522 T28523 amod anti-IκB-α,antibody
R22293 T28523 T28521 dobj antibody,using
R22294 T28524 T28505 punct .,analysed
R22295 T28525 T28526 compound Densitometry,values
R22296 T28526 T28534 nsubjpass values,expressed
R22297 T28527 T28528 punct (,D
R22298 T28528 T28526 appos D,values
R22299 T28529 T28528 punct ),D
R22300 T28530 T28528 prep of,D
R22301 T28531 T28532 det the,bands
R22302 T28532 T28530 pobj bands,of
R22303 T28533 T28534 auxpass were,expressed
R22304 T28534 T28534 ROOT expressed,expressed
R22305 T28535 T28536 mark as,fold
R22306 T28536 T28534 advcl fold,expressed
R22307 T28537 T28536 dobj increase,fold
R22308 T28538 T28536 prep above,fold
R22309 T28539 T28540 det the,control
R22310 T28540 T28538 pobj control,above
R22311 T28541 T28540 punct (,control
R22312 T28542 T28540 amod mock,control
R22313 T28543 T28540 punct ),control
R22314 T28544 T28534 punct .,expressed
R22315 T28545 T28551 punct (,measured
R22316 T28546 T28549 compound D,activity
R22317 T28547 T28548 punct ),IKK
R22318 T28548 T28549 compound IKK,activity
R22319 T28549 T28551 nsubjpass activity,measured
R22320 T28550 T28551 auxpass was,measured
R22321 T28551 T28551 ROOT measured,measured
R22322 T28552 T28551 prep in,measured
R22323 T28553 T28554 amod cytosolic,cell
R22324 T28554 T28555 compound cell,extracts
R22325 T28555 T28552 pobj extracts,in
R22326 T28556 T28555 punct (,extracts
R22327 T28557 T28558 nummod 100,µg
R22328 T28558 T28555 appos µg,extracts
R22329 T28559 T28555 punct ),extracts
R22330 T28560 T28551 advcl using,measured
R22331 T28561 T28564 compound HTScan,Assay
R22332 T28562 T28564 compound IKK,Assay
R22333 T28563 T28564 compound Kinase,Assay
R22334 T28564 T28560 dobj Assay,using
R22335 T28565 T28568 punct (,Technology
R22336 T28566 T28568 compound Cell,Technology
R22337 T28567 T28568 compound Signaling,Technology
R22338 T28568 T28564 appos Technology,Assay
R22339 T28569 T28564 punct ),Assay
R22340 T28570 T28551 punct .,measured
R22341 T28571 T28582 punct (,infected
R22342 T28572 T28575 nmod E,cells
R22343 T28573 T28572 punct ),E
R22344 T28574 T28575 compound U937,cells
R22345 T28575 T28582 nsubjpass cells,infected
R22346 T28576 T28575 punct (,cells
R22347 T28577 T28579 nummod 5,107
R22348 T28578 T28579 quantmod ×,107
R22349 T28579 T28575 appos 107,cells
R22350 T28580 T28575 punct ),cells
R22351 T28581 T28582 auxpass were,infected
R22352 T28582 T28582 ROOT infected,infected
R22353 T28583 T28582 prep with,infected
R22354 T28584 T28585 amod HXB2-pseudotyped,NL4-3
R22355 T28585 T28583 pobj NL4-3,with
R22356 T28586 T28582 punct .,infected
R22357 T28587 T28587 ROOT FLAG-Tat,FLAG-Tat
R22358 T28588 T28587 punct .,FLAG-Tat
R22359 T28589 T28593 nmod R,virions
R22360 T28590 T28593 nummod −,virions
R22361 T28591 T28592 compound E,−
R22362 T28592 T28593 nummod −,virions
R22363 T28593 T28596 nsubj virions,left
R22364 T28594 T28593 punct ",",virions
R22365 T28595 T28593 cc or,virions
R22366 T28596 T28596 ROOT left,left
R22367 T28597 T28596 oprd uninfected,left
R22368 T28598 T28596 punct .,left
R22369 T28599 T28600 nummod Twenty-four-hour,post-infection
R22370 T28600 T28609 nsubjpass post-infection,immunoprecipitated
R22371 T28601 T28603 punct ",",extracts
R22372 T28602 T28603 compound cell,extracts
R22373 T28603 T28600 appos extracts,post-infection
R22374 T28604 T28603 punct (,extracts
R22375 T28605 T28606 nummod 1,mg
R22376 T28606 T28603 appos mg,extracts
R22377 T28607 T28603 punct ),extracts
R22378 T28608 T28609 auxpass were,immunoprecipitated
R22379 T28609 T28609 ROOT immunoprecipitated,immunoprecipitated
R22380 T28610 T28609 prep with,immunoprecipitated
R22381 T28611 T28614 nmod protein,antibody
R22382 T28612 T28614 amod G-Sepharose-coupled,antibody
R22383 T28613 T28614 amod anti-FLAG,antibody
R22384 T28614 T28610 pobj antibody,with
R22385 T28615 T28609 punct .,immunoprecipitated
R22386 T28616 T28618 nsubjpass Immunocomplexes,separated
R22387 T28617 T28618 auxpass were,separated
R22388 T28618 T28618 ROOT separated,separated
R22389 T28619 T28618 prep by,separated
R22390 T28620 T28621 nummod 12,%
R22391 T28621 T28619 pobj %,by
R22392 T28622 T28623 compound SDS,PAGE
R22393 T28623 T28618 npadvmod PAGE,separated
R22394 T28624 T28623 cc and,PAGE
R22395 T28625 T28623 conj analysed,PAGE
R22396 T28626 T28625 agent by,analysed
R22397 T28627 T28628 amod western,blotting
R22398 T28628 T28626 pobj blotting,by
R22399 T28629 T28628 prep with,blotting
R22400 T28630 T28635 amod anti-p65,antibodies
R22401 T28631 T28630 punct ",",anti-p65
R22402 T28632 T28630 conj anti-FLAG,anti-p65
R22403 T28633 T28632 cc and,anti-FLAG
R22404 T28634 T28632 conj anti-IκB-α,anti-FLAG
R22405 T28635 T28629 pobj antibodies,with
R22406 T28636 T28618 punct .,separated
R22407 T28637 T28648 punct (,transfected
R22408 T28638 T28641 compound F,cells
R22409 T28639 T28640 punct ),U937
R22410 T28640 T28641 compound U937,cells
R22411 T28641 T28648 nsubjpass cells,transfected
R22412 T28642 T28641 punct (,cells
R22413 T28643 T28645 quantmod 5,107
R22414 T28644 T28645 quantmod ×,107
R22415 T28645 T28641 appos 107,cells
R22416 T28646 T28641 punct ),cells
R22417 T28647 T28648 auxpass were,transfected
R22418 T28648 T28673 ccomp transfected,infected
R22419 T28649 T28648 prep with,transfected
R22420 T28650 T28651 compound siRNA,Tat
R22421 T28651 T28649 pobj Tat,with
R22422 T28652 T28648 punct ",",transfected
R22423 T28653 T28648 dep siRNA,transfected
R22424 T28654 T28653 appos p65,siRNA
R22425 T28655 T28653 punct ",",siRNA
R22426 T28656 T28657 compound siRNA,control
R22427 T28657 T28653 appos control,siRNA
R22428 T28658 T28660 punct (,nmol
R22429 T28659 T28660 nummod 2,nmol
R22430 T28660 T28657 appos nmol,control
R22431 T28661 T28657 punct ),control
R22432 T28662 T28653 punct ",",siRNA
R22433 T28663 T28648 cc or,transfected
R22434 T28664 T28648 conj left,transfected
R22435 T28665 T28664 oprd untransfected,left
R22436 T28666 T28673 punct ;,infected
R22437 T28667 T28668 nummod 24,h
R22438 T28668 T28669 npadvmod h,later
R22439 T28669 T28673 advmod later,infected
R22440 T28670 T28673 punct ",",infected
R22441 T28671 T28673 nsubjpass cells,infected
R22442 T28672 T28673 auxpass were,infected
R22443 T28673 T28673 ROOT infected,infected
R22444 T28674 T28673 prep with,infected
R22445 T28675 T28676 amod HXB2-pseudotyped,NL4-3
R22446 T28676 T28674 pobj NL4-3,with
R22447 T28677 T28673 punct .,infected
R22448 T28678 T28678 ROOT FLAG-Tat,FLAG-Tat
R22449 T28679 T28678 punct .,FLAG-Tat
R22450 T28680 T28684 nmod R,virions
R22451 T28681 T28684 nummod −,virions
R22452 T28682 T28683 compound E,−
R22453 T28683 T28684 nummod −,virions
R22454 T28684 T28687 nsubj virions,left
R22455 T28685 T28684 punct ",",virions
R22456 T28686 T28684 cc or,virions
R22457 T28687 T28687 ROOT left,left
R22458 T28688 T28687 oprd uninfected,left
R22459 T28689 T28687 punct .,left
R22460 T28690 T28691 nummod Twenty-four-hour,post-infection
R22461 T28691 T28695 nsubj post-infection,was
R22462 T28692 T28691 punct ",",post-infection
R22463 T28693 T28694 amod total,RNA
R22464 T28694 T28691 appos RNA,post-infection
R22465 T28695 T28695 ROOT was,was
R22466 T28696 T28695 attr analysed,was
R22467 T28697 T28696 prep for,analysed
R22468 T28698 T28699 amod MIP-1α,expression
R22469 T28699 T28697 pobj expression,for
R22470 T28700 T28699 prep by,expression
R22471 T28701 T28702 amod real-time,PCR
R22472 T28702 T28700 pobj PCR,by
R22473 T28703 T28695 punct .,was
R22474 T28704 T28709 punct (,U937
R22475 T28705 T28709 nmod G,U937
R22476 T28706 T28705 cc and,G
R22477 T28707 T28705 conj H,G
R22478 T28708 T28709 punct ),U937
R22479 T28709 T28710 compound U937,cells
R22480 T28710 T28717 nsubjpass cells,transfected
R22481 T28711 T28710 punct (,cells
R22482 T28712 T28714 quantmod 5,107
R22483 T28713 T28714 quantmod ×,107
R22484 T28714 T28710 appos 107,cells
R22485 T28715 T28710 punct ),cells
R22486 T28716 T28717 auxpass were,transfected
R22487 T28717 T28739 ccomp transfected,infected
R22488 T28718 T28717 prep with,transfected
R22489 T28719 T28720 compound siRNA,Tat
R22490 T28720 T28718 pobj Tat,with
R22491 T28721 T28720 cc or,Tat
R22492 T28722 T28723 compound siRNA,control
R22493 T28723 T28720 conj control,Tat
R22494 T28724 T28726 punct (,nmol
R22495 T28725 T28726 nummod 2,nmol
R22496 T28726 T28723 appos nmol,control
R22497 T28727 T28726 punct ),nmol
R22498 T28728 T28723 punct ",",control
R22499 T28729 T28723 cc or,control
R22500 T28730 T28717 advcl left,transfected
R22501 T28731 T28730 oprd untransfected,left
R22502 T28732 T28739 punct ;,infected
R22503 T28733 T28734 nummod 24,h
R22504 T28734 T28735 npadvmod h,later
R22505 T28735 T28739 advmod later,infected
R22506 T28736 T28739 punct ",",infected
R22507 T28737 T28739 nsubjpass cells,infected
R22508 T28738 T28739 auxpass were,infected
R22509 T28739 T28739 ROOT infected,infected
R22510 T28740 T28739 prep with,infected
R22511 T28741 T28742 amod HXB2-pseudotyped,NL4-3
R22512 T28742 T28740 pobj NL4-3,with
R22513 T28743 T28739 punct .,infected
R22514 T28744 T28744 ROOT FLAG-Tat,FLAG-Tat
R22515 T28745 T28744 punct .,FLAG-Tat
R22516 T28746 T28750 nmod R,virions
R22517 T28747 T28750 nummod −,virions
R22518 T28748 T28749 compound E,−
R22519 T28749 T28750 nummod −,virions
R22520 T28750 T28753 nsubj virions,left
R22521 T28751 T28750 punct ",",virions
R22522 T28752 T28750 cc or,virions
R22523 T28753 T28753 ROOT left,left
R22524 T28754 T28753 oprd uninfected,left
R22525 T28755 T28753 punct .,left
R22526 T28756 T28757 nummod Twenty-four-hour,post-infection
R22527 T28757 T28761 npadvmod post-infection,performed
R22528 T28758 T28761 punct ",",performed
R22529 T28759 T28761 nsubjpass ChIP,performed
R22530 T28760 T28761 auxpass was,performed
R22531 T28761 T28761 ROOT performed,performed
R22532 T28762 T28761 prep with,performed
R22533 T28763 T28762 pobj anti-p65,with
R22534 T28764 T28765 punct (,G
R22535 T28765 T28763 appos G,anti-p65
R22536 T28766 T28761 punct ),performed
R22537 T28767 T28761 cc or,performed
R22538 T28768 T28761 conj anti-FLAG,performed
R22539 T28769 T28770 punct (,H
R22540 T28770 T28768 appos H,anti-FLAG
R22541 T28771 T28768 punct ),anti-FLAG
R22542 T28772 T28761 punct .,performed
R22543 T28773 T28774 compound Real-time,PCR
R22544 T28774 T28776 nsubjpass PCR,performed
R22545 T28775 T28776 auxpass was,performed
R22546 T28776 T28776 ROOT performed,performed
R22547 T28777 T28776 prep with,performed
R22548 T28778 T28777 pobj primers,with
R22549 T28779 T28778 amod specific,primers
R22550 T28780 T28779 prep for,specific
R22551 T28781 T28780 pobj MIP-1α,for
R22552 T28782 T28781 cc and,MIP-1α
R22553 T28783 T28781 conj GAPDH,MIP-1α
R22554 T28784 T28778 conj promoters,primers
R22555 T28785 T28776 punct .,performed
R22556 T28786 T28797 nsubjpass Values,shown
R22557 T28787 T28790 punct (,SE
R22558 T28788 T28790 amod mean,SE
R22559 T28789 T28790 compound ±,SE
R22560 T28790 T28786 appos SE,Values
R22561 T28791 T28790 punct ",",SE
R22562 T28792 T28797 nsubjpass n,shown
R22563 T28793 T28794 punct =,3
R22564 T28794 T28792 advmod 3,n
R22565 T28795 T28797 punct ),shown
R22566 T28796 T28797 auxpass are,shown
R22567 T28797 T28797 ROOT shown,shown
R22568 T28798 T28797 punct .,shown
R22569 T28799 T28800 det The,asterisks
R22570 T28800 T28801 nsubj asterisks,indicate
R22571 T28801 T28801 ROOT indicate,indicate
R22572 T28802 T28803 advmod statistically,significant
R22573 T28803 T28804 amod significant,differences
R22574 T28804 T28801 dobj differences,indicate
R22575 T28805 T28804 acl compared,differences
R22576 T28806 T28805 prep to,compared
R22577 T28807 T28808 det the,control
R22578 T28808 T28806 pobj control,to
R22579 T28809 T28808 punct (,control
R22580 T28810 T28808 amod mock,control
R22581 T28811 T28808 punct ),control
R22582 T28812 T28801 punct ",",indicate
R22583 T28813 T28801 prep according,indicate
R22584 T28814 T28813 prep to,according
R22585 T28815 T28816 det the,Student
R22586 T28816 T28818 poss Student,t-test
R22587 T28817 T28816 case 's,Student
R22588 T28818 T28814 pobj t-test,to
R22589 T28819 T28818 punct (,t-test
R22590 T28820 T28823 nmod P,)
R22591 T28821 T28820 nummod <,P
R22592 T28822 T28820 nummod 0.05,P
R22593 T28823 T28818 punct ),t-test
R22594 T28824 T28801 punct .,indicate
R14695 T18350 T18351 compound E,−
R14696 T18351 T18352 nummod −,virions
R14697 T18352 T18349 appos virions,−
R14698 T18353 T18352 punct ",",virions
R14699 T18354 T18356 nsubjpass which,used
R14700 T18355 T18356 auxpass were,used
R14701 T18356 T18352 relcl used,virions
R14702 T18357 T18356 prep in,used
R14703 T18358 T18359 amod single-round,infection
R14704 T18359 T18357 pobj infection,in
R14705 T18360 T18359 prep of,infection
R14706 T18361 T18360 pobj U937,of
R14707 T18362 T18361 punct ",",U937
R14708 T18363 T18367 det a,line
R14709 T18364 T18366 amod human,cell
R14710 T18365 T18366 compound monocytic,cell
R14711 T18366 T18367 compound cell,line
R14712 T18367 T18361 appos line,U937
R14713 T18368 T18349 punct .,−
R14714 T18369 T18371 nsubjpass Cells,transfected
R14715 T18370 T18371 auxpass were,transfected
R14716 T18371 T18371 ROOT transfected,transfected
R14717 T18372 T18371 prep with,transfected
R14718 T18373 T18374 compound siRNA,Tat
R14719 T18374 T18372 pobj Tat,with
R14720 T18375 T18371 punct ",",transfected
R14721 T18376 T18377 compound siRNA,control
R14722 T18377 T18379 nsubj control,left
R14723 T18378 T18377 cc or,control
R14724 T18379 T18371 advcl left,transfected
R14725 T18380 T18379 oprd untransfected,left
R14726 T18381 T18382 aux to,modulate
R14727 T18382 T18379 advcl modulate,left
R14728 T18383 T18385 det the,expression
R14729 T18384 T18385 compound Tat,expression
R14730 T18385 T18382 dobj expression,modulate
R14731 T18386 T18379 punct ",",left
R14732 T18387 T18379 cc and,left
R14733 T18388 T18389 advmod then,analysed
R14775 T18430 T18431 amod NF-κB,activity
R14776 T18431 T18441 nsubjpass activity,induced
R14777 T18432 T18431 punct ",",activity
R14778 T18433 T18434 mark as,measured
R14779 T18434 T18431 advcl measured,activity
R14780 T18435 T18434 agent by,measured
R14781 T18436 T18437 nummod p65,DNA
R14782 T18437 T18435 pobj DNA,by
R14783 T18438 T18437 amod binding,DNA
R14784 T18439 T18441 punct ",",induced
R14785 T18440 T18441 auxpass was,induced
R14786 T18441 T18441 ROOT induced,induced
R14787 T18442 T18441 prep at,induced
R14788 T18443 T18444 amod 3-h,post-infection
R14789 T18444 T18442 pobj post-infection,at
R14790 T18445 T18444 prep in,post-infection
R14791 T18446 T18447 det both,Tat-positive
R14792 T18447 T18457 nmod Tat-positive,cells
R14932 T18587 T18585 appos Figure,p65
R14933 T18588 T18587 nummod 6E,Figure
R14934 T18589 T18587 punct ),Figure
R14935 T18590 T18581 punct ",",coimmunoprecipitated
R14936 T18591 T18581 cc and,coimmunoprecipitated
R14937 T18592 T18581 conj activated,coimmunoprecipitated
R14938 T18593 T18595 det the,expression
R14939 T18594 T18595 amod MIP-1α,expression
R14940 T18595 T18592 dobj expression,activated
R14941 T18596 T18592 prep in,activated
R14942 T18597 T18599 det a,manner
R14943 T18598 T18599 amod p65-dependent,manner
R14944 T18599 T18596 pobj manner,in
R14945 T18600 T18592 punct ",",activated
R14946 T18601 T18602 mark as,shown
R14947 T18602 T18592 advcl shown,activated
R14948 T18603 T18602 agent by,shown
R14949 T18604 T18605 det the,lack
R14950 T18605 T18603 pobj lack,by
R14951 T18606 T18605 prep of,lack
R14952 T18607 T18606 pobj effect,of
R14953 T18608 T18605 prep following,lack
R14954 T18609 T18610 compound RNA,interference
R14955 T18610 T18608 pobj interference,following
R14956 T18611 T18610 prep of,interference
R14957 T18612 T18611 pobj Tat,of
R14958 T18613 T18610 cc or,interference
R14959 T18614 T18610 conj p65,interference
R14960 T18615 T18616 punct (,Figure
R14961 T18616 T18605 appos Figure,lack
R14962 T18617 T18616 nummod 6F,Figure
R14963 T18618 T18616 punct ),Figure
R14964 T18619 T18581 punct .,coimmunoprecipitated
R14965 T18620 T18627 advmod Moreover,recruited
R14966 T18621 T18627 punct ",",recruited
R14967 T18622 T18627 nsubjpass Tat,recruited
R14968 T18623 T18622 cc and,Tat
R15010 T18665 T18664 cc and,IκB-α
R15011 T18666 T18664 conj p65,IκB-α
R15012 T18667 T18662 punct ",",associated
R15013 T18668 T18662 cc and,associated
R15014 T18669 T18662 conj induced,associated
R15015 T18670 T18672 det the,activation
R15016 T18671 T18672 amod p65-dependent,activation
R15017 T18672 T18669 dobj activation,induced
R15018 T18673 T18672 prep of,activation
R15019 T18674 T18675 amod MIP-1α,expression
R15020 T18675 T18673 pobj expression,of
R15021 T18676 T18669 prep through,induced
R15022 T18677 T18676 pobj occupancy,through
R15023 T18678 T18677 prep of,occupancy
R15024 T18679 T18681 det the,promoter
R15025 T18680 T18681 amod MIP-1α,promoter
R15026 T18681 T18678 pobj promoter,of
R15027 T18682 T18669 cc and,induced
R15028 T18683 T18669 conj increased,induced
R15029 T18684 T18683 dobj recruitment,increased
R15030 T18685 T18684 prep of,recruitment
R15031 T18686 T18685 pobj p65,of
R15032 T18687 T18654 punct .,indicated

GO-BP

Id Subject Object Predicate Lexical cue
T18688 77-92 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T18689 581-597 http://purl.obolibrary.org/obo/GO_0051092 denotes NF-κB activation
T18690 3595-3611 http://purl.obolibrary.org/obo/GO_0051092 denotes NF-κB activation
T18691 608-623 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T18692 3345-3354 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T18693 3437-3440 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK
T18694 3993-4009 http://purl.obolibrary.org/obo/GO_0016246 denotes RNA interference
T28825 1380-1393 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T28826 1655-1658 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK
T28827 1730-1733 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK

GO-MF

Id Subject Object Predicate Lexical cue
T18696 3065-3076 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T18697 3069-3076 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T18698 3437-3440 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK
T28828 1263-1270 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T28829 1546-1554 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T28830 2007-2015 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T28831 2137-2147 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T28832 1655-1658 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK
T28833 1730-1733 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK

GO-CC

Id Subject Object Predicate Lexical cue
T18699 348-355 http://purl.obolibrary.org/obo/GO_0019012 denotes virions
T18700 426-430 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T18701 752-757 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T18702 3179-3184 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T18703 3241-3246 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T18704 3654-3659 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T18705 3806-3811 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T28834 908-913 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T28835 1015-1020 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T28836 1785-1790 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T28837 2158-2163 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T28838 2277-2282 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T28839 2479-2484 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T28840 2589-2594 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T28841 1077-1084 http://purl.obolibrary.org/obo/GO_0019012 denotes virions
T28842 1857-1864 http://purl.obolibrary.org/obo/GO_0019012 denotes virions
T28843 2339-2346 http://purl.obolibrary.org/obo/GO_0019012 denotes virions
T28844 2651-2658 http://purl.obolibrary.org/obo/GO_0019012 denotes virions
T28845 1546-1554 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T28846 2007-2015 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T28847 2137-2147 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T28848 1546-1554 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T28849 2007-2015 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T28850 2137-2147 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies

sentences

Id Subject Object Predicate Lexical cue
T17783 0-147 Sentence denotes In HIV-1-infected monocytes Tat sustains the NF-κB activity and promotes the transcriptional activation of MIP-1α by interacting with IκB-α and p65
T17784 148-267 Sentence denotes We next analysed whether Tat affected the NF-κB activity and the expression of MIP-1α in the course of HIV-1 infection.
T17785 268-436 Sentence denotes To detect the Tat protein, we produced HXB2 Env-pseudotyped NL4-3.FLAG-Tat.R−E− virions, which were used in single-round infection of U937, a human monocytic cell line.
T17786 437-624 Sentence denotes Cells were transfected with siRNA Tat, siRNA control or left untransfected to modulate the Tat expression, and then analysed for the kinetic of NF-κB activation following viral infection.
T17787 625-770 Sentence denotes The expression of Tat and p24 was detected at 3- to 12-h post-infection, while it was barely detected in siRNA Tat-transfected cells (Figure 6A).
T17788 3026-3259 Sentence denotes The NF-κB activity, as measured by p65 DNA binding, was induced at 3-h post-infection in both Tat-positive (no siRNA and siRNA control) and Tat-negative cells (siRNA Tat), and increased at 12 h only in Tat-positive cells (Figure 6B).
T17789 3260-3418 Sentence denotes Degradation of IκB-α was observed at 3-h post-infection, and was followed by de novo synthesis of IκB-α at 12 h independently of the Tat presence (Figure 6C).
T17790 3419-3553 Sentence denotes Consistently, the IKK activity was induced at 3-h post-infection and turned off at 12 h independently of the Tat presence (Figure 6D).
T17791 3554-3782 Sentence denotes These results agreed with the kinetic of NF-κB activation in single-round HIV-1 infection of Jurkat cells (Figure 1), and further supported the requirement of viral expression to counteract the post-activation turn off of NF-κB.
T17792 3783-4036 Sentence denotes In HIV-1-infected U937 cells, the endogenous Tat was coimmunoprecipitated with IκB-α and p65 (Figure 6E), and activated the MIP-1α expression in a p65-dependent manner, as shown by the lack of effect following RNA interference of Tat or p65 (Figure 6F).
T17793 4037-4181 Sentence denotes Moreover, Tat and p65 were both recruited to the NF-κB enhancer of MIP-1α, while the p65 occupancy was abolished by siRNA Tat (Figure 6G and H).
T17794 4182-4425 Sentence denotes Altogether these results indicated that in single round HIV-1 infection Tat associated with IκB-α and p65, and induced the p65-dependent activation of MIP-1α expression through occupancy of the MIP-1α promoter and increased recruitment of p65.
T28289 781-902 Sentence denotes In HIV-1 infection Tat sustains the NF-κB activity and enhances the MIP-1α expression via interaction with IκB-α and p65.
T28290 903-1555 Sentence denotes U937 cells (5 × 107) were transfected with siRNA Tat, siRNA control (2 nmol), or left untransfected; 24 h later cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions (500 ng of p24) and harvested at the indicated time. (A) Real-time PCR of total RNA measured the Tat expression; ELISA measured the amount of p24 in whole cell extracts. (B) The binding of p65 to the NF-κB double-stranded oligonucleotide was measured in nuclear extracts (10 µg) using the NF-κB Transcription Factor ELISA assay kit (Cayman). (C) The IκB-α content was analysed by 12% SDS–PAGE and western blotting of cytosolic extracts (20 µg) using anti-IκB-α antibody.
T28291 1556-1885 Sentence denotes Densitometry values (D) of the bands were expressed as fold increase above the control (mock). (D) IKK activity was measured in cytosolic cell extracts (100 µg) using HTScan IKK Kinase Assay (Cell Signaling Technology). (E) U937 cells (5 × 107) were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected.
T28292 1886-2016 Sentence denotes Twenty-four-hour post-infection, cell extracts (1 mg) were immunoprecipitated with protein G-Sepharose-coupled anti-FLAG antibody.
T28293 2017-2367 Sentence denotes Immunocomplexes were separated by 12% SDS–PAGE and analysed by western blotting with anti-p65, anti-FLAG and anti-IκB-α antibodies. (F) U937 cells (5 × 107) were transfected with siRNA Tat, siRNA p65, siRNA control (2 nmol), or left untransfected; 24 h later, cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected.
T28294 2368-2679 Sentence denotes Twenty-four-hour post-infection, total RNA was analysed for MIP-1α expression by real-time PCR. (G and H) U937 cells (5 × 107) were transfected with siRNA Tat or siRNA control (2 nmol), or left untransfected; 24 h later, cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected.
T28295 2680-2767 Sentence denotes Twenty-four-hour post-infection, ChIP was performed with anti-p65 (G) or anti-FLAG (H).
T28296 2768-2849 Sentence denotes Real-time PCR was performed with primers specific for MIP-1α and GAPDH promoters.
T28297 2850-2886 Sentence denotes Values (mean ± SE, n = 3) are shown.
T28298 2887-3025 Sentence denotes The asterisks indicate statistically significant differences compared to the control (mock), according to the Student's t-test (P < 0.05).
T209 0-147 Sentence denotes In HIV-1-infected monocytes Tat sustains the NF-κB activity and promotes the transcriptional activation of MIP-1α by interacting with IκB-α and p65
T210 148-267 Sentence denotes We next analysed whether Tat affected the NF-κB activity and the expression of MIP-1α in the course of HIV-1 infection.
T211 268-436 Sentence denotes To detect the Tat protein, we produced HXB2 Env-pseudotyped NL4-3.FLAG-Tat.R−E− virions, which were used in single-round infection of U937, a human monocytic cell line.
T212 437-624 Sentence denotes Cells were transfected with siRNA Tat, siRNA control or left untransfected to modulate the Tat expression, and then analysed for the kinetic of NF-κB activation following viral infection.
T213 625-770 Sentence denotes The expression of Tat and p24 was detected at 3- to 12-h post-infection, while it was barely detected in siRNA Tat-transfected cells (Figure 6A).
T214 771-780 Sentence denotes Figure 6.
T215 781-902 Sentence denotes In HIV-1 infection Tat sustains the NF-κB activity and enhances the MIP-1α expression via interaction with IκB-α and p65.
T216 903-1555 Sentence denotes U937 cells (5 × 107) were transfected with siRNA Tat, siRNA control (2 nmol), or left untransfected; 24 h later cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions (500 ng of p24) and harvested at the indicated time. (A) Real-time PCR of total RNA measured the Tat expression; ELISA measured the amount of p24 in whole cell extracts. (B) The binding of p65 to the NF-κB double-stranded oligonucleotide was measured in nuclear extracts (10 µg) using the NF-κB Transcription Factor ELISA assay kit (Cayman). (C) The IκB-α content was analysed by 12% SDS–PAGE and western blotting of cytosolic extracts (20 µg) using anti-IκB-α antibody.
T217 1556-1885 Sentence denotes Densitometry values (D) of the bands were expressed as fold increase above the control (mock). (D) IKK activity was measured in cytosolic cell extracts (100 µg) using HTScan IKK Kinase Assay (Cell Signaling Technology). (E) U937 cells (5 × 107) were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected.
T218 1886-2016 Sentence denotes Twenty-four-hour post-infection, cell extracts (1 mg) were immunoprecipitated with protein G-Sepharose-coupled anti-FLAG antibody.
T219 2017-2367 Sentence denotes Immunocomplexes were separated by 12% SDS–PAGE and analysed by western blotting with anti-p65, anti-FLAG and anti-IκB-α antibodies. (F) U937 cells (5 × 107) were transfected with siRNA Tat, siRNA p65, siRNA control (2 nmol), or left untransfected; 24 h later, cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected.
T220 2368-2679 Sentence denotes Twenty-four-hour post-infection, total RNA was analysed for MIP-1α expression by real-time PCR. (G and H) U937 cells (5 × 107) were transfected with siRNA Tat or siRNA control (2 nmol), or left untransfected; 24 h later, cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected.
T221 2680-2767 Sentence denotes Twenty-four-hour post-infection, ChIP was performed with anti-p65 (G) or anti-FLAG (H).
T222 2768-2849 Sentence denotes Real-time PCR was performed with primers specific for MIP-1α and GAPDH promoters.
T223 2850-2886 Sentence denotes Values (mean ± SE, n = 3) are shown.
T224 2887-3025 Sentence denotes The asterisks indicate statistically significant differences compared to the control (mock), according to the Student's t-test (P < 0.05).
T225 3026-3259 Sentence denotes The NF-κB activity, as measured by p65 DNA binding, was induced at 3-h post-infection in both Tat-positive (no siRNA and siRNA control) and Tat-negative cells (siRNA Tat), and increased at 12 h only in Tat-positive cells (Figure 6B).
T226 3260-3418 Sentence denotes Degradation of IκB-α was observed at 3-h post-infection, and was followed by de novo synthesis of IκB-α at 12 h independently of the Tat presence (Figure 6C).
T227 3419-3553 Sentence denotes Consistently, the IKK activity was induced at 3-h post-infection and turned off at 12 h independently of the Tat presence (Figure 6D).
T228 3554-3782 Sentence denotes These results agreed with the kinetic of NF-κB activation in single-round HIV-1 infection of Jurkat cells (Figure 1), and further supported the requirement of viral expression to counteract the post-activation turn off of NF-κB.
T229 3783-4036 Sentence denotes In HIV-1-infected U937 cells, the endogenous Tat was coimmunoprecipitated with IκB-α and p65 (Figure 6E), and activated the MIP-1α expression in a p65-dependent manner, as shown by the lack of effect following RNA interference of Tat or p65 (Figure 6F).
T230 4037-4181 Sentence denotes Moreover, Tat and p65 were both recruited to the NF-κB enhancer of MIP-1α, while the p65 occupancy was abolished by siRNA Tat (Figure 6G and H).
T231 4182-4425 Sentence denotes Altogether these results indicated that in single round HIV-1 infection Tat associated with IκB-α and p65, and induced the p65-dependent activation of MIP-1α expression through occupancy of the MIP-1α promoter and increased recruitment of p65.

ICD10

Id Subject Object Predicate Lexical cue
T18695 608-623 http://purl.bioontology.org/ontology/ICD10/B34.9 denotes viral infection

events-check-again

Id Subject Object Predicate Lexical cue Negation Speculation
T19087 28-31 Protein denotes Tat
T19088 64-72 Positive_regulation denotes promotes
T19089 77-92 Transcription denotes transcriptional
T19090 93-103 Positive_regulation denotes activation
T19091 107-113 Protein denotes MIP-1α
T19092 114-116 Positive_regulation denotes by
T19093 117-128 Binding denotes interacting
T19094 134-139 Protein denotes IκB-α
T19095 144-147 Protein denotes p65
T19096 173-176 Protein denotes Tat
T19097 177-185 Regulation denotes affected true
T19098 213-223 Gene_expression denotes expression
T19099 227-233 Protein denotes MIP-1α
T19100 282-285 Protein denotes Tat
T19101 312-315 Protein denotes Env
T19102 334-342 Protein denotes FLAG-Tat
T19103 465-474 Protein denotes siRNA Tat
T19104 515-523 Regulation denotes modulate
T19105 528-531 Protein denotes Tat
T19106 532-542 Gene_expression denotes expression
T19107 629-639 Gene_expression denotes expression
T19108 629-639 Gene_expression denotes expression
T19109 643-646 Protein denotes Tat
T19110 651-654 Protein denotes p24
T19111 718-726 Negative_regulation denotes detected
T19112 718-726 Negative_regulation denotes detected
T19113 730-739 Protein denotes siRNA Tat
T19114 3061-3064 Protein denotes p65
T19115 3069-3076 Binding denotes binding
T19116 3082-3089 Positive_regulation denotes induced
T19117 3120-3123 Protein denotes Tat
T19118 3166-3169 Protein denotes Tat
T19119 3186-3195 Protein denotes siRNA Tat
T19120 3202-3211 Positive_regulation denotes increased
T19121 3228-3231 Protein denotes Tat
T19122 3260-3271 Protein_catabolism denotes Degradation
T19123 3275-3280 Protein denotes IκB-α
T19124 3325-3333 Positive_regulation denotes followed
T19125 3345-3354 Gene_expression denotes synthesis
T19126 3358-3363 Protein denotes IκB-α
T19127 3372-3385 Regulation denotes independently true
T19128 3393-3396 Protein denotes Tat
T19129 3528-3531 Protein denotes Tat
T19130 3828-3831 Protein denotes Tat
T19131 3836-3856 Binding denotes coimmunoprecipitated
T19132 3862-3867 Protein denotes IκB-α
T19133 3872-3875 Protein denotes p65
T19134 3893-3902 Positive_regulation denotes activated
T19135 3907-3913 Protein denotes MIP-1α
T19136 3914-3924 Gene_expression denotes expression
T19137 3930-3933 Protein denotes p65
T19138 3934-3943 Positive_regulation denotes dependent
T19139 3968-3972 Negative_regulation denotes lack
T19140 3983-3992 Positive_regulation denotes following
T19141 4013-4016 Protein denotes Tat
T19142 4020-4023 Protein denotes p65
T19143 4047-4050 Protein denotes Tat
T19144 4055-4058 Protein denotes p65
T19145 4069-4078 Binding denotes recruited
T19146 4086-4100 Entity denotes NF-κB enhancer
T19147 4104-4110 Protein denotes MIP-1α
T19148 4122-4125 Protein denotes p65
T19149 4126-4135 Binding denotes occupancy
T19150 4140-4149 Negative_regulation denotes abolished
T19151 4153-4162 Protein denotes siRNA Tat
T19152 4254-4257 Protein denotes Tat
T19153 4258-4268 Binding denotes associated
T19154 4274-4279 Protein denotes IκB-α
T19155 4284-4287 Protein denotes p65
T19156 4293-4300 Positive_regulation denotes induced
T19157 4305-4308 Protein denotes p65
T19158 4319-4329 Positive_regulation denotes activation
T19159 4333-4339 Protein denotes MIP-1α
T19160 4340-4350 Gene_expression denotes expression
T19161 4359-4368 Binding denotes occupancy
T19162 4376-4382 Protein denotes MIP-1α
T19163 4383-4391 Entity denotes promoter
T19164 4396-4405 Positive_regulation denotes increased
T19165 4406-4417 Binding denotes recruitment
T19166 4421-4424 Protein denotes p65
T28984 800-803 Protein denotes Tat
T28985 836-844 Positive_regulation denotes enhances
T28986 849-855 Protein denotes MIP-1α
T28987 856-866 Gene_expression denotes expression
T28988 871-882 Binding denotes interaction
T28989 888-893 Protein denotes IκB-α
T28990 898-901 Protein denotes p65
T28991 946-955 Protein denotes siRNA Tat
T28992 1063-1071 Protein denotes FLAG-Tat
T28993 1096-1099 Protein denotes p24
T28994 1182-1185 Protein denotes Tat
T28995 1186-1196 Gene_expression denotes expression true
T28996 1227-1230 Protein denotes p24
T28997 1263-1270 Binding denotes binding true
T28998 1274-1277 Protein denotes p65
T28999 1435-1440 Protein denotes IκB-α
T29000 1843-1851 Protein denotes FLAG-Tat
T29001 1969-1978 Protein denotes protein G
T29002 2196-2205 Protein denotes siRNA Tat
T29003 2207-2216 Protein denotes siRNA p65
T29004 2325-2333 Protein denotes FLAG-Tat
T29005 2428-2434 Protein denotes MIP-1α
T29006 2435-2445 Gene_expression denotes expression true
T29007 2517-2526 Protein denotes siRNA Tat
T29008 2637-2645 Protein denotes FLAG-Tat
T29009 2822-2828 Protein denotes MIP-1α
T29010 2833-2838 Protein denotes GAPDH
R15286 T19087 T19093 themeOf Tat,interacting
R15287 T19088 T19092 themeOf promotes,by
R15288 T19089 T19090 themeOf transcriptional,activation
R15289 T19090 T19088 themeOf activation,promotes
R15290 T19091 T19089 themeOf MIP-1α,transcriptional
R15291 T19093 T19092 causeOf interacting,by
R15292 T19094 T19093 themeOf IκB-α,interacting
R15293 T19096 T19097 causeOf Tat,affected
R15294 T19098 T19097 themeOf expression,affected
R15295 T19099 T19098 themeOf MIP-1α,expression
R15296 T19105 T19106 themeOf Tat,expression
R15297 T19106 T19104 themeOf expression,modulate
R15298 T19107 T19111 themeOf expression,detected
R15299 T19108 T19112 themeOf expression,detected
R15300 T19109 T19108 themeOf Tat,expression
R15301 T19110 T19107 themeOf p24,expression
R15302 T19113 T19112 causeOf siRNA Tat,detected
R15303 T19113 T19111 causeOf siRNA Tat,detected
R15304 T19114 T19115 themeOf p65,binding
R15305 T19115 T19116 themeOf binding,induced
R15306 T19115 T19120 themeOf binding,increased
R15307 T19121 T19120 causeOf Tat,increased
R15308 T19122 T19124 causeOf Degradation,followed
R15309 T19123 T19122 themeOf IκB-α,Degradation
R15310 T19125 T19124 themeOf synthesis,followed
R15311 T19125 T19127 themeOf synthesis,independently
R15312 T19126 T19125 themeOf IκB-α,synthesis
R15313 T19128 T19127 causeOf Tat,independently
R15314 T19130 T19131 themeOf Tat,coimmunoprecipitated
R15315 T19130 T19134 causeOf Tat,activated
R15316 T19132 T19131 themeOf IκB-α,coimmunoprecipitated
R15317 T19134 T19138 causeOf activated,dependent
R15318 T19134 T19139 themeOf activated,lack
R15319 T19135 T19136 themeOf MIP-1α,expression
R15320 T19136 T19138 themeOf expression,dependent
R15321 T19137 T19134 themeOf p65,activated
R15322 T19139 T19140 themeOf lack,following
R15323 T19143 T19145 themeOf Tat,recruited
R15324 T19146 T19145 themeOf NF-κB enhancer,recruited
R15325 T19146 T19147 partOf NF-κB enhancer,MIP-1α
R15326 T19146 T19149 themeOf NF-κB enhancer,occupancy
R15327 T19148 T19149 themeOf p65,occupancy
R15328 T19149 T19150 themeOf occupancy,abolished
R15329 T19151 T19150 causeOf siRNA Tat,abolished
R15330 T19152 T19153 themeOf Tat,associated
R15331 T19152 T19161 themeOf Tat,occupancy
R15332 T19152 T19164 causeOf Tat,increased
R15333 T19154 T19153 themeOf IκB-α,associated
R15334 T19157 T19158 causeOf p65,activation
R15335 T19158 T19156 themeOf activation,induced
R15336 T19159 T19160 themeOf MIP-1α,expression
R15337 T19160 T19158 themeOf expression,activation
R15338 T19163 T19161 themeOf promoter,occupancy
R15339 T19163 T19162 partOf promoter,MIP-1α
R15340 T19163 T19165 themeOf promoter,recruitment
R15341 T19165 T19164 themeOf recruitment,increased
R15342 T19166 T19165 themeOf p65,recruitment
R22632 T28984 T28988 themeOf Tat,interaction
R22633 T28986 T28987 themeOf MIP-1α,expression
R22634 T28987 T28985 themeOf expression,enhances
R22635 T28988 T28985 causeOf interaction,enhances
R22636 T28989 T28988 themeOf IκB-α,interaction
R22637 T28994 T28995 themeOf Tat,expression
R22638 T28998 T28997 themeOf p65,binding
R22639 T29005 T29006 themeOf MIP-1α,expression

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T19167 28-31 Protein denotes Tat
T19168 45-50 Protein denotes NF-κB
T19169 107-113 Protein denotes MIP-1α
T19170 134-139 Protein denotes IκB-α
T19171 93-103 Positive_regulation denotes activation
T19172 117-128 Binding denotes interacting
T19173 64-72 Positive_regulation denotes promotes
T19174 173-176 Protein denotes Tat
T19175 190-195 Protein denotes NF-κB
T19176 227-233 Protein denotes MIP-1α
T19177 213-223 Gene_expression denotes expression
T19178 177-185 Regulation denotes affected
T19179 282-293 Protein denotes Tat protein
T19180 307-315 Protein denotes HXB2 Env
T19181 271-277 Gene_expression denotes detect
T19182 465-481 Protein denotes siRNA Tat, siRNA
T19183 528-531 Protein denotes Tat
T19184 581-586 Protein denotes NF-κB
T19185 532-542 Gene_expression denotes expression
T19186 515-523 Regulation denotes modulate
T19187 643-646 Protein denotes Tat
T19188 651-654 Protein denotes p24
T19189 736-739 Protein denotes Tat
T19190 629-639 Gene_expression denotes expression
T19191 629-639 Gene_expression denotes expression
T19192 740-751 Gene_expression denotes transfected
T19193 740-751 Positive_regulation denotes transfected
T19194 3030-3035 Protein denotes NF-κB
T19195 3120-3123 Protein denotes Tat
T19196 3166-3169 Protein denotes Tat
T19197 3192-3195 Protein denotes Tat
T19198 3228-3231 Protein denotes Tat
T19199 3082-3089 Positive_regulation denotes induced
T19200 3170-3178 Gene_expression denotes negative
T19201 3170-3178 Gene_expression denotes negative
T19202 3202-3211 Positive_regulation denotes increased
T19203 3232-3240 Gene_expression denotes positive
T19204 3275-3280 Protein denotes IκB-α
T19205 3358-3363 Protein denotes IκB-α
T19206 3393-3396 Protein denotes Tat
T19207 3260-3271 Protein_catabolism denotes Degradation
T19208 3437-3440 Protein denotes IKK
T19209 3528-3531 Protein denotes Tat
T19210 3454-3461 Positive_regulation denotes induced
T19211 3595-3600 Protein denotes NF-κB
T19212 3776-3781 Protein denotes NF-κB
T19213 3601-3611 Positive_regulation denotes activation
T19214 3828-3831 Protein denotes Tat
T19215 3862-3867 Protein denotes IκB-α
T19216 3907-3913 Protein denotes MIP-1α
T19217 3930-3933 Protein denotes p65
T19218 4013-4016 Protein denotes Tat
T19219 3836-3856 Binding denotes coimmunoprecipitated
T19220 3914-3924 Gene_expression denotes expression
T19221 3997-4009 Negative_regulation denotes interference
T19222 3893-3902 Positive_regulation denotes activated
T19223 4047-4050 Protein denotes Tat
T19224 4055-4058 Protein denotes p65
T19225 4086-4100 Protein denotes NF-κB enhancer
T19226 4104-4110 Protein denotes MIP-1α
T19227 4122-4125 Protein denotes p65
T19228 4126-4135 Positive_regulation denotes occupancy
T19229 4140-4149 Negative_regulation denotes abolished
T19230 4274-4279 Protein denotes IκB-α
T19231 4284-4287 Protein denotes p65
T19232 4305-4308 Protein denotes p65
T19233 4333-4339 Protein denotes MIP-1α
T19234 4376-4391 Protein denotes MIP-1α promoter
T19235 4421-4424 Protein denotes p65
T19236 4258-4268 Binding denotes associated
T19237 4258-4268 Binding denotes associated
T19238 4340-4350 Gene_expression denotes expression
T19239 4406-4417 Binding denotes recruitment
T19240 4319-4329 Positive_regulation denotes activation
T19241 4293-4300 Positive_regulation denotes induced
T29011 817-822 Protein denotes NF-κB
T29012 849-855 Protein denotes MIP-1α
T29013 888-893 Protein denotes IκB-α
T29014 898-901 Protein denotes p65
T29015 856-866 Gene_expression denotes expression
T29016 871-882 Binding denotes interaction
T29017 836-844 Positive_regulation denotes enhances
T29018 946-955 Protein denotes siRNA Tat
T29019 1096-1099 Protein denotes p24
T29020 1182-1185 Protein denotes Tat
T29021 1227-1230 Protein denotes p24
T29022 1186-1196 Gene_expression denotes expression
T29023 1274-1277 Protein denotes p65
T29024 1285-1290 Protein denotes NF-κB
T29025 1374-1379 Protein denotes NF-κB
T29026 1307-1322 Entity denotes oligonucleotide
T29027 1263-1270 Binding denotes binding
T29028 1435-1440 Protein denotes IκB-α
T29029 1535-1554 Protein denotes anti-IκB-α antibody
T29030 1529-1534 Gene_expression denotes using
T29031 1655-1658 Protein denotes IKK
T29032 1723-1733 Protein denotes HTScan IKK
T29033 1969-2015 Protein denotes protein G-Sepharose-coupled anti-FLAG antibody
T29034 2107-2110 Protein denotes p65
T29035 2112-2121 Protein denotes anti-FLAG
T29036 2126-2147 Protein denotes anti-IκB-α antibodies
T29037 2196-2205 Protein denotes siRNA Tat
T29038 2207-2216 Protein denotes siRNA p65
T29039 2428-2434 Protein denotes MIP-1α
T29040 2435-2445 Gene_expression denotes expression
T29041 2517-2535 Protein denotes siRNA Tat or siRNA
T29042 2822-2828 Protein denotes MIP-1α
T29043 2833-2838 Protein denotes GAPDH
R15343 T19169 T19171 themeOf MIP-1α,activation
R15344 T19170 T19172 themeOf IκB-α,interacting
R15345 T19171 T19173 themeOf activation,promotes
R15346 T19172 T19173 causeOf interacting,promotes
R15347 T19174 T19178 causeOf Tat,affected
R15348 T19176 T19177 themeOf MIP-1α,expression
R15349 T19177 T19178 themeOf expression,affected
R15350 T19179 T19181 themeOf Tat protein,detect
R15351 T19183 T19185 themeOf Tat,expression
R15352 T19185 T19186 themeOf expression,modulate
R15353 T19187 T19190 themeOf Tat,expression
R15354 T19188 T19191 themeOf p24,expression
R15355 T19189 T19192 themeOf Tat,transfected
R15356 T19192 T19193 themeOf transfected,transfected
R15357 T19194 T19199 themeOf NF-κB,induced
R15358 T19194 T19202 themeOf NF-κB,increased
R15359 T19196 T19200 themeOf Tat,negative
R15360 T19197 T19201 themeOf Tat,negative
R15361 T19198 T19203 themeOf Tat,positive
R15362 T19204 T19207 themeOf IκB-α,Degradation
R15363 T19208 T19210 themeOf IKK,induced
R15364 T19211 T19213 themeOf NF-κB,activation
R15365 T19214 T19219 themeOf Tat,coimmunoprecipitated
R15366 T19214 T19222 causeOf Tat,activated
R15367 T19215 T19219 themeOf IκB-α,coimmunoprecipitated
R15368 T19216 T19220 themeOf MIP-1α,expression
R15369 T19218 T19221 themeOf Tat,interference
R15370 T19220 T19222 themeOf expression,activated
R15371 T19227 T19228 themeOf p65,occupancy
R15372 T19228 T19229 themeOf occupancy,abolished
R15373 T19230 T19236 themeOf IκB-α,associated
R15374 T19231 T19237 themeOf p65,associated
R15375 T19233 T19238 themeOf MIP-1α,expression
R15376 T19235 T19239 themeOf p65,recruitment
R15377 T19238 T19240 themeOf expression,activation
R15378 T19240 T19241 themeOf activation,induced
R22640 T29012 T29015 themeOf MIP-1α,expression
R22641 T29013 T29016 themeOf IκB-α,interaction
R22642 T29015 T29017 themeOf expression,enhances
R22643 T29016 T29017 causeOf interaction,enhances
R22644 T29020 T29022 themeOf Tat,expression
R22645 T29023 T29027 themeOf p65,binding
R22646 T29024 T29027 themeOf NF-κB,binding
R22647 T29024 T29026 partOf NF-κB,oligonucleotide
R22648 T29026 T29027 Site oligonucleotide,binding
R22649 T29029 T29030 themeOf anti-IκB-α antibody,using
R22650 T29039 T29040 themeOf MIP-1α,expression

test2

Id Subject Object Predicate Lexical cue Negation Speculation
T17625 28-31 Protein denotes Tat
T17626 64-72 Positive_regulation denotes promotes
T17627 93-103 Positive_regulation denotes activation
T17628 107-113 Protein denotes MIP-1α
T17629 117-128 Binding denotes interacting
T17630 134-139 Protein denotes IκB-α true
T17631 144-147 Protein denotes p65
T17632 173-176 Protein denotes Tat
T17633 213-223 Gene_expression denotes expression
T17634 227-233 Protein denotes MIP-1α
T17635 282-285 Protein denotes Tat
T17636 298-306 Gene_expression denotes produced
T17637 312-315 Protein denotes Env
T17638 334-342 Protein denotes FLAG-Tat
T17639 465-474 Protein denotes siRNA Tat
T17640 515-523 Regulation denotes modulate
T17641 528-531 Protein denotes Tat
T17642 532-542 Gene_expression denotes expression
T17643 629-639 Gene_expression denotes expression
T17644 643-646 Protein denotes Tat true
T17645 651-654 Protein denotes p24
T17646 730-739 Protein denotes siRNA Tat
T17647 3061-3064 Protein denotes p65
T17648 3069-3076 Binding denotes binding
T17649 3082-3089 Positive_regulation denotes induced
T17650 3120-3123 Protein denotes Tat
T17651 3166-3169 Protein denotes Tat
T17652 3170-3178 Gene_expression denotes negative
T17653 3186-3195 Protein denotes siRNA Tat
T17654 3202-3211 Positive_regulation denotes increased
T17655 3228-3231 Protein denotes Tat
T17656 3232-3240 Gene_expression denotes positive
T17657 3260-3271 Protein_catabolism denotes Degradation
T17658 3275-3280 Protein denotes IκB-α
T17659 3325-3333 Positive_regulation denotes followed
T17660 3345-3354 Gene_expression denotes synthesis
T17661 3358-3363 Protein denotes IκB-α
T17662 3393-3396 Protein denotes Tat
T17663 3454-3461 Positive_regulation denotes induced
T17664 3528-3531 Protein denotes Tat
T17665 3828-3831 Protein denotes Tat
T17666 3836-3856 Binding denotes coimmunoprecipitated
T17667 3862-3867 Protein denotes IκB-α
T17668 3872-3875 Protein denotes p65
T17669 3893-3902 Positive_regulation denotes activated
T17670 3907-3913 Protein denotes MIP-1α
T17671 3914-3924 Gene_expression denotes expression
T17672 3930-3933 Protein denotes p65
T17673 3934-3943 Regulation denotes dependent
T17674 3968-3972 Negative_regulation denotes lack
T17675 3983-3992 Positive_regulation denotes following
T17676 3997-4009 Negative_regulation denotes interference
T17677 4013-4016 Protein denotes Tat
T17678 4020-4023 Protein denotes p65
T17679 4047-4050 Protein denotes Tat
T17680 4055-4058 Protein denotes p65
T17681 4069-4078 Binding denotes recruited
T17682 4086-4100 Entity denotes NF-κB enhancer
T17683 4104-4110 Protein denotes MIP-1α
T17684 4122-4125 Protein denotes p65
T17685 4126-4135 Binding denotes occupancy
T17686 4140-4149 Negative_regulation denotes abolished
T17687 4153-4162 Protein denotes siRNA Tat
T17688 4254-4257 Protein denotes Tat
T17689 4258-4268 Binding denotes associated
T17690 4274-4279 Protein denotes IκB-α
T17691 4284-4287 Protein denotes p65
T17692 4293-4300 Positive_regulation denotes induced
T17693 4305-4308 Protein denotes p65
T17694 4309-4318 Regulation denotes dependent
T17695 4319-4329 Positive_regulation denotes activation
T17696 4333-4339 Protein denotes MIP-1α
T17697 4340-4350 Gene_expression denotes expression
T17698 4359-4368 Binding denotes occupancy
T17699 4376-4382 Protein denotes MIP-1α
T17700 4396-4405 Positive_regulation denotes increased
T17701 4406-4417 Binding denotes recruitment
T17702 4421-4424 Protein denotes p65
T28234 800-803 Protein denotes Tat
T28235 836-844 Positive_regulation denotes enhances
T28236 849-855 Protein denotes MIP-1α
T28237 856-866 Gene_expression denotes expression true
T28238 871-882 Binding denotes interaction true
T28239 888-893 Protein denotes IκB-α true
T28240 898-901 Protein denotes p65
T28241 946-955 Protein denotes siRNA Tat
T28242 1063-1071 Protein denotes FLAG-Tat
T28243 1096-1099 Protein denotes p24
T28244 1182-1185 Protein denotes Tat
T28245 1186-1196 Gene_expression denotes expression
T28246 1227-1230 Protein denotes p24
T28247 1263-1270 Binding denotes binding
T28248 1274-1277 Protein denotes p65
T28249 1435-1440 Protein denotes IκB-α
T28250 1843-1851 Protein denotes FLAG-Tat
T28251 1969-1978 Protein denotes protein G
T28252 2196-2205 Protein denotes siRNA Tat
T28253 2207-2216 Protein denotes siRNA p65
T28254 2325-2333 Protein denotes FLAG-Tat
T28255 2428-2434 Protein denotes MIP-1α
T28256 2435-2445 Gene_expression denotes expression
T28257 2517-2526 Protein denotes siRNA Tat
T28258 2637-2645 Protein denotes FLAG-Tat
T28259 2822-2828 Protein denotes MIP-1α
T28260 2833-2838 Protein denotes GAPDH
T28261 2839-2848 Entity denotes promoters
R14134 T17625 T17629 themeOf Tat,interacting
R14135 T17625 T17626 causeOf Tat,promotes
R14136 T17627 T17626 themeOf activation,promotes
R14137 T17628 T17629 themeOf MIP-1α,interacting
R14138 T17628 T17627 themeOf MIP-1α,activation
R14139 T17630 T17629 themeOf IκB-α,interacting
R14140 T17634 T17633 themeOf MIP-1α,expression
R14141 T17641 T17642 themeOf Tat,expression
R14142 T17642 T17640 themeOf expression,modulate
R14143 T17644 T17643 themeOf Tat,expression
R14144 T17645 T17643 themeOf p24,expression
R14145 T17647 T17648 themeOf p65,binding
R14146 T17648 T17649 themeOf binding,induced
R14147 T17650 T17649 causeOf Tat,induced
R14148 T17651 T17649 causeOf Tat,induced
R14149 T17651 T17652 themeOf Tat,negative
R14150 T17652 T17649 causeOf negative,induced
R14151 T17653 T17649 causeOf siRNA Tat,induced
R14152 T17655 T17656 themeOf Tat,positive
R14153 T17656 T17649 causeOf positive,induced
R14154 T17658 T17657 themeOf IκB-α,Degradation
R14155 T17660 T17659 themeOf synthesis,followed
R14156 T17661 T17660 themeOf IκB-α,synthesis
R14157 T17664 T17663 causeOf Tat,induced
R14158 T17665 T17666 themeOf Tat,coimmunoprecipitated
R14159 T17665 T17669 causeOf Tat,activated
R14160 T17667 T17666 themeOf IκB-α,coimmunoprecipitated
R14161 T17668 T17666 themeOf p65,coimmunoprecipitated
R14162 T17669 T17673 causeOf activated,dependent
R14163 T17669 T17674 themeOf activated,lack
R14164 T17669 T17675 themeOf activated,following
R14165 T17670 T17671 themeOf MIP-1α,expression
R14166 T17671 T17669 themeOf expression,activated
R14167 T17671 T17673 themeOf expression,dependent
R14168 T17672 T17669 themeOf p65,activated
R14169 T17674 T17675 themeOf lack,following
R14170 T17676 T17675 causeOf interference,following
R14171 T17679 T17681 themeOf Tat,recruited
R14172 T17680 T17681 themeOf p65,recruited
R14173 T17682 T17681 themeOf NF-κB enhancer,recruited
R14174 T17682 T17685 themeOf NF-κB enhancer,occupancy
R14175 T17682 T17683 partOf NF-κB enhancer,MIP-1α
R14176 T17684 T17685 themeOf p65,occupancy
R14177 T17685 T17686 themeOf occupancy,abolished
R14178 T17687 T17686 causeOf siRNA Tat,abolished
R14179 T17688 T17698 themeOf Tat,occupancy
R14180 T17688 T17689 themeOf Tat,associated
R14181 T17690 T17689 themeOf IκB-α,associated
R14182 T17691 T17689 themeOf p65,associated
R14183 T17693 T17694 causeOf p65,dependent
R14184 T17693 T17695 causeOf p65,activation
R14185 T17694 T17692 themeOf dependent,induced
R14186 T17695 T17694 themeOf activation,dependent
R14187 T17696 T17697 themeOf MIP-1α,expression
R14188 T17697 T17695 themeOf expression,activation
R14189 T17698 T17695 causeOf occupancy,activation
R14190 T17698 T17692 causeOf occupancy,induced
R14191 T17701 T17700 themeOf recruitment,increased
R14192 T17702 T17701 themeOf p65,recruitment
R22120 T28234 T28235 causeOf Tat,enhances
R22121 T28234 T28238 themeOf Tat,interaction
R22122 T28236 T28237 themeOf MIP-1α,expression
R22123 T28237 T28235 themeOf expression,enhances
R22124 T28238 T28235 causeOf interaction,enhances
R22125 T28239 T28238 themeOf IκB-α,interaction
R22126 T28244 T28245 themeOf Tat,expression
R22127 T28248 T28247 themeOf p65,binding
R22128 T28255 T28256 themeOf MIP-1α,expression

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation Speculation
T17708 114-116 Positive_regulation denotes by
T17709 117-128 Binding denotes interacting
T17710 134-139 Protein denotes IκB-α
T17711 144-147 Protein denotes p65
T17712 173-176 Protein denotes Tat
T17713 177-185 Regulation denotes affected true
T17714 213-223 Gene_expression denotes expression
T17715 227-233 Protein denotes MIP-1α
T17716 282-285 Protein denotes Tat
T17717 312-315 Protein denotes Env
T17718 334-342 Protein denotes FLAG-Tat
T17719 465-474 Protein denotes siRNA Tat
T17720 515-523 Regulation denotes modulate
T17721 528-531 Protein denotes Tat
T17722 532-542 Gene_expression denotes expression
T17723 629-639 Gene_expression denotes expression
T17724 629-639 Gene_expression denotes expression
T17725 643-646 Protein denotes Tat
T17726 651-654 Protein denotes p24
T17727 718-726 Negative_regulation denotes detected
T17728 718-726 Negative_regulation denotes detected
T17729 730-739 Protein denotes siRNA Tat
T17730 3061-3064 Protein denotes p65
T17731 3069-3076 Binding denotes binding
T17732 3082-3089 Positive_regulation denotes induced
T17733 3120-3123 Protein denotes Tat
T17734 3166-3169 Protein denotes Tat
T17735 3186-3195 Protein denotes siRNA Tat
T17736 3202-3211 Positive_regulation denotes increased
T17737 3228-3231 Protein denotes Tat
T17738 3260-3271 Protein_catabolism denotes Degradation
T17739 3275-3280 Protein denotes IκB-α
T17740 3325-3333 Positive_regulation denotes followed
T17741 3345-3354 Gene_expression denotes synthesis
T17742 3358-3363 Protein denotes IκB-α
T17743 3372-3385 Regulation denotes independently true
T17744 3393-3396 Protein denotes Tat
T17745 3528-3531 Protein denotes Tat
T17746 3828-3831 Protein denotes Tat
T17747 3836-3856 Binding denotes coimmunoprecipitated
T17748 3862-3867 Protein denotes IκB-α
T17749 3872-3875 Protein denotes p65
T17750 3893-3902 Positive_regulation denotes activated
T17751 3907-3913 Protein denotes MIP-1α
T17752 3914-3924 Gene_expression denotes expression
T17753 3930-3933 Protein denotes p65
T17754 3934-3943 Positive_regulation denotes dependent
T17755 3968-3972 Negative_regulation denotes lack
T17756 3983-3992 Positive_regulation denotes following
T17757 4013-4016 Protein denotes Tat
T17758 4020-4023 Protein denotes p65
T17759 4047-4050 Protein denotes Tat
T17760 4055-4058 Protein denotes p65
T17761 4069-4078 Binding denotes recruited
T17762 4086-4100 Entity denotes NF-κB enhancer
T17763 4104-4110 Protein denotes MIP-1α
T17764 4122-4125 Protein denotes p65
T17765 4126-4135 Binding denotes occupancy
T17766 4140-4149 Negative_regulation denotes abolished
T17767 4153-4162 Protein denotes siRNA Tat
T17768 4254-4257 Protein denotes Tat
T17769 4258-4268 Binding denotes associated
T17770 4274-4279 Protein denotes IκB-α
T17771 4284-4287 Protein denotes p65
T17772 4293-4300 Positive_regulation denotes induced
T17773 4305-4308 Protein denotes p65
T17774 4319-4329 Positive_regulation denotes activation
T17775 4333-4339 Protein denotes MIP-1α
T17776 4340-4350 Gene_expression denotes expression
T17777 4359-4368 Binding denotes occupancy
T17778 4376-4382 Protein denotes MIP-1α
T17779 4383-4391 Entity denotes promoter
T17780 4396-4405 Positive_regulation denotes increased
T17781 4406-4417 Binding denotes recruitment
T17782 4421-4424 Protein denotes p65
T17703 28-31 Protein denotes Tat
T17704 64-72 Positive_regulation denotes promotes
T17705 77-92 Transcription denotes transcriptional
T17706 93-103 Positive_regulation denotes activation
T17707 107-113 Protein denotes MIP-1α
T28262 800-803 Protein denotes Tat
T28263 836-844 Positive_regulation denotes enhances
T28264 849-855 Protein denotes MIP-1α
T28265 856-866 Gene_expression denotes expression
T28266 871-882 Binding denotes interaction
T28267 888-893 Protein denotes IκB-α
T28268 898-901 Protein denotes p65
T28269 946-955 Protein denotes siRNA Tat
T28270 1063-1071 Protein denotes FLAG-Tat
T28271 1096-1099 Protein denotes p24
T28272 1182-1185 Protein denotes Tat
T28273 1186-1196 Gene_expression denotes expression true
T28274 1227-1230 Protein denotes p24
T28275 1263-1270 Binding denotes binding true
T28276 1274-1277 Protein denotes p65
T28277 1435-1440 Protein denotes IκB-α
T28278 1843-1851 Protein denotes FLAG-Tat
T28279 1969-1978 Protein denotes protein G
T28280 2196-2205 Protein denotes siRNA Tat
T28281 2207-2216 Protein denotes siRNA p65
T28282 2325-2333 Protein denotes FLAG-Tat
T28283 2428-2434 Protein denotes MIP-1α
T28284 2435-2445 Gene_expression denotes expression true
T28285 2517-2526 Protein denotes siRNA Tat
T28286 2637-2645 Protein denotes FLAG-Tat
T28287 2822-2828 Protein denotes MIP-1α
T28288 2833-2838 Protein denotes GAPDH
R14193 T17703 T17709 themeOf Tat,interacting
R14194 T17704 T17708 themeOf promotes,by
R14197 T17707 T17705 themeOf MIP-1α,transcriptional
R14198 T17709 T17708 causeOf interacting,by
R14205 T17723 T17727 themeOf expression,detected
R14206 T17724 T17728 themeOf expression,detected
R14207 T17725 T17724 themeOf Tat,expression
R14208 T17726 T17723 themeOf p24,expression
R14209 T17729 T17728 causeOf siRNA Tat,detected
R14210 T17729 T17727 causeOf siRNA Tat,detected
R14211 T17730 T17731 themeOf p65,binding
R14212 T17731 T17732 themeOf binding,induced
R14213 T17731 T17736 themeOf binding,increased
R14214 T17737 T17736 causeOf Tat,increased
R14215 T17738 T17740 causeOf Degradation,followed
R14216 T17739 T17738 themeOf IκB-α,Degradation
R14217 T17741 T17740 themeOf synthesis,followed
R14218 T17741 T17743 themeOf synthesis,independently
R14219 T17742 T17741 themeOf IκB-α,synthesis
R14220 T17744 T17743 causeOf Tat,independently
R14221 T17746 T17747 themeOf Tat,coimmunoprecipitated
R14222 T17746 T17750 causeOf Tat,activated
R14223 T17748 T17747 themeOf IκB-α,coimmunoprecipitated
R14224 T17750 T17754 causeOf activated,dependent
R14225 T17750 T17755 themeOf activated,lack
R14226 T17751 T17752 themeOf MIP-1α,expression
R14227 T17752 T17754 themeOf expression,dependent
R14228 T17753 T17750 themeOf p65,activated
R14229 T17755 T17756 themeOf lack,following
R14230 T17759 T17761 themeOf Tat,recruited
R14231 T17762 T17761 themeOf NF-κB enhancer,recruited
R14232 T17762 T17763 partOf NF-κB enhancer,MIP-1α
R14233 T17762 T17765 themeOf NF-κB enhancer,occupancy
R14234 T17764 T17765 themeOf p65,occupancy
R14235 T17765 T17766 themeOf occupancy,abolished
R14236 T17767 T17766 causeOf siRNA Tat,abolished
R14237 T17768 T17769 themeOf Tat,associated
R14238 T17768 T17777 themeOf Tat,occupancy
R14239 T17768 T17780 causeOf Tat,increased
R14240 T17770 T17769 themeOf IκB-α,associated
R14241 T17773 T17774 causeOf p65,activation
R14242 T17774 T17772 themeOf activation,induced
R14243 T17775 T17776 themeOf MIP-1α,expression
R14244 T17776 T17774 themeOf expression,activation
R14245 T17779 T17777 themeOf promoter,occupancy
R14246 T17779 T17778 partOf promoter,MIP-1α
R14247 T17779 T17781 themeOf promoter,recruitment
R14248 T17781 T17780 themeOf recruitment,increased
R14249 T17782 T17781 themeOf p65,recruitment
R14195 T17705 T17706 themeOf transcriptional,activation
R14196 T17706 T17704 themeOf activation,promotes
R14199 T17710 T17709 themeOf IκB-α,interacting
R14200 T17712 T17713 causeOf Tat,affected
R14201 T17714 T17713 themeOf expression,affected
R14202 T17715 T17714 themeOf MIP-1α,expression
R14203 T17721 T17722 themeOf Tat,expression
R14204 T17722 T17720 themeOf expression,modulate
R22129 T28262 T28266 themeOf Tat,interaction
R22130 T28264 T28265 themeOf MIP-1α,expression
R22131 T28265 T28263 themeOf expression,enhances
R22132 T28266 T28263 causeOf interaction,enhances
R22133 T28267 T28266 themeOf IκB-α,interaction
R22134 T28272 T28273 themeOf Tat,expression
R22135 T28276 T28275 themeOf p65,binding
R22136 T28283 T28284 themeOf MIP-1α,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18173 28-31 P04608 denotes Tat
T18174 28-31 P04605 denotes Tat
T18175 28-31 Q8UMQ1 denotes Tat
T18176 28-31 P04610 denotes Tat
T18177 107-113 P10147 denotes MIP-1α
T18178 144-147 P21579 denotes p65
T18179 144-147 Q04206 denotes p65
T18180 173-176 P04610 denotes Tat
T18181 173-176 P04608 denotes Tat
T18182 173-176 Q8UMQ1 denotes Tat
T18183 173-176 P04605 denotes Tat
T18184 227-233 P10147 denotes MIP-1α
T18185 282-285 P04610 denotes Tat
T18186 282-285 Q8UMQ1 denotes Tat
T18187 282-285 P04608 denotes Tat
T18188 282-285 P04605 denotes Tat
T18189 312-315 P04578 denotes Env
T18190 339-342 P04605 denotes Tat
T18191 339-342 P04608 denotes Tat
T18192 339-342 P04610 denotes Tat
T18193 339-342 Q8UMQ1 denotes Tat
T18194 471-474 P04610 denotes Tat
T18195 471-474 P04608 denotes Tat
T18196 471-474 P04605 denotes Tat
T18197 471-474 Q8UMQ1 denotes Tat
T18198 528-531 P04610 denotes Tat
T18199 528-531 P04608 denotes Tat
T18200 528-531 P04605 denotes Tat
T18201 528-531 Q8UMQ1 denotes Tat
T18202 643-646 P04610 denotes Tat
T18203 643-646 P04608 denotes Tat
T18204 643-646 Q8UMQ1 denotes Tat
T18205 643-646 P04605 denotes Tat
T18206 651-654 P04585 denotes p24
T18207 651-654 P03366 denotes p24
T18208 651-654 P04591 denotes p24
T18209 651-654 P12497 denotes p24
T18210 736-739 P04610 denotes Tat
T18211 736-739 P04605 denotes Tat
T18212 736-739 P04608 denotes Tat
T18213 736-739 Q8UMQ1 denotes Tat
T18214 3061-3064 Q04206 denotes p65
T18215 3061-3064 P21579 denotes p65
T18216 3120-3123 P04608 denotes Tat
T18217 3120-3123 P04610 denotes Tat
T18218 3120-3123 P04605 denotes Tat
T18219 3120-3123 Q8UMQ1 denotes Tat
T18220 3166-3169 Q8UMQ1 denotes Tat
T18221 3166-3169 P04610 denotes Tat
T18222 3166-3169 P04608 denotes Tat
T18223 3166-3169 P04605 denotes Tat
T18224 3192-3195 Q8UMQ1 denotes Tat
T18225 3192-3195 P04608 denotes Tat
T18226 3192-3195 P04610 denotes Tat
T18227 3192-3195 P04605 denotes Tat
T18228 3228-3231 Q8UMQ1 denotes Tat
T18229 3228-3231 P04610 denotes Tat
T18230 3228-3231 P04608 denotes Tat
T18231 3228-3231 P04605 denotes Tat
T18232 3393-3396 Q8UMQ1 denotes Tat
T18233 3393-3396 P04610 denotes Tat
T18234 3393-3396 P04605 denotes Tat
T18235 3393-3396 P04608 denotes Tat
T18236 3528-3531 Q8UMQ1 denotes Tat
T18237 3528-3531 P04610 denotes Tat
T18238 3528-3531 P04608 denotes Tat
T18239 3528-3531 P04605 denotes Tat
T18240 3828-3831 P04605 denotes Tat
T18241 3828-3831 P04610 denotes Tat
T18242 3828-3831 Q8UMQ1 denotes Tat
T18243 3828-3831 P04608 denotes Tat
T18244 3872-3875 P21579 denotes p65
T18245 3872-3875 Q04206 denotes p65
T18246 3907-3913 P10147 denotes MIP-1α
T18247 3930-3933 P21579 denotes p65
T18248 3930-3933 Q04206 denotes p65
T18249 4013-4016 P04610 denotes Tat
T18250 4013-4016 P04608 denotes Tat
T18251 4013-4016 P04605 denotes Tat
T18252 4013-4016 Q8UMQ1 denotes Tat
T18253 4020-4023 P21579 denotes p65
T18254 4020-4023 Q04206 denotes p65
T18255 4047-4050 Q8UMQ1 denotes Tat
T18256 4047-4050 P04610 denotes Tat
T18257 4047-4050 P04605 denotes Tat
T18258 4047-4050 P04608 denotes Tat
T18259 4055-4058 Q04206 denotes p65
T18260 4055-4058 P21579 denotes p65
T18261 4104-4110 P10147 denotes MIP-1α
T18262 4122-4125 P21579 denotes p65
T18263 4122-4125 Q04206 denotes p65
T18264 4159-4162 P04608 denotes Tat
T18265 4159-4162 P04610 denotes Tat
T18266 4159-4162 Q8UMQ1 denotes Tat
T18267 4159-4162 P04605 denotes Tat
T18268 4254-4257 P04608 denotes Tat
T18269 4254-4257 Q8UMQ1 denotes Tat
T18270 4254-4257 P04610 denotes Tat
T18271 4254-4257 P04605 denotes Tat
T18272 4284-4287 P21579 denotes p65
T18273 4284-4287 Q04206 denotes p65
T18274 4305-4308 P21579 denotes p65
T18275 4305-4308 Q04206 denotes p65
T18276 4333-4339 P10147 denotes MIP-1α
T18277 4376-4382 P10147 denotes MIP-1α
T18278 4421-4424 Q04206 denotes p65
T18279 4421-4424 P21579 denotes p65
T28299 800-803 Q8UMQ1 denotes Tat
T28300 800-803 P04608 denotes Tat
T28301 800-803 P04610 denotes Tat
T28302 800-803 P04605 denotes Tat
T28303 849-855 P10147 denotes MIP-1α
T28304 898-901 P21579 denotes p65
T28305 898-901 Q04206 denotes p65
T28306 952-955 P04608 denotes Tat
T28307 952-955 P04605 denotes Tat
T28308 952-955 P04610 denotes Tat
T28309 952-955 Q8UMQ1 denotes Tat
T28310 1068-1071 P04608 denotes Tat
T28311 1068-1071 P04610 denotes Tat
T28312 1068-1071 Q8UMQ1 denotes Tat
T28313 1068-1071 P04605 denotes Tat
T28314 1096-1099 P04591 denotes p24
T28315 1096-1099 P12497 denotes p24
T28316 1096-1099 P03366 denotes p24
T28317 1096-1099 P04585 denotes p24
T28318 1182-1185 P04605 denotes Tat
T28319 1182-1185 Q8UMQ1 denotes Tat
T28320 1182-1185 P04610 denotes Tat
T28321 1182-1185 P04608 denotes Tat
T28322 1227-1230 P03366 denotes p24
T28323 1227-1230 P12497 denotes p24
T28324 1227-1230 P04591 denotes p24
T28325 1227-1230 P04585 denotes p24
T28326 1274-1277 Q04206 denotes p65
T28327 1274-1277 P21579 denotes p65
T28328 1848-1851 Q8UMQ1 denotes Tat
T28329 1848-1851 P04610 denotes Tat
T28330 1848-1851 P04608 denotes Tat
T28331 1848-1851 P04605 denotes Tat
T28332 2107-2110 Q04206 denotes p65
T28333 2107-2110 P21579 denotes p65
T28334 2202-2205 P04605 denotes Tat
T28335 2202-2205 P04608 denotes Tat
T28336 2202-2205 Q8UMQ1 denotes Tat
T28337 2202-2205 P04610 denotes Tat
T28338 2213-2216 Q04206 denotes p65
T28339 2213-2216 P21579 denotes p65
T28340 2330-2333 Q8UMQ1 denotes Tat
T28341 2330-2333 P04610 denotes Tat
T28342 2330-2333 P04605 denotes Tat
T28343 2330-2333 P04608 denotes Tat
T28344 2428-2434 P10147 denotes MIP-1α
T28345 2523-2526 P04608 denotes Tat
T28346 2523-2526 P04610 denotes Tat
T28347 2523-2526 P04605 denotes Tat
T28348 2523-2526 Q8UMQ1 denotes Tat
T28349 2642-2645 P04608 denotes Tat
T28350 2642-2645 P04610 denotes Tat
T28351 2642-2645 Q8UMQ1 denotes Tat
T28352 2642-2645 P04605 denotes Tat
T28353 2742-2745 P21579 denotes p65
T28354 2742-2745 Q04206 denotes p65
T28355 2822-2828 P10147 denotes MIP-1α
T28356 2833-2838 P04406 denotes GAPDH