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PMC:3333881 / 33116-33331 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22187158-10751368-77584452 113-115 10751368 denotes 57
22187158-19596987-77584453 116-118 19596987 denotes 58
22187158-8570619-77584454 181-183 8570619 denotes 59
22187158-11602715-77584455 184-186 11602715 denotes 60
22187158-10751368-77584456 205-207 10751368 denotes 57
22187158-10964543-77584457 208-210 10964543 denotes 61
22187158-20403075-77584458 211-213 20403075 denotes 62

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15475 0-12 RB denotes Consistently
T15476 13-17 IN denotes with
T15477 18-21 PRP-DOLLAR- denotes our
T15478 22-30 NN denotes findings
T15479 30-31 -COMMA- denotes ,
T15480 32-38 NN denotes MIP-1α
T15481 39-49 NN denotes expression
T15482 50-53 VB denotes was
T15483 54-63 VB denotes increased
T15484 64-66 IN denotes in
T15485 67-72 JJ denotes glial
T15486 73-78 NN denotes cells
T15487 79-82 CC denotes and
T15488 83-88 NN denotes lymph
T15489 89-94 NN denotes nodes
T15490 95-97 IN denotes of
T15491 98-102 NN denotes AIDS
T15492 103-111 NN denotes patients
T15493 112-113 -LRB- denotes (
T15494 113-118 CD denotes 57,58
T15495 118-119 -RRB- denotes )
T15496 119-120 -COLON- denotes ;
T15497 121-129 RB denotes moreover
T15498 129-130 -COMMA- denotes ,
T15499 131-137 NN denotes MIP-1α
T15500 138-148 NN denotes production
T15501 149-152 VB denotes was
T15502 153-160 VB denotes induced
T15503 161-163 IN denotes by
T15504 164-169 NN denotes HIV-1
T15505 170-179 NN denotes infection
T15506 180-181 -LRB- denotes (
T15507 181-186 CD denotes 59,60
T15508 186-187 -RRB- denotes )
T15509 188-191 CC denotes and
T15510 192-195 NN denotes Tat
T15511 196-203 NN denotes protein
T15512 204-205 -LRB- denotes (
T15513 205-213 CD denotes 57,61,62
T15514 213-214 -RRB- denotes )
R12429 T15478 T15476 arg2Of findings,with
R12430 T15478 T15477 arg1Of findings,our
R12431 T15481 T15480 arg1Of expression,MIP-1α
R12432 T15481 T15482 arg1Of expression,was
R12433 T15481 T15483 arg2Of expression,increased
R12434 T15483 T15475 arg1Of increased,Consistently
R12435 T15483 T15476 arg1Of increased,with
R12436 T15483 T15479 arg1Of increased,","
R12437 T15483 T15482 arg2Of increased,was
R12438 T15483 T15484 arg1Of increased,in
R12439 T15483 T15496 arg1Of increased,;
R12440 T15486 T15485 arg1Of cells,glial
R12441 T15486 T15487 arg1Of cells,and
R12442 T15487 T15484 arg2Of and,in
R12443 T15489 T15487 arg2Of nodes,and
R12444 T15489 T15488 arg1Of nodes,lymph
R12445 T15489 T15490 arg1Of nodes,of
R12446 T15492 T15490 arg2Of patients,of
R12447 T15492 T15491 arg1Of patients,AIDS
R12448 T15492 T15493 arg1Of patients,(
R12449 T15494 T15493 arg2Of "57,58",(
R12450 T15495 T15493 arg3Of ),(
R12451 T15500 T15499 arg1Of production,MIP-1α
R12452 T15500 T15501 arg1Of production,was
R12453 T15500 T15502 arg2Of production,induced
R12454 T15502 T15496 arg2Of induced,;
R12455 T15502 T15497 arg1Of induced,moreover
R12456 T15502 T15498 arg1Of induced,","
R12457 T15502 T15501 arg2Of induced,was
R12458 T15505 T15504 arg1Of infection,HIV-1
R12459 T15505 T15506 arg1Of infection,(
R12460 T15505 T15509 arg1Of infection,and
R12461 T15507 T15506 arg2Of "59,60",(
R12462 T15508 T15506 arg3Of ),(
R12463 T15509 T15502 arg1Of and,induced
R12464 T15509 T15503 arg2Of and,by
R12465 T15511 T15509 arg2Of protein,and
R12466 T15511 T15510 arg1Of protein,Tat
R12467 T15511 T15512 arg1Of protein,(
R12468 T15513 T15512 arg2Of "57,61,62",(
R12469 T15514 T15512 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16248 0-12 RB denotes Consistently
T16249 13-17 IN denotes with
T16250 18-21 PRP$ denotes our
T16251 22-30 NNS denotes findings
T16252 30-31 , denotes ,
T16253 32-38 JJ denotes MIP-1α
T16254 39-49 NN denotes expression
T16255 50-53 VBD denotes was
T16256 54-63 VBN denotes increased
T16257 64-66 IN denotes in
T16258 67-72 JJ denotes glial
T16259 73-78 NNS denotes cells
T16260 79-82 CC denotes and
T16261 83-88 JJ denotes lymph
T16262 89-94 NNS denotes nodes
T16263 95-97 IN denotes of
T16264 98-102 NNP denotes AIDS
T16265 103-111 NNS denotes patients
T16266 112-113 -LRB- denotes (
T16267 113-118 CD denotes 57,58
T16268 118-119 -RRB- denotes )
T16269 119-120 : denotes ;
T16270 121-129 RB denotes moreover
T16271 129-130 , denotes ,
T16272 131-137 JJ denotes MIP-1α
T16273 138-148 NN denotes production
T16274 149-152 VBD denotes was
T16275 153-160 VBN denotes induced
T16276 161-163 IN denotes by
T16277 164-169 NNP denotes HIV-1
T16278 170-179 NN denotes infection
T16279 180-181 -LRB- denotes (
T16280 181-186 CD denotes 59,60
T16281 186-187 -RRB- denotes )
T16282 188-191 CC denotes and
T16283 192-195 NNP denotes Tat
T16284 196-203 NN denotes protein
T16285 204-205 -LRB- denotes (
T16286 205-213 CD denotes 57,61,62
T16287 213-214 -RRB- denotes )
T16288 214-215 . denotes .
R13038 T16248 T16256 advmod Consistently,increased
R13039 T16249 T16248 prep with,Consistently
R13040 T16250 T16251 poss our,findings
R13041 T16251 T16249 pobj findings,with
R13042 T16252 T16256 punct ",",increased
R13043 T16253 T16254 amod MIP-1α,expression
R13044 T16254 T16256 nsubjpass expression,increased
R13045 T16255 T16256 auxpass was,increased
R13046 T16256 T16275 ccomp increased,induced
R13047 T16257 T16256 prep in,increased
R13048 T16258 T16259 amod glial,cells
R13049 T16259 T16257 pobj cells,in
R13050 T16260 T16259 cc and,cells
R13051 T16261 T16262 amod lymph,nodes
R13052 T16262 T16259 conj nodes,cells
R13053 T16263 T16262 prep of,nodes
R13054 T16264 T16265 compound AIDS,patients
R13055 T16265 T16263 pobj patients,of
R13056 T16266 T16265 punct (,patients
R13057 T16267 T16265 appos "57,58",patients
R13058 T16268 T16265 punct ),patients
R13059 T16269 T16275 punct ;,induced
R13060 T16270 T16275 advmod moreover,induced
R13061 T16271 T16275 punct ",",induced
R13062 T16272 T16273 compound MIP-1α,production
R13063 T16273 T16275 nsubjpass production,induced
R13064 T16274 T16275 auxpass was,induced
R13065 T16275 T16275 ROOT induced,induced
R13066 T16276 T16275 agent by,induced
R13067 T16277 T16278 compound HIV-1,infection
R13068 T16278 T16276 pobj infection,by
R13069 T16279 T16280 punct (,"59,60"
R13070 T16280 T16278 appos "59,60",infection
R13071 T16281 T16275 punct ),induced
R13072 T16282 T16275 cc and,induced
R13073 T16283 T16284 compound Tat,protein
R13074 T16284 T16275 conj protein,induced
R13075 T16285 T16286 punct (,"57,61,62"
R13076 T16286 T16284 appos "57,61,62",protein
R13077 T16287 T16284 punct ),protein
R13078 T16288 T16275 punct .,induced

UBERON-AE

Id Subject Object Predicate Lexical cue
T15077 83-88 http://purl.obolibrary.org/obo/UBERON_0002391 denotes lymph
T15078 83-94 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph nodes

GO-CC

Id Subject Object Predicate Lexical cue
T16627 73-78 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T15227 0-215 Sentence denotes Consistently with our findings, MIP-1α expression was increased in glial cells and lymph nodes of AIDS patients (57,58); moreover, MIP-1α production was induced by HIV-1 infection (59,60) and Tat protein (57,61,62).
T199 0-215 Sentence denotes Consistently with our findings, MIP-1α expression was increased in glial cells and lymph nodes of AIDS patients (57,58); moreover, MIP-1α production was induced by HIV-1 infection (59,60) and Tat protein (57,61,62).

events-check-again

Id Subject Object Predicate Lexical cue
T17318 32-38 Protein denotes MIP-1α
T17319 39-49 Gene_expression denotes expression
T17320 54-63 Positive_regulation denotes increased
T17321 131-137 Protein denotes MIP-1α
T17322 138-148 Gene_expression denotes production
T17323 153-160 Positive_regulation denotes induced
T17324 192-195 Protein denotes Tat
R13931 T17318 T17319 themeOf MIP-1α,expression
R13932 T17319 T17320 themeOf expression,increased
R13933 T17321 T17322 themeOf MIP-1α,production
R13934 T17322 T17323 themeOf production,induced
R13935 T17324 T17323 causeOf Tat,induced

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T17458 32-38 Protein denotes MIP-1α
T17459 131-137 Protein denotes MIP-1α
T17460 192-195 Protein denotes Tat
T17461 39-49 Gene_expression denotes expression
T17462 54-63 Positive_regulation denotes increased
T17463 138-148 Gene_expression denotes production
T17464 153-160 Positive_regulation denotes induced
R14036 T17458 T17461 themeOf MIP-1α,expression
R14037 T17459 T17463 themeOf MIP-1α,production
R14038 T17460 T17464 causeOf Tat,induced
R14039 T17461 T17462 themeOf expression,increased
R14040 T17463 T17464 themeOf production,induced

test2

Id Subject Object Predicate Lexical cue Negation
T15001 32-38 Protein denotes MIP-1α
T15002 39-49 Gene_expression denotes expression true
T15003 54-63 Positive_regulation denotes increased
T15004 131-137 Protein denotes MIP-1α
T15005 138-148 Gene_expression denotes production
T15006 153-160 Positive_regulation denotes induced
T15007 192-195 Protein denotes Tat
R12018 T15001 T15002 themeOf MIP-1α,expression
R12019 T15002 T15003 themeOf expression,increased
R12020 T15004 T15005 themeOf MIP-1α,production
R12021 T15005 T15006 themeOf production,induced
R12022 T15007 T15006 causeOf Tat,induced

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T15135 32-38 Protein denotes MIP-1α
T15136 39-49 Gene_expression denotes expression
T15137 54-63 Positive_regulation denotes increased
T15138 131-137 Protein denotes MIP-1α
T15139 138-148 Gene_expression denotes production
T15140 153-160 Positive_regulation denotes induced
T15141 192-195 Protein denotes Tat
R12114 T15135 T15136 themeOf MIP-1α,expression
R12115 T15136 T15137 themeOf expression,increased
R12116 T15138 T15139 themeOf MIP-1α,production
R12117 T15139 T15140 themeOf production,induced
R12118 T15141 T15140 causeOf Tat,induced

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15907 32-38 P10147 denotes MIP-1α
T15908 131-137 P10147 denotes MIP-1α
T15909 192-195 P04610 denotes Tat
T15910 192-195 Q8UMQ1 denotes Tat
T15911 192-195 P04608 denotes Tat
T15912 192-195 P04605 denotes Tat