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PMC:3333881 / 32-256 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T146 3-12 VB denotes activates
T147 13-18 NN denotes NF-κB
T148 19-22 IN denotes via
T149 23-31 JJ denotes physical
T150 32-43 NN denotes interaction
T151 44-48 IN denotes with
T152 49-54 NN denotes IκB-α
T153 55-58 CC denotes and
T154 59-62 NN denotes p65
T155 74-81 JJ denotes Nuclear
T156 82-88 NN denotes factor
T157 89-90 -LRB- denotes (
T158 90-92 NN denotes NF
T159 92-93 -RRB- denotes )
T160 93-96 NN denotes -κB
T161 97-99 VB denotes is
T162 100-101 DT denotes a
T163 102-108 NN denotes master
T164 109-118 NN denotes regulator
T165 119-121 IN denotes of
T166 122-138 JJ denotes pro-inflammatory
T167 139-144 NN denotes genes
T168 145-148 CC denotes and
T169 149-151 VB denotes is
T170 152-163 VB denotes upregulated
T171 164-166 IN denotes in
T172 167-172 JJ denotes human
T173 173-189 NN denotes immunodeficiency
T174 190-195 NN denotes virus
T175 196-197 CD denotes 1
T176 198-199 -LRB- denotes (
T177 199-204 NN denotes HIV-1
T178 204-205 -RRB- denotes )
T179 206-215 NN denotes infection
R78 T146 T148 arg1Of activates,via
R79 T147 T146 arg2Of NF-κB,activates
R80 T150 T148 arg2Of interaction,via
R81 T150 T149 arg1Of interaction,physical
R82 T150 T151 arg1Of interaction,with
R83 T152 T153 arg1Of IκB-α,and
R84 T153 T151 arg2Of and,with
R85 T154 T153 arg2Of p65,and
R86 T156 T155 arg1Of factor,Nuclear
R87 T156 T157 arg1Of factor,(
R88 T158 T157 arg2Of NF,(
R89 T159 T157 arg3Of ),(
R90 T160 T156 arg1Of -κB,factor
R91 T160 T161 arg1Of -κB,is
R92 T160 T169 arg1Of -κB,is
R93 T160 T170 arg2Of -κB,upregulated
R94 T161 T168 arg1Of is,and
R95 T164 T161 arg2Of regulator,is
R96 T164 T162 arg1Of regulator,a
R97 T164 T163 arg1Of regulator,master
R98 T164 T165 arg1Of regulator,of
R99 T167 T165 arg2Of genes,of
R100 T167 T166 arg1Of genes,pro-inflammatory
R101 T170 T168 arg2Of upregulated,and
R102 T170 T169 arg2Of upregulated,is
R103 T170 T171 arg1Of upregulated,in
R104 T174 T172 arg1Of virus,human
R105 T174 T173 arg1Of virus,immunodeficiency
R106 T174 T175 arg1Of virus,1
R107 T174 T176 arg1Of virus,(
R108 T177 T176 arg2Of HIV-1,(
R109 T178 T176 arg3Of ),(
R110 T179 T171 arg2Of infection,in
R111 T179 T174 arg1Of infection,virus

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T406 3-12 VBZ denotes activates
T407 13-18 NNP denotes NF-κB
T408 19-22 IN denotes via
T409 23-31 JJ denotes physical
T410 32-43 NN denotes interaction
T411 44-48 IN denotes with
T412 49-54 NNP denotes IκB-α
T413 55-58 CC denotes and
T414 59-62 CD denotes p65
T415 74-81 JJ denotes Nuclear
T416 82-88 NN denotes factor
T417 89-90 -LRB- denotes (
T418 90-92 NNP denotes NF
T419 92-93 -RRB- denotes )
T420 93-94 : denotes -
T421 94-96 NN denotes κB
T422 97-99 VBZ denotes is
T423 100-101 DT denotes a
T424 102-108 NN denotes master
T425 109-118 NN denotes regulator
T426 119-121 IN denotes of
T427 122-138 JJ denotes pro-inflammatory
T428 139-144 NNS denotes genes
T429 145-148 CC denotes and
T430 149-151 VBZ denotes is
T431 152-163 VBN denotes upregulated
T432 164-166 IN denotes in
T433 167-172 JJ denotes human
T434 173-189 NN denotes immunodeficiency
T435 190-195 NN denotes virus
T436 196-197 CD denotes 1
T437 198-199 -LRB- denotes (
T438 199-204 NN denotes HIV-1
T439 204-205 -RRB- denotes )
T440 206-215 NN denotes infection
T441 215-216 . denotes .
R297 T406 T422 ccomp activates,is
R298 T407 T406 dobj NF-κB,activates
R299 T408 T406 prep via,activates
R300 T409 T410 amod physical,interaction
R301 T410 T408 pobj interaction,via
R302 T411 T410 prep with,interaction
R303 T412 T411 pobj IκB-α,with
R304 T413 T412 cc and,IκB-α
R305 T414 T416 nummod p65,factor
R306 T415 T416 amod Nuclear,factor
R307 T416 T410 conj factor,interaction
R308 T417 T410 punct (,interaction
R309 T418 T406 npadvmod NF,activates
R310 T419 T418 punct ),NF
R311 T420 T422 punct -,is
R312 T421 T422 nsubj κB,is
R313 T422 T422 ROOT is,is
R314 T423 T425 det a,regulator
R315 T424 T425 compound master,regulator
R316 T425 T422 attr regulator,is
R317 T426 T425 prep of,regulator
R318 T427 T428 amod pro-inflammatory,genes
R319 T428 T426 pobj genes,of
R320 T429 T422 cc and,is
R321 T430 T431 auxpass is,upregulated
R322 T431 T422 conj upregulated,is
R323 T432 T431 prep in,upregulated
R324 T433 T434 amod human,immunodeficiency
R325 T434 T435 compound immunodeficiency,virus
R326 T435 T432 pobj virus,in
R327 T436 T435 nummod 1,virus
R328 T437 T440 punct (,infection
R329 T438 T440 nmod HIV-1,infection
R330 T439 T440 punct ),infection
R331 T440 T435 appos infection,virus
R332 T441 T422 punct .,is

GO-BP

Id Subject Object Predicate Lexical cue
T633 3-18 http://purl.obolibrary.org/obo/GO_0051092 denotes activates NF-κB

sentences

Id Subject Object Predicate Lexical cue
T90 74-216 Sentence denotes Nuclear factor (NF)-κB is a master regulator of pro-inflammatory genes and is upregulated in human immunodeficiency virus 1 (HIV-1) infection.
T2 65-73 Sentence denotes Abstract
T3 74-216 Sentence denotes Nuclear factor (NF)-κB is a master regulator of pro-inflammatory genes and is upregulated in human immunodeficiency virus 1 (HIV-1) infection.

ICD10

Id Subject Object Predicate Lexical cue
T639 173-189 http://purl.bioontology.org/ontology/ICD10/D84.9 denotes immunodeficiency

events-check-again

Id Subject Object Predicate Lexical cue
T859 32-43 Binding denotes interaction
T860 49-54 Protein denotes IκB-α
T861 59-62 Protein denotes p65
R742 T860 T859 themeOf IκB-α,interaction

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T904 13-18 Protein denotes NF-κB
T905 49-54 Protein denotes IκB-α
T906 3-12 Positive_regulation denotes activates
T907 32-43 Binding denotes interaction
T908 3-12 Positive_regulation denotes activates
T909 94-96 Protein denotes κB
T910 152-163 Positive_regulation denotes upregulated
R633 T904 T906 themeOf NF-κB,activates
R634 T905 T907 themeOf IκB-α,interaction
R635 T907 T908 themeOf interaction,activates
R636 T909 T910 themeOf κB,upregulated

test2

Id Subject Object Predicate Lexical cue
T47 32-43 Binding denotes interaction
T48 49-54 Protein denotes IκB-α
T49 59-62 Protein denotes p65
R655 T48 T47 themeOf IκB-α,interaction

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T97 32-43 Binding denotes interaction
T127 49-54 Protein denotes IκB-α
T133 59-62 Protein denotes p65
R61 T127 T97 themeOf IκB-α,interaction

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T362 59-62 P21579 denotes p65
T363 59-62 Q04206 denotes p65