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PMC:3333881 / 30145-30300 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15237 0-3 NN denotes Tat
T15238 4-13 VB denotes activates
T15239 14-17 DT denotes the
T15240 18-31 JJ denotes p65-dependent
T15241 32-42 NN denotes expression
T15242 43-45 IN denotes of
T15243 46-62 JJ denotes NF-κB-responsive
T15244 63-68 NN denotes genes
T15245 68-69 -COMMA- denotes ,
T15246 70-78 VB denotes occupies
T15247 79-82 DT denotes the
T15248 83-88 NN denotes NF-κB
T15249 89-98 NN denotes enhancers
T15250 99-102 CC denotes and
T15251 103-111 VB denotes promotes
T15252 112-115 DT denotes the
T15253 116-119 NN denotes p65
T15254 120-131 NN denotes recruitment
T15255 132-136 IN denotes with
T15256 137-142 NN denotes IκB-α
T15257 143-155 NN denotes displacement
R12187 T15237 T15238 arg1Of Tat,activates
R12188 T15237 T15246 arg1Of Tat,occupies
R12189 T15237 T15251 arg1Of Tat,promotes
R12190 T15238 T15245 arg1Of activates,","
R12191 T15241 T15238 arg2Of expression,activates
R12192 T15241 T15239 arg1Of expression,the
R12193 T15241 T15240 arg1Of expression,p65-dependent
R12194 T15241 T15242 arg1Of expression,of
R12195 T15244 T15242 arg2Of genes,of
R12196 T15244 T15243 arg1Of genes,NF-κB-responsive
R12197 T15245 T15250 arg1Of ",",and
R12198 T15246 T15245 arg2Of occupies,","
R12199 T15249 T15246 arg2Of enhancers,occupies
R12200 T15249 T15247 arg1Of enhancers,the
R12201 T15249 T15248 arg1Of enhancers,NF-κB
R12202 T15251 T15250 arg2Of promotes,and
R12203 T15254 T15251 arg2Of recruitment,promotes
R12204 T15254 T15252 arg1Of recruitment,the
R12205 T15254 T15253 arg1Of recruitment,p65
R12206 T15254 T15255 arg1Of recruitment,with
R12207 T15257 T15255 arg2Of displacement,with
R12208 T15257 T15256 arg1Of displacement,IκB-α

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15998 0-3 NNP denotes Tat
T15999 4-13 VBZ denotes activates
T16000 14-17 DT denotes the
T16001 18-31 JJ denotes p65-dependent
T16002 32-42 NN denotes expression
T16003 43-45 IN denotes of
T16004 46-62 JJ denotes NF-κB-responsive
T16005 63-68 NNS denotes genes
T16006 68-69 , denotes ,
T16007 70-78 VBZ denotes occupies
T16008 79-82 DT denotes the
T16009 83-88 JJ denotes NF-κB
T16010 89-98 NNS denotes enhancers
T16011 99-102 CC denotes and
T16012 103-111 VBZ denotes promotes
T16013 112-115 DT denotes the
T16014 116-119 CD denotes p65
T16015 120-131 NN denotes recruitment
T16016 132-136 IN denotes with
T16017 137-142 JJ denotes IκB-α
T16018 143-155 NN denotes displacement
R12788 T15998 T15999 nsubj Tat,activates
R12789 T15999 T15999 ROOT activates,activates
R12790 T16000 T16002 det the,expression
R12791 T16001 T16002 amod p65-dependent,expression
R12792 T16002 T15999 dobj expression,activates
R12793 T16003 T16002 prep of,expression
R12794 T16004 T16005 amod NF-κB-responsive,genes
R12795 T16005 T16003 pobj genes,of
R12796 T16006 T15999 punct ",",activates
R12797 T16007 T15999 conj occupies,activates
R12798 T16008 T16010 det the,enhancers
R12799 T16009 T16010 amod NF-κB,enhancers
R12800 T16010 T16007 dobj enhancers,occupies
R12801 T16011 T16007 cc and,occupies
R12802 T16012 T16007 conj promotes,occupies
R12803 T16013 T16015 det the,recruitment
R12804 T16014 T16015 nummod p65,recruitment
R12805 T16015 T16012 dobj recruitment,promotes
R12806 T16016 T16012 prep with,promotes
R12807 T16017 T16018 amod IκB-α,displacement
R12808 T16018 T16016 pobj displacement,with

sentences

Id Subject Object Predicate Lexical cue
T15219 0-155 Sentence denotes Tat activates the p65-dependent expression of NF-κB-responsive genes, occupies the NF-κB enhancers and promotes the p65 recruitment with IκB-α displacement
T182 0-155 Sentence denotes Tat activates the p65-dependent expression of NF-κB-responsive genes, occupies the NF-κB enhancers and promotes the p65 recruitment with IκB-α displacement

events-check-again

Id Subject Object Predicate Lexical cue Negation
T17262 0-3 Protein denotes Tat
T17263 18-21 Protein denotes p65
T17264 70-78 Binding denotes occupies
T17265 103-111 Positive_regulation denotes promotes
T17266 103-111 Positive_regulation denotes promotes
T17267 116-119 Protein denotes p65
T17268 120-131 Binding denotes recruitment
T17269 137-142 Protein denotes IκB-α
T17270 143-155 Binding denotes displacement true
R13884 T17262 T17266 causeOf Tat,promotes
R13885 T17262 T17265 causeOf Tat,promotes
R13886 T17262 T17264 themeOf Tat,occupies
R13887 T17267 T17268 themeOf p65,recruitment
R13888 T17267 T17270 themeOf p65,displacement
R13889 T17268 T17266 themeOf recruitment,promotes
R13890 T17269 T17270 themeOf IκB-α,displacement
R13891 T17270 T17265 themeOf displacement,promotes

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T17402 0-3 Protein denotes Tat
T17403 18-21 Protein denotes p65
T17404 46-51 Protein denotes NF-κB
T17405 83-98 Protein denotes NF-κB enhancers
T17406 116-119 Protein denotes p65
T17407 137-155 Protein denotes IκB-α displacement
T17408 120-131 Binding denotes recruitment
T17409 103-111 Positive_regulation denotes promotes
R14004 T17406 T17408 themeOf p65,recruitment
R14005 T17407 T17408 themeOf IκB-α displacement,recruitment
R14006 T17408 T17409 themeOf recruitment,promotes

test2

Id Subject Object Predicate Lexical cue Negation
T14963 0-3 Protein denotes Tat
T14964 18-21 Protein denotes p65
T14965 70-78 Binding denotes occupies
T14966 103-111 Positive_regulation denotes promotes
T14967 116-119 Protein denotes p65 true
T14968 120-131 Binding denotes recruitment
T14969 137-142 Protein denotes IκB-α
T14970 143-155 Binding denotes displacement
R12000 T14963 T14965 themeOf Tat,occupies
R12001 T14963 T14966 causeOf Tat,promotes
R12002 T14967 T14970 themeOf p65,displacement
R12003 T14967 T14968 themeOf p65,recruitment
R12004 T14968 T14966 themeOf recruitment,promotes
R12005 T14969 T14970 themeOf IκB-α,displacement
R12006 T14970 T14966 themeOf displacement,promotes

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T15079 0-3 Protein denotes Tat
T15080 18-21 Protein denotes p65
T15081 70-78 Binding denotes occupies
T15082 103-111 Positive_regulation denotes promotes
T15083 103-111 Positive_regulation denotes promotes
T15084 116-119 Protein denotes p65
T15085 120-131 Binding denotes recruitment
T15086 137-142 Protein denotes IκB-α
T15087 143-155 Binding denotes displacement true
R12067 T15079 T15083 causeOf Tat,promotes
R12068 T15079 T15082 causeOf Tat,promotes
R12070 T15084 T15085 themeOf p65,recruitment
R12071 T15084 T15087 themeOf p65,displacement
R12072 T15085 T15083 themeOf recruitment,promotes
R12073 T15086 T15087 themeOf IκB-α,displacement
R12074 T15087 T15082 themeOf displacement,promotes
R12069 T15079 T15081 themeOf Tat,occupies

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15833 0-3 P04605 denotes Tat
T15834 0-3 P04610 denotes Tat
T15835 0-3 Q8UMQ1 denotes Tat
T15836 0-3 P04608 denotes Tat
T15837 18-21 Q04206 denotes p65
T15838 18-21 P21579 denotes p65
T15839 116-119 Q04206 denotes p65
T15840 116-119 P21579 denotes p65