PMC:3333881 / 30145-30300
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15237 | 0-3 | NN | denotes | Tat |
T15238 | 4-13 | VB | denotes | activates |
T15239 | 14-17 | DT | denotes | the |
T15240 | 18-31 | JJ | denotes | p65-dependent |
T15241 | 32-42 | NN | denotes | expression |
T15242 | 43-45 | IN | denotes | of |
T15243 | 46-62 | JJ | denotes | NF-κB-responsive |
T15244 | 63-68 | NN | denotes | genes |
T15245 | 68-69 | -COMMA- | denotes | , |
T15246 | 70-78 | VB | denotes | occupies |
T15247 | 79-82 | DT | denotes | the |
T15248 | 83-88 | NN | denotes | NF-κB |
T15249 | 89-98 | NN | denotes | enhancers |
T15250 | 99-102 | CC | denotes | and |
T15251 | 103-111 | VB | denotes | promotes |
T15252 | 112-115 | DT | denotes | the |
T15253 | 116-119 | NN | denotes | p65 |
T15254 | 120-131 | NN | denotes | recruitment |
T15255 | 132-136 | IN | denotes | with |
T15256 | 137-142 | NN | denotes | IκB-α |
T15257 | 143-155 | NN | denotes | displacement |
R12187 | T15237 | T15238 | arg1Of | Tat,activates |
R12188 | T15237 | T15246 | arg1Of | Tat,occupies |
R12189 | T15237 | T15251 | arg1Of | Tat,promotes |
R12190 | T15238 | T15245 | arg1Of | activates,"," |
R12191 | T15241 | T15238 | arg2Of | expression,activates |
R12192 | T15241 | T15239 | arg1Of | expression,the |
R12193 | T15241 | T15240 | arg1Of | expression,p65-dependent |
R12194 | T15241 | T15242 | arg1Of | expression,of |
R12195 | T15244 | T15242 | arg2Of | genes,of |
R12196 | T15244 | T15243 | arg1Of | genes,NF-κB-responsive |
R12197 | T15245 | T15250 | arg1Of | ",",and |
R12198 | T15246 | T15245 | arg2Of | occupies,"," |
R12199 | T15249 | T15246 | arg2Of | enhancers,occupies |
R12200 | T15249 | T15247 | arg1Of | enhancers,the |
R12201 | T15249 | T15248 | arg1Of | enhancers,NF-κB |
R12202 | T15251 | T15250 | arg2Of | promotes,and |
R12203 | T15254 | T15251 | arg2Of | recruitment,promotes |
R12204 | T15254 | T15252 | arg1Of | recruitment,the |
R12205 | T15254 | T15253 | arg1Of | recruitment,p65 |
R12206 | T15254 | T15255 | arg1Of | recruitment,with |
R12207 | T15257 | T15255 | arg2Of | displacement,with |
R12208 | T15257 | T15256 | arg1Of | displacement,IκB-α |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15998 | 0-3 | NNP | denotes | Tat |
T15999 | 4-13 | VBZ | denotes | activates |
T16000 | 14-17 | DT | denotes | the |
T16001 | 18-31 | JJ | denotes | p65-dependent |
T16002 | 32-42 | NN | denotes | expression |
T16003 | 43-45 | IN | denotes | of |
T16004 | 46-62 | JJ | denotes | NF-κB-responsive |
T16005 | 63-68 | NNS | denotes | genes |
T16006 | 68-69 | , | denotes | , |
T16007 | 70-78 | VBZ | denotes | occupies |
T16008 | 79-82 | DT | denotes | the |
T16009 | 83-88 | JJ | denotes | NF-κB |
T16010 | 89-98 | NNS | denotes | enhancers |
T16011 | 99-102 | CC | denotes | and |
T16012 | 103-111 | VBZ | denotes | promotes |
T16013 | 112-115 | DT | denotes | the |
T16014 | 116-119 | CD | denotes | p65 |
T16015 | 120-131 | NN | denotes | recruitment |
T16016 | 132-136 | IN | denotes | with |
T16017 | 137-142 | JJ | denotes | IκB-α |
T16018 | 143-155 | NN | denotes | displacement |
R12788 | T15998 | T15999 | nsubj | Tat,activates |
R12789 | T15999 | T15999 | ROOT | activates,activates |
R12790 | T16000 | T16002 | det | the,expression |
R12791 | T16001 | T16002 | amod | p65-dependent,expression |
R12792 | T16002 | T15999 | dobj | expression,activates |
R12793 | T16003 | T16002 | prep | of,expression |
R12794 | T16004 | T16005 | amod | NF-κB-responsive,genes |
R12795 | T16005 | T16003 | pobj | genes,of |
R12796 | T16006 | T15999 | punct | ",",activates |
R12797 | T16007 | T15999 | conj | occupies,activates |
R12798 | T16008 | T16010 | det | the,enhancers |
R12799 | T16009 | T16010 | amod | NF-κB,enhancers |
R12800 | T16010 | T16007 | dobj | enhancers,occupies |
R12801 | T16011 | T16007 | cc | and,occupies |
R12802 | T16012 | T16007 | conj | promotes,occupies |
R12803 | T16013 | T16015 | det | the,recruitment |
R12804 | T16014 | T16015 | nummod | p65,recruitment |
R12805 | T16015 | T16012 | dobj | recruitment,promotes |
R12806 | T16016 | T16012 | prep | with,promotes |
R12807 | T16017 | T16018 | amod | IκB-α,displacement |
R12808 | T16018 | T16016 | pobj | displacement,with |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15219 | 0-155 | Sentence | denotes | Tat activates the p65-dependent expression of NF-κB-responsive genes, occupies the NF-κB enhancers and promotes the p65 recruitment with IκB-α displacement |
T182 | 0-155 | Sentence | denotes | Tat activates the p65-dependent expression of NF-κB-responsive genes, occupies the NF-κB enhancers and promotes the p65 recruitment with IκB-α displacement |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T17262 | 0-3 | Protein | denotes | Tat | |
T17263 | 18-21 | Protein | denotes | p65 | |
T17264 | 70-78 | Binding | denotes | occupies | |
T17265 | 103-111 | Positive_regulation | denotes | promotes | |
T17266 | 103-111 | Positive_regulation | denotes | promotes | |
T17267 | 116-119 | Protein | denotes | p65 | |
T17268 | 120-131 | Binding | denotes | recruitment | |
T17269 | 137-142 | Protein | denotes | IκB-α | |
T17270 | 143-155 | Binding | denotes | displacement | true |
R13884 | T17262 | T17266 | causeOf | Tat,promotes | |
R13885 | T17262 | T17265 | causeOf | Tat,promotes | |
R13886 | T17262 | T17264 | themeOf | Tat,occupies | |
R13887 | T17267 | T17268 | themeOf | p65,recruitment | |
R13888 | T17267 | T17270 | themeOf | p65,displacement | |
R13889 | T17268 | T17266 | themeOf | recruitment,promotes | |
R13890 | T17269 | T17270 | themeOf | IκB-α,displacement | |
R13891 | T17270 | T17265 | themeOf | displacement,promotes |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17402 | 0-3 | Protein | denotes | Tat |
T17403 | 18-21 | Protein | denotes | p65 |
T17404 | 46-51 | Protein | denotes | NF-κB |
T17405 | 83-98 | Protein | denotes | NF-κB enhancers |
T17406 | 116-119 | Protein | denotes | p65 |
T17407 | 137-155 | Protein | denotes | IκB-α displacement |
T17408 | 120-131 | Binding | denotes | recruitment |
T17409 | 103-111 | Positive_regulation | denotes | promotes |
R14004 | T17406 | T17408 | themeOf | p65,recruitment |
R14005 | T17407 | T17408 | themeOf | IκB-α displacement,recruitment |
R14006 | T17408 | T17409 | themeOf | recruitment,promotes |
test2
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T14963 | 0-3 | Protein | denotes | Tat | |
T14964 | 18-21 | Protein | denotes | p65 | |
T14965 | 70-78 | Binding | denotes | occupies | |
T14966 | 103-111 | Positive_regulation | denotes | promotes | |
T14967 | 116-119 | Protein | denotes | p65 | true |
T14968 | 120-131 | Binding | denotes | recruitment | |
T14969 | 137-142 | Protein | denotes | IκB-α | |
T14970 | 143-155 | Binding | denotes | displacement | |
R12000 | T14963 | T14965 | themeOf | Tat,occupies | |
R12001 | T14963 | T14966 | causeOf | Tat,promotes | |
R12002 | T14967 | T14970 | themeOf | p65,displacement | |
R12003 | T14967 | T14968 | themeOf | p65,recruitment | |
R12004 | T14968 | T14966 | themeOf | recruitment,promotes | |
R12005 | T14969 | T14970 | themeOf | IκB-α,displacement | |
R12006 | T14970 | T14966 | themeOf | displacement,promotes |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T15079 | 0-3 | Protein | denotes | Tat | |
T15080 | 18-21 | Protein | denotes | p65 | |
T15081 | 70-78 | Binding | denotes | occupies | |
T15082 | 103-111 | Positive_regulation | denotes | promotes | |
T15083 | 103-111 | Positive_regulation | denotes | promotes | |
T15084 | 116-119 | Protein | denotes | p65 | |
T15085 | 120-131 | Binding | denotes | recruitment | |
T15086 | 137-142 | Protein | denotes | IκB-α | |
T15087 | 143-155 | Binding | denotes | displacement | true |
R12067 | T15079 | T15083 | causeOf | Tat,promotes | |
R12068 | T15079 | T15082 | causeOf | Tat,promotes | |
R12070 | T15084 | T15085 | themeOf | p65,recruitment | |
R12071 | T15084 | T15087 | themeOf | p65,displacement | |
R12072 | T15085 | T15083 | themeOf | recruitment,promotes | |
R12073 | T15086 | T15087 | themeOf | IκB-α,displacement | |
R12074 | T15087 | T15082 | themeOf | displacement,promotes | |
R12069 | T15079 | T15081 | themeOf | Tat,occupies |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15833 | 0-3 | P04605 | denotes | Tat |
T15834 | 0-3 | P04610 | denotes | Tat |
T15835 | 0-3 | Q8UMQ1 | denotes | Tat |
T15836 | 0-3 | P04608 | denotes | Tat |
T15837 | 18-21 | Q04206 | denotes | p65 |
T15838 | 18-21 | P21579 | denotes | p65 |
T15839 | 116-119 | Q04206 | denotes | p65 |
T15840 | 116-119 | P21579 | denotes | p65 |