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PMC:3333881 / 26459-26533 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13335 0-3 NN denotes Tat
T13336 4-13 VB denotes increases
T13337 14-17 DT denotes the
T13338 18-21 NN denotes p65
T13339 22-30 NN denotes affinity
T13340 31-38 NN denotes binding
T13341 39-41 TO denotes to
T13342 42-45 NN denotes DNA
T13343 46-53 IN denotes through
T13344 54-65 NN denotes association
T13345 66-70 IN denotes with
T13346 71-74 NN denotes p65
R10763 T13335 T13336 arg1Of Tat,increases
R10764 T13336 T13343 arg1Of increases,through
R10765 T13340 T13336 arg2Of binding,increases
R10766 T13340 T13337 arg1Of binding,the
R10767 T13340 T13338 arg1Of binding,p65
R10768 T13340 T13339 arg1Of binding,affinity
R10769 T13340 T13341 arg1Of binding,to
R10770 T13342 T13341 arg2Of DNA,to
R10772 T13344 T13343 arg2Of association,through
R10773 T13346 T13345 arg2Of p65,with
R10771 T13344 T13345 arg1Of association,with

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13857 0-3 NNP denotes Tat
T13858 4-13 VBZ denotes increases
T13859 14-17 DT denotes the
T13860 18-21 CD denotes p65
T13861 22-30 NN denotes affinity
T13862 31-38 JJ denotes binding
T13863 39-41 TO denotes to
T13864 42-45 NNP denotes DNA
T13865 46-53 IN denotes through
T13866 54-65 NN denotes association
T13867 66-70 IN denotes with
T13868 71-74 CD denotes p65
R11150 T13857 T13858 nsubj Tat,increases
R11151 T13858 T13858 ROOT increases,increases
R11152 T13859 T13861 det the,affinity
R11153 T13860 T13861 nummod p65,affinity
R11154 T13861 T13858 dobj affinity,increases
R11155 T13862 T13861 amod binding,affinity
R11156 T13863 T13862 prep to,binding
R11157 T13864 T13863 pobj DNA,to
R11158 T13865 T13858 prep through,increases
R11159 T13866 T13865 pobj association,through
R11160 T13867 T13858 prep with,increases
R11161 T13868 T13867 pobj p65,with

GO-MF

Id Subject Object Predicate Lexical cue
T14265 31-38 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T14275 31-45 http://purl.obolibrary.org/obo/GO_0003677 denotes binding to DNA

sentences

Id Subject Object Predicate Lexical cue
T13324 0-74 Sentence denotes Tat increases the p65 affinity binding to DNA through association with p65
T165 0-74 Sentence denotes Tat increases the p65 affinity binding to DNA through association with p65

events-check-again

Id Subject Object Predicate Lexical cue
T14678 0-3 Protein denotes Tat
T14679 4-13 Positive_regulation denotes increases
T14680 18-21 Protein denotes p65
T14681 31-38 Binding denotes binding
T14682 54-65 Binding denotes association
T14683 71-74 Protein denotes p65
R11791 T14678 T14682 themeOf Tat,association
R11792 T14680 T14681 themeOf p65,binding
R11793 T14681 T14679 themeOf binding,increases
R11794 T14682 T14679 causeOf association,increases
R11795 T14683 T14682 themeOf p65,association

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T14760 0-3 Protein denotes Tat
T14761 18-21 Protein denotes p65
T14762 31-38 Binding denotes binding
T14763 4-13 Positive_regulation denotes increases
R11844 T14760 T14763 causeOf Tat,increases
R11845 T14761 T14762 themeOf p65,binding
R11846 T14762 T14763 themeOf binding,increases

test2

Id Subject Object Predicate Lexical cue Speculation
T13162 0-3 Protein denotes Tat
T13163 4-13 Positive_regulation denotes increases
T13164 18-21 Protein denotes p65
T13165 31-38 Binding denotes binding true
T13166 54-65 Binding denotes association
T13167 71-74 Protein denotes p65
R10655 T13162 T13163 causeOf Tat,increases
R10656 T13162 T13166 themeOf Tat,association
R10657 T13164 T13165 themeOf p65,binding
R10658 T13165 T13163 themeOf binding,increases
R10659 T13166 T13163 causeOf association,increases
R10660 T13167 T13166 themeOf p65,association

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T13242 0-3 Protein denotes Tat
T13243 4-13 Positive_regulation denotes increases
T13244 18-21 Protein denotes p65
T13245 31-38 Binding denotes binding
T13246 54-65 Binding denotes association
T13247 71-74 Protein denotes p65
R10710 T13242 T13246 themeOf Tat,association
R10711 T13244 T13245 themeOf p65,binding
R10712 T13245 T13243 themeOf binding,increases
R10713 T13246 T13243 causeOf association,increases
R10714 T13247 T13246 themeOf p65,association

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13723 0-3 P04610 denotes Tat
T13724 0-3 Q8UMQ1 denotes Tat
T13725 0-3 P04605 denotes Tat
T13726 0-3 P04608 denotes Tat
T13727 18-21 P21579 denotes p65
T13728 18-21 Q04206 denotes p65
T13729 71-74 Q04206 denotes p65
T13730 71-74 P21579 denotes p65