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PMC:3333881 / 24289-24475 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T25381 0-12 NN denotes Densitometry
T25382 13-19 NN denotes values
T25383 20-21 -LRB- denotes (
T25384 21-22 NN denotes D
T25385 22-23 -RRB- denotes )
T25386 24-26 IN denotes of
T25387 27-30 DT denotes the
T25388 31-36 NN denotes bands
T25389 37-41 VB denotes were
T25390 42-51 VB denotes expressed
T25391 52-54 IN denotes as
T25392 55-59 JJ denotes fold
T25393 60-68 NN denotes increase
T25394 69-74 IN denotes above
T25395 75-78 DT denotes the
T25396 79-86 NN denotes control
T25397 87-88 -LRB- denotes (
T25398 88-92 NN denotes lane
T25399 93-94 CD denotes 1
T25400 94-95 -RRB- denotes )
T25401 95-96 -LRB- denotes .
T25402 97-98 NN denotes (
T25403 98-99 -RRB- denotes D
T25404 99-102 DT denotes ) T
T25405 102-105 NN denotes he
T25406 105-108 NN denotes p65
T25407 109-116 NN denotes DNA bin
T25408 116-124 NN denotes ding act
T25409 124-127 VB denotes ivi
T25410 127-135 VB denotes ty was a
T25411 135-137 IN denotes na
T25412 137-141 NN denotes lyse
T25413 141-146 VB denotes d by
T25414 146-148 FW denotes EM
T25415 148-153 FW denotes SA us
T25416 153-163 VB denotes ing in vit
T25417 163-171 NN denotes ro trans
R20211 T25382 T25381 arg1Of values,Densitometry
R20212 T25382 T25383 arg1Of values,(
R20213 T25382 T25386 arg1Of values,of
R20214 T25382 T25389 arg1Of values,were
R20215 T25382 T25390 arg2Of values,expressed
R20216 T25384 T25383 arg2Of D,(
R20217 T25385 T25383 arg3Of ),(
R20218 T25388 T25386 arg2Of bands,of
R20219 T25388 T25387 arg1Of bands,the
R20220 T25390 T25389 arg2Of expressed,were
R20221 T25390 T25391 arg1Of expressed,as
R20222 T25393 T25391 arg2Of increase,as
R20223 T25393 T25392 arg1Of increase,fold
R20224 T25393 T25394 arg1Of increase,above
R20225 T25393 T25401 arg1Of increase,.
R20226 T25396 T25394 arg2Of control,above
R20227 T25396 T25395 arg1Of control,the
R20228 T25396 T25397 arg1Of control,(
R20229 T25398 T25397 arg2Of lane,(
R20230 T25398 T25399 arg1Of lane,1
R20231 T25400 T25397 arg3Of ),(
R20232 T25402 T25401 arg2Of (,.
R20233 T25403 T25401 arg3Of D,.
R20234 T25408 T25404 arg1Of ding act,) T
R20235 T25408 T25405 arg1Of ding act,he
R20236 T25408 T25406 arg1Of ding act,p65
R20237 T25408 T25407 arg1Of ding act,DNA bin
R20238 T25408 T25409 arg1Of ding act,ivi
R20239 T25408 T25410 arg2Of ding act,ty was a
R20240 T25410 T25389 modOf ty was a,were
R20241 T25410 T25409 arg2Of ty was a,ivi
R20242 T25412 T25410 arg1Of lyse,ty was a
R20243 T25412 T25411 arg2Of lyse,na
R20244 T25412 T25413 arg1Of lyse,d by
R20245 T25415 T25414 arg1Of SA us,EM
R20246 T25417 T25413 arg2Of ro trans,d by
R20247 T25417 T25415 arg1Of ro trans,SA us
R20248 T25417 T25416 arg2Of ro trans,ing in vit

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T25859 0-12 NNP denotes Densitometry
T25860 13-19 NNS denotes values
T25861 20-21 -LRB- denotes (
T25862 21-22 NNP denotes D
T25863 22-23 -RRB- denotes )
T25864 24-26 IN denotes of
T25865 27-30 DT denotes the
T25866 31-36 NNS denotes bands
T25867 37-41 VBD denotes were
T25868 42-51 VBN denotes expressed
T25869 52-54 IN denotes as
T25870 55-59 VBP denotes fold
T25871 60-68 NN denotes increase
T25872 69-74 IN denotes above
T25873 75-78 DT denotes the
T25874 79-86 NN denotes control
T25875 87-88 -LRB- denotes (
T25876 88-92 NN denotes lane
T25877 93-94 CD denotes 1
T25878 94-95 -RRB- denotes )
T25879 95-96 . denotes .
T25880 97-98 -LRB- denotes (
T25881 98-99 NNP denotes D
T25882 99-100 -RRB- denotes )
T25883 101-104 DT denotes The
T25884 105-108 CD denotes p65
T25885 109-112 NNP denotes DNA
T25886 113-120 JJ denotes binding
T25887 121-129 NN denotes activity
T25888 130-133 VBD denotes was
T25889 134-142 VBN denotes analysed
T25890 143-145 IN denotes by
T25891 146-150 NNP denotes EMSA
T25892 151-156 VBG denotes using
T25893 157-159 IN denotes in
T25894 160-165 NN denotes vitro
T25895 166-176 VBN denotes translated
T25896 177-185 NNS denotes proteins
T25897 185-186 . denotes .
R20614 T25859 T25860 compound Densitometry,values
R20615 T25860 T25868 nsubjpass values,expressed
R20616 T25861 T25862 punct (,D
R20617 T25862 T25860 appos D,values
R20618 T25863 T25860 punct ),values
R20619 T25864 T25860 prep of,values
R20620 T25865 T25866 det the,bands
R20621 T25866 T25864 pobj bands,of
R20622 T25867 T25868 auxpass were,expressed
R20623 T25868 T25868 ROOT expressed,expressed
R20624 T25869 T25870 mark as,fold
R20625 T25870 T25868 advcl fold,expressed
R20626 T25871 T25870 dobj increase,fold
R20627 T25872 T25870 prep above,fold
R20628 T25873 T25874 det the,control
R20629 T25874 T25872 pobj control,above
R20630 T25875 T25874 punct (,control
R20631 T25876 T25874 appos lane,control
R20632 T25877 T25876 nummod 1,lane
R20633 T25878 T25874 punct ),control
R20634 T25879 T25868 punct .,expressed
R20635 T25880 T25881 punct (,D
R20636 T25881 T25881 ROOT D,D
R20637 T25882 T25881 punct ),D
R20638 T25883 T25885 det The,DNA
R20639 T25884 T25885 nummod p65,DNA
R20640 T25885 T25887 compound DNA,activity
R20641 T25886 T25887 amod binding,activity
R20642 T25887 T25889 nsubjpass activity,analysed
R20643 T25888 T25889 auxpass was,analysed
R20644 T25889 T25889 ROOT analysed,analysed
R20645 T25890 T25889 agent by,analysed
R20646 T25891 T25890 pobj EMSA,by
R20647 T25892 T25889 advcl using,analysed
R20648 T25893 T25892 prt in,using
R20649 T25894 T25896 amod vitro,proteins
R20650 T25895 T25896 amod translated,proteins
R20651 T25896 T25893 pobj proteins,in
R20652 T25897 T25889 punct .,analysed

GO-BP

Id Subject Object Predicate Lexical cue
T26110 166-185 http://purl.obolibrary.org/obo/GO_0006412 denotes translated proteins

GO-MF

Id Subject Object Predicate Lexical cue
T26127 109-120 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T26129 113-120 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T25207 0-186 Sentence denotes Densitometry values (D) of the bands were expressed as fold increase above the control (lane 1). (D) The p65 DNA binding activity was analysed by EMSA using in vitro translated proteins.
T153 0-186 Sentence denotes Densitometry values (D) of the bands were expressed as fold increase above the control (lane 1). (D) The p65 DNA binding activity was analysed by EMSA using in vitro translated proteins.

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T26352 105-108 Protein denotes p65
T26353 113-120 Binding denotes binding true
R20900 T26352 T26353 themeOf p65,binding

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T26390 105-112 Protein denotes p65 DNA
T26391 113-120 Binding denotes binding
R20907 T26390 T26391 themeOf p65 DNA,binding

test2

Id Subject Object Predicate Lexical cue
T25151 105-108 Protein denotes p65
T25152 113-120 Binding denotes binding
R20020 T25151 T25152 themeOf p65,binding

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T25187 105-108 Protein denotes p65
T25188 113-120 Binding denotes binding true
R20029 T25187 T25188 themeOf p65,binding

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T25638 105-108 Q04206 denotes p65
T25639 105-108 P21579 denotes p65