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PMC:3333881 / 21968-22195 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9265 0-2 TO denotes To
T9266 3-7 DT denotes this
T9267 8-11 NN denotes end
T9268 11-12 -COMMA- denotes ,
T9269 13-16 DT denotes the
T9270 17-28 NN denotes association
T9271 29-31 IN denotes of
T9272 32-37 NN denotes IκB-α
T9273 38-42 IN denotes with
T9274 43-46 NN denotes p65
T9275 47-50 VB denotes was
T9276 51-59 VB denotes analysed
T9277 60-62 FW denotes in
T9278 63-67 FW denotes vivo
T9279 68-70 IN denotes at
T9280 71-72 CD denotes 0
T9281 73-76 CC denotes and
T9282 77-84 NN denotes 240 min
T9283 85-90 IN denotes after
T9284 91-102 JJ denotes short-pulse
T9285 103-106 NN denotes PMA
T9286 106-107 -COMMA- denotes ,
T9287 108-113 WDT denotes which
T9288 114-126 VB denotes corresponded
T9289 127-129 TO denotes to
T9290 130-133 DT denotes the
T9291 134-138 NN denotes time
T9292 139-141 IN denotes of
T9293 142-155 JJ denotes un-stimulated
T9294 156-165 NN denotes condition
T9295 166-169 CC denotes and
T9296 170-185 JJ denotes post-activation
T9297 186-188 FW denotes de
T9298 189-193 FW denotes novo
T9299 194-203 NN denotes synthesis
T9300 204-206 IN denotes of
T9301 207-212 NN denotes IκB-α
T9302 212-213 -COMMA- denotes ,
T9303 214-226 RB denotes respectively
R7770 T9267 T9265 arg2Of end,To
R7771 T9267 T9266 arg1Of end,this
R7772 T9270 T9269 arg1Of association,the
R7773 T9270 T9271 arg1Of association,of
R7774 T9270 T9273 arg1Of association,with
R7775 T9270 T9275 arg1Of association,was
R7776 T9270 T9276 arg2Of association,analysed
R7777 T9272 T9271 arg2Of IκB-α,of
R7778 T9274 T9273 arg2Of p65,with
R7779 T9276 T9265 arg1Of analysed,To
R7780 T9276 T9268 arg1Of analysed,","
R7781 T9276 T9275 arg2Of analysed,was
R7782 T9276 T9278 arg1Of analysed,vivo
R7783 T9276 T9279 arg1Of analysed,at
R7784 T9276 T9283 arg1Of analysed,after
R7785 T9278 T9277 arg1Of vivo,in
R7786 T9280 T9281 arg1Of 0,and
R7787 T9281 T9279 arg2Of and,at
R7788 T9282 T9281 arg2Of 240 min,and
R7789 T9285 T9283 arg2Of PMA,after
R7790 T9285 T9284 arg1Of PMA,short-pulse
R7791 T9285 T9286 arg1Of PMA,","
R7792 T9285 T9287 arg1Of PMA,which
R7793 T9285 T9288 arg1Of PMA,corresponded
R7794 T9288 T9289 arg1Of corresponded,to
R7795 T9288 T9302 arg1Of corresponded,","
R7796 T9288 T9303 arg1Of corresponded,respectively
R7797 T9291 T9289 arg2Of time,to
R7798 T9291 T9290 arg1Of time,the
R7799 T9291 T9292 arg1Of time,of
R7800 T9294 T9293 arg1Of condition,un-stimulated
R7801 T9294 T9295 arg1Of condition,and
R7802 T9295 T9292 arg2Of and,of
R7803 T9298 T9297 arg1Of novo,de
R7804 T9299 T9295 arg2Of synthesis,and
R7805 T9299 T9296 arg1Of synthesis,post-activation
R7806 T9299 T9298 arg1Of synthesis,novo
R7807 T9299 T9300 arg1Of synthesis,of
R7808 T9301 T9300 arg2Of IκB-α,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T10286 0-2 TO denotes To
T10287 3-7 DT denotes this
T10288 8-11 NN denotes end
T10289 11-12 , denotes ,
T10290 13-16 DT denotes the
T10291 17-28 NN denotes association
T10292 29-31 IN denotes of
T10293 32-37 JJ denotes IκB-α
T10294 38-42 IN denotes with
T10295 43-46 CD denotes p65
T10296 47-50 VBD denotes was
T10297 51-59 VBN denotes analysed
T10298 60-62 IN denotes in
T10299 63-67 NN denotes vivo
T10300 68-70 IN denotes at
T10301 71-72 CD denotes 0
T10302 73-76 CC denotes and
T10303 77-80 CD denotes 240
T10304 81-84 NN denotes min
T10305 85-90 IN denotes after
T10306 91-102 JJ denotes short-pulse
T10307 103-106 NNP denotes PMA
T10308 106-107 , denotes ,
T10309 108-113 WDT denotes which
T10310 114-126 VBD denotes corresponded
T10311 127-129 TO denotes to
T10312 130-133 DT denotes the
T10313 134-138 NN denotes time
T10314 139-141 IN denotes of
T10315 142-155 JJ denotes un-stimulated
T10316 156-165 NN denotes condition
T10317 166-169 CC denotes and
T10318 170-185 NN denotes post-activation
T10319 186-188 IN denotes de
T10320 189-193 NN denotes novo
T10321 194-203 NN denotes synthesis
T10322 204-206 IN denotes of
T10323 207-212 NNP denotes IκB-α
T10324 212-213 , denotes ,
T10325 214-226 RB denotes respectively
T10326 226-227 . denotes .
R8549 T10286 T10297 prep To,analysed
R8550 T10287 T10288 det this,end
R8552 T10288 T10286 pobj end,To
R8553 T10289 T10297 punct ",",analysed
R8554 T10290 T10291 det the,association
R8556 T10291 T10297 nsubjpass association,analysed
R8557 T10292 T10291 prep of,association
R8558 T10293 T10292 pobj IκB-α,of
R8560 T10294 T10291 prep with,association
R8561 T10295 T10294 pobj p65,with
R8562 T10296 T10297 auxpass was,analysed
R8564 T10297 T10297 ROOT analysed,analysed
R8565 T10298 T10297 prep in,analysed
R8566 T10299 T10298 pobj vivo,in
R8568 T10300 T10297 prep at,analysed
R8569 T10301 T10304 nummod 0,min
R8571 T10302 T10301 cc and,0
R8572 T10303 T10301 conj 240,0
R8574 T10304 T10300 pobj min,at
R8576 T10305 T10304 prep after,min
R8577 T10306 T10307 amod short-pulse,PMA
R8579 T10307 T10305 pobj PMA,after
R8580 T10308 T10307 punct ",",PMA
R8581 T10309 T10310 nsubj which,corresponded
R8582 T10310 T10307 relcl corresponded,PMA
R8583 T10311 T10310 prep to,corresponded
R8584 T10312 T10313 det the,time
R8586 T10313 T10311 pobj time,to
R8587 T10314 T10313 prep of,time
R8588 T10315 T10316 amod un-stimulated,condition
R8590 T10316 T10314 pobj condition,of
R8591 T10317 T10316 cc and,condition
R8592 T10318 T10316 conj post-activation,condition
R8594 T10319 T10321 nmod de,synthesis
R8595 T10320 T10321 amod novo,synthesis
R8597 T10321 T10316 conj synthesis,condition
R8599 T10322 T10321 prep of,synthesis
R8600 T10323 T10322 pobj IκB-α,of
R8602 T10324 T10307 punct ",",PMA
R8603 T10325 T10297 advmod respectively,analysed
R8605 T10326 T10297 punct .,analysed

GO-BP

Id Subject Object Predicate Lexical cue
T10424 194-203 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T10430 186-203 http://purl.obolibrary.org/obo/GO_0006189 denotes de novo synthesis
T10432 186-203 http://purl.obolibrary.org/obo/GO_0097294 denotes de novo synthesis

sentences

Id Subject Object Predicate Lexical cue
T8552 0-227 Sentence denotes To this end, the association of IκB-α with p65 was analysed in vivo at 0 and 240 min after short-pulse PMA, which corresponded to the time of un-stimulated condition and post-activation de novo synthesis of IκB-α, respectively.
T140 0-227 Sentence denotes To this end, the association of IκB-α with p65 was analysed in vivo at 0 and 240 min after short-pulse PMA, which corresponded to the time of un-stimulated condition and post-activation de novo synthesis of IκB-α, respectively.

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T11158 17-28 Binding denotes association true
T11159 32-37 Protein denotes IκB-α
T11160 43-46 Protein denotes p65
T11161 194-203 Gene_expression denotes synthesis
T11162 207-212 Protein denotes IκB-α
R9147 T11159 T11158 themeOf IκB-α,association
R9148 T11160 T11158 themeOf p65,association
R9150 T11162 T11161 themeOf IκB-α,synthesis

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T11304 32-37 Protein denotes IκB-α
T11305 43-46 Protein denotes p65
T11306 207-212 Protein denotes IκB-α
T11307 17-28 Binding denotes association
T11308 194-203 Gene_expression denotes synthesis
R9243 T11304 T11307 themeOf IκB-α,association
R9244 T11305 T11307 themeOf p65,association
R9245 T11306 T11308 themeOf IκB-α,synthesis

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T8513 17-28 Binding denotes association true
T8514 32-37 Protein denotes IκB-α
T8515 43-46 Protein denotes p65
T8516 194-203 Gene_expression denotes synthesis
T8517 207-212 Protein denotes IκB-α
R7029 T8514 T8513 themeOf IκB-α,association
R7030 T8515 T8513 themeOf p65,association
R7031 T8517 T8516 themeOf IκB-α,synthesis

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T9510 43-46 P21579 denotes p65
T9511 43-46 Q04206 denotes p65