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PMC:3333881 / 1994-2248 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1561 0-2 IN denotes In
T1562 3-6 DT denotes the
T1563 7-16 JJ denotes canonical
T1564 17-24 NN denotes pathway
T1565 25-27 IN denotes of
T1566 28-33 NN denotes NF-κB
T1567 34-44 NN denotes activation
T1568 44-45 -COMMA- denotes ,
T1569 46-49 DT denotes the
T1570 50-59 VB denotes activated
T1571 60-63 NN denotes IκB
T1572 64-70 NN denotes kinase
T1573 71-72 -LRB- denotes (
T1574 72-75 NN denotes IKK
T1575 75-76 -RRB- denotes )
T1576 77-91 VB denotes phosphorylates
T1577 92-95 NN denotes IκB
T1578 96-98 IN denotes at
T1579 99-107 JJ denotes specific
T1580 108-114 NN denotes serine
T1581 115-123 NN denotes residues
T1582 124-128 WDT denotes that
T1583 129-135 VB denotes target
T1584 136-139 DT denotes the
T1585 140-147 NN denotes protein
T1586 148-150 TO denotes to
T1587 151-165 NN denotes ubiquitination
T1588 166-169 CC denotes and
T1589 170-181 JJ denotes proteasomal
T1590 182-193 NN denotes degradation
T1591 193-194 -COMMA- denotes ,
T1592 195-200 WDT denotes which
T1593 201-209 VB denotes releases
T1594 210-213 DT denotes the
T1595 214-224 JJ denotes functional
T1596 225-230 NN denotes NF-κB
T1597 231-238 NN denotes complex
T1598 239-241 IN denotes in
T1599 242-245 DT denotes the
T1600 246-253 NN denotes nucleus
R1382 T1564 T1561 arg2Of pathway,In
R1383 T1564 T1562 arg1Of pathway,the
R1384 T1564 T1563 arg1Of pathway,canonical
R1385 T1564 T1565 arg1Of pathway,of
R1386 T1567 T1565 arg2Of activation,of
R1387 T1567 T1566 arg1Of activation,NF-κB
R1388 T1572 T1569 arg1Of kinase,the
R1389 T1572 T1570 arg2Of kinase,activated
R1390 T1572 T1571 arg1Of kinase,IκB
R1391 T1572 T1573 arg1Of kinase,(
R1392 T1572 T1576 arg1Of kinase,phosphorylates
R1393 T1574 T1573 arg2Of IKK,(
R1394 T1575 T1573 arg3Of ),(
R1395 T1576 T1561 arg1Of phosphorylates,In
R1396 T1576 T1568 arg1Of phosphorylates,","
R1397 T1576 T1578 arg1Of phosphorylates,at
R1398 T1577 T1576 arg2Of IκB,phosphorylates
R1399 T1581 T1578 arg2Of residues,at
R1400 T1581 T1579 arg1Of residues,specific
R1401 T1581 T1580 arg1Of residues,serine
R1402 T1581 T1582 arg1Of residues,that
R1403 T1581 T1583 arg1Of residues,target
R1404 T1585 T1583 arg2Of protein,target
R1405 T1585 T1584 arg1Of protein,the
R1406 T1585 T1586 arg1Of protein,to
R1407 T1587 T1588 arg1Of ubiquitination,and
R1408 T1588 T1586 arg2Of and,to
R1409 T1588 T1591 arg1Of and,","
R1410 T1588 T1592 arg1Of and,which
R1411 T1588 T1593 arg1Of and,releases
R1412 T1590 T1588 arg2Of degradation,and
R1413 T1590 T1589 arg1Of degradation,proteasomal
R1414 T1597 T1593 arg2Of complex,releases
R1415 T1597 T1594 arg1Of complex,the
R1416 T1597 T1595 arg1Of complex,functional
R1417 T1597 T1596 arg1Of complex,NF-κB
R1418 T1597 T1598 arg1Of complex,in
R1419 T1600 T1598 arg2Of nucleus,in
R1420 T1600 T1599 arg1Of nucleus,the

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2442 0-2 IN denotes In
T2443 3-6 DT denotes the
T2444 7-16 JJ denotes canonical
T2445 17-24 NN denotes pathway
T2446 25-27 IN denotes of
T2447 28-33 JJ denotes NF-κB
T2448 34-44 NN denotes activation
T2449 44-45 , denotes ,
T2450 46-49 DT denotes the
T2451 50-59 VBN denotes activated
T2452 60-63 NNP denotes IκB
T2453 64-70 NN denotes kinase
T2454 71-72 -LRB- denotes (
T2455 72-75 NNP denotes IKK
T2456 75-76 -RRB- denotes )
T2457 77-91 VBZ denotes phosphorylates
T2458 92-95 NNP denotes IκB
T2459 96-98 IN denotes at
T2460 99-107 JJ denotes specific
T2461 108-114 NN denotes serine
T2462 115-123 NNS denotes residues
T2463 124-128 WDT denotes that
T2464 129-135 VBP denotes target
T2465 136-139 DT denotes the
T2466 140-147 NN denotes protein
T2467 148-150 TO denotes to
T2468 151-165 NN denotes ubiquitination
T2469 166-169 CC denotes and
T2470 170-181 JJ denotes proteasomal
T2471 182-193 NN denotes degradation
T2472 193-194 , denotes ,
T2473 195-200 WDT denotes which
T2474 201-209 VBZ denotes releases
T2475 210-213 DT denotes the
T2476 214-224 JJ denotes functional
T2477 225-230 NN denotes NF-κB
T2478 231-238 NN denotes complex
T2479 239-241 IN denotes in
T2480 242-245 DT denotes the
T2481 246-253 NN denotes nucleus
T2482 253-254 . denotes .
R2129 T2474 T2471 relcl releases,degradation
R2130 T2475 T2478 det the,complex
R2131 T2476 T2478 amod functional,complex
R2133 T2477 T2478 compound NF-κB,complex
R2134 T2478 T2474 dobj complex,releases
R2136 T2479 T2478 prep in,complex
R2137 T2480 T2481 det the,nucleus
R2138 T2481 T2479 pobj nucleus,in
R2140 T2482 T2457 punct .,phosphorylates
R2319 T2442 T2457 prep In,phosphorylates
R2323 T2443 T2445 det the,pathway
R2327 T2444 T2445 amod canonical,pathway
R2331 T2445 T2442 pobj pathway,In
R2335 T2446 T2445 prep of,pathway
R2339 T2447 T2448 amod NF-κB,activation
R2344 T2448 T2446 pobj activation,of
R2348 T2449 T2457 punct ",",phosphorylates
R2354 T2450 T2453 det the,kinase
R2358 T2451 T2453 amod activated,kinase
R2362 T2452 T2453 compound IκB,kinase
R2365 T2453 T2457 nsubj kinase,phosphorylates
R2367 T2454 T2455 punct (,IKK
R2371 T2455 T2453 appos IKK,kinase
R2375 T2456 T2453 punct ),kinase
R2379 T2457 T2457 ROOT phosphorylates,phosphorylates
R2383 T2458 T2457 dobj IκB,phosphorylates
R2387 T2459 T2457 prep at,phosphorylates
R2390 T2460 T2462 amod specific,residues
R2391 T2461 T2462 compound serine,residues
R2392 T2462 T2459 pobj residues,at
R2394 T2463 T2464 nsubj that,target
R2398 T2464 T2462 relcl target,residues
R2405 T2465 T2466 det the,protein
R2410 T2466 T2464 dobj protein,target
R2413 T2467 T2468 aux to,ubiquitination
R2417 T2468 T2464 advcl ubiquitination,target
R2421 T2469 T2468 cc and,ubiquitination
R2425 T2470 T2471 amod proteasomal,degradation
R2429 T2471 T2468 conj degradation,ubiquitination
R2433 T2472 T2471 punct ",",degradation
R2437 T2473 T2474 nsubj which,releases

GO-BP

Id Subject Object Predicate Lexical cue
T3172 28-44 http://purl.obolibrary.org/obo/GO_0051092 denotes NF-κB activation
T3175 72-75 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK
T3179 140-165 http://purl.obolibrary.org/obo/GO_0016567 denotes protein to ubiquitination
T3180 182-193 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation

GO-MF

Id Subject Object Predicate Lexical cue
T3234 72-75 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK

GO-CC

Id Subject Object Predicate Lexical cue
T3207 225-238 http://purl.obolibrary.org/obo/GO_0071159 denotes NF-κB complex
T3209 246-253 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

sentences

Id Subject Object Predicate Lexical cue
T1433 0-254 Sentence denotes In the canonical pathway of NF-κB activation, the activated IκB kinase (IKK) phosphorylates IκB at specific serine residues that target the protein to ubiquitination and proteasomal degradation, which releases the functional NF-κB complex in the nucleus.
T15 0-254 Sentence denotes In the canonical pathway of NF-κB activation, the activated IκB kinase (IKK) phosphorylates IκB at specific serine residues that target the protein to ubiquitination and proteasomal degradation, which releases the functional NF-κB complex in the nucleus.

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T4204 28-33 Protein denotes NF-κB
T4205 60-70 Protein denotes IκB kinase
T4206 72-75 Protein denotes IKK
T4207 92-95 Protein denotes IκB
T4208 225-230 Protein denotes NF-κB
T4209 34-44 Positive_regulation denotes activation
T4210 50-59 Positive_regulation denotes activated
T4211 50-59 Positive_regulation denotes activated
T4212 77-91 Phosphorylation denotes phosphorylates
T4213 77-91 Phosphorylation denotes phosphorylates
T4214 77-91 Phosphorylation denotes phosphorylates
T4215 182-193 Protein_catabolism denotes degradation
T4216 182-193 Protein_catabolism denotes degradation
T4217 201-209 Positive_regulation denotes releases
T4218 201-209 Positive_regulation denotes releases
T4219 231-238 Binding denotes complex
T4220 129-135 Regulation denotes target
T4221 129-135 Regulation denotes target
R3789 T4204 T4209 themeOf NF-κB,activation
R3791 T4205 T4210 themeOf IκB kinase,activated
R3792 T4205 T4212 themeOf IκB kinase,phosphorylates
R3793 T4206 T4211 themeOf IKK,activated
R3794 T4206 T4213 themeOf IKK,phosphorylates
R3795 T4206 T4215 themeOf IKK,degradation
R3797 T4207 T4214 themeOf IκB,phosphorylates
R3798 T4207 T4216 themeOf IκB,degradation
R3800 T4208 T4219 themeOf NF-κB,complex
R3804 T4215 T4217 themeOf degradation,releases
R3805 T4215 T4220 themeOf degradation,target
R3807 T4216 T4218 themeOf degradation,releases
R3808 T4216 T4221 themeOf degradation,target

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2259 60-70 O15111 denotes IκB kinase
T2260 60-70 Q60680-2 denotes IκB kinase