PMC:3333881 / 19492-19716 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T9119","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T9120","span":{"begin":3,"end":11},"obj":"NN"},{"id":"T9121","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T9122","span":{"begin":13,"end":16},"obj":"NN"},{"id":"T9123","span":{"begin":17,"end":22},"obj":"VB"},{"id":"T9124","span":{"begin":23,"end":25},"obj":"TO"},{"id":"T9125","span":{"begin":26,"end":29},"obj":"DT"},{"id":"T9126","span":{"begin":30,"end":35},"obj":"NN"},{"id":"T9127","span":{"begin":36,"end":51},"obj":"NN"},{"id":"T9128","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T9129","span":{"begin":55,"end":68},"obj":"JJ"},{"id":"T9130","span":{"begin":69,"end":74},"obj":"NN"},{"id":"T9131","span":{"begin":75,"end":78},"obj":"CC"},{"id":"T9132","span":{"begin":79,"end":82},"obj":"PRP-DOLLAR-"},{"id":"T9133","span":{"begin":83,"end":90},"obj":"NN"},{"id":"T9134","span":{"begin":91,"end":100},"obj":"VB"},{"id":"T9135","span":{"begin":101,"end":110},"obj":"VB"},{"id":"T9136","span":{"begin":111,"end":114},"obj":"NN"},{"id":"T9137","span":{"begin":115,"end":126},"obj":"NN"},{"id":"T9138","span":{"begin":127,"end":128},"obj":"-LRB-"},{"id":"T9139","span":{"begin":128,"end":134},"obj":"NN"},{"id":"T9140","span":{"begin":135,"end":137},"obj":"NN"},{"id":"T9141","span":{"begin":137,"end":138},"obj":"-RRB-"},{"id":"T9142","span":{"begin":138,"end":139},"obj":"-COMMA-"},{"id":"T9143","span":{"begin":140,"end":150},"obj":"VB"},{"id":"T9144","span":{"begin":151,"end":155},"obj":"IN"},{"id":"T9145","span":{"begin":156,"end":159},"obj":"DT"},{"id":"T9146","span":{"begin":160,"end":165},"obj":"JJ"},{"id":"T9147","span":{"begin":166,"end":173},"obj":"NN"},{"id":"T9148","span":{"begin":174,"end":177},"obj":"VB"},{"id":"T9149","span":{"begin":178,"end":179},"obj":"DT"},{"id":"T9150","span":{"begin":180,"end":189},"obj":"NN"},{"id":"T9151","span":{"begin":190,"end":192},"obj":"IN"},{"id":"T9152","span":{"begin":193,"end":196},"obj":"DT"},{"id":"T9153","span":{"begin":197,"end":202},"obj":"NN"},{"id":"T9154","span":{"begin":203,"end":210},"obj":"NN"},{"id":"T9155","span":{"begin":211,"end":216},"obj":"VB"},{"id":"T9156","span":{"begin":217,"end":219},"obj":"TO"},{"id":"T9157","span":{"begin":220,"end":223},"obj":"NN"}],"relations":[{"id":"R7624","pred":"arg2Of","subj":"T9120","obj":"T9119"},{"id":"R7625","pred":"arg1Of","subj":"T9122","obj":"T9123"},{"id":"R7626","pred":"arg1Of","subj":"T9123","obj":"T9124"},{"id":"R7627","pred":"arg1Of","subj":"T9123","obj":"T9131"},{"id":"R7628","pred":"arg2Of","subj":"T9127","obj":"T9124"},{"id":"R7629","pred":"arg1Of","subj":"T9127","obj":"T9125"},{"id":"R7630","pred":"arg1Of","subj":"T9127","obj":"T9126"},{"id":"R7631","pred":"arg1Of","subj":"T9127","obj":"T9128"},{"id":"R7632","pred":"arg2Of","subj":"T9130","obj":"T9128"},{"id":"R7633","pred":"arg1Of","subj":"T9130","obj":"T9129"},{"id":"R7634","pred":"arg1Of","subj":"T9131","obj":"T9119"},{"id":"R7635","pred":"arg1Of","subj":"T9131","obj":"T9121"},{"id":"R7636","pred":"arg1Of","subj":"T9133","obj":"T9132"},{"id":"R7637","pred":"arg1Of","subj":"T9133","obj":"T9134"},{"id":"R7638","pred":"arg2Of","subj":"T9134","obj":"T9131"},{"id":"R7639","pred":"arg1Of","subj":"T9134","obj":"T9135"},{"id":"R7640","pred":"arg1Of","subj":"T9134","obj":"T9142"},{"id":"R7641","pred":"arg2Of","subj":"T9137","obj":"T9135"},{"id":"R7642","pred":"arg1Of","subj":"T9137","obj":"T9136"},{"id":"R7643","pred":"arg1Of","subj":"T9137","obj":"T9138"},{"id":"R7644","pred":"arg2Of","subj":"T9140","obj":"T9138"},{"id":"R7645","pred":"arg1Of","subj":"T9140","obj":"T9139"},{"id":"R7646","pred":"arg3Of","subj":"T9141","obj":"T9138"},{"id":"R7647","pred":"arg2Of","subj":"T9143","obj":"T9134"},{"id":"R7648","pred":"arg1Of","subj":"T9143","obj":"T9156"},{"id":"R7649","pred":"arg1Of","subj":"T9147","obj":"T9145"},{"id":"R7650","pred":"arg1Of","subj":"T9147","obj":"T9146"},{"id":"R7651","pred":"arg1Of","subj":"T9147","obj":"T9148"},{"id":"R7652","pred":"arg2Of","subj":"T9148","obj":"T9143"},{"id":"R7653","pred":"arg1Of","subj":"T9148","obj":"T9144"},{"id":"R7654","pred":"arg2Of","subj":"T9150","obj":"T9148"},{"id":"R7655","pred":"arg1Of","subj":"T9150","obj":"T9149"},{"id":"R7656","pred":"arg1Of","subj":"T9150","obj":"T9151"},{"id":"R7657","pred":"arg2Of","subj":"T9154","obj":"T9151"},{"id":"R7658","pred":"arg1Of","subj":"T9154","obj":"T9152"},{"id":"R7659","pred":"arg1Of","subj":"T9154","obj":"T9153"},{"id":"R7660","pred":"arg2Of","subj":"T9154","obj":"T9155"},{"id":"R7661","pred":"arg2Of","subj":"T9157","obj":"T9156"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}

    bionlp-st-ge-2016-coref

    {"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T9367","span":{"begin":79,"end":82},"obj":"Anaphor"},{"id":"T9368","span":{"begin":13,"end":16},"obj":"Antecedent"}],"relations":[{"id":"R7871","pred":"boundBy","subj":"T9367","obj":"T9368"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T10127","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T10128","span":{"begin":3,"end":11},"obj":"NN"},{"id":"T10129","span":{"begin":11,"end":12},"obj":","},{"id":"T10130","span":{"begin":13,"end":16},"obj":"NNP"},{"id":"T10131","span":{"begin":17,"end":22},"obj":"VBD"},{"id":"T10132","span":{"begin":23,"end":25},"obj":"TO"},{"id":"T10133","span":{"begin":26,"end":29},"obj":"DT"},{"id":"T10134","span":{"begin":30,"end":35},"obj":"JJ"},{"id":"T10135","span":{"begin":36,"end":51},"obj":"NN"},{"id":"T10136","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T10137","span":{"begin":55,"end":68},"obj":"JJ"},{"id":"T10138","span":{"begin":69,"end":74},"obj":"NNS"},{"id":"T10139","span":{"begin":75,"end":78},"obj":"CC"},{"id":"T10140","span":{"begin":79,"end":82},"obj":"PRP$"},{"id":"T10141","span":{"begin":83,"end":90},"obj":"JJ"},{"id":"T10142","span":{"begin":91,"end":100},"obj":"VBN"},{"id":"T10143","span":{"begin":101,"end":110},"obj":"VBG"},{"id":"T10144","span":{"begin":111,"end":114},"obj":"NNP"},{"id":"T10145","span":{"begin":115,"end":126},"obj":"NN"},{"id":"T10146","span":{"begin":127,"end":128},"obj":"-LRB-"},{"id":"T10147","span":{"begin":128,"end":134},"obj":"NN"},{"id":"T10148","span":{"begin":135,"end":137},"obj":"NN"},{"id":"T10149","span":{"begin":137,"end":138},"obj":"-RRB-"},{"id":"T10150","span":{"begin":138,"end":139},"obj":","},{"id":"T10151","span":{"begin":140,"end":150},"obj":"VBG"},{"id":"T10152","span":{"begin":151,"end":155},"obj":"IN"},{"id":"T10153","span":{"begin":156,"end":159},"obj":"DT"},{"id":"T10154","span":{"begin":160,"end":165},"obj":"JJ"},{"id":"T10155","span":{"begin":166,"end":173},"obj":"NN"},{"id":"T10156","span":{"begin":174,"end":177},"obj":"VBD"},{"id":"T10157","span":{"begin":178,"end":179},"obj":"DT"},{"id":"T10158","span":{"begin":180,"end":189},"obj":"NN"},{"id":"T10159","span":{"begin":190,"end":192},"obj":"IN"},{"id":"T10160","span":{"begin":193,"end":196},"obj":"DT"},{"id":"T10161","span":{"begin":197,"end":202},"obj":"JJ"},{"id":"T10162","span":{"begin":203,"end":210},"obj":"JJ"},{"id":"T10163","span":{"begin":211,"end":216},"obj":"VBN"},{"id":"T10164","span":{"begin":217,"end":219},"obj":"TO"},{"id":"T10165","span":{"begin":220,"end":223},"obj":"NNP"},{"id":"T10166","span":{"begin":223,"end":224},"obj":"."}],"relations":[{"id":"R8467","pred":"prep","subj":"T10127","obj":"T10131"},{"id":"R8468","pred":"pobj","subj":"T10128","obj":"T10127"},{"id":"R8469","pred":"punct","subj":"T10129","obj":"T10131"},{"id":"R8470","pred":"nsubj","subj":"T10130","obj":"T10131"},{"id":"R8480","pred":"poss","subj":"T10140","obj":"T10142"},{"id":"R8481","pred":"advmod","subj":"T10141","obj":"T10142"},{"id":"R8482","pred":"dep","subj":"T10142","obj":"T10131"},{"id":"R8483","pred":"prep","subj":"T10143","obj":"T10142"},{"id":"R8484","pred":"compound","subj":"T10144","obj":"T10145"},{"id":"R8485","pred":"pobj","subj":"T10145","obj":"T10143"},{"id":"R8486","pred":"punct","subj":"T10146","obj":"T10148"},{"id":"R8487","pred":"compound","subj":"T10147","obj":"T10148"},{"id":"R8488","pred":"appos","subj":"T10148","obj":"T10145"},{"id":"R8489","pred":"punct","subj":"T10149","obj":"T10142"},{"id":"R8490","pred":"punct","subj":"T10150","obj":"T10131"},{"id":"R8491","pred":"advcl","subj":"T10151","obj":"T10131"},{"id":"R8492","pred":"mark","subj":"T10152","obj":"T10156"},{"id":"R8493","pred":"det","subj":"T10153","obj":"T10155"},{"id":"R8494","pred":"amod","subj":"T10154","obj":"T10155"},{"id":"R8495","pred":"nsubj","subj":"T10155","obj":"T10156"},{"id":"R8496","pred":"ccomp","subj":"T10156","obj":"T10151"},{"id":"R8497","pred":"det","subj":"T10157","obj":"T10158"},{"id":"R8498","pred":"attr","subj":"T10158","obj":"T10156"},{"id":"R8499","pred":"prep","subj":"T10159","obj":"T10158"},{"id":"R8500","pred":"det","subj":"T10160","obj":"T10163"},{"id":"R8501","pred":"amod","subj":"T10161","obj":"T10163"},{"id":"R8502","pred":"amod","subj":"T10162","obj":"T10163"},{"id":"R8503","pred":"conj","subj":"T10163","obj":"T10156"},{"id":"R8504","pred":"prep","subj":"T10164","obj":"T10163"},{"id":"R8505","pred":"pobj","subj":"T10165","obj":"T10164"},{"id":"R8506","pred":"punct","subj":"T10166","obj":"T10131"},{"id":"R8471","pred":"ROOT","subj":"T10131","obj":"T10131"},{"id":"R8472","pred":"prep","subj":"T10132","obj":"T10131"},{"id":"R8473","pred":"det","subj":"T10133","obj":"T10135"},{"id":"R8474","pred":"amod","subj":"T10134","obj":"T10135"},{"id":"R8475","pred":"pobj","subj":"T10135","obj":"T10132"},{"id":"R8476","pred":"prep","subj":"T10136","obj":"T10135"},{"id":"R8477","pred":"amod","subj":"T10137","obj":"T10138"},{"id":"R8478","pred":"pobj","subj":"T10138","obj":"T10136"},{"id":"R8479","pred":"cc","subj":"T10139","obj":"T10135"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T10465","span":{"begin":83,"end":90},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T10446","span":{"begin":69,"end":74},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T10458","span":{"begin":197,"end":210},"obj":"http://purl.obolibrary.org/obo/GO_0071159"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}

    sentences

    {"project":"sentences","denotations":[{"id":"T8547","span":{"begin":0,"end":224},"obj":"Sentence"},{"id":"T126","span":{"begin":0,"end":224},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T11136","span":{"begin":13,"end":16},"obj":"Protein"},{"id":"T11137","span":{"begin":17,"end":22},"obj":"Binding"},{"id":"T11138","span":{"begin":83,"end":90},"obj":"Binding"},{"id":"T11139","span":{"begin":91,"end":100},"obj":"Positive_regulation"}],"relations":[{"id":"R9125","pred":"themeOf","subj":"T11136","obj":"T11137"},{"id":"R9126","pred":"themeOf","subj":"T11136","obj":"T11138"},{"id":"R9127","pred":"themeOf","subj":"T11138","obj":"T11139"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T11269","span":{"begin":13,"end":16},"obj":"Protein"},{"id":"T11270","span":{"begin":30,"end":51},"obj":"Protein"},{"id":"T11271","span":{"begin":197,"end":210},"obj":"Protein"},{"id":"T11272","span":{"begin":17,"end":22},"obj":"Binding"},{"id":"T11273","span":{"begin":17,"end":22},"obj":"Binding"},{"id":"T11274","span":{"begin":83,"end":90},"obj":"Binding"},{"id":"T11275","span":{"begin":91,"end":100},"obj":"Positive_regulation"},{"id":"T11276","span":{"begin":180,"end":189},"obj":"Gene_expression"},{"id":"T11277","span":{"begin":211,"end":216},"obj":"Binding"}],"relations":[{"id":"R9200","pred":"themeOf","subj":"T11269","obj":"T11272"},{"id":"R9202","pred":"themeOf","subj":"T11269","obj":"T11273"},{"id":"R9203","pred":"themeOf","subj":"T11269","obj":"T11274"},{"id":"R9205","pred":"themeOf","subj":"T11270","obj":"T11273"},{"id":"R9209","pred":"themeOf","subj":"T11271","obj":"T11276"},{"id":"R9211","pred":"themeOf","subj":"T11271","obj":"T11277"},{"id":"R9212","pred":"themeOf","subj":"T11274","obj":"T11275"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T8491","span":{"begin":13,"end":16},"obj":"Protein"},{"id":"T8492","span":{"begin":17,"end":22},"obj":"Binding"},{"id":"T8493","span":{"begin":83,"end":90},"obj":"Binding"},{"id":"T8494","span":{"begin":91,"end":100},"obj":"Positive_regulation"}],"relations":[{"id":"R7013","pred":"themeOf","subj":"T8491","obj":"T8492"},{"id":"R7014","pred":"themeOf","subj":"T8491","obj":"T8493"},{"id":"R7015","pred":"themeOf","subj":"T8493","obj":"T8494"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T9486","span":{"begin":13,"end":16},"obj":"P04610"},{"id":"T9487","span":{"begin":13,"end":16},"obj":"P04608"},{"id":"T9488","span":{"begin":13,"end":16},"obj":"P04605"},{"id":"T9489","span":{"begin":13,"end":16},"obj":"Q8UMQ1"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"In addition, Tat bound to the NF-κB oligonucleotide in un-stimulated cells and its binding increased following PMA stimulation (Figure 2A), suggesting that the viral protein was a component of the NF-κB complex bound to DNA."}