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PMC:3333881 / 1927-2093 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22187158-12360211-77584395 63-64 12360211 denotes 3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1547 1-5 IN denotes with
T1548 6-9 DT denotes the
T1549 10-15 NN denotes NF-κB
T1550 16-23 NN denotes complex
T1551 24-27 CC denotes and
T1552 28-37 VB denotes interfere
T1553 38-42 IN denotes with
T1554 43-46 PRP-DOLLAR- denotes its
T1555 47-54 NN denotes binding
T1556 55-57 TO denotes to
T1557 58-61 NN denotes DNA
T1558 62-63 -LRB- denotes (
T1559 63-64 CD denotes 3
T1560 64-65 -RRB- denotes )
T1561 67-69 IN denotes In
T1562 70-73 DT denotes the
T1563 74-83 JJ denotes canonical
T1564 84-91 NN denotes pathway
T1565 92-94 IN denotes of
T1566 95-100 NN denotes NF-κB
T1567 101-111 NN denotes activation
T1568 111-112 -COMMA- denotes ,
T1569 113-116 DT denotes the
T1570 117-126 VB denotes activated
T1571 127-130 NN denotes IκB
T1572 131-137 NN denotes kinase
T1573 138-139 -LRB- denotes (
T1574 139-142 NN denotes IKK
T1575 142-143 -RRB- denotes )
T1576 144-158 VB denotes phosphorylates
T1577 159-162 NN denotes IκB
T1578 163-165 IN denotes at
R1370 T1550 T1547 arg2Of complex,with
R1371 T1550 T1548 arg1Of complex,the
R1372 T1550 T1549 arg1Of complex,NF-κB
R1373 T1552 T1551 arg2Of interfere,and
R1374 T1552 T1553 arg1Of interfere,with
R1375 T1555 T1553 arg2Of binding,with
R1376 T1555 T1554 arg1Of binding,its
R1377 T1555 T1556 arg1Of binding,to
R1378 T1557 T1556 arg2Of DNA,to
R1379 T1557 T1558 arg1Of DNA,(
R1380 T1559 T1558 arg2Of 3,(
R1381 T1560 T1558 arg3Of ),(
R1382 T1564 T1561 arg2Of pathway,In
R1383 T1564 T1562 arg1Of pathway,the
R1384 T1564 T1563 arg1Of pathway,canonical
R1385 T1564 T1565 arg1Of pathway,of
R1386 T1567 T1565 arg2Of activation,of
R1387 T1567 T1566 arg1Of activation,NF-κB
R1388 T1572 T1569 arg1Of kinase,the
R1389 T1572 T1570 arg2Of kinase,activated
R1390 T1572 T1571 arg1Of kinase,IκB
R1391 T1572 T1573 arg1Of kinase,(
R1392 T1572 T1576 arg1Of kinase,phosphorylates
R1393 T1574 T1573 arg2Of IKK,(
R1394 T1575 T1573 arg3Of ),(
R1395 T1576 T1561 arg1Of phosphorylates,In
R1396 T1576 T1568 arg1Of phosphorylates,","
R1397 T1576 T1578 arg1Of phosphorylates,at
R1398 T1577 T1576 arg2Of IκB,phosphorylates

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2427 1-5 IN denotes with
T2428 6-9 DT denotes the
T2429 10-15 NNP denotes NF-κB
T2430 16-23 NN denotes complex
T2431 24-27 CC denotes and
T2432 28-37 VB denotes interfere
T2433 38-42 IN denotes with
T2434 43-46 PRP$ denotes its
T2435 47-54 JJ denotes binding
T2436 55-57 TO denotes to
T2437 58-61 NNP denotes DNA
T2438 62-63 -LRB- denotes (
T2439 63-64 LS denotes 3
T2440 64-65 -RRB- denotes )
T2441 65-66 . denotes .
T2442 67-69 IN denotes In
T2443 70-73 DT denotes the
T2444 74-83 JJ denotes canonical
T2445 84-91 NN denotes pathway
T2446 92-94 IN denotes of
T2447 95-100 JJ denotes NF-κB
T2448 101-111 NN denotes activation
T2449 111-112 , denotes ,
T2450 113-116 DT denotes the
T2451 117-126 VBN denotes activated
T2452 127-130 NNP denotes IκB
T2453 131-137 NN denotes kinase
T2454 138-139 -LRB- denotes (
T2455 139-142 NNP denotes IKK
T2456 142-143 -RRB- denotes )
T2457 144-158 VBZ denotes phosphorylates
T2458 159-162 NNP denotes IκB
T2459 163-165 IN denotes at
R2265 T2428 T2430 det the,complex
R2269 T2429 T2430 compound NF-κB,complex
R2272 T2430 T2427 pobj complex,with
R2280 T2432 T2432 ROOT interfere,interfere
R2284 T2433 T2432 prep with,interfere
R2288 T2434 T2435 poss its,binding
R2292 T2435 T2433 pobj binding,with
R2296 T2436 T2435 prep to,binding
R2303 T2437 T2436 pobj DNA,to
R2308 T2438 T2439 punct (,3
R2312 T2439 T2437 appos 3,DNA
R2313 T2440 T2439 punct ),3
R2315 T2441 T2432 punct .,interfere
R2319 T2442 T2457 prep In,phosphorylates
R2323 T2443 T2445 det the,pathway
R2327 T2444 T2445 amod canonical,pathway
R2331 T2445 T2442 pobj pathway,In
R2335 T2446 T2445 prep of,pathway
R2339 T2447 T2448 amod NF-κB,activation
R2344 T2448 T2446 pobj activation,of
R2348 T2449 T2457 punct ",",phosphorylates
R2354 T2450 T2453 det the,kinase
R2358 T2451 T2453 amod activated,kinase
R2362 T2452 T2453 compound IκB,kinase
R2365 T2453 T2457 nsubj kinase,phosphorylates
R2367 T2454 T2455 punct (,IKK
R2371 T2455 T2453 appos IKK,kinase
R2375 T2456 T2453 punct ),kinase
R2379 T2457 T2457 ROOT phosphorylates,phosphorylates
R2383 T2458 T2457 dobj IκB,phosphorylates
R2387 T2459 T2457 prep at,phosphorylates

GO-BP

Id Subject Object Predicate Lexical cue
T3172 95-111 http://purl.obolibrary.org/obo/GO_0051092 denotes NF-κB activation
T3175 139-142 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK

GO-MF

Id Subject Object Predicate Lexical cue
T3225 47-61 http://purl.obolibrary.org/obo/GO_0003677 denotes binding to DNA
T3229 47-54 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T3234 139-142 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK

GO-CC

Id Subject Object Predicate Lexical cue
T3206 10-23 http://purl.obolibrary.org/obo/GO_0071159 denotes NF-κB complex

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T4198 10-15 Protein denotes NF-κB
T4202 47-54 Binding denotes binding
T4203 47-54 Binding denotes binding
T4204 95-100 Protein denotes NF-κB
T4205 127-137 Protein denotes IκB kinase
T4206 139-142 Protein denotes IKK
T4207 159-162 Protein denotes IκB
T4209 101-111 Positive_regulation denotes activation
T4210 117-126 Positive_regulation denotes activated
T4211 117-126 Positive_regulation denotes activated
T4212 144-158 Phosphorylation denotes phosphorylates
T4213 144-158 Phosphorylation denotes phosphorylates
T4214 144-158 Phosphorylation denotes phosphorylates
R3789 T4204 T4209 themeOf NF-κB,activation
R3791 T4205 T4210 themeOf IκB kinase,activated
R3792 T4205 T4212 themeOf IκB kinase,phosphorylates
R3793 T4206 T4211 themeOf IKK,activated
R3794 T4206 T4213 themeOf IKK,phosphorylates
R3797 T4207 T4214 themeOf IκB,phosphorylates

test2

Id Subject Object Predicate Lexical cue
T1149 47-54 Binding denotes binding

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2259 127-137 O15111 denotes IκB kinase
T2260 127-137 Q60680-2 denotes IκB kinase