PMC:3333881 / 1664-2005
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
22187158-19302050-77584394 | 224-225 | 19302050 | denotes | 2 |
22187158-12360211-77584395 | 326-327 | 12360211 | denotes | 3 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1509 | 18-21 | CC | denotes | and |
T1510 | 22-33 | NN | denotes | DNA-binding |
T1511 | 35-38 | DT | denotes | The |
T1512 | 39-54 | JJ | denotes | transcriptional |
T1513 | 55-63 | NN | denotes | activity |
T1514 | 64-66 | IN | denotes | of |
T1515 | 67-70 | DT | denotes | the |
T1516 | 71-76 | NN | denotes | NF-κB |
T1517 | 77-84 | NN | denotes | complex |
T1518 | 85-92 | VB | denotes | depends |
T1519 | 93-95 | IN | denotes | on |
T1520 | 96-101 | NN | denotes | dimer |
T1521 | 102-113 | NN | denotes | composition |
T1522 | 114-119 | IN | denotes | since |
T1523 | 120-130 | JJ | denotes | C-terminal |
T1524 | 131-140 | JJ | denotes | unrelated |
T1525 | 141-156 | JJ | denotes | transcriptional |
T1526 | 157-167 | NN | denotes | activation |
T1527 | 168-175 | NN | denotes | domains |
T1528 | 176-179 | VB | denotes | are |
T1529 | 180-187 | JJ | denotes | present |
T1530 | 188-199 | RB | denotes | exclusively |
T1531 | 200-202 | IN | denotes | in |
T1532 | 203-206 | NN | denotes | p65 |
T1533 | 206-207 | -COMMA- | denotes | , |
T1534 | 208-212 | NN | denotes | RelB |
T1535 | 213-216 | CC | denotes | and |
T1536 | 217-222 | NN | denotes | c-Rel |
T1537 | 223-224 | -LRB- | denotes | ( |
T1538 | 224-225 | CD | denotes | 2 |
T1539 | 225-226 | -RRB- | denotes | ) |
T1540 | 228-238 | NN | denotes | Inhibitors |
T1541 | 239-241 | IN | denotes | of |
T1542 | 242-247 | NN | denotes | NF-κB |
T1543 | 248-249 | -LRB- | denotes | ( |
T1544 | 249-252 | NN | denotes | IκB |
T1545 | 252-253 | -RRB- | denotes | ) |
T1546 | 254-263 | VB | denotes | associate |
T1547 | 264-268 | IN | denotes | with |
T1548 | 269-272 | DT | denotes | the |
T1549 | 273-278 | NN | denotes | NF-κB |
T1550 | 279-286 | NN | denotes | complex |
T1551 | 287-290 | CC | denotes | and |
T1552 | 291-300 | VB | denotes | interfere |
T1553 | 301-305 | IN | denotes | with |
T1554 | 306-309 | PRP-DOLLAR- | denotes | its |
T1555 | 310-317 | NN | denotes | binding |
T1556 | 318-320 | TO | denotes | to |
T1557 | 321-324 | NN | denotes | DNA |
T1558 | 325-326 | -LRB- | denotes | ( |
T1559 | 326-327 | CD | denotes | 3 |
T1560 | 327-328 | -RRB- | denotes | ) |
T1561 | 330-332 | IN | denotes | In |
T1562 | 333-336 | DT | denotes | the |
R1331 | T1510 | T1509 | arg2Of | DNA-binding,and |
R1332 | T1513 | T1511 | arg1Of | activity,The |
R1333 | T1513 | T1512 | arg1Of | activity,transcriptional |
R1334 | T1513 | T1514 | arg1Of | activity,of |
R1335 | T1513 | T1518 | arg1Of | activity,depends |
R1336 | T1517 | T1514 | arg2Of | complex,of |
R1337 | T1517 | T1515 | arg1Of | complex,the |
R1338 | T1517 | T1516 | arg1Of | complex,NF-κB |
R1339 | T1518 | T1519 | arg1Of | depends,on |
R1340 | T1518 | T1522 | arg1Of | depends,since |
R1341 | T1521 | T1519 | arg2Of | composition,on |
R1342 | T1521 | T1520 | arg1Of | composition,dimer |
R1343 | T1527 | T1523 | arg1Of | domains,C-terminal |
R1344 | T1527 | T1524 | arg1Of | domains,unrelated |
R1345 | T1527 | T1525 | arg1Of | domains,transcriptional |
R1346 | T1527 | T1526 | arg1Of | domains,activation |
R1347 | T1527 | T1528 | arg1Of | domains,are |
R1348 | T1527 | T1529 | arg1Of | domains,present |
R1349 | T1528 | T1522 | arg2Of | are,since |
R1350 | T1529 | T1528 | arg2Of | present,are |
R1351 | T1529 | T1531 | arg1Of | present,in |
R1352 | T1531 | T1530 | arg1Of | in,exclusively |
R1353 | T1532 | T1533 | arg1Of | p65,"," |
R1354 | T1533 | T1535 | arg1Of | ",",and |
R1355 | T1534 | T1533 | arg2Of | RelB,"," |
R1356 | T1535 | T1531 | arg2Of | and,in |
R1357 | T1536 | T1535 | arg2Of | c-Rel,and |
R1358 | T1536 | T1537 | arg1Of | c-Rel,( |
R1359 | T1538 | T1537 | arg2Of | 2,( |
R1360 | T1539 | T1537 | arg3Of | ),( |
R1361 | T1540 | T1541 | arg1Of | Inhibitors,of |
R1362 | T1540 | T1546 | arg1Of | Inhibitors,associate |
R1363 | T1540 | T1552 | arg1Of | Inhibitors,interfere |
R1364 | T1542 | T1541 | arg2Of | NF-κB,of |
R1365 | T1542 | T1543 | arg1Of | NF-κB,( |
R1366 | T1544 | T1543 | arg2Of | IκB,( |
R1367 | T1545 | T1543 | arg3Of | ),( |
R1368 | T1546 | T1547 | arg1Of | associate,with |
R1369 | T1546 | T1551 | arg1Of | associate,and |
R1370 | T1550 | T1547 | arg2Of | complex,with |
R1371 | T1550 | T1548 | arg1Of | complex,the |
R1372 | T1550 | T1549 | arg1Of | complex,NF-κB |
R1373 | T1552 | T1551 | arg2Of | interfere,and |
R1374 | T1552 | T1553 | arg1Of | interfere,with |
R1375 | T1555 | T1553 | arg2Of | binding,with |
R1376 | T1555 | T1554 | arg1Of | binding,its |
R1377 | T1555 | T1556 | arg1Of | binding,to |
R1378 | T1557 | T1556 | arg2Of | DNA,to |
R1379 | T1557 | T1558 | arg1Of | DNA,( |
R1380 | T1559 | T1558 | arg2Of | 3,( |
R1381 | T1560 | T1558 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2387 | 18-21 | CC | denotes | and |
T2388 | 22-33 | JJ | denotes | DNA-binding |
T2389 | 33-34 | . | denotes | . |
T2390 | 35-38 | DT | denotes | The |
T2391 | 39-54 | JJ | denotes | transcriptional |
T2392 | 55-63 | NN | denotes | activity |
T2393 | 64-66 | IN | denotes | of |
T2394 | 67-70 | DT | denotes | the |
T2395 | 71-76 | JJ | denotes | NF-κB |
T2396 | 77-84 | JJ | denotes | complex |
T2397 | 85-92 | VBZ | denotes | depends |
T2398 | 93-95 | IN | denotes | on |
T2399 | 96-101 | NN | denotes | dimer |
T2400 | 102-113 | NN | denotes | composition |
T2401 | 114-119 | IN | denotes | since |
T2402 | 120-130 | JJ | denotes | C-terminal |
T2403 | 131-140 | JJ | denotes | unrelated |
T2404 | 141-156 | JJ | denotes | transcriptional |
T2405 | 157-167 | NN | denotes | activation |
T2406 | 168-175 | NNS | denotes | domains |
T2407 | 176-179 | VBP | denotes | are |
T2408 | 180-187 | JJ | denotes | present |
T2409 | 188-199 | RB | denotes | exclusively |
T2410 | 200-202 | IN | denotes | in |
T2411 | 203-206 | CD | denotes | p65 |
T2412 | 206-207 | , | denotes | , |
T2413 | 208-212 | NNP | denotes | RelB |
T2414 | 213-216 | CC | denotes | and |
T2415 | 217-222 | NNP | denotes | c-Rel |
T2416 | 223-224 | -LRB- | denotes | ( |
T2417 | 224-225 | LS | denotes | 2 |
T2418 | 225-226 | -RRB- | denotes | ) |
T2419 | 226-227 | . | denotes | . |
T2420 | 228-238 | NNS | denotes | Inhibitors |
T2421 | 239-241 | IN | denotes | of |
T2422 | 242-247 | NNP | denotes | NF-κB |
T2423 | 248-249 | -LRB- | denotes | ( |
T2424 | 249-252 | NNP | denotes | IκB |
T2425 | 252-253 | -RRB- | denotes | ) |
T2426 | 254-263 | NN | denotes | associate |
T2427 | 264-268 | IN | denotes | with |
T2428 | 269-272 | DT | denotes | the |
T2429 | 273-278 | NNP | denotes | NF-κB |
T2430 | 279-286 | NN | denotes | complex |
T2431 | 287-290 | CC | denotes | and |
T2432 | 291-300 | VB | denotes | interfere |
T2433 | 301-305 | IN | denotes | with |
T2434 | 306-309 | PRP$ | denotes | its |
T2435 | 310-317 | JJ | denotes | binding |
T2436 | 318-320 | TO | denotes | to |
T2437 | 321-324 | NNP | denotes | DNA |
T2438 | 325-326 | -LRB- | denotes | ( |
T2439 | 326-327 | LS | denotes | 3 |
T2440 | 327-328 | -RRB- | denotes | ) |
T2441 | 328-329 | . | denotes | . |
T2442 | 330-332 | IN | denotes | In |
T2443 | 333-336 | DT | denotes | the |
R2126 | T2390 | T2392 | det | The,activity |
R2127 | T2391 | T2392 | amod | transcriptional,activity |
R2128 | T2392 | T2397 | nsubj | activity,depends |
R2132 | T2393 | T2392 | prep | of,activity |
R2135 | T2394 | T2397 | det | the,depends |
R2139 | T2395 | T2397 | nsubj | NF-κB,depends |
R2143 | T2396 | T2397 | nsubj | complex,depends |
R2146 | T2397 | T2397 | ROOT | depends,depends |
R2152 | T2398 | T2397 | prep | on,depends |
R2154 | T2399 | T2400 | amod | dimer,composition |
R2157 | T2400 | T2398 | pobj | composition,on |
R2161 | T2401 | T2407 | mark | since,are |
R2164 | T2402 | T2406 | amod | C-terminal,domains |
R2168 | T2403 | T2406 | amod | unrelated,domains |
R2171 | T2404 | T2406 | amod | transcriptional,domains |
R2172 | T2405 | T2406 | compound | activation,domains |
R2175 | T2406 | T2407 | nsubj | domains,are |
R2179 | T2407 | T2397 | advcl | are,depends |
R2183 | T2408 | T2407 | acomp | present,are |
R2187 | T2409 | T2408 | advmod | exclusively,present |
R2191 | T2410 | T2407 | prep | in,are |
R2195 | T2411 | T2410 | pobj | p65,in |
R2260 | T2427 | T2426 | prep | with,associate |
R2265 | T2428 | T2430 | det | the,complex |
R2269 | T2429 | T2430 | compound | NF-κB,complex |
R2272 | T2430 | T2427 | pobj | complex,with |
R2276 | T2431 | T2420 | cc | and,Inhibitors |
R2280 | T2432 | T2432 | ROOT | interfere,interfere |
R2284 | T2433 | T2432 | prep | with,interfere |
R2288 | T2434 | T2435 | poss | its,binding |
R2292 | T2435 | T2433 | pobj | binding,with |
R2296 | T2436 | T2435 | prep | to,binding |
R2303 | T2437 | T2436 | pobj | DNA,to |
R2308 | T2438 | T2439 | punct | (,3 |
R2312 | T2439 | T2437 | appos | 3,DNA |
R2313 | T2440 | T2439 | punct | ),3 |
R2315 | T2441 | T2432 | punct | .,interfere |
R2197 | T2412 | T2411 | punct | ",",p65 |
R2209 | T2413 | T2407 | npadvmod | RelB,are |
R2214 | T2414 | T2413 | cc | and,RelB |
R2218 | T2415 | T2413 | conj | c-Rel,RelB |
R2222 | T2416 | T2417 | punct | (,2 |
R2226 | T2417 | T2413 | appos | 2,RelB |
R2230 | T2418 | T2417 | punct | ),2 |
R2235 | T2419 | T2397 | punct | .,depends |
R2239 | T2420 | T2432 | nsubj | Inhibitors,interfere |
R2244 | T2421 | T2420 | prep | of,Inhibitors |
R2247 | T2422 | T2421 | pobj | NF-κB,of |
R2254 | T2423 | T2422 | punct | (,NF-κB |
R2257 | T2424 | T2422 | appos | IκB,NF-κB |
R2258 | T2425 | T2422 | punct | ),NF-κB |
R2259 | T2426 | T2420 | appos | associate,Inhibitors |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3224 | 22-33 | http://purl.obolibrary.org/obo/GO_0003677 | denotes | DNA-binding |
T3225 | 310-324 | http://purl.obolibrary.org/obo/GO_0003677 | denotes | binding to DNA |
T3228 | 26-33 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T3229 | 310-317 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3205 | 71-84 | http://purl.obolibrary.org/obo/GO_0071159 | denotes | NF-κB complex |
T3206 | 273-286 | http://purl.obolibrary.org/obo/GO_0071159 | denotes | NF-κB complex |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1431 | 35-227 | Sentence | denotes | The transcriptional activity of the NF-κB complex depends on dimer composition since C-terminal unrelated transcriptional activation domains are present exclusively in p65, RelB and c-Rel (2). |
T1432 | 228-329 | Sentence | denotes | Inhibitors of NF-κB (IκB) associate with the NF-κB complex and interfere with its binding to DNA (3). |
T13 | 35-227 | Sentence | denotes | The transcriptional activity of the NF-κB complex depends on dimer composition since C-terminal unrelated transcriptional activation domains are present exclusively in p65, RelB and c-Rel (2). |
T14 | 228-329 | Sentence | denotes | Inhibitors of NF-κB (IκB) associate with the NF-κB complex and interfere with its binding to DNA (3). |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4055 | 5-17 | Binding | denotes | dimerization |
T4056 | 5-17 | Binding | denotes | dimerization |
T4057 | 5-17 | Binding | denotes | dimerization |
T4058 | 5-17 | Binding | denotes | dimerization |
T4059 | 5-17 | Binding | denotes | dimerization |
T4060 | 26-33 | Binding | denotes | binding |
T4061 | 26-33 | Binding | denotes | binding |
T4062 | 26-33 | Binding | denotes | binding |
T4063 | 26-33 | Binding | denotes | binding |
T4064 | 26-33 | Binding | denotes | binding |
T4065 | 203-206 | Protein | denotes | p65 |
T4066 | 208-212 | Protein | denotes | RelB |
T4067 | 217-222 | Protein | denotes | c-Rel |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4193 | 71-84 | Protein | denotes | NF-κB complex |
T4194 | 203-206 | Protein | denotes | p65 |
T4195 | 208-212 | Protein | denotes | RelB |
T4196 | 242-247 | Protein | denotes | NF-κB |
T4197 | 249-252 | Protein | denotes | IκB |
T4198 | 273-278 | Protein | denotes | NF-κB |
T4199 | 228-238 | Negative_regulation | denotes | Inhibitors |
T4200 | 228-238 | Negative_regulation | denotes | Inhibitors |
T4201 | 254-263 | Binding | denotes | associate |
T4202 | 310-317 | Binding | denotes | binding |
T4203 | 310-317 | Binding | denotes | binding |
R3781 | T4196 | T4199 | themeOf | NF-κB,Inhibitors |
R3782 | T4196 | T4201 | themeOf | NF-κB,associate |
R3783 | T4196 | T4202 | themeOf | NF-κB,binding |
R3784 | T4197 | T4200 | themeOf | IκB,Inhibitors |
R3785 | T4197 | T4203 | themeOf | IκB,binding |
R3786 | T4198 | T4201 | themeOf | NF-κB,associate |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1145 | 26-33 | Binding | denotes | binding |
T1146 | 203-206 | Protein | denotes | p65 |
T1147 | 208-212 | Protein | denotes | RelB |
T1148 | 217-222 | Protein | denotes | c-Rel |
T1149 | 310-317 | Binding | denotes | binding |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1300 | 5-17 | Binding | denotes | dimerization |
T1301 | 5-17 | Binding | denotes | dimerization |
T1302 | 5-17 | Binding | denotes | dimerization |
T1303 | 5-17 | Binding | denotes | dimerization |
T1304 | 5-17 | Binding | denotes | dimerization |
T1305 | 26-33 | Binding | denotes | binding |
T1306 | 26-33 | Binding | denotes | binding |
T1307 | 26-33 | Binding | denotes | binding |
T1308 | 26-33 | Binding | denotes | binding |
T1309 | 26-33 | Binding | denotes | binding |
T1310 | 203-206 | Protein | denotes | p65 |
T1311 | 208-212 | Protein | denotes | RelB |
T1312 | 217-222 | Protein | denotes | c-Rel |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2254 | 203-206 | Q04206 | denotes | p65 |
T2255 | 203-206 | P21579 | denotes | p65 |
T2256 | 208-212 | Q01201 | denotes | RelB |
T2257 | 217-222 | Q04864 | denotes | c-Rel |
T2258 | 219-222 | Q04864 | denotes | Rel |