PMC:3320587 / 733-978
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T323 | 235-238 | NN | denotes | MTb |
| T322 | 232-234 | IN | denotes | by |
| T321 | 220-231 | NN | denotes | replication |
| T320 | 214-219 | NN | denotes | HIV-1 |
| T319 | 211-213 | IN | denotes | of |
| T318 | 201-210 | NN | denotes | induction |
| T317 | 192-200 | JJ | denotes | efficent |
| T316 | 188-191 | IN | denotes | for |
| T315 | 179-187 | VB | denotes | required |
| T314 | 176-178 | VB | denotes | is |
| T313 | 169-175 | NN | denotes | clones |
| T312 | 159-168 | JJ | denotes | molecular |
| T311 | 157-158 | NN | denotes | C |
| T310 | 149-156 | NN | denotes | subtype |
| T309 | 145-148 | CC | denotes | and |
| T308 | 143-144 | NN | denotes | B |
| T307 | 135-142 | NN | denotes | subtype |
| T306 | 129-134 | NN | denotes | HIV-1 |
| T305 | 119-128 | JJ | denotes | R5-tropic |
| T304 | 116-118 | IN | denotes | of |
| T303 | 107-115 | NN | denotes | promoter |
| T302 | 101-106 | JJ | denotes | viral |
| T301 | 97-100 | DT | denotes | the |
| T300 | 94-96 | IN | denotes | in |
| T299 | 89-93 | NN | denotes | site |
| T298 | 81-88 | NN | denotes | binding |
| T297 | 75-80 | NN | denotes | NFAT5 |
| T296 | 68-74 | JJ | denotes | intact |
| T295 | 65-67 | DT | denotes | an |
| T294 | 60-64 | IN | denotes | that |
| T293 | 56-59 | CC | denotes | and |
| T292 | 54-55 | -COMMA- | denotes | , |
| T291 | 48-54 | NN | denotes | ligand |
| T290 | 46-47 | -RRB- | denotes | ) |
| T289 | 43-46 | NN | denotes | TLR |
| T288 | 42-43 | -LRB- | denotes | ( |
| T287 | 33-41 | NN | denotes | receptor |
| T286 | 23-32 | JJ | denotes | Toll-like |
| T285 | 21-22 | DT | denotes | a |
| T284 | 18-20 | VB | denotes | is |
| T283 | 12-17 | WDT | denotes | which |
| T282 | 10-11 | -COMMA- | denotes | , |
| T281 | 7-10 | NN | denotes | MTb |
| T280 | 4-6 | IN | denotes | by |
| R110 | T281 | T280 | arg2Of | MTb,by |
| R111 | T281 | T282 | arg1Of | MTb,"," |
| R112 | T281 | T283 | arg1Of | MTb,which |
| R113 | T281 | T284 | arg1Of | MTb,is |
| R114 | T289 | T288 | arg2Of | TLR,( |
| R115 | T290 | T288 | arg3Of | ),( |
| R116 | T291 | T284 | arg2Of | ligand,is |
| R117 | T291 | T285 | arg1Of | ligand,a |
| R118 | T291 | T286 | arg1Of | ligand,Toll-like |
| R119 | T291 | T287 | arg1Of | ligand,receptor |
| R120 | T291 | T288 | arg1Of | ligand,( |
| R122 | T293 | T292 | arg1Of | and,"," |
| R123 | T294 | T293 | arg2Of | that,and |
| R124 | T299 | T295 | arg1Of | site,an |
| R125 | T299 | T296 | arg1Of | site,intact |
| R126 | T299 | T297 | arg1Of | site,NFAT5 |
| R127 | T299 | T298 | arg1Of | site,binding |
| R128 | T299 | T300 | arg1Of | site,in |
| R129 | T299 | T314 | arg1Of | site,is |
| R130 | T299 | T315 | arg2Of | site,required |
| R131 | T303 | T300 | arg2Of | promoter,in |
| R132 | T303 | T301 | arg1Of | promoter,the |
| R133 | T303 | T302 | arg1Of | promoter,viral |
| R134 | T303 | T304 | arg1Of | promoter,of |
| R135 | T308 | T309 | arg1Of | B,and |
| R136 | T310 | T309 | arg2Of | subtype,and |
| R137 | T313 | T304 | arg2Of | clones,of |
| R138 | T313 | T305 | arg1Of | clones,R5-tropic |
| R139 | T313 | T306 | arg1Of | clones,HIV-1 |
| R140 | T313 | T307 | arg1Of | clones,subtype |
| R141 | T313 | T308 | arg1Of | clones,B |
| R142 | T313 | T310 | arg1Of | clones,subtype |
| R143 | T313 | T311 | arg1Of | clones,C |
| R144 | T313 | T312 | arg1Of | clones,molecular |
| R145 | T315 | T294 | arg2Of | required,that |
| R146 | T315 | T314 | arg2Of | required,is |
| R147 | T315 | T316 | arg1Of | required,for |
| R148 | T318 | T316 | arg2Of | induction,for |
| R149 | T318 | T317 | arg1Of | induction,efficent |
| R150 | T318 | T319 | arg1Of | induction,of |
| R151 | T318 | T322 | arg1Of | induction,by |
| R152 | T321 | T319 | arg2Of | replication,of |
| R153 | T321 | T320 | arg1Of | replication,HIV-1 |
| R154 | T323 | T322 | arg2Of | MTb,by |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T414 | 75-80 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T117 | 48-54 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | ligand |
| T118 | 81-88 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T456 | 179-187 | Positive_regulation | denotes | required |
| T457 | 201-210 | Positive_regulation | denotes | induction |
| R519 | T457 | T456 | themeOf | induction,required |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T823 | 65-93 | Binding | denotes | an intact NFAT5 binding site |
| T810 | 4-10 | Protein | denotes | by MTb |
| T780 | 23-55 | Entity | denotes | Toll-like receptor (TLR) ligand, |
| T782 | 97-142 | Entity | denotes | the viral promoter of R5-tropic HIV-1 subtype |
| T787 | 232-238 | Protein | denotes | by MTb |
| T788 | 75-80 | Protein | denotes | NFAT5 |
| T790 | 65-93 | Entity | denotes | an intact NFAT5 binding site |
| T796 | 23-47 | Protein | denotes | Toll-like receptor (TLR) |
| R600 | T790 | T823 | themeOf | an intact NFAT5 binding site,an intact NFAT5 binding site |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T647 | 143-144 | NNP | denotes | B |
| T646 | 135-142 | NN | denotes | subtype |
| T645 | 129-134 | NN | denotes | HIV-1 |
| T644 | 119-128 | JJ | denotes | R5-tropic |
| T643 | 116-118 | IN | denotes | of |
| T642 | 107-115 | NN | denotes | promoter |
| T641 | 101-106 | JJ | denotes | viral |
| T640 | 97-100 | DT | denotes | the |
| T639 | 94-96 | IN | denotes | in |
| T638 | 89-93 | NN | denotes | site |
| T637 | 81-88 | JJ | denotes | binding |
| T636 | 75-80 | NNP | denotes | NFAT5 |
| T635 | 68-74 | JJ | denotes | intact |
| T634 | 65-67 | DT | denotes | an |
| T633 | 60-64 | IN | denotes | that |
| T632 | 56-59 | CC | denotes | and |
| T631 | 54-55 | , | denotes | , |
| T630 | 48-54 | NN | denotes | ligand |
| T629 | 46-47 | -RRB- | denotes | ) |
| T628 | 43-46 | NNP | denotes | TLR |
| T627 | 42-43 | -LRB- | denotes | ( |
| T626 | 33-41 | NN | denotes | receptor |
| T625 | 23-32 | JJ | denotes | Toll-like |
| T624 | 21-22 | DT | denotes | a |
| T623 | 18-20 | VBZ | denotes | is |
| T622 | 12-17 | WDT | denotes | which |
| T621 | 10-11 | , | denotes | , |
| T620 | 7-10 | NNP | denotes | MTb |
| T619 | 4-6 | IN | denotes | by |
| T648 | 145-148 | CC | denotes | and |
| T649 | 149-156 | JJ | denotes | subtype |
| T650 | 157-158 | NNP | denotes | C |
| T651 | 159-168 | JJ | denotes | molecular |
| T652 | 169-175 | NNS | denotes | clones |
| T653 | 176-178 | VBZ | denotes | is |
| T654 | 179-187 | VBN | denotes | required |
| T655 | 188-191 | IN | denotes | for |
| T656 | 192-200 | JJ | denotes | efficent |
| T657 | 201-210 | NN | denotes | induction |
| T658 | 211-213 | IN | denotes | of |
| T659 | 214-219 | JJ | denotes | HIV-1 |
| T660 | 220-231 | NN | denotes | replication |
| T661 | 232-234 | IN | denotes | by |
| T662 | 235-238 | NNP | denotes | MTb |
| T663 | 238-239 | . | denotes | . |
| R354 | T620 | T619 | pobj | MTb,by |
| R355 | T621 | T620 | punct | ",",MTb |
| R356 | T622 | T623 | nsubj | which,is |
| R357 | T623 | T620 | relcl | is,MTb |
| R358 | T624 | T626 | det | a,receptor |
| R359 | T625 | T626 | amod | Toll-like,receptor |
| R360 | T626 | T623 | attr | receptor,is |
| R361 | T627 | T628 | punct | (,TLR |
| R362 | T628 | T623 | npadvmod | TLR,is |
| R365 | T631 | T630 | punct | ",",ligand |
| R367 | T633 | T654 | mark | that,required |
| R368 | T634 | T638 | det | an,site |
| R369 | T635 | T638 | amod | intact,site |
| R370 | T636 | T638 | nmod | NFAT5,site |
| R371 | T637 | T638 | amod | binding,site |
| R372 | T638 | T654 | nsubjpass | site,required |
| R373 | T639 | T638 | prep | in,site |
| R374 | T640 | T642 | det | the,promoter |
| R375 | T641 | T642 | amod | viral,promoter |
| R376 | T642 | T639 | pobj | promoter,in |
| R377 | T643 | T642 | prep | of,promoter |
| R378 | T644 | T647 | nmod | R5-tropic,B |
| R379 | T645 | T647 | nmod | HIV-1,B |
| R380 | T646 | T647 | compound | subtype,B |
| R381 | T647 | T652 | nmod | B,clones |
| R546 | T648 | T647 | cc | and,B |
| R547 | T649 | T652 | amod | subtype,clones |
| R548 | T650 | T652 | nmod | C,clones |
| R549 | T651 | T652 | amod | molecular,clones |
| R550 | T652 | T643 | pobj | clones,of |
| R551 | T653 | T654 | auxpass | is,required |
| R553 | T655 | T654 | prep | for,required |
| R554 | T656 | T657 | amod | efficent,induction |
| R555 | T657 | T655 | pobj | induction,for |
| R556 | T658 | T657 | prep | of,induction |
| R557 | T659 | T660 | compound | HIV-1,replication |
| R558 | T660 | T658 | pobj | replication,of |
| R559 | T661 | T657 | prep | by,induction |
| R560 | T662 | T661 | pobj | MTb,by |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T132 | 75-93 | Protein | denotes | NFAT5 binding site |