PMC:3320587 / 722-1007
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T329 | 282-284 | IN | denotes | of |
T328 | 277-281 | NN | denotes | RNAi |
T327 | 274-276 | IN | denotes | by |
T326 | 264-273 | NN | denotes | silencing |
T325 | 262-263 | -COMMA- | denotes | , |
T324 | 251-262 | RB | denotes | Furthermore |
T323 | 246-249 | NN | denotes | MTb |
T322 | 243-245 | IN | denotes | by |
T321 | 231-242 | NN | denotes | replication |
T320 | 225-230 | NN | denotes | HIV-1 |
T319 | 222-224 | IN | denotes | of |
T318 | 212-221 | NN | denotes | induction |
T317 | 203-211 | JJ | denotes | efficent |
T316 | 199-202 | IN | denotes | for |
T315 | 190-198 | VB | denotes | required |
T314 | 187-189 | VB | denotes | is |
T313 | 180-186 | NN | denotes | clones |
T312 | 170-179 | JJ | denotes | molecular |
T311 | 168-169 | NN | denotes | C |
T310 | 160-167 | NN | denotes | subtype |
T309 | 156-159 | CC | denotes | and |
T308 | 154-155 | NN | denotes | B |
T307 | 146-153 | NN | denotes | subtype |
T306 | 140-145 | NN | denotes | HIV-1 |
T305 | 130-139 | JJ | denotes | R5-tropic |
T304 | 127-129 | IN | denotes | of |
T303 | 118-126 | NN | denotes | promoter |
T302 | 112-117 | JJ | denotes | viral |
T301 | 108-111 | DT | denotes | the |
T300 | 105-107 | IN | denotes | in |
T299 | 100-104 | NN | denotes | site |
T298 | 92-99 | NN | denotes | binding |
T297 | 86-91 | NN | denotes | NFAT5 |
T296 | 79-85 | JJ | denotes | intact |
T295 | 76-78 | DT | denotes | an |
T294 | 71-75 | IN | denotes | that |
T293 | 67-70 | CC | denotes | and |
T292 | 65-66 | -COMMA- | denotes | , |
T291 | 59-65 | NN | denotes | ligand |
T290 | 57-58 | -RRB- | denotes | ) |
T289 | 54-57 | NN | denotes | TLR |
T288 | 53-54 | -LRB- | denotes | ( |
T287 | 44-52 | NN | denotes | receptor |
T286 | 34-43 | JJ | denotes | Toll-like |
T285 | 32-33 | DT | denotes | a |
T284 | 29-31 | VB | denotes | is |
T283 | 23-28 | WDT | denotes | which |
T282 | 21-22 | -COMMA- | denotes | , |
T281 | 18-21 | NN | denotes | MTb |
T280 | 15-17 | IN | denotes | by |
T279 | 7-14 | VB | denotes | induced |
R108 | T279 | T293 | arg1Of | induced,and |
R109 | T281 | T279 | arg1Of | MTb,induced |
R110 | T281 | T280 | arg2Of | MTb,by |
R111 | T281 | T282 | arg1Of | MTb,"," |
R112 | T281 | T283 | arg1Of | MTb,which |
R113 | T281 | T284 | arg1Of | MTb,is |
R114 | T289 | T288 | arg2Of | TLR,( |
R115 | T290 | T288 | arg3Of | ),( |
R116 | T291 | T284 | arg2Of | ligand,is |
R117 | T291 | T285 | arg1Of | ligand,a |
R118 | T291 | T286 | arg1Of | ligand,Toll-like |
R119 | T291 | T287 | arg1Of | ligand,receptor |
R120 | T291 | T288 | arg1Of | ligand,( |
R122 | T293 | T292 | arg1Of | and,"," |
R123 | T294 | T293 | arg2Of | that,and |
R124 | T299 | T295 | arg1Of | site,an |
R125 | T299 | T296 | arg1Of | site,intact |
R126 | T299 | T297 | arg1Of | site,NFAT5 |
R127 | T299 | T298 | arg1Of | site,binding |
R128 | T299 | T300 | arg1Of | site,in |
R129 | T299 | T314 | arg1Of | site,is |
R130 | T299 | T315 | arg2Of | site,required |
R131 | T303 | T300 | arg2Of | promoter,in |
R132 | T303 | T301 | arg1Of | promoter,the |
R133 | T303 | T302 | arg1Of | promoter,viral |
R134 | T303 | T304 | arg1Of | promoter,of |
R135 | T308 | T309 | arg1Of | B,and |
R136 | T310 | T309 | arg2Of | subtype,and |
R137 | T313 | T304 | arg2Of | clones,of |
R138 | T313 | T305 | arg1Of | clones,R5-tropic |
R139 | T313 | T306 | arg1Of | clones,HIV-1 |
R140 | T313 | T307 | arg1Of | clones,subtype |
R141 | T313 | T308 | arg1Of | clones,B |
R142 | T313 | T310 | arg1Of | clones,subtype |
R143 | T313 | T311 | arg1Of | clones,C |
R144 | T313 | T312 | arg1Of | clones,molecular |
R145 | T315 | T294 | arg2Of | required,that |
R146 | T315 | T314 | arg2Of | required,is |
R147 | T315 | T316 | arg1Of | required,for |
R148 | T318 | T316 | arg2Of | induction,for |
R149 | T318 | T317 | arg1Of | induction,efficent |
R150 | T318 | T319 | arg1Of | induction,of |
R151 | T318 | T322 | arg1Of | induction,by |
R152 | T321 | T319 | arg2Of | replication,of |
R153 | T321 | T320 | arg1Of | replication,HIV-1 |
R154 | T323 | T322 | arg2Of | MTb,by |
R155 | T326 | T327 | arg1Of | silencing,by |
R156 | T326 | T329 | arg1Of | silencing,of |
R158 | T328 | T327 | arg2Of | RNAi,by |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T414 | 86-91 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T105 | 277-281 | http://purl.obolibrary.org/obo/GO_0016246 | denotes | RNAi |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T117 | 59-65 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | ligand |
T118 | 92-99 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T769 | 7-14 | Positive_regulation | denotes | induced |
T771 | 264-273 | Negative_regulation | denotes | silencing |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T454 | 7-14 | Positive_regulation | denotes | induced |
T456 | 190-198 | Positive_regulation | denotes | required |
T457 | 212-221 | Positive_regulation | denotes | induction |
R519 | T457 | T456 | themeOf | induction,required |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T434 | 7-14 | Positive_regulation | denotes | induced |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T823 | 76-104 | Binding | denotes | an intact NFAT5 binding site |
T810 | 15-21 | Protein | denotes | by MTb |
T780 | 34-66 | Entity | denotes | Toll-like receptor (TLR) ligand, |
T782 | 108-153 | Entity | denotes | the viral promoter of R5-tropic HIV-1 subtype |
T787 | 243-249 | Protein | denotes | by MTb |
T788 | 86-91 | Protein | denotes | NFAT5 |
T790 | 76-104 | Entity | denotes | an intact NFAT5 binding site |
T796 | 34-58 | Protein | denotes | Toll-like receptor (TLR) |
R600 | T790 | T823 | themeOf | an intact NFAT5 binding site,an intact NFAT5 binding site |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T647 | 154-155 | NNP | denotes | B |
T646 | 146-153 | NN | denotes | subtype |
T645 | 140-145 | NN | denotes | HIV-1 |
T644 | 130-139 | JJ | denotes | R5-tropic |
T643 | 127-129 | IN | denotes | of |
T642 | 118-126 | NN | denotes | promoter |
T641 | 112-117 | JJ | denotes | viral |
T640 | 108-111 | DT | denotes | the |
T639 | 105-107 | IN | denotes | in |
T638 | 100-104 | NN | denotes | site |
T637 | 92-99 | JJ | denotes | binding |
T636 | 86-91 | NNP | denotes | NFAT5 |
T635 | 79-85 | JJ | denotes | intact |
T634 | 76-78 | DT | denotes | an |
T633 | 71-75 | IN | denotes | that |
T632 | 67-70 | CC | denotes | and |
T631 | 65-66 | , | denotes | , |
T630 | 59-65 | NN | denotes | ligand |
T629 | 57-58 | -RRB- | denotes | ) |
T628 | 54-57 | NNP | denotes | TLR |
T627 | 53-54 | -LRB- | denotes | ( |
T626 | 44-52 | NN | denotes | receptor |
T625 | 34-43 | JJ | denotes | Toll-like |
T624 | 32-33 | DT | denotes | a |
T623 | 29-31 | VBZ | denotes | is |
T622 | 23-28 | WDT | denotes | which |
T621 | 21-22 | , | denotes | , |
T620 | 18-21 | NNP | denotes | MTb |
T619 | 15-17 | IN | denotes | by |
T618 | 7-14 | VBN | denotes | induced |
T648 | 156-159 | CC | denotes | and |
T649 | 160-167 | JJ | denotes | subtype |
T650 | 168-169 | NNP | denotes | C |
T651 | 170-179 | JJ | denotes | molecular |
T652 | 180-186 | NNS | denotes | clones |
T653 | 187-189 | VBZ | denotes | is |
T654 | 190-198 | VBN | denotes | required |
T655 | 199-202 | IN | denotes | for |
T656 | 203-211 | JJ | denotes | efficent |
T657 | 212-221 | NN | denotes | induction |
T658 | 222-224 | IN | denotes | of |
T659 | 225-230 | JJ | denotes | HIV-1 |
T660 | 231-242 | NN | denotes | replication |
T661 | 243-245 | IN | denotes | by |
T662 | 246-249 | NNP | denotes | MTb |
T663 | 249-250 | . | denotes | . |
T664 | 251-262 | RB | denotes | Furthermore |
T665 | 262-263 | , | denotes | , |
T666 | 264-273 | VBG | denotes | silencing |
T667 | 274-276 | IN | denotes | by |
T668 | 277-281 | NNS | denotes | RNAi |
T669 | 282-284 | IN | denotes | of |
R353 | T619 | T618 | agent | by,induced |
R354 | T620 | T619 | pobj | MTb,by |
R355 | T621 | T620 | punct | ",",MTb |
R356 | T622 | T623 | nsubj | which,is |
R357 | T623 | T620 | relcl | is,MTb |
R358 | T624 | T626 | det | a,receptor |
R359 | T625 | T626 | amod | Toll-like,receptor |
R360 | T626 | T623 | attr | receptor,is |
R361 | T627 | T628 | punct | (,TLR |
R362 | T628 | T623 | npadvmod | TLR,is |
R363 | T629 | T618 | punct | ),induced |
R364 | T630 | T618 | conj | ligand,induced |
R365 | T631 | T630 | punct | ",",ligand |
R366 | T632 | T618 | cc | and,induced |
R367 | T633 | T654 | mark | that,required |
R368 | T634 | T638 | det | an,site |
R369 | T635 | T638 | amod | intact,site |
R370 | T636 | T638 | nmod | NFAT5,site |
R371 | T637 | T638 | amod | binding,site |
R372 | T638 | T654 | nsubjpass | site,required |
R373 | T639 | T638 | prep | in,site |
R374 | T640 | T642 | det | the,promoter |
R375 | T641 | T642 | amod | viral,promoter |
R376 | T642 | T639 | pobj | promoter,in |
R377 | T643 | T642 | prep | of,promoter |
R378 | T644 | T647 | nmod | R5-tropic,B |
R379 | T645 | T647 | nmod | HIV-1,B |
R380 | T646 | T647 | compound | subtype,B |
R381 | T647 | T652 | nmod | B,clones |
R546 | T648 | T647 | cc | and,B |
R547 | T649 | T652 | amod | subtype,clones |
R548 | T650 | T652 | nmod | C,clones |
R549 | T651 | T652 | amod | molecular,clones |
R550 | T652 | T643 | pobj | clones,of |
R551 | T653 | T654 | auxpass | is,required |
R552 | T654 | T618 | conj | required,induced |
R553 | T655 | T654 | prep | for,required |
R554 | T656 | T657 | amod | efficent,induction |
R555 | T657 | T655 | pobj | induction,for |
R556 | T658 | T657 | prep | of,induction |
R557 | T659 | T660 | compound | HIV-1,replication |
R558 | T660 | T658 | pobj | replication,of |
R559 | T661 | T657 | prep | by,induction |
R560 | T662 | T661 | pobj | MTb,by |
R565 | T667 | T666 | prep | by,silencing |
R566 | T668 | T667 | pobj | RNAi,by |
R567 | T669 | T668 | prep | of,RNAi |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T143 | 264-273 | Negative_regulation | denotes | silencing |
T142 | 264-273 | Negative_regulation | denotes | silencing |
T141 | 264-273 | Negative_regulation | denotes | silencing |
T135 | 7-14 | Positive_regulation | denotes | induced |
T134 | 7-14 | Positive_regulation | denotes | induced |
T132 | 86-104 | Protein | denotes | NFAT5 binding site |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25 | 264-273 | Negative_regulation | denotes | silencing |
T24 | 7-14 | Positive_regulation | denotes | induced |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T47 | 7-14 | Positive_regulation | denotes | induced |