PMC:3320587 / 699-1012
Annnotations
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T330","span":{"begin":308,"end":311},"obj":"JJ"},{"id":"T329","span":{"begin":305,"end":307},"obj":"IN"},{"id":"T328","span":{"begin":300,"end":304},"obj":"NN"},{"id":"T327","span":{"begin":297,"end":299},"obj":"IN"},{"id":"T326","span":{"begin":287,"end":296},"obj":"NN"},{"id":"T325","span":{"begin":285,"end":286},"obj":"-COMMA-"},{"id":"T324","span":{"begin":274,"end":285},"obj":"RB"},{"id":"T323","span":{"begin":269,"end":272},"obj":"NN"},{"id":"T322","span":{"begin":266,"end":268},"obj":"IN"},{"id":"T321","span":{"begin":254,"end":265},"obj":"NN"},{"id":"T320","span":{"begin":248,"end":253},"obj":"NN"},{"id":"T319","span":{"begin":245,"end":247},"obj":"IN"},{"id":"T318","span":{"begin":235,"end":244},"obj":"NN"},{"id":"T317","span":{"begin":226,"end":234},"obj":"JJ"},{"id":"T316","span":{"begin":222,"end":225},"obj":"IN"},{"id":"T315","span":{"begin":213,"end":221},"obj":"VB"},{"id":"T314","span":{"begin":210,"end":212},"obj":"VB"},{"id":"T313","span":{"begin":203,"end":209},"obj":"NN"},{"id":"T312","span":{"begin":193,"end":202},"obj":"JJ"},{"id":"T311","span":{"begin":191,"end":192},"obj":"NN"},{"id":"T310","span":{"begin":183,"end":190},"obj":"NN"},{"id":"T309","span":{"begin":179,"end":182},"obj":"CC"},{"id":"T308","span":{"begin":177,"end":178},"obj":"NN"},{"id":"T307","span":{"begin":169,"end":176},"obj":"NN"},{"id":"T306","span":{"begin":163,"end":168},"obj":"NN"},{"id":"T305","span":{"begin":153,"end":162},"obj":"JJ"},{"id":"T304","span":{"begin":150,"end":152},"obj":"IN"},{"id":"T303","span":{"begin":141,"end":149},"obj":"NN"},{"id":"T302","span":{"begin":135,"end":140},"obj":"JJ"},{"id":"T301","span":{"begin":131,"end":134},"obj":"DT"},{"id":"T300","span":{"begin":128,"end":130},"obj":"IN"},{"id":"T299","span":{"begin":123,"end":127},"obj":"NN"},{"id":"T298","span":{"begin":115,"end":122},"obj":"NN"},{"id":"T297","span":{"begin":109,"end":114},"obj":"NN"},{"id":"T296","span":{"begin":102,"end":108},"obj":"JJ"},{"id":"T295","span":{"begin":99,"end":101},"obj":"DT"},{"id":"T294","span":{"begin":94,"end":98},"obj":"IN"},{"id":"T293","span":{"begin":90,"end":93},"obj":"CC"},{"id":"T292","span":{"begin":88,"end":89},"obj":"-COMMA-"},{"id":"T291","span":{"begin":82,"end":88},"obj":"NN"},{"id":"T290","span":{"begin":80,"end":81},"obj":"-RRB-"},{"id":"T289","span":{"begin":77,"end":80},"obj":"NN"},{"id":"T288","span":{"begin":76,"end":77},"obj":"-LRB-"},{"id":"T287","span":{"begin":67,"end":75},"obj":"NN"},{"id":"T286","span":{"begin":57,"end":66},"obj":"JJ"},{"id":"T285","span":{"begin":55,"end":56},"obj":"DT"},{"id":"T284","span":{"begin":52,"end":54},"obj":"VB"},{"id":"T283","span":{"begin":46,"end":51},"obj":"WDT"},{"id":"T282","span":{"begin":44,"end":45},"obj":"-COMMA-"},{"id":"T281","span":{"begin":41,"end":44},"obj":"NN"},{"id":"T280","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T279","span":{"begin":30,"end":37},"obj":"VB"},{"id":"T278","span":{"begin":21,"end":29},"obj":"RB"},{"id":"T277","span":{"begin":17,"end":20},"obj":"VB"},{"id":"T276","span":{"begin":6,"end":16},"obj":"NN"}],"relations":[{"id":"R106","pred":"arg2Of","subj":"T279","obj":"T277"},{"id":"R107","pred":"arg1Of","subj":"T279","obj":"T278"},{"id":"R108","pred":"arg1Of","subj":"T279","obj":"T293"},{"id":"R109","pred":"arg1Of","subj":"T281","obj":"T279"},{"id":"R110","pred":"arg2Of","subj":"T281","obj":"T280"},{"id":"R111","pred":"arg1Of","subj":"T281","obj":"T282"},{"id":"R112","pred":"arg1Of","subj":"T281","obj":"T283"},{"id":"R113","pred":"arg1Of","subj":"T281","obj":"T284"},{"id":"R114","pred":"arg2Of","subj":"T289","obj":"T288"},{"id":"R115","pred":"arg3Of","subj":"T290","obj":"T288"},{"id":"R116","pred":"arg2Of","subj":"T291","obj":"T284"},{"id":"R117","pred":"arg1Of","subj":"T291","obj":"T285"},{"id":"R118","pred":"arg1Of","subj":"T291","obj":"T286"},{"id":"R119","pred":"arg1Of","subj":"T291","obj":"T287"},{"id":"R120","pred":"arg1Of","subj":"T291","obj":"T288"},{"id":"R122","pred":"arg1Of","subj":"T293","obj":"T292"},{"id":"R123","pred":"arg2Of","subj":"T294","obj":"T293"},{"id":"R124","pred":"arg1Of","subj":"T299","obj":"T295"},{"id":"R125","pred":"arg1Of","subj":"T299","obj":"T296"},{"id":"R126","pred":"arg1Of","subj":"T299","obj":"T297"},{"id":"R127","pred":"arg1Of","subj":"T299","obj":"T298"},{"id":"R128","pred":"arg1Of","subj":"T299","obj":"T300"},{"id":"R129","pred":"arg1Of","subj":"T299","obj":"T314"},{"id":"R130","pred":"arg2Of","subj":"T299","obj":"T315"},{"id":"R131","pred":"arg2Of","subj":"T303","obj":"T300"},{"id":"R132","pred":"arg1Of","subj":"T303","obj":"T301"},{"id":"R133","pred":"arg1Of","subj":"T303","obj":"T302"},{"id":"R134","pred":"arg1Of","subj":"T303","obj":"T304"},{"id":"R135","pred":"arg1Of","subj":"T308","obj":"T309"},{"id":"R136","pred":"arg2Of","subj":"T310","obj":"T309"},{"id":"R137","pred":"arg2Of","subj":"T313","obj":"T304"},{"id":"R138","pred":"arg1Of","subj":"T313","obj":"T305"},{"id":"R139","pred":"arg1Of","subj":"T313","obj":"T306"},{"id":"R140","pred":"arg1Of","subj":"T313","obj":"T307"},{"id":"R141","pred":"arg1Of","subj":"T313","obj":"T308"},{"id":"R142","pred":"arg1Of","subj":"T313","obj":"T310"},{"id":"R143","pred":"arg1Of","subj":"T313","obj":"T311"},{"id":"R144","pred":"arg1Of","subj":"T313","obj":"T312"},{"id":"R145","pred":"arg2Of","subj":"T315","obj":"T294"},{"id":"R146","pred":"arg2Of","subj":"T315","obj":"T314"},{"id":"R147","pred":"arg1Of","subj":"T315","obj":"T316"},{"id":"R148","pred":"arg2Of","subj":"T318","obj":"T316"},{"id":"R149","pred":"arg1Of","subj":"T318","obj":"T317"},{"id":"R150","pred":"arg1Of","subj":"T318","obj":"T319"},{"id":"R151","pred":"arg1Of","subj":"T318","obj":"T322"},{"id":"R152","pred":"arg2Of","subj":"T321","obj":"T319"},{"id":"R153","pred":"arg1Of","subj":"T321","obj":"T320"},{"id":"R154","pred":"arg2Of","subj":"T323","obj":"T322"},{"id":"R155","pred":"arg1Of","subj":"T326","obj":"T327"},{"id":"R156","pred":"arg1Of","subj":"T326","obj":"T329"},{"id":"R158","pred":"arg2Of","subj":"T328","obj":"T327"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T414","span":{"begin":109,"end":114},"obj":"http://www.uniprot.org/uniprot/O94916"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T105","span":{"begin":300,"end":304},"obj":"http://purl.obolibrary.org/obo/GO_0016246"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T117","span":{"begin":82,"end":88},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T118","span":{"begin":115,"end":122},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T769","span":{"begin":30,"end":37},"obj":"Positive_regulation"},{"id":"T770","span":{"begin":6,"end":16},"obj":"Gene_expression"},{"id":"T771","span":{"begin":287,"end":296},"obj":"Negative_regulation"}],"relations":[{"id":"R592","pred":"themeOf","subj":"T770","obj":"T769"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T454","span":{"begin":30,"end":37},"obj":"Positive_regulation"},{"id":"T455","span":{"begin":6,"end":16},"obj":"Gene_expression"},{"id":"T456","span":{"begin":213,"end":221},"obj":"Positive_regulation"},{"id":"T457","span":{"begin":235,"end":244},"obj":"Positive_regulation"}],"relations":[{"id":"R518","pred":"themeOf","subj":"T455","obj":"T454"},{"id":"R519","pred":"themeOf","subj":"T457","obj":"T456"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T434","span":{"begin":30,"end":37},"obj":"Positive_regulation"},{"id":"T433","span":{"begin":6,"end":16},"obj":"Gene_expression"}],"relations":[{"id":"R507","pred":"themeOf","subj":"T433","obj":"T434"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T823","span":{"begin":99,"end":127},"obj":"Binding"},{"id":"T810","span":{"begin":38,"end":44},"obj":"Protein"},{"id":"T780","span":{"begin":57,"end":89},"obj":"Entity"},{"id":"T782","span":{"begin":131,"end":176},"obj":"Entity"},{"id":"T787","span":{"begin":266,"end":272},"obj":"Protein"},{"id":"T788","span":{"begin":109,"end":114},"obj":"Protein"},{"id":"T790","span":{"begin":99,"end":127},"obj":"Entity"},{"id":"T796","span":{"begin":57,"end":81},"obj":"Protein"}],"relations":[{"id":"R600","pred":"themeOf","subj":"T790","obj":"T823"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T647","span":{"begin":177,"end":178},"obj":"NNP"},{"id":"T646","span":{"begin":169,"end":176},"obj":"NN"},{"id":"T645","span":{"begin":163,"end":168},"obj":"NN"},{"id":"T644","span":{"begin":153,"end":162},"obj":"JJ"},{"id":"T643","span":{"begin":150,"end":152},"obj":"IN"},{"id":"T642","span":{"begin":141,"end":149},"obj":"NN"},{"id":"T641","span":{"begin":135,"end":140},"obj":"JJ"},{"id":"T640","span":{"begin":131,"end":134},"obj":"DT"},{"id":"T639","span":{"begin":128,"end":130},"obj":"IN"},{"id":"T638","span":{"begin":123,"end":127},"obj":"NN"},{"id":"T637","span":{"begin":115,"end":122},"obj":"JJ"},{"id":"T636","span":{"begin":109,"end":114},"obj":"NNP"},{"id":"T635","span":{"begin":102,"end":108},"obj":"JJ"},{"id":"T634","span":{"begin":99,"end":101},"obj":"DT"},{"id":"T633","span":{"begin":94,"end":98},"obj":"IN"},{"id":"T632","span":{"begin":90,"end":93},"obj":"CC"},{"id":"T631","span":{"begin":88,"end":89},"obj":","},{"id":"T630","span":{"begin":82,"end":88},"obj":"NN"},{"id":"T629","span":{"begin":80,"end":81},"obj":"-RRB-"},{"id":"T628","span":{"begin":77,"end":80},"obj":"NNP"},{"id":"T627","span":{"begin":76,"end":77},"obj":"-LRB-"},{"id":"T626","span":{"begin":67,"end":75},"obj":"NN"},{"id":"T625","span":{"begin":57,"end":66},"obj":"JJ"},{"id":"T624","span":{"begin":55,"end":56},"obj":"DT"},{"id":"T623","span":{"begin":52,"end":54},"obj":"VBZ"},{"id":"T622","span":{"begin":46,"end":51},"obj":"WDT"},{"id":"T621","span":{"begin":44,"end":45},"obj":","},{"id":"T620","span":{"begin":41,"end":44},"obj":"NNP"},{"id":"T619","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T618","span":{"begin":30,"end":37},"obj":"VBN"},{"id":"T617","span":{"begin":21,"end":29},"obj":"RB"},{"id":"T616","span":{"begin":17,"end":20},"obj":"VBP"},{"id":"T615","span":{"begin":6,"end":16},"obj":"NN"},{"id":"T648","span":{"begin":179,"end":182},"obj":"CC"},{"id":"T649","span":{"begin":183,"end":190},"obj":"JJ"},{"id":"T650","span":{"begin":191,"end":192},"obj":"NNP"},{"id":"T651","span":{"begin":193,"end":202},"obj":"JJ"},{"id":"T652","span":{"begin":203,"end":209},"obj":"NNS"},{"id":"T653","span":{"begin":210,"end":212},"obj":"VBZ"},{"id":"T654","span":{"begin":213,"end":221},"obj":"VBN"},{"id":"T655","span":{"begin":222,"end":225},"obj":"IN"},{"id":"T656","span":{"begin":226,"end":234},"obj":"JJ"},{"id":"T657","span":{"begin":235,"end":244},"obj":"NN"},{"id":"T658","span":{"begin":245,"end":247},"obj":"IN"},{"id":"T659","span":{"begin":248,"end":253},"obj":"JJ"},{"id":"T660","span":{"begin":254,"end":265},"obj":"NN"},{"id":"T661","span":{"begin":266,"end":268},"obj":"IN"},{"id":"T662","span":{"begin":269,"end":272},"obj":"NNP"},{"id":"T663","span":{"begin":272,"end":273},"obj":"."},{"id":"T664","span":{"begin":274,"end":285},"obj":"RB"},{"id":"T665","span":{"begin":285,"end":286},"obj":","},{"id":"T666","span":{"begin":287,"end":296},"obj":"VBG"},{"id":"T667","span":{"begin":297,"end":299},"obj":"IN"},{"id":"T668","span":{"begin":300,"end":304},"obj":"NNS"},{"id":"T669","span":{"begin":305,"end":307},"obj":"IN"},{"id":"T670","span":{"begin":308,"end":311},"obj":"JJ"}],"relations":[{"id":"R350","pred":"auxpass","subj":"T616","obj":"T618"},{"id":"R351","pred":"advmod","subj":"T617","obj":"T618"},{"id":"R353","pred":"agent","subj":"T619","obj":"T618"},{"id":"R354","pred":"pobj","subj":"T620","obj":"T619"},{"id":"R355","pred":"punct","subj":"T621","obj":"T620"},{"id":"R356","pred":"nsubj","subj":"T622","obj":"T623"},{"id":"R357","pred":"relcl","subj":"T623","obj":"T620"},{"id":"R358","pred":"det","subj":"T624","obj":"T626"},{"id":"R359","pred":"amod","subj":"T625","obj":"T626"},{"id":"R360","pred":"attr","subj":"T626","obj":"T623"},{"id":"R361","pred":"punct","subj":"T627","obj":"T628"},{"id":"R362","pred":"npadvmod","subj":"T628","obj":"T623"},{"id":"R363","pred":"punct","subj":"T629","obj":"T618"},{"id":"R364","pred":"conj","subj":"T630","obj":"T618"},{"id":"R365","pred":"punct","subj":"T631","obj":"T630"},{"id":"R366","pred":"cc","subj":"T632","obj":"T618"},{"id":"R367","pred":"mark","subj":"T633","obj":"T654"},{"id":"R368","pred":"det","subj":"T634","obj":"T638"},{"id":"R369","pred":"amod","subj":"T635","obj":"T638"},{"id":"R370","pred":"nmod","subj":"T636","obj":"T638"},{"id":"R371","pred":"amod","subj":"T637","obj":"T638"},{"id":"R372","pred":"nsubjpass","subj":"T638","obj":"T654"},{"id":"R373","pred":"prep","subj":"T639","obj":"T638"},{"id":"R374","pred":"det","subj":"T640","obj":"T642"},{"id":"R375","pred":"amod","subj":"T641","obj":"T642"},{"id":"R376","pred":"pobj","subj":"T642","obj":"T639"},{"id":"R377","pred":"prep","subj":"T643","obj":"T642"},{"id":"R378","pred":"nmod","subj":"T644","obj":"T647"},{"id":"R379","pred":"nmod","subj":"T645","obj":"T647"},{"id":"R380","pred":"compound","subj":"T646","obj":"T647"},{"id":"R381","pred":"nmod","subj":"T647","obj":"T652"},{"id":"R546","pred":"cc","subj":"T648","obj":"T647"},{"id":"R547","pred":"amod","subj":"T649","obj":"T652"},{"id":"R548","pred":"nmod","subj":"T650","obj":"T652"},{"id":"R549","pred":"amod","subj":"T651","obj":"T652"},{"id":"R550","pred":"pobj","subj":"T652","obj":"T643"},{"id":"R551","pred":"auxpass","subj":"T653","obj":"T654"},{"id":"R552","pred":"conj","subj":"T654","obj":"T618"},{"id":"R553","pred":"prep","subj":"T655","obj":"T654"},{"id":"R554","pred":"amod","subj":"T656","obj":"T657"},{"id":"R555","pred":"pobj","subj":"T657","obj":"T655"},{"id":"R556","pred":"prep","subj":"T658","obj":"T657"},{"id":"R557","pred":"compound","subj":"T659","obj":"T660"},{"id":"R558","pred":"pobj","subj":"T660","obj":"T658"},{"id":"R559","pred":"prep","subj":"T661","obj":"T657"},{"id":"R560","pred":"pobj","subj":"T662","obj":"T661"},{"id":"R565","pred":"prep","subj":"T667","obj":"T666"},{"id":"R566","pred":"pobj","subj":"T668","obj":"T667"},{"id":"R567","pred":"prep","subj":"T669","obj":"T668"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T143","span":{"begin":287,"end":296},"obj":"Negative_regulation"},{"id":"T142","span":{"begin":287,"end":296},"obj":"Negative_regulation"},{"id":"T141","span":{"begin":287,"end":296},"obj":"Negative_regulation"},{"id":"T135","span":{"begin":30,"end":37},"obj":"Positive_regulation"},{"id":"T134","span":{"begin":30,"end":37},"obj":"Positive_regulation"},{"id":"T133","span":{"begin":6,"end":16},"obj":"Gene_expression"},{"id":"T132","span":{"begin":109,"end":127},"obj":"Protein"}],"relations":[{"id":"R22","pred":"themeOf","subj":"T133","obj":"T135"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
testone
{"project":"testone","denotations":[{"id":"T25","span":{"begin":287,"end":296},"obj":"Negative_regulation"},{"id":"T24","span":{"begin":30,"end":37},"obj":"Positive_regulation"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}
test3
{"project":"test3","denotations":[{"id":"T47","span":{"begin":30,"end":37},"obj":"Positive_regulation"}],"text":"otein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular clones is required for efficent induction of HIV-1 replication by MTb. Furthermore, silencing by RNAi of key c"}