PMC:3320587 / 657-902 JSONTXT

{"project":"pmc-enju-pas","denotations":[{"id":"T312","span":{"begin":235,"end":244},"obj":"JJ"},{"id":"T311","span":{"begin":233,"end":234},"obj":"NN"},{"id":"T310","span":{"begin":225,"end":232},"obj":"NN"},{"id":"T309","span":{"begin":221,"end":224},"obj":"CC"},{"id":"T308","span":{"begin":219,"end":220},"obj":"NN"},{"id":"T307","span":{"begin":211,"end":218},"obj":"NN"},{"id":"T306","span":{"begin":205,"end":210},"obj":"NN"},{"id":"T305","span":{"begin":195,"end":204},"obj":"JJ"},{"id":"T304","span":{"begin":192,"end":194},"obj":"IN"},{"id":"T303","span":{"begin":183,"end":191},"obj":"NN"},{"id":"T302","span":{"begin":177,"end":182},"obj":"JJ"},{"id":"T301","span":{"begin":173,"end":176},"obj":"DT"},{"id":"T300","span":{"begin":170,"end":172},"obj":"IN"},{"id":"T299","span":{"begin":165,"end":169},"obj":"NN"},{"id":"T298","span":{"begin":157,"end":164},"obj":"NN"},{"id":"T297","span":{"begin":151,"end":156},"obj":"NN"},{"id":"T296","span":{"begin":144,"end":150},"obj":"JJ"},{"id":"T295","span":{"begin":141,"end":143},"obj":"DT"},{"id":"T294","span":{"begin":136,"end":140},"obj":"IN"},{"id":"T293","span":{"begin":132,"end":135},"obj":"CC"},{"id":"T292","span":{"begin":130,"end":131},"obj":"-COMMA-"},{"id":"T291","span":{"begin":124,"end":130},"obj":"NN"},{"id":"T290","span":{"begin":122,"end":123},"obj":"-RRB-"},{"id":"T289","span":{"begin":119,"end":122},"obj":"NN"},{"id":"T288","span":{"begin":118,"end":119},"obj":"-LRB-"},{"id":"T287","span":{"begin":109,"end":117},"obj":"NN"},{"id":"T286","span":{"begin":99,"end":108},"obj":"JJ"},{"id":"T285","span":{"begin":97,"end":98},"obj":"DT"},{"id":"T284","span":{"begin":94,"end":96},"obj":"VB"},{"id":"T283","span":{"begin":88,"end":93},"obj":"WDT"},{"id":"T282","span":{"begin":86,"end":87},"obj":"-COMMA-"},{"id":"T281","span":{"begin":83,"end":86},"obj":"NN"},{"id":"T280","span":{"begin":80,"end":82},"obj":"IN"},{"id":"T279","span":{"begin":72,"end":79},"obj":"VB"},{"id":"T278","span":{"begin":63,"end":71},"obj":"RB"},{"id":"T277","span":{"begin":59,"end":62},"obj":"VB"},{"id":"T276","span":{"begin":48,"end":58},"obj":"NN"},{"id":"T275","span":{"begin":40,"end":47},"obj":"NN"},{"id":"T274","span":{"begin":36,"end":39},"obj":"CC"},{"id":"T273","span":{"begin":31,"end":35},"obj":"NN"},{"id":"T272","span":{"begin":25,"end":30},"obj":"NN"},{"id":"T271","span":{"begin":20,"end":24},"obj":"IN"},{"id":"T270","span":{"begin":15,"end":19},"obj":"VB"},{"id":"T269","span":{"begin":12,"end":14},"obj":"PRP"}],"relations":[{"id":"R98","pred":"arg1Of","subj":"T269","obj":"T270"},{"id":"R99","pred":"arg1Of","subj":"T273","obj":"T272"},{"id":"R100","pred":"arg1Of","subj":"T273","obj":"T274"},{"id":"R101","pred":"arg1Of","subj":"T274","obj":"T277"},{"id":"R102","pred":"arg2Of","subj":"T274","obj":"T279"},{"id":"R103","pred":"arg2Of","subj":"T276","obj":"T274"},{"id":"R104","pred":"arg1Of","subj":"T276","obj":"T275"},{"id":"R105","pred":"arg1Of","subj":"T279","obj":"T271"},{"id":"R106","pred":"arg2Of","subj":"T279","obj":"T277"},{"id":"R107","pred":"arg1Of","subj":"T279","obj":"T278"},{"id":"R108","pred":"arg1Of","subj":"T279","obj":"T293"},{"id":"R109","pred":"arg1Of","subj":"T281","obj":"T279"},{"id":"R110","pred":"arg2Of","subj":"T281","obj":"T280"},{"id":"R111","pred":"arg1Of","subj":"T281","obj":"T282"},{"id":"R112","pred":"arg1Of","subj":"T281","obj":"T283"},{"id":"R113","pred":"arg1Of","subj":"T281","obj":"T284"},{"id":"R114","pred":"arg2Of","subj":"T289","obj":"T288"},{"id":"R115","pred":"arg3Of","subj":"T290","obj":"T288"},{"id":"R116","pred":"arg2Of","subj":"T291","obj":"T284"},{"id":"R117","pred":"arg1Of","subj":"T291","obj":"T285"},{"id":"R118","pred":"arg1Of","subj":"T291","obj":"T286"},{"id":"R119","pred":"arg1Of","subj":"T291","obj":"T287"},{"id":"R120","pred":"arg1Of","subj":"T291","obj":"T288"},{"id":"R121","pred":"arg2Of","subj":"T293","obj":"T270"},{"id":"R122","pred":"arg1Of","subj":"T293","obj":"T292"},{"id":"R123","pred":"arg2Of","subj":"T294","obj":"T293"},{"id":"R124","pred":"arg1Of","subj":"T299","obj":"T295"},{"id":"R125","pred":"arg1Of","subj":"T299","obj":"T296"},{"id":"R126","pred":"arg1Of","subj":"T299","obj":"T297"},{"id":"R127","pred":"arg1Of","subj":"T299","obj":"T298"},{"id":"R128","pred":"arg1Of","subj":"T299","obj":"T300"},{"id":"R131","pred":"arg2Of","subj":"T303","obj":"T300"},{"id":"R132","pred":"arg1Of","subj":"T303","obj":"T301"},{"id":"R133","pred":"arg1Of","subj":"T303","obj":"T302"},{"id":"R134","pred":"arg1Of","subj":"T303","obj":"T304"},{"id":"R135","pred":"arg1Of","subj":"T308","obj":"T309"},{"id":"R136","pred":"arg2Of","subj":"T310","obj":"T309"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T88","span":{"begin":25,"end":30},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T413","span":{"begin":25,"end":30},"obj":"http://www.uniprot.org/uniprot/O94916"},{"id":"T414","span":{"begin":151,"end":156},"obj":"http://www.uniprot.org/uniprot/O94916"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"GO-MF","denotations":[{"id":"T117","span":{"begin":124,"end":130},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T118","span":{"begin":157,"end":164},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"simple1","denotations":[{"id":"T171","span":{"begin":25,"end":30},"obj":"Protein"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"BioNLP16_DUT","denotations":[{"id":"T758","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T769","span":{"begin":72,"end":79},"obj":"Positive_regulation"},{"id":"T770","span":{"begin":48,"end":58},"obj":"Gene_expression"}],"relations":[{"id":"R583","pred":"themeOf","subj":"T758","obj":"T769"},{"id":"R584","pred":"themeOf","subj":"T758","obj":"T770"},{"id":"R592","pred":"themeOf","subj":"T770","obj":"T769"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T444","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T454","span":{"begin":72,"end":79},"obj":"Positive_regulation"},{"id":"T455","span":{"begin":48,"end":58},"obj":"Gene_expression"}],"relations":[{"id":"R509","pred":"themeOf","subj":"T444","obj":"T454"},{"id":"R511","pred":"themeOf","subj":"T444","obj":"T455"},{"id":"R518","pred":"themeOf","subj":"T455","obj":"T454"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"DLUT931","denotations":[{"id":"T434","span":{"begin":72,"end":79},"obj":"Positive_regulation"},{"id":"T424","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T433","span":{"begin":48,"end":58},"obj":"Gene_expression"}],"relations":[{"id":"R502","pred":"themeOf","subj":"T424","obj":"T433"},{"id":"R503","pred":"themeOf","subj":"T424","obj":"T434"},{"id":"R507","pred":"themeOf","subj":"T433","obj":"T434"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T823","span":{"begin":141,"end":169},"obj":"Binding"},{"id":"T816","span":{"begin":40,"end":58},"obj":"Gene_expression"},{"id":"T810","span":{"begin":80,"end":86},"obj":"Protein"},{"id":"T809","span":{"begin":25,"end":35},"obj":"Protein"},{"id":"T780","span":{"begin":99,"end":131},"obj":"Entity"},{"id":"T782","span":{"begin":173,"end":218},"obj":"Entity"},{"id":"T788","span":{"begin":151,"end":156},"obj":"Protein"},{"id":"T790","span":{"begin":141,"end":169},"obj":"Entity"},{"id":"T796","span":{"begin":99,"end":123},"obj":"Protein"},{"id":"T800","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T806","span":{"begin":40,"end":47},"obj":"Protein"}],"relations":[{"id":"R606","pred":"themeOf","subj":"T806","obj":"T816"},{"id":"R600","pred":"themeOf","subj":"T790","obj":"T823"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T647","span":{"begin":219,"end":220},"obj":"NNP"},{"id":"T646","span":{"begin":211,"end":218},"obj":"NN"},{"id":"T645","span":{"begin":205,"end":210},"obj":"NN"},{"id":"T644","span":{"begin":195,"end":204},"obj":"JJ"},{"id":"T643","span":{"begin":192,"end":194},"obj":"IN"},{"id":"T642","span":{"begin":183,"end":191},"obj":"NN"},{"id":"T641","span":{"begin":177,"end":182},"obj":"JJ"},{"id":"T640","span":{"begin":173,"end":176},"obj":"DT"},{"id":"T639","span":{"begin":170,"end":172},"obj":"IN"},{"id":"T638","span":{"begin":165,"end":169},"obj":"NN"},{"id":"T637","span":{"begin":157,"end":164},"obj":"JJ"},{"id":"T636","span":{"begin":151,"end":156},"obj":"NNP"},{"id":"T635","span":{"begin":144,"end":150},"obj":"JJ"},{"id":"T634","span":{"begin":141,"end":143},"obj":"DT"},{"id":"T633","span":{"begin":136,"end":140},"obj":"IN"},{"id":"T632","span":{"begin":132,"end":135},"obj":"CC"},{"id":"T631","span":{"begin":130,"end":131},"obj":","},{"id":"T630","span":{"begin":124,"end":130},"obj":"NN"},{"id":"T629","span":{"begin":122,"end":123},"obj":"-RRB-"},{"id":"T628","span":{"begin":119,"end":122},"obj":"NNP"},{"id":"T627","span":{"begin":118,"end":119},"obj":"-LRB-"},{"id":"T626","span":{"begin":109,"end":117},"obj":"NN"},{"id":"T625","span":{"begin":99,"end":108},"obj":"JJ"},{"id":"T624","span":{"begin":97,"end":98},"obj":"DT"},{"id":"T623","span":{"begin":94,"end":96},"obj":"VBZ"},{"id":"T622","span":{"begin":88,"end":93},"obj":"WDT"},{"id":"T621","span":{"begin":86,"end":87},"obj":","},{"id":"T620","span":{"begin":83,"end":86},"obj":"NNP"},{"id":"T619","span":{"begin":80,"end":82},"obj":"IN"},{"id":"T618","span":{"begin":72,"end":79},"obj":"VBN"},{"id":"T617","span":{"begin":63,"end":71},"obj":"RB"},{"id":"T616","span":{"begin":59,"end":62},"obj":"VBP"},{"id":"T615","span":{"begin":48,"end":58},"obj":"NN"},{"id":"T614","span":{"begin":40,"end":47},"obj":"NN"},{"id":"T613","span":{"begin":36,"end":39},"obj":"CC"},{"id":"T612","span":{"begin":31,"end":35},"obj":"NN"},{"id":"T611","span":{"begin":25,"end":30},"obj":"CD"},{"id":"T610","span":{"begin":20,"end":24},"obj":"IN"},{"id":"T609","span":{"begin":15,"end":19},"obj":"VBP"},{"id":"T608","span":{"begin":12,"end":14},"obj":"PRP"},{"id":"T607","span":{"begin":10,"end":11},"obj":"."},{"id":"T648","span":{"begin":221,"end":224},"obj":"CC"},{"id":"T649","span":{"begin":225,"end":232},"obj":"JJ"},{"id":"T650","span":{"begin":233,"end":234},"obj":"NNP"},{"id":"T651","span":{"begin":235,"end":244},"obj":"JJ"}],"relations":[{"id":"R342","pred":"nsubj","subj":"T608","obj":"T609"},{"id":"R343","pred":"ROOT","subj":"T609","obj":"T609"},{"id":"R344","pred":"mark","subj":"T610","obj":"T618"},{"id":"R345","pred":"nsubjpass","subj":"T611","obj":"T618"},{"id":"R346","pred":"nsubjpass","subj":"T612","obj":"T618"},{"id":"R347","pred":"cc","subj":"T613","obj":"T612"},{"id":"R348","pred":"compound","subj":"T614","obj":"T615"},{"id":"R349","pred":"conj","subj":"T615","obj":"T612"},{"id":"R350","pred":"auxpass","subj":"T616","obj":"T618"},{"id":"R351","pred":"advmod","subj":"T617","obj":"T618"},{"id":"R352","pred":"ccomp","subj":"T618","obj":"T609"},{"id":"R353","pred":"agent","subj":"T619","obj":"T618"},{"id":"R354","pred":"pobj","subj":"T620","obj":"T619"},{"id":"R355","pred":"punct","subj":"T621","obj":"T620"},{"id":"R356","pred":"nsubj","subj":"T622","obj":"T623"},{"id":"R357","pred":"relcl","subj":"T623","obj":"T620"},{"id":"R358","pred":"det","subj":"T624","obj":"T626"},{"id":"R359","pred":"amod","subj":"T625","obj":"T626"},{"id":"R360","pred":"attr","subj":"T626","obj":"T623"},{"id":"R361","pred":"punct","subj":"T627","obj":"T628"},{"id":"R362","pred":"npadvmod","subj":"T628","obj":"T623"},{"id":"R363","pred":"punct","subj":"T629","obj":"T618"},{"id":"R364","pred":"conj","subj":"T630","obj":"T618"},{"id":"R365","pred":"punct","subj":"T631","obj":"T630"},{"id":"R366","pred":"cc","subj":"T632","obj":"T618"},{"id":"R368","pred":"det","subj":"T634","obj":"T638"},{"id":"R369","pred":"amod","subj":"T635","obj":"T638"},{"id":"R370","pred":"nmod","subj":"T636","obj":"T638"},{"id":"R371","pred":"amod","subj":"T637","obj":"T638"},{"id":"R373","pred":"prep","subj":"T639","obj":"T638"},{"id":"R374","pred":"det","subj":"T640","obj":"T642"},{"id":"R375","pred":"amod","subj":"T641","obj":"T642"},{"id":"R376","pred":"pobj","subj":"T642","obj":"T639"},{"id":"R377","pred":"prep","subj":"T643","obj":"T642"},{"id":"R378","pred":"nmod","subj":"T644","obj":"T647"},{"id":"R379","pred":"nmod","subj":"T645","obj":"T647"},{"id":"R380","pred":"compound","subj":"T646","obj":"T647"},{"id":"R546","pred":"cc","subj":"T648","obj":"T647"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T135","span":{"begin":72,"end":79},"obj":"Positive_regulation"},{"id":"T134","span":{"begin":72,"end":79},"obj":"Positive_regulation"},{"id":"T133","span":{"begin":48,"end":58},"obj":"Gene_expression"},{"id":"T132","span":{"begin":151,"end":169},"obj":"Protein"},{"id":"T131","span":{"begin":25,"end":35},"obj":"Protein"}],"relations":[{"id":"R22","pred":"themeOf","subj":"T133","obj":"T135"},{"id":"R20","pred":"themeOf","subj":"T131","obj":"T133"},{"id":"R21","pred":"themeOf","subj":"T131","obj":"T134"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"testone","denotations":[{"id":"T24","span":{"begin":72,"end":79},"obj":"Positive_regulation"},{"id":"T15","span":{"begin":25,"end":30},"obj":"Protein"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}

{"project":"test3","denotations":[{"id":"T35","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T47","span":{"begin":72,"end":79},"obj":"Positive_regulation"},{"id":"T46","span":{"begin":25,"end":30},"obj":"Protein"}],"relations":[{"id":"R12","pred":"themeOf","subj":"T46","obj":"T47"}],"text":"acrophages. We show that NFAT5 gene and protein expression are strongly induced by MTb, which is a Toll-like receptor (TLR) ligand, and that an intact NFAT5 binding site in the viral promoter of R5-tropic HIV-1 subtype B and subtype C molecular "}