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PMC:3320587 / 652-893 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T311 238-239 NN denotes C
T310 230-237 NN denotes subtype
T309 226-229 CC denotes and
T308 224-225 NN denotes B
T307 216-223 NN denotes subtype
T306 210-215 NN denotes HIV-1
T305 200-209 JJ denotes R5-tropic
T304 197-199 IN denotes of
T303 188-196 NN denotes promoter
T302 182-187 JJ denotes viral
T301 178-181 DT denotes the
T300 175-177 IN denotes in
T299 170-174 NN denotes site
T298 162-169 NN denotes binding
T297 156-161 NN denotes NFAT5
T296 149-155 JJ denotes intact
T295 146-148 DT denotes an
T294 141-145 IN denotes that
T293 137-140 CC denotes and
T292 135-136 -COMMA- denotes ,
T291 129-135 NN denotes ligand
T290 127-128 -RRB- denotes )
T289 124-127 NN denotes TLR
T288 123-124 -LRB- denotes (
T287 114-122 NN denotes receptor
T286 104-113 JJ denotes Toll-like
T285 102-103 DT denotes a
T284 99-101 VB denotes is
T283 93-98 WDT denotes which
T282 91-92 -COMMA- denotes ,
T281 88-91 NN denotes MTb
T280 85-87 IN denotes by
T279 77-84 VB denotes induced
T278 68-76 RB denotes strongly
T277 64-67 VB denotes are
T276 53-63 NN denotes expression
T275 45-52 NN denotes protein
T274 41-44 CC denotes and
T273 36-40 NN denotes gene
T272 30-35 NN denotes NFAT5
T271 25-29 IN denotes that
T270 20-24 VB denotes show
T269 17-19 PRP denotes We
T268 4-15 NN denotes macrophages
R98 T269 T270 arg1Of We,show
R99 T273 T272 arg1Of gene,NFAT5
R100 T273 T274 arg1Of gene,and
R101 T274 T277 arg1Of and,are
R102 T274 T279 arg2Of and,induced
R103 T276 T274 arg2Of expression,and
R104 T276 T275 arg1Of expression,protein
R105 T279 T271 arg1Of induced,that
R106 T279 T277 arg2Of induced,are
R107 T279 T278 arg1Of induced,strongly
R108 T279 T293 arg1Of induced,and
R109 T281 T279 arg1Of MTb,induced
R110 T281 T280 arg2Of MTb,by
R111 T281 T282 arg1Of MTb,","
R112 T281 T283 arg1Of MTb,which
R113 T281 T284 arg1Of MTb,is
R114 T289 T288 arg2Of TLR,(
R115 T290 T288 arg3Of ),(
R116 T291 T284 arg2Of ligand,is
R117 T291 T285 arg1Of ligand,a
R118 T291 T286 arg1Of ligand,Toll-like
R119 T291 T287 arg1Of ligand,receptor
R120 T291 T288 arg1Of ligand,(
R121 T293 T270 arg2Of and,show
R122 T293 T292 arg1Of and,","
R123 T294 T293 arg2Of that,and
R124 T299 T295 arg1Of site,an
R125 T299 T296 arg1Of site,intact
R126 T299 T297 arg1Of site,NFAT5
R127 T299 T298 arg1Of site,binding
R128 T299 T300 arg1Of site,in
R131 T303 T300 arg2Of promoter,in
R132 T303 T301 arg1Of promoter,the
R133 T303 T302 arg1Of promoter,viral
R134 T303 T304 arg1Of promoter,of
R135 T308 T309 arg1Of B,and
R136 T310 T309 arg2Of subtype,and

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T88 30-35 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T413 30-35 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T414 156-161 http://www.uniprot.org/uniprot/O94916 denotes NFAT5

GO-MF

Id Subject Object Predicate Lexical cue
T117 129-135 http://purl.obolibrary.org/obo/GO_0005488 denotes ligand
T118 162-169 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

simple1

Id Subject Object Predicate Lexical cue
T171 30-35 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T758 30-35 Protein denotes NFAT5
T769 77-84 Positive_regulation denotes induced
T770 53-63 Gene_expression denotes expression
R583 T758 T769 themeOf NFAT5,induced
R584 T758 T770 themeOf NFAT5,expression
R592 T770 T769 themeOf expression,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T444 30-35 Protein denotes NFAT5
T454 77-84 Positive_regulation denotes induced
T455 53-63 Gene_expression denotes expression
R509 T444 T454 themeOf NFAT5,induced
R511 T444 T455 themeOf NFAT5,expression
R518 T455 T454 themeOf expression,induced

DLUT931

Id Subject Object Predicate Lexical cue
T434 77-84 Positive_regulation denotes induced
T424 30-35 Protein denotes NFAT5
T433 53-63 Gene_expression denotes expression
R502 T424 T433 themeOf NFAT5,expression
R503 T424 T434 themeOf NFAT5,induced
R507 T433 T434 themeOf expression,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T823 146-174 Binding denotes an intact NFAT5 binding site
T816 45-63 Gene_expression denotes protein expression
T810 85-91 Protein denotes by MTb
T809 30-40 Protein denotes NFAT5 gene
T780 104-136 Entity denotes Toll-like receptor (TLR) ligand,
T782 178-223 Entity denotes the viral promoter of R5-tropic HIV-1 subtype
T788 156-161 Protein denotes NFAT5
T790 146-174 Entity denotes an intact NFAT5 binding site
T796 104-128 Protein denotes Toll-like receptor (TLR)
T800 30-35 Protein denotes NFAT5
T806 45-52 Protein denotes protein
R606 T806 T816 themeOf protein,protein expression
R600 T790 T823 themeOf an intact NFAT5 binding site,an intact NFAT5 binding site

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T647 224-225 NNP denotes B
T646 216-223 NN denotes subtype
T645 210-215 NN denotes HIV-1
T644 200-209 JJ denotes R5-tropic
T643 197-199 IN denotes of
T642 188-196 NN denotes promoter
T641 182-187 JJ denotes viral
T640 178-181 DT denotes the
T639 175-177 IN denotes in
T638 170-174 NN denotes site
T637 162-169 JJ denotes binding
T636 156-161 NNP denotes NFAT5
T635 149-155 JJ denotes intact
T634 146-148 DT denotes an
T633 141-145 IN denotes that
T632 137-140 CC denotes and
T631 135-136 , denotes ,
T630 129-135 NN denotes ligand
T629 127-128 -RRB- denotes )
T628 124-127 NNP denotes TLR
T627 123-124 -LRB- denotes (
T626 114-122 NN denotes receptor
T625 104-113 JJ denotes Toll-like
T624 102-103 DT denotes a
T623 99-101 VBZ denotes is
T622 93-98 WDT denotes which
T621 91-92 , denotes ,
T620 88-91 NNP denotes MTb
T619 85-87 IN denotes by
T618 77-84 VBN denotes induced
T617 68-76 RB denotes strongly
T616 64-67 VBP denotes are
T615 53-63 NN denotes expression
T614 45-52 NN denotes protein
T613 41-44 CC denotes and
T612 36-40 NN denotes gene
T611 30-35 CD denotes NFAT5
T610 25-29 IN denotes that
T609 20-24 VBP denotes show
T608 17-19 PRP denotes We
T607 15-16 . denotes .
T606 4-15 NNS denotes macrophages
T648 226-229 CC denotes and
T649 230-237 JJ denotes subtype
T650 238-239 NNP denotes C
R342 T608 T609 nsubj We,show
R343 T609 T609 ROOT show,show
R344 T610 T618 mark that,induced
R345 T611 T618 nsubjpass NFAT5,induced
R346 T612 T618 nsubjpass gene,induced
R347 T613 T612 cc and,gene
R348 T614 T615 compound protein,expression
R349 T615 T612 conj expression,gene
R350 T616 T618 auxpass are,induced
R351 T617 T618 advmod strongly,induced
R352 T618 T609 ccomp induced,show
R353 T619 T618 agent by,induced
R354 T620 T619 pobj MTb,by
R355 T621 T620 punct ",",MTb
R356 T622 T623 nsubj which,is
R357 T623 T620 relcl is,MTb
R358 T624 T626 det a,receptor
R359 T625 T626 amod Toll-like,receptor
R360 T626 T623 attr receptor,is
R361 T627 T628 punct (,TLR
R362 T628 T623 npadvmod TLR,is
R363 T629 T618 punct ),induced
R364 T630 T618 conj ligand,induced
R365 T631 T630 punct ",",ligand
R366 T632 T618 cc and,induced
R368 T634 T638 det an,site
R369 T635 T638 amod intact,site
R370 T636 T638 nmod NFAT5,site
R371 T637 T638 amod binding,site
R373 T639 T638 prep in,site
R374 T640 T642 det the,promoter
R375 T641 T642 amod viral,promoter
R376 T642 T639 pobj promoter,in
R377 T643 T642 prep of,promoter
R378 T644 T647 nmod R5-tropic,B
R379 T645 T647 nmod HIV-1,B
R380 T646 T647 compound subtype,B
R546 T648 T647 cc and,B

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T135 77-84 Positive_regulation denotes induced
T134 77-84 Positive_regulation denotes induced
T133 53-63 Gene_expression denotes expression
T132 156-174 Protein denotes NFAT5 binding site
T131 30-40 Protein denotes NFAT5 gene
R22 T133 T135 themeOf expression,induced
R20 T131 T133 themeOf NFAT5 gene,expression
R21 T131 T134 themeOf NFAT5 gene,induced

testone

Id Subject Object Predicate Lexical cue
T24 77-84 Positive_regulation denotes induced
T15 30-35 Protein denotes NFAT5

test3

Id Subject Object Predicate Lexical cue
T35 30-35 Protein denotes NFAT5
T47 77-84 Positive_regulation denotes induced
T46 30-35 Protein denotes NFAT5
R12 T46 T47 themeOf NFAT5,induced