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PMC:3320587 / 608-849 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T303 232-240 NN denotes promoter
T302 226-231 JJ denotes viral
T301 222-225 DT denotes the
T300 219-221 IN denotes in
T299 214-218 NN denotes site
T298 206-213 NN denotes binding
T297 200-205 NN denotes NFAT5
T296 193-199 JJ denotes intact
T295 190-192 DT denotes an
T294 185-189 IN denotes that
T293 181-184 CC denotes and
T292 179-180 -COMMA- denotes ,
T291 173-179 NN denotes ligand
T290 171-172 -RRB- denotes )
T289 168-171 NN denotes TLR
T288 167-168 -LRB- denotes (
T287 158-166 NN denotes receptor
T286 148-157 JJ denotes Toll-like
T285 146-147 DT denotes a
T284 143-145 VB denotes is
T283 137-142 WDT denotes which
T282 135-136 -COMMA- denotes ,
T281 132-135 NN denotes MTb
T280 129-131 IN denotes by
T279 121-128 VB denotes induced
T278 112-120 RB denotes strongly
T277 108-111 VB denotes are
T276 97-107 NN denotes expression
T275 89-96 NN denotes protein
T274 85-88 CC denotes and
T273 80-84 NN denotes gene
T272 74-79 NN denotes NFAT5
T271 69-73 IN denotes that
T270 64-68 VB denotes show
T269 61-63 PRP denotes We
T268 48-59 NN denotes macrophages
T267 36-47 JJ denotes co-infected
T266 33-35 IN denotes in
T265 21-32 NN denotes replication
T264 15-20 NN denotes HIV-1
T263 3-14 JJ denotes -stimulated
T262 2-3 -RRB- denotes )
R93 T265 T263 arg1Of replication,-stimulated
R94 T265 T264 arg1Of replication,HIV-1
R95 T265 T266 arg1Of replication,in
R96 T268 T266 arg2Of macrophages,in
R97 T268 T267 arg1Of macrophages,co-infected
R98 T269 T270 arg1Of We,show
R99 T273 T272 arg1Of gene,NFAT5
R100 T273 T274 arg1Of gene,and
R101 T274 T277 arg1Of and,are
R102 T274 T279 arg2Of and,induced
R103 T276 T274 arg2Of expression,and
R104 T276 T275 arg1Of expression,protein
R105 T279 T271 arg1Of induced,that
R106 T279 T277 arg2Of induced,are
R107 T279 T278 arg1Of induced,strongly
R108 T279 T293 arg1Of induced,and
R109 T281 T279 arg1Of MTb,induced
R110 T281 T280 arg2Of MTb,by
R111 T281 T282 arg1Of MTb,","
R112 T281 T283 arg1Of MTb,which
R113 T281 T284 arg1Of MTb,is
R114 T289 T288 arg2Of TLR,(
R115 T290 T288 arg3Of ),(
R116 T291 T284 arg2Of ligand,is
R117 T291 T285 arg1Of ligand,a
R118 T291 T286 arg1Of ligand,Toll-like
R119 T291 T287 arg1Of ligand,receptor
R120 T291 T288 arg1Of ligand,(
R121 T293 T270 arg2Of and,show
R122 T293 T292 arg1Of and,","
R123 T294 T293 arg2Of that,and
R124 T299 T295 arg1Of site,an
R125 T299 T296 arg1Of site,intact
R126 T299 T297 arg1Of site,NFAT5
R127 T299 T298 arg1Of site,binding
R128 T299 T300 arg1Of site,in
R131 T303 T300 arg2Of promoter,in
R132 T303 T301 arg1Of promoter,the
R133 T303 T302 arg1Of promoter,viral

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T88 74-79 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T413 74-79 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T414 200-205 http://www.uniprot.org/uniprot/O94916 denotes NFAT5

GO-MF

Id Subject Object Predicate Lexical cue
T117 173-179 http://purl.obolibrary.org/obo/GO_0005488 denotes ligand
T118 206-213 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

simple1

Id Subject Object Predicate Lexical cue
T171 74-79 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T758 74-79 Protein denotes NFAT5
T769 121-128 Positive_regulation denotes induced
T770 97-107 Gene_expression denotes expression
R583 T758 T769 themeOf NFAT5,induced
R584 T758 T770 themeOf NFAT5,expression
R592 T770 T769 themeOf expression,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T444 74-79 Protein denotes NFAT5
T454 121-128 Positive_regulation denotes induced
T455 97-107 Gene_expression denotes expression
R509 T444 T454 themeOf NFAT5,induced
R511 T444 T455 themeOf NFAT5,expression
R518 T455 T454 themeOf expression,induced

DLUT931

Id Subject Object Predicate Lexical cue
T434 121-128 Positive_regulation denotes induced
T424 74-79 Protein denotes NFAT5
T433 97-107 Gene_expression denotes expression
R502 T424 T433 themeOf NFAT5,expression
R503 T424 T434 themeOf NFAT5,induced
R507 T433 T434 themeOf expression,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T823 190-218 Binding denotes an intact NFAT5 binding site
T816 89-107 Gene_expression denotes protein expression
T810 129-135 Protein denotes by MTb
T809 74-84 Protein denotes NFAT5 gene
T780 148-180 Entity denotes Toll-like receptor (TLR) ligand,
T786 36-59 Entity denotes co-infected macrophages
T788 200-205 Protein denotes NFAT5
T790 190-218 Entity denotes an intact NFAT5 binding site
T796 148-172 Protein denotes Toll-like receptor (TLR)
T800 74-79 Protein denotes NFAT5
T806 89-96 Protein denotes protein
R606 T806 T816 themeOf protein,protein expression
R600 T790 T823 themeOf an intact NFAT5 binding site,an intact NFAT5 binding site

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T642 232-240 NN denotes promoter
T641 226-231 JJ denotes viral
T640 222-225 DT denotes the
T639 219-221 IN denotes in
T638 214-218 NN denotes site
T637 206-213 JJ denotes binding
T636 200-205 NNP denotes NFAT5
T635 193-199 JJ denotes intact
T634 190-192 DT denotes an
T633 185-189 IN denotes that
T632 181-184 CC denotes and
T631 179-180 , denotes ,
T630 173-179 NN denotes ligand
T629 171-172 -RRB- denotes )
T628 168-171 NNP denotes TLR
T627 167-168 -LRB- denotes (
T626 158-166 NN denotes receptor
T625 148-157 JJ denotes Toll-like
T624 146-147 DT denotes a
T623 143-145 VBZ denotes is
T622 137-142 WDT denotes which
T621 135-136 , denotes ,
T620 132-135 NNP denotes MTb
T619 129-131 IN denotes by
T618 121-128 VBN denotes induced
T617 112-120 RB denotes strongly
T616 108-111 VBP denotes are
T615 97-107 NN denotes expression
T614 89-96 NN denotes protein
T613 85-88 CC denotes and
T612 80-84 NN denotes gene
T611 74-79 CD denotes NFAT5
T610 69-73 IN denotes that
T609 64-68 VBP denotes show
T608 61-63 PRP denotes We
T607 59-60 . denotes .
T606 48-59 NNS denotes macrophages
T605 36-47 JJ denotes co-infected
T604 33-35 IN denotes in
T603 21-32 NN denotes replication
T602 15-20 NNP denotes HIV-1
T601 4-14 VBN denotes stimulated
T600 3-4 : denotes -
T599 2-3 -RRB- denotes )
R336 T602 T603 compound HIV-1,replication
R337 T603 T601 dobj replication,stimulated
R338 T604 T603 prep in,replication
R339 T605 T606 amod co-infected,macrophages
R340 T606 T604 pobj macrophages,in
R342 T608 T609 nsubj We,show
R343 T609 T609 ROOT show,show
R344 T610 T618 mark that,induced
R345 T611 T618 nsubjpass NFAT5,induced
R346 T612 T618 nsubjpass gene,induced
R347 T613 T612 cc and,gene
R348 T614 T615 compound protein,expression
R349 T615 T612 conj expression,gene
R350 T616 T618 auxpass are,induced
R351 T617 T618 advmod strongly,induced
R352 T618 T609 ccomp induced,show
R353 T619 T618 agent by,induced
R354 T620 T619 pobj MTb,by
R355 T621 T620 punct ",",MTb
R356 T622 T623 nsubj which,is
R357 T623 T620 relcl is,MTb
R358 T624 T626 det a,receptor
R359 T625 T626 amod Toll-like,receptor
R360 T626 T623 attr receptor,is
R361 T627 T628 punct (,TLR
R362 T628 T623 npadvmod TLR,is
R363 T629 T618 punct ),induced
R364 T630 T618 conj ligand,induced
R365 T631 T630 punct ",",ligand
R366 T632 T618 cc and,induced
R368 T634 T638 det an,site
R369 T635 T638 amod intact,site
R370 T636 T638 nmod NFAT5,site
R371 T637 T638 amod binding,site
R373 T639 T638 prep in,site
R374 T640 T642 det the,promoter
R375 T641 T642 amod viral,promoter
R376 T642 T639 pobj promoter,in

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T135 121-128 Positive_regulation denotes induced
T134 121-128 Positive_regulation denotes induced
T133 97-107 Gene_expression denotes expression
T132 200-218 Protein denotes NFAT5 binding site
T131 74-84 Protein denotes NFAT5 gene
R22 T133 T135 themeOf expression,induced
R20 T131 T133 themeOf NFAT5 gene,expression
R21 T131 T134 themeOf NFAT5 gene,induced

testone

Id Subject Object Predicate Lexical cue
T24 121-128 Positive_regulation denotes induced
T15 74-79 Protein denotes NFAT5

test3

Id Subject Object Predicate Lexical cue
T35 74-79 Protein denotes NFAT5
T47 121-128 Positive_regulation denotes induced
T46 74-79 Protein denotes NFAT5
R12 T46 T47 themeOf NFAT5,induced