PMC:3320587 / 535-810
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T296 | 266-272 | JJ | denotes | intact |
| T295 | 263-265 | DT | denotes | an |
| T294 | 258-262 | IN | denotes | that |
| T293 | 254-257 | CC | denotes | and |
| T292 | 252-253 | -COMMA- | denotes | , |
| T291 | 246-252 | NN | denotes | ligand |
| T290 | 244-245 | -RRB- | denotes | ) |
| T289 | 241-244 | NN | denotes | TLR |
| T288 | 240-241 | -LRB- | denotes | ( |
| T287 | 231-239 | NN | denotes | receptor |
| T286 | 221-230 | JJ | denotes | Toll-like |
| T285 | 219-220 | DT | denotes | a |
| T284 | 216-218 | VB | denotes | is |
| T283 | 210-215 | WDT | denotes | which |
| T282 | 208-209 | -COMMA- | denotes | , |
| T281 | 205-208 | NN | denotes | MTb |
| T280 | 202-204 | IN | denotes | by |
| T279 | 194-201 | VB | denotes | induced |
| T278 | 185-193 | RB | denotes | strongly |
| T277 | 181-184 | VB | denotes | are |
| T276 | 170-180 | NN | denotes | expression |
| T275 | 162-169 | NN | denotes | protein |
| T274 | 158-161 | CC | denotes | and |
| T273 | 153-157 | NN | denotes | gene |
| T272 | 147-152 | NN | denotes | NFAT5 |
| T271 | 142-146 | IN | denotes | that |
| T270 | 137-141 | VB | denotes | show |
| T269 | 134-136 | PRP | denotes | We |
| T268 | 121-132 | NN | denotes | macrophages |
| T267 | 109-120 | JJ | denotes | co-infected |
| T266 | 106-108 | IN | denotes | in |
| T265 | 94-105 | NN | denotes | replication |
| T264 | 88-93 | NN | denotes | HIV-1 |
| T263 | 76-87 | JJ | denotes | -stimulated |
| T262 | 75-76 | -RRB- | denotes | ) |
| T261 | 72-75 | NN | denotes | MTb |
| T260 | 71-72 | -LRB- | denotes | ( |
| T259 | 58-70 | NN | denotes | tuberculosis |
| T258 | 44-57 | NN | denotes | Mycobacterium |
| T257 | 35-43 | VB | denotes | inhibits |
| T256 | 33-34 | -RRB- | denotes | ) |
| T255 | 29-33 | NN | denotes | RNAi |
| T254 | 28-29 | -LRB- | denotes | ( |
| T253 | 15-27 | NN | denotes | interference |
| T252 | 11-14 | NN | denotes | RNA |
| T251 | 8-10 | IN | denotes | by |
| T250 | 6-7 | -RRB- | denotes | ) |
| T249 | 1-6 | NN | denotes | NFAT5 |
| T248 | 0-1 | -LRB- | denotes | ( |
| R78 | T249 | T248 | arg2Of | NFAT5,( |
| R79 | T250 | T248 | arg3Of | ),( |
| R80 | T253 | T251 | arg2Of | interference,by |
| R81 | T253 | T252 | arg1Of | interference,RNA |
| R82 | T253 | T254 | arg1Of | interference,( |
| R83 | T255 | T254 | arg2Of | RNAi,( |
| R84 | T256 | T254 | arg3Of | ),( |
| R87 | T261 | T260 | arg2Of | MTb,( |
| R88 | T262 | T260 | arg3Of | ),( |
| R89 | T265 | T257 | arg2Of | replication,inhibits |
| R90 | T265 | T258 | arg1Of | replication,Mycobacterium |
| R91 | T265 | T259 | arg1Of | replication,tuberculosis |
| R92 | T265 | T260 | arg1Of | replication,( |
| R93 | T265 | T263 | arg1Of | replication,-stimulated |
| R94 | T265 | T264 | arg1Of | replication,HIV-1 |
| R95 | T265 | T266 | arg1Of | replication,in |
| R96 | T268 | T266 | arg2Of | macrophages,in |
| R97 | T268 | T267 | arg1Of | macrophages,co-infected |
| R98 | T269 | T270 | arg1Of | We,show |
| R99 | T273 | T272 | arg1Of | gene,NFAT5 |
| R100 | T273 | T274 | arg1Of | gene,and |
| R101 | T274 | T277 | arg1Of | and,are |
| R102 | T274 | T279 | arg2Of | and,induced |
| R103 | T276 | T274 | arg2Of | expression,and |
| R104 | T276 | T275 | arg1Of | expression,protein |
| R105 | T279 | T271 | arg1Of | induced,that |
| R106 | T279 | T277 | arg2Of | induced,are |
| R107 | T279 | T278 | arg1Of | induced,strongly |
| R108 | T279 | T293 | arg1Of | induced,and |
| R109 | T281 | T279 | arg1Of | MTb,induced |
| R110 | T281 | T280 | arg2Of | MTb,by |
| R111 | T281 | T282 | arg1Of | MTb,"," |
| R112 | T281 | T283 | arg1Of | MTb,which |
| R113 | T281 | T284 | arg1Of | MTb,is |
| R114 | T289 | T288 | arg2Of | TLR,( |
| R115 | T290 | T288 | arg3Of | ),( |
| R116 | T291 | T284 | arg2Of | ligand,is |
| R117 | T291 | T285 | arg1Of | ligand,a |
| R118 | T291 | T286 | arg1Of | ligand,Toll-like |
| R119 | T291 | T287 | arg1Of | ligand,receptor |
| R120 | T291 | T288 | arg1Of | ligand,( |
| R121 | T293 | T270 | arg2Of | and,show |
| R122 | T293 | T292 | arg1Of | and,"," |
| R123 | T294 | T293 | arg2Of | that,and |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T87 | 1-6 | Protein | denotes | NFAT5 |
| T88 | 147-152 | Protein | denotes | NFAT5 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T412 | 1-6 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
| T413 | 147-152 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T104 | 29-33 | http://purl.obolibrary.org/obo/GO_0016246 | denotes | RNAi |
| T103 | 11-27 | http://purl.obolibrary.org/obo/GO_0016246 | denotes | RNA interference |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T117 | 246-252 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | ligand |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T116 | 58-70 | http://purl.bioontology.org/ontology/ICD10/A15-A19.9 | denotes | tuberculosis |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T170 | 1-6 | Protein | denotes | NFAT5 |
| T171 | 147-152 | Protein | denotes | NFAT5 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T757 | 1-6 | Protein | denotes | NFAT5 |
| T758 | 147-152 | Protein | denotes | NFAT5 |
| T769 | 194-201 | Positive_regulation | denotes | induced |
| T770 | 170-180 | Gene_expression | denotes | expression |
| R583 | T758 | T769 | themeOf | NFAT5,induced |
| R584 | T758 | T770 | themeOf | NFAT5,expression |
| R592 | T770 | T769 | themeOf | expression,induced |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T443 | 1-6 | Protein | denotes | NFAT5 |
| T444 | 147-152 | Protein | denotes | NFAT5 |
| T454 | 194-201 | Positive_regulation | denotes | induced |
| T455 | 170-180 | Gene_expression | denotes | expression |
| R509 | T444 | T454 | themeOf | NFAT5,induced |
| R511 | T444 | T455 | themeOf | NFAT5,expression |
| R518 | T455 | T454 | themeOf | expression,induced |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T434 | 194-201 | Positive_regulation | denotes | induced |
| T423 | 1-6 | Protein | denotes | NFAT5 |
| T424 | 147-152 | Protein | denotes | NFAT5 |
| T433 | 170-180 | Gene_expression | denotes | expression |
| R502 | T424 | T433 | themeOf | NFAT5,expression |
| R503 | T424 | T434 | themeOf | NFAT5,induced |
| R507 | T433 | T434 | themeOf | expression,induced |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T816 | 162-180 | Gene_expression | denotes | protein expression |
| T810 | 202-208 | Protein | denotes | by MTb |
| T809 | 147-157 | Protein | denotes | NFAT5 gene |
| T780 | 221-253 | Entity | denotes | Toll-like receptor (TLR) ligand, |
| T786 | 109-132 | Entity | denotes | co-infected macrophages |
| T796 | 221-245 | Protein | denotes | Toll-like receptor (TLR) |
| T800 | 147-152 | Protein | denotes | NFAT5 |
| T803 | 1-6 | Protein | denotes | NFAT5 |
| T804 | 72-75 | Protein | denotes | MTb |
| T806 | 162-169 | Protein | denotes | protein |
| R606 | T806 | T816 | themeOf | protein,protein expression |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T635 | 266-272 | JJ | denotes | intact |
| T634 | 263-265 | DT | denotes | an |
| T633 | 258-262 | IN | denotes | that |
| T632 | 254-257 | CC | denotes | and |
| T631 | 252-253 | , | denotes | , |
| T630 | 246-252 | NN | denotes | ligand |
| T629 | 244-245 | -RRB- | denotes | ) |
| T628 | 241-244 | NNP | denotes | TLR |
| T627 | 240-241 | -LRB- | denotes | ( |
| T626 | 231-239 | NN | denotes | receptor |
| T625 | 221-230 | JJ | denotes | Toll-like |
| T624 | 219-220 | DT | denotes | a |
| T623 | 216-218 | VBZ | denotes | is |
| T622 | 210-215 | WDT | denotes | which |
| T621 | 208-209 | , | denotes | , |
| T620 | 205-208 | NNP | denotes | MTb |
| T619 | 202-204 | IN | denotes | by |
| T618 | 194-201 | VBN | denotes | induced |
| T617 | 185-193 | RB | denotes | strongly |
| T616 | 181-184 | VBP | denotes | are |
| T615 | 170-180 | NN | denotes | expression |
| T614 | 162-169 | NN | denotes | protein |
| T613 | 158-161 | CC | denotes | and |
| T612 | 153-157 | NN | denotes | gene |
| T611 | 147-152 | CD | denotes | NFAT5 |
| T610 | 142-146 | IN | denotes | that |
| T609 | 137-141 | VBP | denotes | show |
| T608 | 134-136 | PRP | denotes | We |
| T607 | 132-133 | . | denotes | . |
| T606 | 121-132 | NNS | denotes | macrophages |
| T605 | 109-120 | JJ | denotes | co-infected |
| T604 | 106-108 | IN | denotes | in |
| T603 | 94-105 | NN | denotes | replication |
| T602 | 88-93 | NNP | denotes | HIV-1 |
| T601 | 77-87 | VBN | denotes | stimulated |
| T600 | 76-77 | : | denotes | - |
| T599 | 75-76 | -RRB- | denotes | ) |
| T598 | 72-75 | NNP | denotes | MTb |
| T597 | 71-72 | -LRB- | denotes | ( |
| T596 | 58-70 | NN | denotes | tuberculosis |
| T595 | 44-57 | NNP | denotes | Mycobacterium |
| T594 | 35-43 | VBZ | denotes | inhibits |
| T593 | 33-34 | -RRB- | denotes | ) |
| T592 | 29-33 | NNS | denotes | RNAi |
| T591 | 28-29 | -LRB- | denotes | ( |
| T590 | 15-27 | NN | denotes | interference |
| T589 | 11-14 | NNP | denotes | RNA |
| T588 | 8-10 | IN | denotes | by |
| T585 | 0-1 | -LRB- | denotes | ( |
| T586 | 1-6 | CD | denotes | NFAT5 |
| T587 | 6-7 | -RRB- | denotes | ) |
| R323 | T589 | T590 | compound | RNA,interference |
| R324 | T590 | T588 | pobj | interference,by |
| R325 | T591 | T592 | punct | (,RNAi |
| R329 | T595 | T596 | compound | Mycobacterium,tuberculosis |
| R330 | T596 | T594 | dobj | tuberculosis,inhibits |
| R331 | T597 | T596 | punct | (,tuberculosis |
| R332 | T598 | T596 | appos | MTb,tuberculosis |
| R333 | T599 | T596 | punct | ),tuberculosis |
| R334 | T600 | T596 | punct | -,tuberculosis |
| R336 | T602 | T603 | compound | HIV-1,replication |
| R337 | T603 | T601 | dobj | replication,stimulated |
| R338 | T604 | T603 | prep | in,replication |
| R339 | T605 | T606 | amod | co-infected,macrophages |
| R340 | T606 | T604 | pobj | macrophages,in |
| R342 | T608 | T609 | nsubj | We,show |
| R343 | T609 | T609 | ROOT | show,show |
| R344 | T610 | T618 | mark | that,induced |
| R345 | T611 | T618 | nsubjpass | NFAT5,induced |
| R346 | T612 | T618 | nsubjpass | gene,induced |
| R347 | T613 | T612 | cc | and,gene |
| R348 | T614 | T615 | compound | protein,expression |
| R349 | T615 | T612 | conj | expression,gene |
| R350 | T616 | T618 | auxpass | are,induced |
| R351 | T617 | T618 | advmod | strongly,induced |
| R352 | T618 | T609 | ccomp | induced,show |
| R353 | T619 | T618 | agent | by,induced |
| R354 | T620 | T619 | pobj | MTb,by |
| R355 | T621 | T620 | punct | ",",MTb |
| R356 | T622 | T623 | nsubj | which,is |
| R357 | T623 | T620 | relcl | is,MTb |
| R358 | T624 | T626 | det | a,receptor |
| R359 | T625 | T626 | amod | Toll-like,receptor |
| R360 | T626 | T623 | attr | receptor,is |
| R361 | T627 | T628 | punct | (,TLR |
| R362 | T628 | T623 | npadvmod | TLR,is |
| R363 | T629 | T618 | punct | ),induced |
| R364 | T630 | T618 | conj | ligand,induced |
| R365 | T631 | T630 | punct | ",",ligand |
| R366 | T632 | T618 | cc | and,induced |
| R543 | T585 | T586 | punct | (,NFAT5 |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T135 | 194-201 | Positive_regulation | denotes | induced |
| T134 | 194-201 | Positive_regulation | denotes | induced |
| T133 | 170-180 | Gene_expression | denotes | expression |
| T131 | 147-157 | Protein | denotes | NFAT5 gene |
| T124 | 1-6 | Protein | denotes | NFAT5 |
| R22 | T133 | T135 | themeOf | expression,induced |
| R20 | T131 | T133 | themeOf | NFAT5 gene,expression |
| R21 | T131 | T134 | themeOf | NFAT5 gene,induced |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T24 | 194-201 | Positive_regulation | denotes | induced |
| T15 | 147-152 | Protein | denotes | NFAT5 |
| T14 | 1-6 | Protein | denotes | NFAT5 |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T45 | 1-6 | Protein | denotes | NFAT5 |
| T35 | 147-152 | Protein | denotes | NFAT5 |
| T34 | 1-6 | Protein | denotes | NFAT5 |
| T47 | 194-201 | Positive_regulation | denotes | induced |
| T46 | 147-152 | Protein | denotes | NFAT5 |
| R12 | T46 | T47 | themeOf | NFAT5,induced |