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PMC:3320587 / 5327-5488 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22496647-12359721-98010784 75-77 12359721 denotes 32

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1679 155-160 NN denotes HIV-1
T1678 152-154 IN denotes of
T1677 141-151 NN denotes activation
T1676 129-140 JJ denotes MTb-induced
T1675 126-128 IN denotes in
T1674 117-125 VB denotes involved
T1673 114-116 VB denotes be
T1672 109-113 RB denotes also
T1671 105-108 MD denotes may
T1670 99-104 NN denotes NFAT5
T1669 94-98 IN denotes that
T1668 83-93 VB denotes speculated
T1667 80-82 PRP denotes we
T1666 78-79 -COMMA- denotes ,
T1665 77-78 -RRB- denotes ]
T1664 75-77 CD denotes 32
T1663 74-75 -LRB- denotes [
T1662 72-73 -COMMA- denotes ,
T1661 63-72 NN denotes signaling
T1660 57-62 NN denotes MyD88
T1659 54-56 IN denotes of
T1658 43-53 JJ denotes downstream
T1657 40-42 VB denotes is
T1656 34-39 WDT denotes which
T1655 32-33 -COMMA- denotes ,
T1654 29-32 NN denotes p38
T1653 22-28 NN denotes kinase
T1652 18-21 NN denotes MAP
T1651 14-17 DT denotes the
T1650 11-13 IN denotes by
T1649 1-10 VB denotes activated
R1228 T1654 T1649 arg1Of p38,activated
R1229 T1654 T1650 arg2Of p38,by
R1230 T1654 T1651 arg1Of p38,the
R1231 T1654 T1652 arg1Of p38,MAP
R1232 T1654 T1653 arg1Of p38,kinase
R1233 T1654 T1655 arg1Of p38,","
R1234 T1654 T1656 arg1Of p38,which
R1235 T1654 T1657 arg1Of p38,is
R1236 T1654 T1658 arg1Of p38,downstream
R1237 T1657 T1662 arg1Of is,","
R1238 T1657 T1663 arg1Of is,[
R1239 T1658 T1657 arg2Of downstream,is
R1240 T1658 T1659 arg1Of downstream,of
R1241 T1661 T1659 arg2Of signaling,of
R1242 T1661 T1660 arg1Of signaling,MyD88
R1243 T1664 T1663 arg2Of 32,[
R1244 T1665 T1663 arg3Of ],[
R1245 T1667 T1668 arg1Of we,speculated
R1246 T1668 T1657 arg3Of speculated,is
R1247 T1668 T1666 arg1Of speculated,","
R1248 T1670 T1671 arg1Of NFAT5,may
R1249 T1670 T1673 arg1Of NFAT5,be
R1250 T1670 T1674 arg2Of NFAT5,involved
R1251 T1674 T1668 arg2Of involved,speculated
R1252 T1674 T1669 arg1Of involved,that
R1253 T1674 T1671 arg2Of involved,may
R1254 T1674 T1672 arg1Of involved,also
R1255 T1674 T1673 arg2Of involved,be
R1256 T1674 T1675 arg1Of involved,in
R1258 T1677 T1675 arg2Of activation,in
R1259 T1677 T1676 arg1Of activation,MTb-induced
R1260 T1677 T1678 arg1Of activation,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T992 99-104 Protein denotes NFAT5
T991 57-62 Protein denotes MyD88

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1794 18-32 http://www.uniprot.org/uniprot/Q15759 denotes MAP kinase p38
T1793 18-32 http://www.uniprot.org/uniprot/P53778 denotes MAP kinase p38
T1792 18-32 http://www.uniprot.org/uniprot/O15264 denotes MAP kinase p38
T1791 18-32 http://www.uniprot.org/uniprot/Q16539 denotes MAP kinase p38
T1786 99-104 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T1776 57-62 http://www.uniprot.org/uniprot/Q99836 denotes MyD88

GO-BP

Id Subject Object Predicate Lexical cue
T1004 63-72 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T1026 29-32 http://purl.obolibrary.org/obo/GO_0004707 denotes p38
T1025 1-28 http://purl.obolibrary.org/obo/GO_0000187 denotes activated by the MAP kinase

GO-MF

Id Subject Object Predicate Lexical cue
T1046 29-32 http://purl.obolibrary.org/obo/GO_0004707 denotes p38

simple1

Id Subject Object Predicate Lexical cue
T1086 99-104 Protein denotes NFAT5
T1085 57-62 Protein denotes MyD88

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2690 1-10 Positive_regulation denotes activated
T2680 99-104 Protein denotes NFAT5
T2679 57-62 Protein denotes MyD88

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1870 1-10 Positive_regulation denotes activated
T1869 117-125 Positive_regulation denotes involved
T1859 99-104 Protein denotes NFAT5
T1858 57-62 Protein denotes MyD88
R1386 T1859 T1869 themeOf NFAT5,involved

DLUT931

Id Subject Object Predicate Lexical cue
T1819 117-125 Positive_regulation denotes involved
T1818 1-10 Positive_regulation denotes activated
T1808 99-104 Protein denotes NFAT5
T1807 57-62 Protein denotes MyD88
R1363 T1808 T1819 themeOf NFAT5,involved

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2775 57-79 Positive_regulation denotes MyD88 signaling, [32],
T2766 129-140 Protein denotes MTb-induced
T2755 99-104 Protein denotes NFAT5
T2726 57-62 Protein denotes MyD88
T2724 11-33 Protein denotes by the MAP kinase p38,
T2706 18-21 Protein denotes MAP
T2700 11-33 Protein denotes by the MAP kinase p38,
T2694 11-33 Protein denotes by the MAP kinase p38,
R2146 T2726 T2775 causeOf MyD88,"MyD88 signaling, [32],"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2570 155-160 JJ denotes HIV-1
T2569 152-154 IN denotes of
T2568 141-151 NN denotes activation
T2509 83-93 VBD denotes speculated
T2508 80-82 PRP denotes we
T2507 78-79 , denotes ,
T2506 77-78 NNP denotes ]
T2505 75-77 CD denotes 32
T2504 74-75 NNP denotes [
T2503 72-73 , denotes ,
T2502 63-72 VBG denotes signaling
T2501 57-62 NNP denotes MyD88
T2500 54-56 IN denotes of
T2499 43-53 JJ denotes downstream
T2498 40-42 VBZ denotes is
T2497 34-39 WDT denotes which
T2496 32-33 , denotes ,
T2495 29-32 CD denotes p38
T2494 22-28 NN denotes kinase
T2493 18-21 NNP denotes MAP
T2492 14-17 DT denotes the
T2491 11-13 IN denotes by
T2490 1-10 VBN denotes activated
T2567 129-140 JJ denotes MTb-induced
T2566 126-128 IN denotes in
T2565 117-125 VBN denotes involved
T2564 114-116 VB denotes be
T2563 109-113 RB denotes also
T2562 105-108 MD denotes may
T2561 99-104 NNP denotes NFAT5
T2560 94-98 IN denotes that
R1978 T2491 T2490 agent by,activated
R1980 T2492 T2494 det the,kinase
R1981 T2493 T2494 compound MAP,kinase
R1985 T2494 T2491 pobj kinase,by
R1986 T2495 T2494 appos p38,kinase
R1987 T2496 T2494 punct ",",kinase
R1989 T2497 T2498 nsubj which,is
R1992 T2498 T2494 relcl is,kinase
R1995 T2499 T2498 acomp downstream,is
R1996 T2500 T2499 prep of,downstream
R1998 T2501 T2500 pobj MyD88,of
R2000 T2502 T2498 advcl signaling,is
R2002 T2503 T2502 punct ",",signaling
R2003 T2504 T2506 nmod [,]
R2007 T2505 T2506 nummod 32,]
R2009 T2506 T2502 appos ],signaling
R2010 T2507 T2509 punct ",",speculated
R2011 T2508 T2509 nsubj we,speculated
R2012 T2509 T2509 ROOT speculated,speculated
R2013 T2560 T2565 mark that,involved
R2014 T2561 T2565 nsubjpass NFAT5,involved
R2015 T2562 T2565 aux may,involved
R2018 T2563 T2564 advmod also,be
R2020 T2564 T2565 auxpass be,involved
R2021 T2565 T2509 ccomp involved,speculated
R2022 T2566 T2565 prep in,involved
R2023 T2567 T2568 amod MTb-induced,activation
R2024 T2568 T2566 pobj activation,in
R2026 T2569 T2568 prep of,activation

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1917 99-104 Protein denotes NFAT5
T1916 57-62 Protein denotes MyD88
T1915 18-32 Protein denotes MAP kinase p38

testone

Id Subject Object Predicate Lexical cue
T867 99-104 Protein denotes NFAT5
T866 57-62 Protein denotes MyD88

test3

Id Subject Object Predicate Lexical cue
T917 99-104 Protein denotes NFAT5
T916 57-62 Protein denotes MyD88
T915 1-10 Positive_regulation denotes activated
T893 99-104 Protein denotes NFAT5
T892 57-62 Protein denotes MyD88