PMC:3320587 / 51175-51431 JSONTXT

{"project":"pmc-enju-pas","denotations":[{"id":"T18530","span":{"begin":242,"end":255},"obj":"NN"},{"id":"T18529","span":{"begin":236,"end":241},"obj":"NN"},{"id":"T18528","span":{"begin":226,"end":235},"obj":"JJ"},{"id":"T18527","span":{"begin":223,"end":225},"obj":"IN"},{"id":"T18526","span":{"begin":216,"end":222},"obj":"NN"},{"id":"T18525","span":{"begin":211,"end":215},"obj":"JJ"},{"id":"T18524","span":{"begin":203,"end":210},"obj":"VB"},{"id":"T18523","span":{"begin":201,"end":202},"obj":"-COMMA-"},{"id":"T18522","span":{"begin":193,"end":201},"obj":"VB"},{"id":"T18521","span":{"begin":188,"end":192},"obj":"RB"},{"id":"T18520","span":{"begin":181,"end":187},"obj":"NN"},{"id":"T18519","span":{"begin":177,"end":180},"obj":"NN"},{"id":"T18518","span":{"begin":172,"end":176},"obj":"IN"},{"id":"T18517","span":{"begin":170,"end":171},"obj":"-COMMA-"},{"id":"T18516","span":{"begin":167,"end":170},"obj":"CC"},{"id":"T18515","span":{"begin":161,"end":166},"obj":"NN"},{"id":"T18514","span":{"begin":158,"end":160},"obj":"IN"},{"id":"T18513","span":{"begin":152,"end":157},"obj":"VB"},{"id":"T18512","span":{"begin":141,"end":151},"obj":"NN"},{"id":"T18511","span":{"begin":125,"end":140},"obj":"JJ"},{"id":"T18510","span":{"begin":119,"end":124},"obj":"JJ"},{"id":"T18509","span":{"begin":108,"end":118},"obj":"VB"},{"id":"T18508","span":{"begin":106,"end":107},"obj":"-COMMA-"},{"id":"T18507","span":{"begin":97,"end":106},"obj":"NN"},{"id":"T18506","span":{"begin":93,"end":96},"obj":"NN"},{"id":"T18505","span":{"begin":87,"end":92},"obj":"IN"},{"id":"T18504","span":{"begin":85,"end":86},"obj":"-COMMA-"},{"id":"T18503","span":{"begin":82,"end":85},"obj":"MD"},{"id":"T18502","span":{"begin":80,"end":81},"obj":"-COMMA-"},{"id":"T18501","span":{"begin":79,"end":80},"obj":"-RRB-"},{"id":"T18500","span":{"begin":77,"end":79},"obj":"CD"},{"id":"T18499","span":{"begin":76,"end":77},"obj":"-LRB-"},{"id":"T18498","span":{"begin":70,"end":75},"obj":"NN"},{"id":"T18497","span":{"begin":57,"end":69},"obj":"JJ"},{"id":"T18496","span":{"begin":54,"end":56},"obj":"IN"},{"id":"T18495","span":{"begin":40,"end":53},"obj":"NN"},{"id":"T18494","span":{"begin":34,"end":39},"obj":"NN"},{"id":"T18493","span":{"begin":30,"end":33},"obj":"IN"},{"id":"T18492","span":{"begin":22,"end":29},"obj":"JJ"},{"id":"T18491","span":{"begin":19,"end":21},"obj":"VB"},{"id":"T18490","span":{"begin":13,"end":18},"obj":"WDT"},{"id":"T18489","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T18488","span":{"begin":6,"end":11},"obj":"NN"},{"id":"T18487","span":{"begin":4,"end":5},"obj":"-COMMA-"},{"id":"T18486","span":{"begin":0,"end":4},"obj":"RB"}],"relations":[{"id":"R13497","pred":"arg1Of","subj":"T18488","obj":"T18489"},{"id":"R13498","pred":"arg1Of","subj":"T18488","obj":"T18490"},{"id":"R13499","pred":"arg1Of","subj":"T18488","obj":"T18491"},{"id":"R13500","pred":"arg1Of","subj":"T18488","obj":"T18492"},{"id":"R13501","pred":"arg1Of","subj":"T18488","obj":"T18503"},{"id":"R13502","pred":"arg1Of","subj":"T18488","obj":"T18509"},{"id":"R13503","pred":"arg1Of","subj":"T18488","obj":"T18524"},{"id":"R13504","pred":"arg1Of","subj":"T18491","obj":"T18502"},{"id":"R13505","pred":"arg2Of","subj":"T18492","obj":"T18491"},{"id":"R13506","pred":"arg1Of","subj":"T18492","obj":"T18493"},{"id":"R13507","pred":"arg2Of","subj":"T18495","obj":"T18493"},{"id":"R13508","pred":"arg1Of","subj":"T18495","obj":"T18494"},{"id":"R13509","pred":"arg1Of","subj":"T18495","obj":"T18496"},{"id":"R13510","pred":"arg2Of","subj":"T18498","obj":"T18496"},{"id":"R13511","pred":"arg1Of","subj":"T18498","obj":"T18497"},{"id":"R13512","pred":"arg1Of","subj":"T18498","obj":"T18499"},{"id":"R13513","pred":"arg2Of","subj":"T18500","obj":"T18499"},{"id":"R13514","pred":"arg3Of","subj":"T18501","obj":"T18499"},{"id":"R13515","pred":"arg1Of","subj":"T18502","obj":"T18504"},{"id":"R13516","pred":"arg1Of","subj":"T18502","obj":"T18505"},{"id":"R13517","pred":"arg2Of","subj":"T18507","obj":"T18505"},{"id":"R13518","pred":"arg1Of","subj":"T18507","obj":"T18506"},{"id":"R13519","pred":"arg1Of","subj":"T18509","obj":"T18523"},{"id":"R13520","pred":"arg2Of","subj":"T18512","obj":"T18509"},{"id":"R13521","pred":"arg1Of","subj":"T18512","obj":"T18510"},{"id":"R13522","pred":"arg1Of","subj":"T18512","obj":"T18511"},{"id":"R13523","pred":"arg2Of","subj":"T18512","obj":"T18513"},{"id":"R13524","pred":"arg1Of","subj":"T18513","obj":"T18516"},{"id":"R13525","pred":"arg1Of","subj":"T18513","obj":"T18517"},{"id":"R13526","pred":"arg1Of","subj":"T18513","obj":"T18518"},{"id":"R13527","pred":"arg1Of","subj":"T18515","obj":"T18513"},{"id":"R13528","pred":"arg2Of","subj":"T18515","obj":"T18514"},{"id":"R13529","pred":"arg2Of","subj":"T18520","obj":"T18518"},{"id":"R13530","pred":"arg1Of","subj":"T18520","obj":"T18519"},{"id":"R13531","pred":"arg2Of","subj":"T18520","obj":"T18522"},{"id":"R13532","pred":"arg1Of","subj":"T18522","obj":"T18521"},{"id":"R13533","pred":"arg1Of","subj":"T18523","obj":"T18486"},{"id":"R13534","pred":"arg1Of","subj":"T18523","obj":"T18487"},{"id":"R13535","pred":"arg1Of","subj":"T18523","obj":"T18508"},{"id":"R13536","pred":"arg2Of","subj":"T18524","obj":"T18523"},{"id":"R13537","pred":"arg2Of","subj":"T18526","obj":"T18524"},{"id":"R13538","pred":"arg1Of","subj":"T18526","obj":"T18525"},{"id":"R13539","pred":"arg1Of","subj":"T18526","obj":"T18527"},{"id":"R13540","pred":"arg2Of","subj":"T18530","obj":"T18527"},{"id":"R13541","pred":"arg1Of","subj":"T18530","obj":"T18528"},{"id":"R13542","pred":"arg1Of","subj":"T18530","obj":"T18529"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T17359","span":{"begin":177,"end":180},"obj":"Protein"},{"id":"T17358","span":{"begin":6,"end":11},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T18860","span":{"begin":177,"end":180},"obj":"http://www.uniprot.org/uniprot/Q8UMQ1"},{"id":"T18859","span":{"begin":177,"end":180},"obj":"http://www.uniprot.org/uniprot/P04605"},{"id":"T18858","span":{"begin":177,"end":180},"obj":"http://www.uniprot.org/uniprot/P04608"},{"id":"T18857","span":{"begin":177,"end":180},"obj":"http://www.uniprot.org/uniprot/P04610"},{"id":"T18839","span":{"begin":6,"end":11},"obj":"http://www.uniprot.org/uniprot/O94916"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"GO-BP","denotations":[{"id":"T17419","span":{"begin":119,"end":140},"obj":"http://purl.obolibrary.org/obo/GO_0019083"},{"id":"T17383","span":{"begin":242,"end":255},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T17382","span":{"begin":40,"end":53},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"GO-CC","denotations":[{"id":"T17458","span":{"begin":70,"end":75},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"sentences","denotations":[{"id":"T17231","span":{"begin":0,"end":256},"obj":"Sentence"},{"id":"T299","span":{"begin":0,"end":256},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"simple1","denotations":[{"id":"T17497","span":{"begin":177,"end":180},"obj":"Protein"},{"id":"T17496","span":{"begin":6,"end":11},"obj":"Protein"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"BioNLP16_DUT","denotations":[{"id":"T20742","span":{"begin":193,"end":201},"obj":"Positive_regulation"},{"id":"T20706","span":{"begin":177,"end":180},"obj":"Protein"},{"id":"T20705","span":{"begin":6,"end":11},"obj":"Protein"}],"relations":[{"id":"R15394","pred":"themeOf","subj":"T20705","obj":"T20742"},{"id":"R15395","pred":"themeOf","subj":"T20706","obj":"T20742"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T19038","span":{"begin":177,"end":180},"obj":"Protein"},{"id":"T19037","span":{"begin":6,"end":11},"obj":"Protein"},{"id":"T19074","span":{"begin":193,"end":201},"obj":"Positive_regulation"}],"relations":[{"id":"R13915","pred":"themeOf","subj":"T19038","obj":"T19074"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"DLUT931","denotations":[{"id":"T18997","span":{"begin":193,"end":201},"obj":"Positive_regulation"},{"id":"T18958","span":{"begin":177,"end":180},"obj":"Protein"},{"id":"T18957","span":{"begin":6,"end":11},"obj":"Protein"}],"relations":[{"id":"R13878","pred":"themeOf","subj":"T18958","obj":"T18997"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T20940","span":{"begin":93,"end":107},"obj":"Regulation"},{"id":"T20900","span":{"begin":161,"end":166},"obj":"Protein"},{"id":"T20899","span":{"begin":6,"end":86},"obj":"Protein"},{"id":"T20838","span":{"begin":93,"end":96},"obj":"Protein"},{"id":"T20827","span":{"begin":57,"end":80},"obj":"Entity"},{"id":"T20821","span":{"begin":177,"end":180},"obj":"Protein"}],"relations":[{"id":"R15427","pred":"themeOf","subj":"T20838","obj":"T20940"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T20375","span":{"begin":255,"end":256},"obj":"."},{"id":"T20374","span":{"begin":242,"end":255},"obj":"NN"},{"id":"T20373","span":{"begin":236,"end":241},"obj":"NNP"},{"id":"T20372","span":{"begin":226,"end":235},"obj":"VBN"},{"id":"T20371","span":{"begin":223,"end":225},"obj":"IN"},{"id":"T20370","span":{"begin":216,"end":222},"obj":"NNS"},{"id":"T20369","span":{"begin":211,"end":215},"obj":"JJ"},{"id":"T20368","span":{"begin":203,"end":210},"obj":"VB"},{"id":"T20367","span":{"begin":201,"end":202},"obj":","},{"id":"T20366","span":{"begin":193,"end":201},"obj":"VBD"},{"id":"T20365","span":{"begin":188,"end":192},"obj":"RB"},{"id":"T20364","span":{"begin":181,"end":187},"obj":"NNS"},{"id":"T20363","span":{"begin":177,"end":180},"obj":"NNP"},{"id":"T20362","span":{"begin":172,"end":176},"obj":"IN"},{"id":"T20361","span":{"begin":170,"end":171},"obj":","},{"id":"T20360","span":{"begin":167,"end":170},"obj":"CC"},{"id":"T20359","span":{"begin":161,"end":166},"obj":"NNP"},{"id":"T20358","span":{"begin":158,"end":160},"obj":"IN"},{"id":"T20357","span":{"begin":152,"end":157},"obj":"VBN"},{"id":"T20356","span":{"begin":141,"end":151},"obj":"NN"},{"id":"T20355","span":{"begin":125,"end":140},"obj":"JJ"},{"id":"T20354","span":{"begin":119,"end":124},"obj":"JJ"},{"id":"T20353","span":{"begin":108,"end":118},"obj":"VBP"},{"id":"T20352","span":{"begin":106,"end":107},"obj":","},{"id":"T20351","span":{"begin":97,"end":106},"obj":"NN"},{"id":"T20350","span":{"begin":93,"end":96},"obj":"NNP"},{"id":"T20349","span":{"begin":87,"end":92},"obj":"IN"},{"id":"T20348","span":{"begin":85,"end":86},"obj":","},{"id":"T20347","span":{"begin":82,"end":85},"obj":"MD"},{"id":"T20346","span":{"begin":80,"end":81},"obj":","},{"id":"T20345","span":{"begin":79,"end":80},"obj":"NNP"},{"id":"T20344","span":{"begin":77,"end":79},"obj":"CD"},{"id":"T20343","span":{"begin":76,"end":77},"obj":"NNP"},{"id":"T20342","span":{"begin":70,"end":75},"obj":"NNS"},{"id":"T20341","span":{"begin":57,"end":69},"obj":"JJ"},{"id":"T20340","span":{"begin":54,"end":56},"obj":"IN"},{"id":"T20339","span":{"begin":40,"end":53},"obj":"NN"},{"id":"T20338","span":{"begin":34,"end":39},"obj":"JJ"},{"id":"T20337","span":{"begin":30,"end":33},"obj":"IN"},{"id":"T20336","span":{"begin":22,"end":29},"obj":"JJ"},{"id":"T20335","span":{"begin":19,"end":21},"obj":"VBZ"},{"id":"T20334","span":{"begin":13,"end":18},"obj":"WDT"},{"id":"T20333","span":{"begin":11,"end":12},"obj":","},{"id":"T20332","span":{"begin":6,"end":11},"obj":"NNP"},{"id":"T20331","span":{"begin":4,"end":5},"obj":","},{"id":"T20330","span":{"begin":0,"end":4},"obj":"RB"}],"relations":[{"id":"R15022","pred":"advmod","subj":"T20330","obj":"T20353"},{"id":"R15023","pred":"punct","subj":"T20331","obj":"T20353"},{"id":"R15025","pred":"nsubj","subj":"T20332","obj":"T20353"},{"id":"R15026","pred":"punct","subj":"T20333","obj":"T20332"},{"id":"R15027","pred":"nsubj","subj":"T20334","obj":"T20335"},{"id":"R15029","pred":"relcl","subj":"T20335","obj":"T20332"},{"id":"R15030","pred":"acomp","subj":"T20336","obj":"T20335"},{"id":"R15031","pred":"prep","subj":"T20337","obj":"T20336"},{"id":"R15032","pred":"compound","subj":"T20338","obj":"T20339"},{"id":"R15034","pred":"pobj","subj":"T20339","obj":"T20337"},{"id":"R15035","pred":"prep","subj":"T20340","obj":"T20339"},{"id":"R15036","pred":"amod","subj":"T20341","obj":"T20342"},{"id":"R15037","pred":"pobj","subj":"T20342","obj":"T20340"},{"id":"R15039","pred":"nmod","subj":"T20343","obj":"T20345"},{"id":"R15040","pred":"nummod","subj":"T20344","obj":"T20345"},{"id":"R15042","pred":"conj","subj":"T20345","obj":"T20332"},{"id":"R15043","pred":"punct","subj":"T20346","obj":"T20345"},{"id":"R15044","pred":"aux","subj":"T20347","obj":"T20353"},{"id":"R15046","pred":"punct","subj":"T20348","obj":"T20353"},{"id":"R15047","pred":"prep","subj":"T20349","obj":"T20353"},{"id":"R15048","pred":"compound","subj":"T20350","obj":"T20351"},{"id":"R15049","pred":"pobj","subj":"T20351","obj":"T20349"},{"id":"R15051","pred":"punct","subj":"T20352","obj":"T20353"},{"id":"R15052","pred":"ROOT","subj":"T20353","obj":"T20353"},{"id":"R15053","pred":"amod","subj":"T20354","obj":"T20356"},{"id":"R15055","pred":"amod","subj":"T20355","obj":"T20356"},{"id":"R15056","pred":"dobj","subj":"T20356","obj":"T20353"},{"id":"R15058","pred":"acl","subj":"T20357","obj":"T20356"},{"id":"R15059","pred":"agent","subj":"T20358","obj":"T20357"},{"id":"R15060","pred":"pobj","subj":"T20359","obj":"T20358"},{"id":"R15062","pred":"cc","subj":"T20360","obj":"T20353"},{"id":"R15063","pred":"punct","subj":"T20361","obj":"T20353"},{"id":"R15064","pred":"prep","subj":"T20362","obj":"T20353"},{"id":"R15065","pred":"compound","subj":"T20363","obj":"T20364"},{"id":"R15067","pred":"nsubj","subj":"T20364","obj":"T20366"},{"id":"R15068","pred":"advmod","subj":"T20365","obj":"T20366"},{"id":"R15069","pred":"ccomp","subj":"T20366","obj":"T20353"},{"id":"R15071","pred":"punct","subj":"T20367","obj":"T20366"},{"id":"R15072","pred":"conj","subj":"T20368","obj":"T20353"},{"id":"R15074","pred":"amod","subj":"T20369","obj":"T20370"},{"id":"R15075","pred":"dobj","subj":"T20370","obj":"T20368"},{"id":"R15076","pred":"prep","subj":"T20371","obj":"T20370"},{"id":"R15078","pred":"amod","subj":"T20372","obj":"T20374"},{"id":"R15079","pred":"compound","subj":"T20373","obj":"T20374"},{"id":"R15080","pred":"pobj","subj":"T20374","obj":"T20371"},{"id":"R15081","pred":"punct","subj":"T20375","obj":"T20353"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T19186","span":{"begin":193,"end":201},"obj":"Positive_regulation"},{"id":"T19185","span":{"begin":177,"end":180},"obj":"Protein"},{"id":"T19184","span":{"begin":161,"end":166},"obj":"Protein"},{"id":"T19183","span":{"begin":93,"end":96},"obj":"Protein"},{"id":"T19182","span":{"begin":6,"end":11},"obj":"Protein"}],"relations":[{"id":"R13974","pred":"themeOf","subj":"T19185","obj":"T19186"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"testone","denotations":[{"id":"T17051","span":{"begin":177,"end":180},"obj":"Protein"},{"id":"T17050","span":{"begin":6,"end":11},"obj":"Protein"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}

{"project":"test3","denotations":[{"id":"T17183","span":{"begin":177,"end":180},"obj":"Protein"},{"id":"T17182","span":{"begin":6,"end":11},"obj":"Protein"},{"id":"T17128","span":{"begin":177,"end":180},"obj":"Protein"},{"id":"T17127","span":{"begin":6,"end":11},"obj":"Protein"}],"text":"Thus, NFAT5, which is pivotal for HIV-1 transcription in unstimulated cells [31], may, after Mtb infection, perpetuate viral transcriptional initiation begun by NF-κB and, with Tat levels also elevated, promote high levels of sustained HIV-1 transcription."}