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PMC:3320587 / 50842-51062 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T18461 209-219 NN denotes activation
T18460 203-208 JJ denotes viral
T18459 197-202 IN denotes after
T18458 190-196 NN denotes stages
T18457 180-189 JJ denotes different
T18456 177-179 IN denotes at
T18455 173-176 NN denotes LTR
T18454 169-172 DT denotes the
T18453 164-168 IN denotes with
T18452 154-163 VB denotes associate
T18451 148-153 NN denotes NFAT5
T18450 144-147 CC denotes and
T18449 138-143 NN denotes NF-κB
T18448 130-137 NN denotes factors
T18447 125-129 NN denotes host
T18446 121-124 DT denotes the
T18445 116-120 IN denotes that
T18444 113-115 VB denotes is
T18443 101-112 NN denotes possibility
T18442 97-100 CD denotes one
T18441 95-96 -COMMA- denotes ,
T18440 94-95 -RRB- denotes )
T18439 92-94 NN denotes 2A
T18438 85-91 NN denotes Figure
T18437 84-85 -LRB- denotes (
T18436 74-83 NN denotes infection
T18435 65-73 JJ denotes post-MTb
T18434 59-64 NN denotes hours
T18433 56-58 CD denotes 48
T18432 50-55 JJ denotes least
T18431 47-49 IN denotes at
T18430 43-46 IN denotes for
T18429 38-42 VB denotes rise
T18428 35-37 TO denotes to
T18427 25-34 VB denotes continues
T18426 14-24 NN denotes expression
T18425 8-13 NN denotes NFAT5
T18424 0-7 IN denotes Because
R13436 T18426 T18425 arg1Of expression,NFAT5
R13437 T18426 T18427 arg1Of expression,continues
R13438 T18426 T18429 arg1Of expression,rise
R13439 T18427 T18424 arg2Of continues,Because
R13440 T18429 T18427 arg2Of rise,continues
R13441 T18429 T18428 arg1Of rise,to
R13442 T18429 T18430 arg1Of rise,for
R13443 T18433 T18431 arg1Of 48,at
R13444 T18433 T18432 arg1Of 48,least
R13445 T18434 T18433 arg1Of hours,48
R13446 T18435 T18434 arg1Of post-MTb,hours
R13447 T18436 T18430 arg2Of infection,for
R13448 T18436 T18435 arg1Of infection,post-MTb
R13449 T18436 T18437 arg1Of infection,(
R13450 T18439 T18437 arg2Of 2A,(
R13451 T18439 T18438 arg1Of 2A,Figure
R13452 T18440 T18437 arg3Of ),(
R13453 T18443 T18442 arg1Of possibility,one
R13454 T18443 T18444 arg1Of possibility,is
R13455 T18444 T18424 arg1Of is,Because
R13456 T18444 T18441 arg1Of is,","
R13457 T18449 T18450 arg1Of NF-κB,and
R13458 T18450 T18446 arg1Of and,the
R13459 T18450 T18447 arg1Of and,host
R13460 T18450 T18448 arg1Of and,factors
R13461 T18450 T18452 arg1Of and,associate
R13462 T18451 T18450 arg2Of NFAT5,and
R13463 T18452 T18444 arg2Of associate,is
R13464 T18452 T18445 arg1Of associate,that
R13465 T18452 T18453 arg1Of associate,with
R13466 T18452 T18456 arg1Of associate,at
R13467 T18452 T18459 arg1Of associate,after
R13468 T18455 T18453 arg2Of LTR,with
R13469 T18455 T18454 arg1Of LTR,the
R13470 T18458 T18456 arg2Of stages,at
R13471 T18458 T18457 arg1Of stages,different
R13472 T18461 T18459 arg2Of activation,after
R13473 T18461 T18460 arg1Of activation,viral

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T17356 148-153 Protein denotes NFAT5
T17355 8-13 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18837 148-153 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T18836 8-13 http://www.uniprot.org/uniprot/O94916 denotes NFAT5

GO-CC

Id Subject Object Predicate Lexical cue
T17461 125-129 http://purl.obolibrary.org/obo/GO_0018995 denotes host

sentences

Id Subject Object Predicate Lexical cue
T17229 0-220 Sentence denotes Because NFAT5 expression continues to rise for at least 48 hours post-MTb infection (Figure 2A), one possibility is that the host factors NF-κB and NFAT5 associate with the LTR at different stages after viral activation.
T297 0-220 Sentence denotes Because NFAT5 expression continues to rise for at least 48 hours post-MTb infection (Figure 2A), one possibility is that the host factors NF-κB and NFAT5 associate with the LTR at different stages after viral activation.

simple1

Id Subject Object Predicate Lexical cue
T17494 148-153 Protein denotes NFAT5
T17493 8-13 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T20741 154-163 Binding denotes associate
T20740 14-24 Gene_expression denotes expression
T20703 148-153 Protein denotes NFAT5
T20702 8-13 Protein denotes NFAT5
R15391 T20702 T20740 themeOf NFAT5,expression
R15393 T20703 T20741 themeOf NFAT5,associate

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T19035 148-153 Protein denotes NFAT5
T19034 8-13 Protein denotes NFAT5
T19073 14-24 Gene_expression denotes expression
T19072 154-163 Binding denotes associate
R13913 T19034 T19073 themeOf NFAT5,expression
R13914 T19035 T19072 themeOf NFAT5,associate

DLUT931

Id Subject Object Predicate Lexical cue
T18996 154-163 Binding denotes associate
T18995 14-24 Gene_expression denotes expression
T18955 148-153 Protein denotes NFAT5
T18954 8-13 Protein denotes NFAT5
R13876 T18954 T18995 themeOf NFAT5,expression
R13877 T18955 T18996 themeOf NFAT5,associate

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T20895 8-13 Protein denotes NFAT5
T20865 121-143 Protein denotes the host factors NF-κB
T20847 148-153 Protein denotes NFAT5
T20914 121-202 Binding denotes the host factors NF-κB and NFAT5 associate with the LTR at different stages after
T20913 121-202 Binding denotes the host factors NF-κB and NFAT5 associate with the LTR at different stages after
R15434 T20847 T20913 themeOf NFAT5,the host factors NF-κB and NFAT5 associate with the LTR at different stages after
R15441 T20865 T20914 themeOf the host factors NF-κB,the host factors NF-κB and NFAT5 associate with the LTR at different stages after

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20268 14-24 NN denotes expression
T20267 8-13 CD denotes NFAT5
T20266 0-7 IN denotes Because
T20289 125-129 NN denotes host
T20288 121-124 DT denotes the
T20287 116-120 IN denotes that
T20286 113-115 VBZ denotes is
T20285 101-112 NN denotes possibility
T20284 97-100 CD denotes one
T20283 95-96 , denotes ,
T20282 94-95 -RRB- denotes )
T20281 92-94 NN denotes 2A
T20280 85-91 NN denotes Figure
T20279 84-85 -LRB- denotes (
T20278 74-83 NN denotes infection
T20277 65-73 JJ denotes post-MTb
T20276 59-64 NNS denotes hours
T20275 56-58 CD denotes 48
T20274 50-55 JJS denotes least
T20273 47-49 IN denotes at
T20272 43-46 IN denotes for
T20271 38-42 VB denotes rise
T20270 35-37 TO denotes to
T20269 25-34 VBZ denotes continues
T20304 219-220 . denotes .
T20303 209-219 NN denotes activation
T20302 203-208 JJ denotes viral
T20301 197-202 IN denotes after
T20300 190-196 NNS denotes stages
T20299 180-189 JJ denotes different
T20298 177-179 IN denotes at
T20297 173-176 NNP denotes LTR
T20296 169-172 DT denotes the
T20295 164-168 IN denotes with
T20294 154-163 NN denotes associate
T20293 148-153 NNP denotes NFAT5
T20292 144-147 CC denotes and
T20291 138-143 NNP denotes NF-κB
T20290 130-137 NNS denotes factors
R14954 T20266 T20269 mark Because,continues
R14957 T20267 T20268 amod NFAT5,expression
R14961 T20268 T20269 nsubj expression,continues
R14962 T20269 T20286 advcl continues,is
R14963 T20270 T20271 aux to,rise
R14964 T20271 T20269 xcomp rise,continues
R14965 T20290 T20287 nsubj factors,that
R14966 T20272 T20271 prep for,rise
R14967 T20291 T20290 appos NF-κB,factors
R14968 T20292 T20291 cc and,NF-κB
R14969 T20273 T20274 advmod at,least
R14970 T20293 T20291 conj NFAT5,NF-κB
R14971 T20294 T20291 conj associate,NF-κB
R14972 T20274 T20275 advmod least,48
R14973 T20295 T20294 prep with,associate
R14974 T20296 T20297 det the,LTR
R14975 T20297 T20295 pobj LTR,with
R14976 T20275 T20276 nummod 48,hours
R14977 T20298 T20290 prep at,factors
R14978 T20276 T20272 pobj hours,for
R14979 T20299 T20300 amod different,stages
R14980 T20300 T20298 pobj stages,at
R14981 T20301 T20290 prep after,factors
R14982 T20302 T20303 amod viral,activation
R14983 T20303 T20301 pobj activation,after
R14984 T20304 T20286 punct .,is
R14987 T20277 T20278 amod post-MTb,infection
R14991 T20278 T20271 dobj infection,rise
R14995 T20279 T20281 punct (,2A
R14998 T20280 T20281 nmod Figure,2A
R15003 T20281 T20278 appos 2A,infection
R15006 T20282 T20281 punct ),2A
R15010 T20283 T20286 punct ",",is
R15012 T20284 T20285 nummod one,possibility
R15013 T20285 T20286 nsubj possibility,is
R15014 T20286 T20286 ROOT is,is
R15017 T20287 T20286 nsubj that,is
R15020 T20288 T20290 det the,factors
R15024 T20289 T20290 compound host,factors

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T19178 154-163 Binding denotes associate
T19177 14-24 Gene_expression denotes expression
T19176 148-153 Protein denotes NFAT5
T19175 125-143 Protein denotes host factors NF-κB
T19174 8-13 Protein denotes NFAT5
R13971 T19174 T19177 themeOf NFAT5,expression
R13972 T19176 T19178 themeOf NFAT5,associate

testone

Id Subject Object Predicate Lexical cue
T17090 154-163 Binding denotes associate
T17089 14-24 Gene_expression denotes expression
T17048 148-153 Protein denotes NFAT5
T17047 8-13 Protein denotes NFAT5
R12474 T17047 T17089 themeOf NFAT5,expression
R12475 T17048 T17090 themeOf NFAT5,associate

test3

Id Subject Object Predicate Lexical cue
T17180 148-153 Protein denotes NFAT5
T17179 14-24 Gene_expression denotes expression
T17178 8-13 Protein denotes NFAT5
T17125 148-153 Protein denotes NFAT5
T17124 8-13 Protein denotes NFAT5
R12501 T17178 T17179 themeOf NFAT5,expression