PMC:3320587 / 47263-47819 JSONTXT

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    2_test

    {"project":"2_test","denotations":[{"id":"22496647-10426995-98010814","span":{"begin":49,"end":51},"obj":"10426995"},{"id":"22496647-10490993-98010815","span":{"begin":55,"end":57},"obj":"10490993"},{"id":"22496647-19683540-98010816","span":{"begin":256,"end":258},"obj":"19683540"},{"id":"22496647-19961595-98010817","span":{"begin":262,"end":264},"obj":"19961595"},{"id":"22496647-14657027-98010818","span":{"begin":527,"end":529},"obj":"14657027"},{"id":"22496647-19961595-98010819","span":{"begin":545,"end":547},"obj":"19961595"},{"id":"22496647-15507606-98010820","span":{"begin":551,"end":553},"obj":"15507606"}],"text":"NF-κB is activated after MTb engagement of PRRs [20], [66]. Multiple studies of HIV-1 activation have shown that initial recruitment of the NF-κB p50/p65 heterodimer to the HIV-1 proviral enhancer region is crucial for HIV gene transcription (reviewed in [67], [68]). Upon interaction with the viral LTR, NF-κB rapidly induces hyperacetylation of histones associated with nucleosome 1 (nuc-1) at the HIV-1 transcription start site, resulting in recruitment of the pTEFb complex, which is required for RNA pol II processivity ([69], reviewed in [68], [70])."}

    pmc-enju-pas

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is activated after MTb engagement of PRRs [20], [66]. Multiple studies of HIV-1 activation have shown that initial recruitment of the NF-κB p50/p65 heterodimer to the HIV-1 proviral enhancer region is crucial for HIV gene transcription (reviewed in [67], [68]). Upon interaction with the viral LTR, NF-κB rapidly induces hyperacetylation of histones associated with nucleosome 1 (nuc-1) at the HIV-1 transcription start site, resulting in recruitment of the pTEFb complex, which is required for RNA pol II processivity ([69], reviewed in [68], [70])."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T17343","span":{"begin":150,"end":153},"obj":"Protein"},{"id":"T17342","span":{"begin":146,"end":149},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"NF-κB is activated after MTb engagement of PRRs [20], [66]. Multiple studies of HIV-1 activation have shown that initial recruitment of the NF-κB p50/p65 heterodimer to the HIV-1 proviral enhancer region is crucial for HIV gene transcription (reviewed in [67], [68]). Upon interaction with the viral LTR, NF-κB rapidly induces hyperacetylation of histones associated with nucleosome 1 (nuc-1) at the HIV-1 transcription start site, resulting in recruitment of the pTEFb complex, which is required for RNA pol II processivity ([69], reviewed in [68], [70])."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T18854","span":{"begin":150,"end":153},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T18852","span":{"begin":150,"end":153},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T18850","span":{"begin":146,"end":149},"obj":"http://www.uniprot.org/uniprot/P19838"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"NF-κB is activated after MTb engagement of PRRs [20], [66]. Multiple studies of HIV-1 activation have shown that initial recruitment of the NF-κB p50/p65 heterodimer to the HIV-1 proviral enhancer region is crucial for HIV gene transcription (reviewed in [67], [68]). Upon interaction with the viral LTR, NF-κB rapidly induces hyperacetylation of histones associated with nucleosome 1 (nuc-1) at the HIV-1 transcription start site, resulting in recruitment of the pTEFb complex, which is required for RNA pol II processivity ([69], reviewed in [68], [70])."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T17420","span":{"begin":0,"end":18},"obj":"http://purl.obolibrary.org/obo/GO_0051092"},{"id":"T17378","span":{"begin":406,"end":419},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T17377","span":{"begin":228,"end":241},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"NF-κB is activated after MTb engagement of PRRs [20], [66]. Multiple studies of HIV-1 activation have shown that initial recruitment of the NF-κB p50/p65 heterodimer to the HIV-1 proviral enhancer region is crucial for HIV gene transcription (reviewed in [67], [68]). Upon interaction with the viral LTR, NF-κB rapidly induces hyperacetylation of histones associated with nucleosome 1 (nuc-1) at the HIV-1 transcription start site, resulting in recruitment of the pTEFb complex, which is required for RNA pol II processivity ([69], reviewed in [68], [70])."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T17462","span":{"begin":372,"end":382},"obj":"http://purl.obolibrary.org/obo/GO_0000786"}],"text":"NF-κB is activated after MTb engagement of PRRs [20], [66]. Multiple studies of HIV-1 activation have shown that initial recruitment of the NF-κB p50/p65 heterodimer to the HIV-1 proviral enhancer region is crucial for HIV gene transcription (reviewed in [67], [68]). Upon interaction with the viral LTR, NF-κB rapidly induces hyperacetylation of histones associated with nucleosome 1 (nuc-1) at the HIV-1 transcription start site, resulting in recruitment of the pTEFb complex, which is required for RNA pol II processivity ([69], reviewed in [68], [70])."}

    sentences

    {"project":"sentences","denotations":[{"id":"T17214","span":{"begin":268,"end":556},"obj":"Sentence"},{"id":"T17213","span":{"begin":60,"end":267},"obj":"Sentence"},{"id":"T17212","span":{"begin":0,"end":59},"obj":"Sentence"},{"id":"T279","span":{"begin":0,"end":59},"obj":"Sentence"},{"id":"T280","span":{"begin":60,"end":267},"obj":"Sentence"},{"id":"T281","span":{"begin":268,"end":556},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"NF-κB is activated after MTb engagement of PRRs [20], [66]. Multiple studies of HIV-1 activation have shown that initial recruitment of the NF-κB p50/p65 heterodimer to the HIV-1 proviral enhancer region is crucial for HIV gene transcription (reviewed in [67], [68]). Upon interaction with the viral LTR, NF-κB rapidly induces hyperacetylation of histones associated with nucleosome 1 (nuc-1) at the HIV-1 transcription start site, resulting in recruitment of the pTEFb complex, which is required for RNA pol II processivity ([69], reviewed in [68], [70])."}

    simple1

    {"project":"simple1","denotations":[{"id":"T17481","span":{"begin":150,"end":153},"obj":"Protein"},{"id":"T17480","span":{"begin":146,"end":149},"obj":"Protein"}],"text":"NF-κB is activated after MTb engagement of PRRs [20], [66]. Multiple studies of HIV-1 activation have shown that initial recruitment of the NF-κB p50/p65 heterodimer to the HIV-1 proviral enhancer region is crucial for HIV gene transcription (reviewed in [67], [68]). Upon interaction with the viral LTR, NF-κB rapidly induces hyperacetylation of histones associated with nucleosome 1 (nuc-1) at the HIV-1 transcription start site, resulting in recruitment of the pTEFb complex, which is required for RNA pol II processivity ([69], reviewed in [68], [70])."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T20729","span":{"begin":121,"end":132},"obj":"Binding"},{"id":"T20690","span":{"begin":150,"end":153},"obj":"Protein"},{"id":"T20689","span":{"begin":146,"end":149},"obj":"Protein"}],"relations":[{"id":"R15382","pred":"themeOf","subj":"T20689","obj":"T20729"},{"id":"R15383","pred":"themeOf","subj":"T20690","obj":"T20729"}],"text":"NF-κB is activated after MTb engagement of PRRs [20], [66]. Multiple studies of HIV-1 activation have shown that initial recruitment of the NF-κB p50/p65 heterodimer to the HIV-1 proviral enhancer region is crucial for HIV gene transcription (reviewed in [67], [68]). Upon interaction with the viral LTR, NF-κB rapidly induces hyperacetylation of histones associated with nucleosome 1 (nuc-1) at the HIV-1 transcription start site, resulting in recruitment of the pTEFb complex, which is required for RNA pol II processivity ([69], reviewed in [68], [70])."}

    BioNLP16_Messiy

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    DLUT931

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    bionlp-st-ge-2016-test-ihmc

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    bionlp-st-ge-2016-spacy-parsed

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    bionlp-st-ge-2016-test-tees

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    testone

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    test3

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