PMC:3320587 / 467-742
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T280 | 270-272 | IN | denotes | by |
| T279 | 262-269 | VB | denotes | induced |
| T278 | 253-261 | RB | denotes | strongly |
| T277 | 249-252 | VB | denotes | are |
| T276 | 238-248 | NN | denotes | expression |
| T275 | 230-237 | NN | denotes | protein |
| T274 | 226-229 | CC | denotes | and |
| T273 | 221-225 | NN | denotes | gene |
| T272 | 215-220 | NN | denotes | NFAT5 |
| T271 | 210-214 | IN | denotes | that |
| T270 | 205-209 | VB | denotes | show |
| T269 | 202-204 | PRP | denotes | We |
| T268 | 189-200 | NN | denotes | macrophages |
| T267 | 177-188 | JJ | denotes | co-infected |
| T266 | 174-176 | IN | denotes | in |
| T265 | 162-173 | NN | denotes | replication |
| T264 | 156-161 | NN | denotes | HIV-1 |
| T263 | 144-155 | JJ | denotes | -stimulated |
| T262 | 143-144 | -RRB- | denotes | ) |
| T261 | 140-143 | NN | denotes | MTb |
| T260 | 139-140 | -LRB- | denotes | ( |
| T259 | 126-138 | NN | denotes | tuberculosis |
| T258 | 112-125 | NN | denotes | Mycobacterium |
| T257 | 103-111 | VB | denotes | inhibits |
| T256 | 101-102 | -RRB- | denotes | ) |
| T255 | 97-101 | NN | denotes | RNAi |
| T254 | 96-97 | -LRB- | denotes | ( |
| T253 | 83-95 | NN | denotes | interference |
| T252 | 79-82 | NN | denotes | RNA |
| T251 | 76-78 | IN | denotes | by |
| T250 | 74-75 | -RRB- | denotes | ) |
| T249 | 69-74 | NN | denotes | NFAT5 |
| T248 | 68-69 | -LRB- | denotes | ( |
| T247 | 66-67 | CD | denotes | 5 |
| T246 | 60-65 | NN | denotes | cells |
| T245 | 58-59 | NN | denotes | T |
| T244 | 48-57 | VB | denotes | activated |
| T243 | 45-47 | IN | denotes | of |
| T242 | 38-44 | NN | denotes | factor |
| T241 | 30-37 | JJ | denotes | nuclear |
| T240 | 23-29 | NN | denotes | factor |
| T239 | 9-22 | NN | denotes | transcription |
| T238 | 5-8 | DT | denotes | the |
| T237 | 2-4 | IN | denotes | of |
| R66 | T242 | T237 | arg2Of | factor,of |
| R67 | T242 | T238 | arg1Of | factor,the |
| R68 | T242 | T239 | arg1Of | factor,transcription |
| R69 | T242 | T240 | arg1Of | factor,factor |
| R70 | T242 | T241 | arg1Of | factor,nuclear |
| R71 | T242 | T243 | arg1Of | factor,of |
| R72 | T242 | T251 | arg1Of | factor,by |
| R73 | T247 | T243 | arg2Of | 5,of |
| R74 | T247 | T244 | arg2Of | 5,activated |
| R75 | T247 | T245 | arg1Of | 5,T |
| R76 | T247 | T246 | arg1Of | 5,cells |
| R77 | T247 | T248 | arg1Of | 5,( |
| R78 | T249 | T248 | arg2Of | NFAT5,( |
| R79 | T250 | T248 | arg3Of | ),( |
| R80 | T253 | T251 | arg2Of | interference,by |
| R81 | T253 | T252 | arg1Of | interference,RNA |
| R82 | T253 | T254 | arg1Of | interference,( |
| R83 | T255 | T254 | arg2Of | RNAi,( |
| R84 | T256 | T254 | arg3Of | ),( |
| R87 | T261 | T260 | arg2Of | MTb,( |
| R88 | T262 | T260 | arg3Of | ),( |
| R89 | T265 | T257 | arg2Of | replication,inhibits |
| R90 | T265 | T258 | arg1Of | replication,Mycobacterium |
| R91 | T265 | T259 | arg1Of | replication,tuberculosis |
| R92 | T265 | T260 | arg1Of | replication,( |
| R93 | T265 | T263 | arg1Of | replication,-stimulated |
| R94 | T265 | T264 | arg1Of | replication,HIV-1 |
| R95 | T265 | T266 | arg1Of | replication,in |
| R96 | T268 | T266 | arg2Of | macrophages,in |
| R97 | T268 | T267 | arg1Of | macrophages,co-infected |
| R98 | T269 | T270 | arg1Of | We,show |
| R99 | T273 | T272 | arg1Of | gene,NFAT5 |
| R100 | T273 | T274 | arg1Of | gene,and |
| R101 | T274 | T277 | arg1Of | and,are |
| R102 | T274 | T279 | arg2Of | and,induced |
| R103 | T276 | T274 | arg2Of | expression,and |
| R104 | T276 | T275 | arg1Of | expression,protein |
| R105 | T279 | T271 | arg1Of | induced,that |
| R106 | T279 | T277 | arg2Of | induced,are |
| R107 | T279 | T278 | arg1Of | induced,strongly |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T86 | 30-67 | Protein | denotes | nuclear factor of activated T cells 5 |
| T87 | 69-74 | Protein | denotes | NFAT5 |
| T88 | 215-220 | Protein | denotes | NFAT5 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T412 | 69-74 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
| T413 | 215-220 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T104 | 97-101 | http://purl.obolibrary.org/obo/GO_0016246 | denotes | RNAi |
| T103 | 79-95 | http://purl.obolibrary.org/obo/GO_0016246 | denotes | RNA interference |
| T99 | 9-22 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T119 | 60-65 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T116 | 126-138 | http://purl.bioontology.org/ontology/ICD10/A15-A19.9 | denotes | tuberculosis |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T169 | 30-67 | Protein | denotes | nuclear factor of activated T cells 5 |
| T170 | 69-74 | Protein | denotes | NFAT5 |
| T171 | 215-220 | Protein | denotes | NFAT5 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T756 | 30-67 | Protein | denotes | nuclear factor of activated T cells 5 |
| T757 | 69-74 | Protein | denotes | NFAT5 |
| T758 | 215-220 | Protein | denotes | NFAT5 |
| T769 | 262-269 | Positive_regulation | denotes | induced |
| T770 | 238-248 | Gene_expression | denotes | expression |
| R583 | T758 | T769 | themeOf | NFAT5,induced |
| R584 | T758 | T770 | themeOf | NFAT5,expression |
| R592 | T770 | T769 | themeOf | expression,induced |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T442 | 30-67 | Protein | denotes | nuclear factor of activated T cells 5 |
| T443 | 69-74 | Protein | denotes | NFAT5 |
| T444 | 215-220 | Protein | denotes | NFAT5 |
| T454 | 262-269 | Positive_regulation | denotes | induced |
| T455 | 238-248 | Gene_expression | denotes | expression |
| R509 | T444 | T454 | themeOf | NFAT5,induced |
| R511 | T444 | T455 | themeOf | NFAT5,expression |
| R518 | T455 | T454 | themeOf | expression,induced |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T434 | 262-269 | Positive_regulation | denotes | induced |
| T422 | 30-67 | Protein | denotes | nuclear factor of activated T cells 5 |
| T423 | 69-74 | Protein | denotes | NFAT5 |
| T424 | 215-220 | Protein | denotes | NFAT5 |
| T433 | 238-248 | Gene_expression | denotes | expression |
| R502 | T424 | T433 | themeOf | NFAT5,expression |
| R503 | T424 | T434 | themeOf | NFAT5,induced |
| R507 | T433 | T434 | themeOf | expression,induced |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T821 | 2-111 | Negative_regulation | denotes | of the transcription factor nuclear factor of activated T cells 5 (NFAT5) by RNA interference (RNAi) inhibits |
| T816 | 230-248 | Gene_expression | denotes | protein expression |
| T809 | 215-225 | Protein | denotes | NFAT5 gene |
| T786 | 177-200 | Entity | denotes | co-infected macrophages |
| T795 | 2-111 | Protein | denotes | of the transcription factor nuclear factor of activated T cells 5 (NFAT5) by RNA interference (RNAi) inhibits |
| T797 | 30-75 | Protein | denotes | nuclear factor of activated T cells 5 (NFAT5) |
| T800 | 215-220 | Protein | denotes | NFAT5 |
| T803 | 69-74 | Protein | denotes | NFAT5 |
| T804 | 140-143 | Protein | denotes | MTb |
| T806 | 230-237 | Protein | denotes | protein |
| R604 | T795 | T821 | themeOf | of the transcription factor nuclear factor of activated T cells 5 (NFAT5) by RNA interference (RNAi) inhibits,of the transcription factor nuclear factor of activated T cells 5 (NFAT5) by RNA interference (RNAi) inhibits |
| R605 | T797 | T821 | causeOf | nuclear factor of activated T cells 5 (NFAT5),of the transcription factor nuclear factor of activated T cells 5 (NFAT5) by RNA interference (RNAi) inhibits |
| R606 | T806 | T816 | themeOf | protein,protein expression |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T619 | 270-272 | IN | denotes | by |
| T618 | 262-269 | VBN | denotes | induced |
| T617 | 253-261 | RB | denotes | strongly |
| T616 | 249-252 | VBP | denotes | are |
| T615 | 238-248 | NN | denotes | expression |
| T614 | 230-237 | NN | denotes | protein |
| T613 | 226-229 | CC | denotes | and |
| T612 | 221-225 | NN | denotes | gene |
| T611 | 215-220 | CD | denotes | NFAT5 |
| T610 | 210-214 | IN | denotes | that |
| T609 | 205-209 | VBP | denotes | show |
| T608 | 202-204 | PRP | denotes | We |
| T607 | 200-201 | . | denotes | . |
| T606 | 189-200 | NNS | denotes | macrophages |
| T605 | 177-188 | JJ | denotes | co-infected |
| T604 | 174-176 | IN | denotes | in |
| T603 | 162-173 | NN | denotes | replication |
| T602 | 156-161 | NNP | denotes | HIV-1 |
| T601 | 145-155 | VBN | denotes | stimulated |
| T600 | 144-145 | : | denotes | - |
| T599 | 143-144 | -RRB- | denotes | ) |
| T598 | 140-143 | NNP | denotes | MTb |
| T597 | 139-140 | -LRB- | denotes | ( |
| T596 | 126-138 | NN | denotes | tuberculosis |
| T595 | 112-125 | NNP | denotes | Mycobacterium |
| T594 | 103-111 | VBZ | denotes | inhibits |
| T593 | 101-102 | -RRB- | denotes | ) |
| T592 | 97-101 | NNS | denotes | RNAi |
| T591 | 96-97 | -LRB- | denotes | ( |
| T590 | 83-95 | NN | denotes | interference |
| T589 | 79-82 | NNP | denotes | RNA |
| T588 | 76-78 | IN | denotes | by |
| T574 | 2-4 | IN | denotes | of |
| T575 | 5-8 | DT | denotes | the |
| T576 | 9-22 | NN | denotes | transcription |
| T577 | 23-29 | NN | denotes | factor |
| T578 | 30-37 | JJ | denotes | nuclear |
| T579 | 38-44 | NN | denotes | factor |
| T580 | 45-47 | IN | denotes | of |
| T581 | 48-57 | VBN | denotes | activated |
| T582 | 58-59 | NNP | denotes | T |
| T583 | 60-65 | NNS | denotes | cells |
| T584 | 66-67 | CD | denotes | 5 |
| T585 | 68-69 | -LRB- | denotes | ( |
| T586 | 69-74 | CD | denotes | NFAT5 |
| T587 | 74-75 | -RRB- | denotes | ) |
| R323 | T589 | T590 | compound | RNA,interference |
| R324 | T590 | T588 | pobj | interference,by |
| R325 | T591 | T592 | punct | (,RNAi |
| R329 | T595 | T596 | compound | Mycobacterium,tuberculosis |
| R330 | T596 | T594 | dobj | tuberculosis,inhibits |
| R331 | T597 | T596 | punct | (,tuberculosis |
| R332 | T598 | T596 | appos | MTb,tuberculosis |
| R333 | T599 | T596 | punct | ),tuberculosis |
| R334 | T600 | T596 | punct | -,tuberculosis |
| R336 | T602 | T603 | compound | HIV-1,replication |
| R337 | T603 | T601 | dobj | replication,stimulated |
| R338 | T604 | T603 | prep | in,replication |
| R339 | T605 | T606 | amod | co-infected,macrophages |
| R340 | T606 | T604 | pobj | macrophages,in |
| R342 | T608 | T609 | nsubj | We,show |
| R343 | T609 | T609 | ROOT | show,show |
| R344 | T610 | T618 | mark | that,induced |
| R345 | T611 | T618 | nsubjpass | NFAT5,induced |
| R346 | T612 | T618 | nsubjpass | gene,induced |
| R347 | T613 | T612 | cc | and,gene |
| R348 | T614 | T615 | compound | protein,expression |
| R349 | T615 | T612 | conj | expression,gene |
| R350 | T616 | T618 | auxpass | are,induced |
| R351 | T617 | T618 | advmod | strongly,induced |
| R352 | T618 | T609 | ccomp | induced,show |
| R353 | T619 | T618 | agent | by,induced |
| R533 | T575 | T577 | det | the,factor |
| R534 | T576 | T577 | compound | transcription,factor |
| R535 | T577 | T574 | pobj | factor,of |
| R536 | T578 | T579 | amod | nuclear,factor |
| R539 | T581 | T583 | amod | activated,cells |
| R540 | T582 | T583 | compound | T,cells |
| R541 | T583 | T580 | pobj | cells,of |
| R543 | T585 | T586 | punct | (,NFAT5 |
| R544 | T586 | T584 | prep | NFAT5,5 |
| R545 | T587 | T584 | punct | ),5 |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T135 | 262-269 | Positive_regulation | denotes | induced |
| T134 | 262-269 | Positive_regulation | denotes | induced |
| T133 | 238-248 | Gene_expression | denotes | expression |
| T131 | 215-225 | Protein | denotes | NFAT5 gene |
| T122 | 9-44 | Protein | denotes | transcription factor nuclear factor |
| T123 | 48-67 | Protein | denotes | activated T cells 5 |
| T124 | 69-74 | Protein | denotes | NFAT5 |
| R22 | T133 | T135 | themeOf | expression,induced |
| R20 | T131 | T133 | themeOf | NFAT5 gene,expression |
| R21 | T131 | T134 | themeOf | NFAT5 gene,induced |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T24 | 262-269 | Positive_regulation | denotes | induced |
| T15 | 215-220 | Protein | denotes | NFAT5 |
| T14 | 69-74 | Protein | denotes | NFAT5 |
| T13 | 30-67 | Protein | denotes | nuclear factor of activated T cells 5 |
| R1 | T14 | T13 | equivalentTo | NFAT5,nuclear factor of activated T cells 5 |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T45 | 69-74 | Protein | denotes | NFAT5 |
| T44 | 30-67 | Protein | denotes | nuclear factor of activated T cells 5 |
| T35 | 215-220 | Protein | denotes | NFAT5 |
| T34 | 69-74 | Protein | denotes | NFAT5 |
| T33 | 30-67 | Protein | denotes | nuclear factor of activated T cells 5 |
| T47 | 262-269 | Positive_regulation | denotes | induced |
| T46 | 215-220 | Protein | denotes | NFAT5 |
| R11 | T45 | T44 | equivalentTo | NFAT5,nuclear factor of activated T cells 5 |
| R12 | T46 | T47 | themeOf | NFAT5,induced |