PMC:3320587 / 45646-45703
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15542 | 56-57 | -COMMA- | denotes | , |
| T15541 | 55-56 | -RRB- | denotes | ) |
| T15540 | 53-55 | NN | denotes | 7B |
| T15539 | 46-52 | NN | denotes | Figure |
| T15538 | 45-46 | -LRB- | denotes | ( |
| T15537 | 39-44 | NN | denotes | MyD88 |
| T15536 | 36-38 | IN | denotes | on |
| T15535 | 29-35 | VB | denotes | depend |
| T15534 | 25-28 | RB | denotes | not |
| T15533 | 21-24 | VB | denotes | did |
| T15532 | 10-20 | NN | denotes | expression |
| T15531 | 5-9 | NN | denotes | gene |
| T15530 | 0-4 | NN | denotes | CD86 |
| R11424 | T15532 | T15530 | arg1Of | expression,CD86 |
| R11425 | T15532 | T15531 | arg1Of | expression,gene |
| R11426 | T15532 | T15533 | arg1Of | expression,did |
| R11427 | T15532 | T15535 | arg1Of | expression,depend |
| R11429 | T15535 | T15533 | arg2Of | depend,did |
| R11430 | T15535 | T15534 | arg1Of | depend,not |
| R11431 | T15535 | T15536 | arg1Of | depend,on |
| R11432 | T15537 | T15536 | arg2Of | MyD88,on |
| R11433 | T15537 | T15538 | arg1Of | MyD88,( |
| R11434 | T15540 | T15538 | arg2Of | 7B,( |
| R11435 | T15540 | T15539 | arg1Of | 7B,Figure |
| R11436 | T15541 | T15538 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14946 | 39-44 | Protein | denotes | MyD88 |
| T14945 | 0-4 | Protein | denotes | CD86 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15643 | 0-4 | http://www.uniprot.org/uniprot/P42081 | denotes | CD86 |
| T15628 | 39-44 | http://www.uniprot.org/uniprot/Q99836 | denotes | MyD88 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14965 | 5-20 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | gene expression |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15026 | 39-44 | Protein | denotes | MyD88 |
| T15025 | 0-4 | Protein | denotes | CD86 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16726 | 39-44 | Protein | denotes | MyD88 |
| T16725 | 0-4 | Protein | denotes | CD86 |
| T16789 | 10-20 | Gene_expression | denotes | expression |
| T16786 | 29-35 | Positive_regulation | denotes | depend |
| R12402 | T16725 | T16789 | themeOf | CD86,expression |
| R12403 | T16726 | T16786 | themeOf | MyD88,depend |
| R12428 | T16789 | T16786 | themeOf | expression,depend |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15809 | 39-44 | Protein | denotes | MyD88 |
| T15808 | 0-4 | Protein | denotes | CD86 |
| T15864 | 10-20 | Gene_expression | denotes | expression |
| T15860 | 29-35 | Positive_regulation | denotes | depend |
| R11635 | T15808 | T15864 | themeOf | CD86,expression |
| R11636 | T15809 | T15860 | themeOf | MyD88,depend |
| R11667 | T15864 | T15860 | themeOf | expression,depend |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15694 | 39-44 | Protein | denotes | MyD88 |
| T15693 | 0-4 | Protein | denotes | CD86 |
| T15754 | 29-35 | Regulation | denotes | depend |
| T15753 | 10-20 | Gene_expression | denotes | expression |
| R11537 | T15693 | T15753 | themeOf | CD86,expression |
| R11538 | T15694 | T15754 | causeOf | MyD88,depend |
| R11587 | T15753 | T15754 | themeOf | expression,depend |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16916 | 0-20 | Gene_expression | denotes | CD86 gene expression |
| T16907 | 0-57 | Regulation | denotes | CD86 gene expression did not depend on MyD88 (Figure 7B), |
| T16829 | 0-4 | Protein | denotes | CD86 |
| T16818 | 36-57 | Protein | denotes | on MyD88 (Figure 7B), |
| R12434 | T16818 | T16907 | causeOf | "on MyD88 (Figure 7B),","CD86 gene expression did not depend on MyD88 (Figure 7B)," |
| R12439 | T16829 | T16916 | themeOf | CD86,CD86 gene expression |
| R12461 | T16916 | T16907 | themeOf | CD86 gene expression,"CD86 gene expression did not depend on MyD88 (Figure 7B)," |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16618 | 56-57 | , | denotes | , |
| T16617 | 55-56 | -RRB- | denotes | ) |
| T16616 | 53-55 | NN | denotes | 7B |
| T16615 | 46-52 | NNP | denotes | Figure |
| T16614 | 45-46 | -LRB- | denotes | ( |
| T16613 | 39-44 | NNP | denotes | MyD88 |
| T16612 | 36-38 | IN | denotes | on |
| T16611 | 29-35 | VB | denotes | depend |
| T16610 | 25-28 | RB | denotes | not |
| T16609 | 21-24 | VBD | denotes | did |
| T16608 | 10-20 | NN | denotes | expression |
| T16607 | 5-9 | NN | denotes | gene |
| T16606 | 0-4 | NNP | denotes | CD86 |
| R12285 | T16606 | T16608 | compound | CD86,expression |
| R12286 | T16607 | T16608 | compound | gene,expression |
| R12287 | T16608 | T16611 | nsubj | expression,depend |
| R12288 | T16609 | T16611 | aux | did,depend |
| R12289 | T16610 | T16611 | neg | not,depend |
| R12291 | T16612 | T16611 | prep | on,depend |
| R12292 | T16613 | T16612 | pobj | MyD88,on |
| R12293 | T16614 | T16616 | punct | (,7B |
| R12294 | T16615 | T16616 | compound | Figure,7B |
| R12295 | T16616 | T16613 | appos | 7B,MyD88 |
| R12296 | T16617 | T16616 | punct | ),7B |
| R12297 | T16618 | T16613 | punct | ",",MyD88 |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16029 | 29-35 | Positive_regulation | denotes | depend |
| T16028 | 10-20 | Gene_expression | denotes | expression |
| T16020 | 39-44 | Protein | denotes | MyD88 |
| T16019 | 0-9 | Protein | denotes | CD86 gene |
| R11743 | T16019 | T16028 | themeOf | CD86 gene,expression |
| R11744 | T16020 | T16029 | causeOf | MyD88,depend |
| R11752 | T16028 | T16029 | themeOf | expression,depend |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14620 | 10-20 | Gene_expression | denotes | expression |
| T14583 | 39-44 | Protein | denotes | MyD88 |
| T14582 | 0-4 | Protein | denotes | CD86 |
| R10830 | T14582 | T14620 | themeOf | CD86,expression |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14672 | 39-44 | Protein | denotes | MyD88 |
| T14671 | 0-4 | Protein | denotes | CD86 |
| T14743 | 39-44 | Protein | denotes | MyD88 |
| T14742 | 10-20 | Gene_expression | denotes | expression |
| T14741 | 0-4 | Protein | denotes | CD86 |
| R10868 | T14741 | T14742 | themeOf | CD86,expression |