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PMC:3320587 / 44-448 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T232 392-396 IN denotes that
T231 380-391 VB denotes demonstrate
T230 377-379 PRP denotes we
T229 375-376 -COMMA- denotes ,
T228 371-375 RB denotes Here
T227 365-369 NN denotes load
T226 359-364 JJ denotes viral
T225 356-358 IN denotes in
T224 347-355 NN denotes increase
T223 344-346 DT denotes an
T222 341-343 TO denotes to
T221 333-340 VB denotes leading
T220 331-332 -COMMA- denotes ,
T219 320-331 NN denotes replication
T218 314-319 NN denotes HIV-1
T217 304-313 VB denotes stimulate
T216 299-303 WDT denotes that
T215 290-298 NN denotes cascades
T214 280-289 NN denotes signaling
T213 273-279 JJ denotes immune
T212 264-272 JJ denotes adaptive
T211 260-263 CC denotes and
T210 253-259 JJ denotes innate
T209 242-252 VB denotes activating
T182 7-12 NN denotes HIV-1
T183 13-26 NN denotes Transcription
T184 27-34 VB denotes Reveals
T185 35-36 DT denotes a
T186 37-40 NNP denotes New
T187 41-45 NNP denotes Role
T188 46-49 IN denotes for
T189 50-55 NN denotes NFAT5
T190 56-58 IN denotes in
T191 59-62 DT denotes the
T192 63-72 JJ denotes Toll-Like
T193 73-81 NN denotes Receptor
T194 82-89 NN denotes Pathway
T195 150-162 NN denotes Tuberculosis
T196 163-164 -LRB- denotes (
T197 164-166 NN denotes TB
T198 166-167 -RRB- denotes )
T199 168-175 NN denotes disease
T200 176-178 IN denotes in
T201 179-182 NN denotes HIV
T202 183-194 JJ denotes co-infected
T203 195-203 NN denotes patients
T204 204-215 VB denotes contributes
T205 216-218 TO denotes to
T206 219-228 VB denotes increased
T207 229-238 NN denotes mortality
T208 239-241 IN denotes by
R45 T215 T214 arg1Of cascades,signaling
R46 T215 T216 arg1Of cascades,that
R47 T215 T217 arg1Of cascades,stimulate
R48 T217 T220 arg1Of stimulate,","
R49 T217 T221 modOf stimulate,leading
R50 T219 T217 arg2Of replication,stimulate
R51 T219 T218 arg1Of replication,HIV-1
R52 T221 T222 arg1Of leading,to
R53 T224 T222 arg2Of increase,to
R54 T224 T223 arg1Of increase,an
R55 T224 T225 arg1Of increase,in
R56 T227 T225 arg2Of load,in
R57 T227 T226 arg1Of load,viral
R58 T230 T231 arg1Of we,demonstrate
R59 T231 T228 arg1Of demonstrate,Here
R60 T231 T229 arg1Of demonstrate,","
R38 T209 T208 arg2Of activating,by
R39 T210 T211 arg1Of innate,and
R40 T212 T211 arg2Of adaptive,and
R41 T215 T209 arg2Of cascades,activating
R42 T215 T210 arg1Of cascades,innate
R43 T215 T212 arg1Of cascades,adaptive
R44 T215 T213 arg1Of cascades,immune
R474 T183 T182 arg1Of Transcription,HIV-1
R475 T183 T184 arg1Of Transcription,Reveals
R476 T184 T190 arg1Of Reveals,in
R477 T187 T184 arg2Of Role,Reveals
R478 T187 T185 arg1Of Role,a
R479 T187 T186 arg1Of Role,New
R480 T187 T188 arg1Of Role,for
R481 T189 T188 arg2Of NFAT5,for
R482 T194 T190 arg2Of Pathway,in
R483 T194 T191 arg1Of Pathway,the
R484 T194 T192 arg1Of Pathway,Toll-Like
R485 T194 T193 arg1Of Pathway,Receptor
R486 T195 T196 arg1Of Tuberculosis,(
R487 T197 T196 arg2Of TB,(
R488 T198 T196 arg3Of ),(
R489 T199 T195 arg1Of disease,Tuberculosis
R490 T199 T200 arg1Of disease,in
R491 T199 T204 arg1Of disease,contributes
R492 T199 T209 arg1Of disease,activating
R493 T203 T200 arg2Of patients,in
R494 T203 T201 arg1Of patients,HIV
R495 T203 T202 arg1Of patients,co-infected
R496 T204 T205 arg1Of contributes,to
R497 T204 T208 arg1Of contributes,by
R498 T207 T205 arg2Of mortality,to
R499 T207 T206 arg2Of mortality,increased

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T85 50-55 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T411 50-55 http://www.uniprot.org/uniprot/O94916 denotes NFAT5

GO-BP

Id Subject Object Predicate Lexical cue
T98 13-26 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T102 280-298 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling cascades
T100 280-289 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

sentences

Id Subject Object Predicate Lexical cue
T58 150-370 Sentence denotes Tuberculosis (TB) disease in HIV co-infected patients contributes to increased mortality by activating innate and adaptive immune signaling cascades that stimulate HIV-1 replication, leading to an increase in viral load.
T2 90-139 Sentence denotes NFAT5 Modulation of MTb-Induced HIV-1 Replication
T3 141-149 Sentence denotes Abstract
T4 150-370 Sentence denotes Tuberculosis (TB) disease in HIV co-infected patients contributes to increased mortality by activating innate and adaptive immune signaling cascades that stimulate HIV-1 replication, leading to an increase in viral load.

simple1

Id Subject Object Predicate Lexical cue
T168 50-55 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T755 50-55 Protein denotes NFAT5
T766 41-45 Regulation denotes Role
R581 T755 T766 themeOf NFAT5,Role

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T441 50-55 Protein denotes NFAT5

DLUT931

Id Subject Object Predicate Lexical cue
T421 50-55 Protein denotes NFAT5

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T805 50-55 Protein denotes NFAT5
T798 59-81 Protein denotes the Toll-Like Receptor

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T518 7-12 NNP denotes HIV-1
T519 13-26 NNP denotes Transcription
T520 27-34 VBZ denotes Reveals
T521 35-36 DT denotes a
T522 37-40 NNP denotes New
T523 41-45 NNP denotes Role
T524 46-49 IN denotes for
T525 50-55 NNP denotes NFAT5
T526 56-58 IN denotes in
T527 59-62 DT denotes the
T528 63-72 NNP denotes Toll-Like
T529 73-81 NNP denotes Receptor
T530 82-89 NNP denotes Pathway
T568 380-391 VBP denotes demonstrate
T567 377-379 PRP denotes we
T566 375-376 , denotes ,
T565 371-375 RB denotes Here
T564 369-370 . denotes .
T563 365-369 NN denotes load
T562 359-364 JJ denotes viral
T561 356-358 IN denotes in
T560 347-355 NN denotes increase
T559 344-346 DT denotes an
T558 341-343 TO denotes to
T557 333-340 VBG denotes leading
T556 331-332 , denotes ,
T555 320-331 NN denotes replication
T554 314-319 JJ denotes HIV-1
T553 304-313 VBP denotes stimulate
T552 299-303 WDT denotes that
T551 290-298 NNS denotes cascades
T550 280-289 VBG denotes signaling
T549 273-279 JJ denotes immune
T548 264-272 JJ denotes adaptive
T547 260-263 CC denotes and
T546 253-259 NN denotes innate
T545 242-252 VBG denotes activating
T544 239-241 IN denotes by
T543 229-238 NN denotes mortality
T542 219-228 VBN denotes increased
T541 216-218 TO denotes to
T540 204-215 VBZ denotes contributes
T539 195-203 NNS denotes patients
T538 183-194 VBD denotes co-infected
T537 179-182 NNP denotes HIV
T536 176-178 IN denotes in
T535 168-175 NN denotes disease
T534 166-167 -RRB- denotes )
T533 164-166 NN denotes TB
T532 163-164 -LRB- denotes (
T531 150-162 NNP denotes Tuberculosis
T569 392-396 IN denotes that
R271 T518 T519 compound HIV-1,Transcription
R272 T519 T520 nsubj Transcription,Reveals
R273 T520 T520 ROOT Reveals,Reveals
R274 T521 T523 det a,Role
R275 T522 T523 compound New,Role
R276 T523 T520 dobj Role,Reveals
R277 T524 T523 prep for,Role
R278 T525 T524 pobj NFAT5,for
R279 T526 T523 prep in,Role
R280 T527 T531 det the,Tuberculosis
R281 T528 T531 compound Toll-Like,Tuberculosis
R282 T529 T531 compound Receptor,Tuberculosis
R283 T530 T531 compound Pathway,Tuberculosis
R284 T531 T526 pobj Tuberculosis,in
R285 T532 T531 punct (,Tuberculosis
R286 T533 T531 appos TB,Tuberculosis
R287 T534 T531 punct ),Tuberculosis
R288 T535 T523 conj disease,Role
R289 T536 T535 prep in,disease
R290 T537 T536 pobj HIV,in
R291 T538 T539 amod co-infected,patients
R292 T539 T523 conj patients,Role
R293 T540 T520 conj contributes,Reveals
R294 T541 T540 prep to,contributes
R295 T542 T543 amod increased,mortality
R296 T543 T541 pobj mortality,to
R297 T544 T540 prep by,contributes
R298 T545 T544 pcomp activating,by
R299 T546 T545 dobj innate,activating
R300 T547 T546 cc and,innate
R301 T548 T550 amod adaptive,signaling
R302 T549 T550 amod immune,signaling
R303 T550 T545 conj signaling,activating
R304 T551 T550 dobj cascades,signaling
R305 T552 T553 nsubj that,stimulate
R306 T553 T551 relcl stimulate,cascades
R307 T554 T555 compound HIV-1,replication
R308 T555 T553 dobj replication,stimulate
R309 T556 T550 punct ",",signaling
R310 T557 T550 conj leading,signaling
R311 T558 T557 prep to,leading
R312 T559 T560 det an,increase
R313 T560 T558 pobj increase,to
R314 T561 T560 prep in,increase
R315 T562 T563 amod viral,load
R316 T563 T561 pobj load,in
R317 T564 T520 punct .,Reveals
R318 T565 T568 advmod Here,demonstrate
R319 T566 T568 punct ",",demonstrate
R320 T567 T568 nsubj we,demonstrate
R321 T568 T568 ROOT demonstrate,demonstrate

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T120 50-55 Protein denotes NFAT5
T121 63-81 Protein denotes Toll-Like Receptor

testone

Id Subject Object Predicate Lexical cue
T12 50-55 Protein denotes NFAT5

test3

Id Subject Object Predicate Lexical cue
T32 50-55 Protein denotes NFAT5
T43 50-55 Protein denotes NFAT5