> top > docs > PMC:3320587 > spans > 43850-43992 > annotations

PMC:3320587 / 43850-43992 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T27509 140-141 -RRB- denotes )
T27508 136-140 CD denotes 0.01
T27507 135-136 SYM denotes <
T27506 134-135 NN denotes p
T27505 132-133 -COMMA- denotes ,
T27504 130-132 SYM denotes **
T27503 128-129 -COLON- denotes ;
T27502 124-128 CD denotes 0.05
T27501 123-124 SYM denotes <
T27500 122-123 NN denotes p
T27499 120-121 -COMMA- denotes ,
T27498 119-120 SYM denotes *
T27497 118-119 -LRB- denotes (
T27496 108-117 NN denotes controls.
T27495 105-107 IN denotes as
T27494 96-104 VB denotes measured
T27493 91-95 VB denotes were
T27492 89-90 -COMMA- denotes ,
T27491 79-89 NN denotes activation
T27490 75-78 NN denotes PRR
T27489 72-74 IN denotes by
T27488 64-71 VB denotes induced
T27487 61-63 VB denotes be
T27486 58-60 TO denotes to
T27485 52-57 NN denotes TRAF6
T27484 48-51 CC denotes and
T27483 42-47 NN denotes IRAK1
T27482 34-41 VB denotes require
T27481 28-33 WDT denotes which
T27480 25-27 IN denotes of
T27479 20-24 DT denotes both
T27478 18-19 -COMMA- denotes ,
T27477 13-18 NN denotes mRNAs
T27476 8-12 NN denotes CD86
T27475 4-7 CC denotes and
T27474 0-3 NN denotes TNF
R19997 T27474 T27475 arg1Of TNF,and
R19998 T27476 T27475 arg2Of CD86,and
R19999 T27477 T27474 arg1Of mRNAs,TNF
R20000 T27477 T27476 arg1Of mRNAs,CD86
R20001 T27477 T27478 arg1Of mRNAs,","
R20002 T27477 T27480 arg2Of mRNAs,of
R20003 T27477 T27481 arg1Of mRNAs,which
R20004 T27477 T27493 arg1Of mRNAs,were
R20005 T27477 T27494 arg2Of mRNAs,measured
R20006 T27479 T27480 arg1Of both,of
R20007 T27479 T27482 arg1Of both,require
R20008 T27483 T27484 arg1Of IRAK1,and
R20009 T27484 T27482 arg2Of and,require
R20010 T27484 T27486 modOf and,to
R20011 T27484 T27487 arg1Of and,be
R20012 T27484 T27488 arg2Of and,induced
R20013 T27485 T27484 arg2Of TRAF6,and
R20014 T27488 T27486 arg1Of induced,to
R20015 T27488 T27487 arg2Of induced,be
R20016 T27491 T27488 arg1Of activation,induced
R20017 T27491 T27489 arg2Of activation,by
R20018 T27491 T27490 arg1Of activation,PRR
R20019 T27494 T27492 arg1Of measured,","
R20020 T27494 T27493 arg2Of measured,were
R20021 T27494 T27495 arg1Of measured,as
R20022 T27496 T27495 arg2Of controls.,as
R20023 T27496 T27497 arg1Of controls.,(
R20024 T27498 T27499 arg1Of *,","
R20025 T27500 T27499 arg2Of p,","
R20026 T27502 T27497 arg2Of 0.05,(
R20027 T27502 T27498 arg1Of 0.05,*
R20028 T27502 T27501 arg1Of 0.05,<
R20029 T27502 T27503 arg1Of 0.05,;
R20030 T27504 T27503 arg2Of **,;
R20031 T27504 T27505 arg1Of **,","
R20032 T27506 T27505 arg2Of p,","
R20033 T27506 T27507 arg1Of p,<
R20034 T27506 T27508 arg1Of p,0.01
R20035 T27509 T27497 arg3Of ),(

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T27043 8-12 Antecedent denotes CD86
T27042 0-3 Antecedent denotes TNF
T27041 28-33 Anaphor denotes which
R19653 T27041 T27042 boundBy which,TNF
R19654 T27041 T27043 boundBy which,CD86

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T27070 0-3 Protein denotes TNF
T27073 52-57 Protein denotes TRAF6
T27072 42-47 Protein denotes IRAK1
T27071 8-12 Protein denotes CD86

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T27529 8-12 http://www.uniprot.org/uniprot/P42081 denotes CD86
T27527 0-3 http://www.uniprot.org/uniprot/P01375 denotes TNF
T27533 52-57 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6

sentences

Id Subject Object Predicate Lexical cue
T26970 0-142 Sentence denotes TNF and CD86 mRNAs, both of which require IRAK1 and TRAF6 to be induced by PRR activation, were measured as controls. (*, p<0.05; **, p<0.01).
T258 0-142 Sentence denotes TNF and CD86 mRNAs, both of which require IRAK1 and TRAF6 to be induced by PRR activation, were measured as controls. (*, p<0.05; **, p<0.01).

simple1

Id Subject Object Predicate Lexical cue
T27124 52-57 Protein denotes TRAF6
T27123 42-47 Protein denotes IRAK1
T27122 8-12 Protein denotes CD86
T27121 0-3 Protein denotes TNF

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T28243 34-41 Positive_regulation denotes require
T28242 64-71 Positive_regulation denotes induced
T28217 52-57 Protein denotes TRAF6
T28216 42-47 Protein denotes IRAK1
T28215 8-12 Protein denotes CD86
T28214 0-3 Protein denotes TNF
R20596 T28216 T28243 themeOf IRAK1,require
R20597 T28216 T28242 themeOf IRAK1,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T27661 52-57 Protein denotes TRAF6
T27660 42-47 Protein denotes IRAK1
T27659 8-12 Protein denotes CD86
T27658 0-3 Protein denotes TNF
T27684 64-71 Positive_regulation denotes induced
T27683 34-41 Positive_regulation denotes require
R20107 T27658 T27684 themeOf TNF,induced
R20108 T27660 T27683 themeOf IRAK1,require
R20109 T27660 T27684 themeOf IRAK1,induced

DLUT931

Id Subject Object Predicate Lexical cue
T27563 52-57 Protein denotes TRAF6
T27562 42-47 Protein denotes IRAK1
T27561 8-12 Protein denotes CD86
T27560 0-3 Protein denotes TNF
T27589 34-41 Positive_regulation denotes require
R20059 T27562 T27589 themeOf IRAK1,require
R20060 T27563 T27589 themeOf TRAF6,require

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T28321 72-89 Positive_regulation denotes by PRR activation
T28299 0-3 Protein denotes TNF
T28287 52-57 Protein denotes TRAF6
T28283 0-18 Protein denotes TNF and CD86 mRNAs
T28274 8-12 Protein denotes CD86
T28266 75-78 Protein denotes PRR
T28253 42-47 Protein denotes IRAK1
R20613 T28266 T28321 themeOf PRR,by PRR activation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T28187 141-142 . denotes .
T28186 140-141 -RRB- denotes )
T28185 136-140 CD denotes 0.01
T28184 135-136 NN denotes <
T28183 134-135 JJ denotes p
T28182 132-133 , denotes ,
T28181 130-132 SYM denotes **
T28180 128-129 : denotes ;
T28179 124-128 CD denotes 0.05
T28178 123-124 RB denotes <
T28177 122-123 VB denotes p
T28176 120-121 , denotes ,
T28175 119-120 SYM denotes *
T28174 118-119 -LRB- denotes (
T28173 116-117 . denotes .
T28172 108-116 NNS denotes controls
T28171 105-107 IN denotes as
T28170 96-104 VBN denotes measured
T28169 91-95 VBD denotes were
T28168 89-90 , denotes ,
T28167 79-89 NN denotes activation
T28166 75-78 NNP denotes PRR
T28165 72-74 IN denotes by
T28164 64-71 VBN denotes induced
T28163 61-63 VB denotes be
T28162 58-60 TO denotes to
T28161 52-57 CD denotes TRAF6
T28160 48-51 CC denotes and
T28159 42-47 CD denotes IRAK1
T28158 34-41 VBP denotes require
T28157 28-33 WDT denotes which
T28156 25-27 IN denotes of
T28155 20-24 DT denotes both
T28154 18-19 , denotes ,
T28153 13-18 NNP denotes mRNAs
T28152 8-12 NNP denotes CD86
T28151 4-7 CC denotes and
T28150 0-3 NNP denotes TNF
R20548 T28161 T28159 conj TRAF6,IRAK1
R20549 T28162 T28164 aux to,induced
R20550 T28163 T28164 auxpass be,induced
R20551 T28164 T28158 xcomp induced,require
R20552 T28165 T28164 agent by,induced
R20553 T28166 T28167 compound PRR,activation
R20554 T28167 T28165 pobj activation,by
R20555 T28168 T28170 punct ",",measured
R20556 T28169 T28170 auxpass were,measured
R20557 T28170 T28158 conj measured,require
R20558 T28171 T28170 prep as,measured
R20559 T28172 T28171 pobj controls,as
R20560 T28173 T28158 punct .,require
R20561 T28174 T28177 punct (,p
R20562 T28175 T28177 punct *,p
R20563 T28176 T28177 punct ",",p
R20564 T28177 T28177 ROOT p,p
R20565 T28178 T28177 advmod <,p
R20566 T28179 T28177 npadvmod 0.05,p
R20567 T28180 T28186 punct ;,)
R20568 T28181 T28186 punct **,)
R20569 T28182 T28186 punct ",",)
R20570 T28183 T28186 nmod p,)
R20571 T28184 T28185 compound <,0.01
R20572 T28185 T28183 npadvmod 0.01,p
R20573 T28186 T28177 punct ),p
R20574 T28187 T28177 punct .,p
R20537 T28150 T28158 nsubj TNF,require
R20538 T28151 T28150 cc and,TNF
R20539 T28152 T28153 compound CD86,mRNAs
R20540 T28153 T28150 conj mRNAs,TNF
R20541 T28154 T28153 punct ",",mRNAs
R20542 T28155 T28158 nsubj both,require
R20543 T28156 T28155 prep of,both
R20544 T28157 T28156 pobj which,of
R20545 T28158 T28158 ROOT require,require
R20546 T28159 T28158 dobj IRAK1,require
R20547 T28160 T28159 cc and,IRAK1

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T27737 34-41 Positive_regulation denotes require
T27736 34-41 Positive_regulation denotes require
T27735 75-78 Protein denotes PRR
T27734 52-57 Protein denotes TRAF6
T27733 42-47 Protein denotes IRAK1
T27732 8-18 Protein denotes CD86 mRNAs
T27731 0-3 Protein denotes TNF
T27739 64-71 Positive_regulation denotes induced
T27738 79-89 Positive_regulation denotes activation
R20146 T27733 T27736 themeOf IRAK1,require
R20147 T27734 T27737 themeOf TRAF6,require
R20148 T27735 T27738 themeOf PRR,activation
R20149 T27738 T27739 themeOf activation,induced

testone

Id Subject Object Predicate Lexical cue
T26880 64-71 Positive_regulation denotes induced
T26879 13-18 Transcription denotes mRNAs
T26865 52-57 Protein denotes TRAF6
T26864 42-47 Protein denotes IRAK1
T26863 8-12 Protein denotes CD86
T26862 0-3 Protein denotes TNF
R19566 T26862 T26879 themeOf TNF,mRNAs
R19567 T26863 T26879 themeOf CD86,mRNAs
R19568 T26864 T26880 themeOf IRAK1,induced
R19569 T26865 T26880 themeOf TRAF6,induced
R19576 T26879 T26880 themeOf mRNAs,induced

test3

Id Subject Object Predicate Lexical cue
T26958 64-71 Positive_regulation denotes induced
T26957 52-57 Protein denotes TRAF6
T26956 42-47 Protein denotes IRAK1
T26955 8-12 Protein denotes CD86
T26954 0-3 Protein denotes TNF
T26910 52-57 Protein denotes TRAF6
T26909 42-47 Protein denotes IRAK1
T26908 8-12 Protein denotes CD86
T26907 0-3 Protein denotes TNF
R19601 T26956 T26958 themeOf IRAK1,induced
R19602 T26957 T26958 themeOf TRAF6,induced