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PMC:3320587 / 4336-4579 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1505 242-243 -COMMA- denotes ,
T1504 234-242 NN denotes contrast
T1503 231-233 IN denotes By
T1502 226-229 NN denotes LTR
T1501 222-225 PRP-DOLLAR- denotes its
T1500 219-221 IN denotes in
T1499 212-218 NN denotes motifs
T1498 206-211 NN denotes NF-κB
T1497 199-205 JJ denotes tandem
T1496 195-198 CD denotes two
T1495 191-194 VB denotes has
T1494 189-190 -COMMA- denotes ,
T1493 180-189 NNP denotes Australia
T1492 176-179 CC denotes and
T1491 174-175 -COMMA- denotes ,
T1490 169-174 NNP denotes Japan
T1489 167-168 -COMMA- denotes ,
T1488 161-167 NNP denotes Europe
T1487 159-160 -COMMA- denotes ,
T1486 151-159 NNP denotes Americas
T1485 147-150 DT denotes the
T1484 144-146 IN denotes in
T1483 134-143 NN denotes infection
T1482 131-133 IN denotes of
T1481 125-130 NN denotes cause
T1480 117-124 JJ denotes primary
T1479 113-116 DT denotes the
T1478 109-112 CC denotes and
T1477 101-108 NN denotes subtype
T1476 95-100 JJ denotes viral
T1475 81-94 VB denotes characterized
T1474 74-80 RB denotes highly
T1473 69-73 RB denotes most
T1472 65-68 DT denotes the
T1471 63-64 -COMMA- denotes ,
T1470 62-63 NN denotes B
T1469 54-61 NN denotes subtype
T1468 48-53 NN denotes HIV-1
T1467 46-47 -COMMA- denotes ,
T1466 39-46 NN denotes example
T1465 35-38 IN denotes For
T1464 28-33 NN denotes sites
T1463 20-27 NN denotes binding
T1462 10-19 NN denotes activator
T1461 7-9 IN denotes of
R1031 T1464 T1461 arg2Of sites,of
R1032 T1464 T1462 arg1Of sites,activator
R1033 T1464 T1463 arg1Of sites,binding
R1034 T1466 T1465 arg2Of example,For
R1035 T1470 T1468 arg1Of B,HIV-1
R1036 T1470 T1469 arg1Of B,subtype
R1037 T1470 T1471 arg1Of B,","
R1038 T1470 T1478 arg1Of B,and
R1039 T1474 T1473 arg1Of highly,most
R1040 T1475 T1474 arg1Of characterized,highly
R1041 T1477 T1471 arg2Of subtype,","
R1042 T1477 T1472 arg1Of subtype,the
R1043 T1477 T1475 arg1Of subtype,characterized
R1044 T1477 T1476 arg1Of subtype,viral
R1045 T1478 T1495 arg1Of and,has
R1046 T1481 T1479 arg1Of cause,the
R1047 T1481 T1480 arg1Of cause,primary
R1048 T1481 T1482 arg1Of cause,of
R1049 T1481 T1484 arg1Of cause,in
R1050 T1481 T1487 arg1Of cause,","
R1051 T1483 T1482 arg2Of infection,of
R1052 T1486 T1484 arg2Of Americas,in
R1053 T1486 T1485 arg1Of Americas,the
R1054 T1487 T1478 arg2Of ",",and
R1055 T1488 T1489 arg1Of Europe,","
R1056 T1489 T1492 arg1Of ",",and
R1057 T1490 T1489 arg2Of Japan,","
R1058 T1492 T1487 arg2Of and,","
R1059 T1492 T1491 arg1Of and,","
R1060 T1493 T1492 arg2Of Australia,and
R1061 T1495 T1465 arg1Of has,For
R1062 T1495 T1467 arg1Of has,","
R1063 T1495 T1494 arg1Of has,","
R1064 T1499 T1495 arg2Of motifs,has
R1065 T1499 T1496 arg1Of motifs,two
R1066 T1499 T1497 arg1Of motifs,tandem
R1067 T1499 T1498 arg1Of motifs,NF-κB
R1068 T1499 T1500 arg1Of motifs,in
R1069 T1502 T1500 arg2Of LTR,in
R1070 T1502 T1501 arg1Of LTR,its
R1071 T1504 T1503 arg2Of contrast,By

GO-BP

Id Subject Object Predicate Lexical cue
T1024 10-27 http://purl.obolibrary.org/obo/GO_0051099 denotes activator binding

GO-MF

Id Subject Object Predicate Lexical cue
T1040 20-27 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T934 35-230 Sentence denotes For example, HIV-1 subtype B, the most highly characterized viral subtype and the primary cause of infection in the Americas, Europe, Japan, and Australia, has two tandem NF-κB motifs in its LTR.
T26 35-230 Sentence denotes For example, HIV-1 subtype B, the most highly characterized viral subtype and the primary cause of infection in the Americas, Europe, Japan, and Australia, has two tandem NF-κB motifs in its LTR.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2771 7-33 Entity denotes of activator binding sites
T2734 28-33 Entity denotes sites
T2696 206-211 Protein denotes NF-κB

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2344 242-243 , denotes ,
T2343 234-242 NN denotes contrast
T2342 231-233 IN denotes By
T2341 229-230 . denotes .
T2340 226-229 NNP denotes LTR
T2339 222-225 PRP$ denotes its
T2338 219-221 IN denotes in
T2337 212-218 NNS denotes motifs
T2336 206-211 NN denotes NF-κB
T2335 199-205 NN denotes tandem
T2334 195-198 CD denotes two
T2333 191-194 VBZ denotes has
T2332 189-190 , denotes ,
T2331 180-189 NNP denotes Australia
T2330 176-179 CC denotes and
T2329 174-175 , denotes ,
T2328 169-174 NNP denotes Japan
T2327 167-168 , denotes ,
T2326 161-167 NNP denotes Europe
T2325 159-160 , denotes ,
T2324 151-159 NNPS denotes Americas
T2323 147-150 DT denotes the
T2322 144-146 IN denotes in
T2321 134-143 NN denotes infection
T2320 131-133 IN denotes of
T2319 125-130 NN denotes cause
T2318 117-124 JJ denotes primary
T2317 113-116 DT denotes the
T2316 109-112 CC denotes and
T2315 101-108 NN denotes subtype
T2314 95-100 JJ denotes viral
T2313 81-94 VBN denotes characterized
T2312 74-80 RB denotes highly
T2311 69-73 RBS denotes most
T2310 65-68 DT denotes the
T2309 63-64 , denotes ,
T2308 62-63 NNP denotes B
T2307 54-61 NN denotes subtype
T2306 48-53 JJ denotes HIV-1
T2305 46-47 , denotes ,
T2304 39-46 NN denotes example
T2303 35-38 IN denotes For
T2302 33-34 . denotes .
T2301 28-33 NNS denotes sites
T2300 20-27 JJ denotes binding
T2299 10-19 NN denotes activator
T2298 7-9 IN denotes of
R1718 T2299 T2301 amod activator,sites
R1719 T2300 T2301 amod binding,sites
R1720 T2301 T2298 pobj sites,of
R1722 T2303 T2333 prep For,has
R1724 T2304 T2303 pobj example,For
R1725 T2305 T2333 punct ",",has
R1727 T2306 T2308 compound HIV-1,B
R1728 T2307 T2308 compound subtype,B
R1729 T2308 T2333 nsubj B,has
R1731 T2309 T2308 punct ",",B
R1732 T2310 T2315 det the,subtype
R1733 T2311 T2313 advmod most,characterized
R1735 T2312 T2313 advmod highly,characterized
R1736 T2313 T2315 amod characterized,subtype
R1737 T2314 T2315 amod viral,subtype
R1739 T2315 T2308 appos subtype,B
R1740 T2316 T2315 cc and,subtype
R1741 T2317 T2319 det the,cause
R1742 T2318 T2319 amod primary,cause
R1744 T2319 T2315 conj cause,subtype
R1745 T2320 T2319 prep of,cause
R1746 T2321 T2320 pobj infection,of
R1748 T2322 T2321 prep in,infection
R1750 T2323 T2324 det the,Americas
R1752 T2324 T2322 pobj Americas,in
R1753 T2325 T2324 punct ",",Americas
R1755 T2326 T2324 conj Europe,Americas
R1756 T2327 T2326 punct ",",Europe
R1757 T2328 T2326 conj Japan,Europe
R1759 T2329 T2328 punct ",",Japan
R1760 T2330 T2328 cc and,Japan
R1761 T2331 T2328 conj Australia,Japan
R1763 T2332 T2333 punct ",",has
R1764 T2333 T2333 ROOT has,has
R1766 T2334 T2337 nummod two,motifs
R1767 T2335 T2337 nmod tandem,motifs
R1768 T2336 T2337 compound NF-κB,motifs
R1769 T2337 T2333 dobj motifs,has
R1770 T2338 T2333 prep in,has
R1772 T2339 T2340 poss its,LTR
R1773 T2340 T2338 pobj LTR,in
R1774 T2341 T2333 punct .,has
R1777 T2343 T2342 pobj contrast,By

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1902 191-194 Binding denotes has
T1901 199-218 Protein denotes tandem NF-κB motifs
R1403 T1901 T1902 themeOf tandem NF-κB motifs,has