PMC:3320587 / 42868-43094 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T27345","span":{"begin":216,"end":225},"obj":"NN"},{"id":"T27344","span":{"begin":212,"end":215},"obj":"NN"},{"id":"T27343","span":{"begin":209,"end":211},"obj":"IN"},{"id":"T27342","span":{"begin":200,"end":208},"obj":"NN"},{"id":"T27341","span":{"begin":197,"end":199},"obj":"CC"},{"id":"T27340","span":{"begin":189,"end":196},"obj":"NN"},{"id":"T27339","span":{"begin":185,"end":188},"obj":"DT"},{"id":"T27338","span":{"begin":183,"end":184},"obj":"-COMMA-"},{"id":"T27337","span":{"begin":179,"end":183},"obj":"CC"},{"id":"T27336","span":{"begin":176,"end":178},"obj":"IN"},{"id":"T27335","span":{"begin":174,"end":175},"obj":"-RRB-"},{"id":"T27334","span":{"begin":170,"end":174},"obj":"NN"},{"id":"T27333","span":{"begin":165,"end":169},"obj":"JJ"},{"id":"T27332","span":{"begin":164,"end":165},"obj":"-LRB-"},{"id":"T27331","span":{"begin":158,"end":163},"obj":"NN"},{"id":"T27330","span":{"begin":150,"end":157},"obj":"NN"},{"id":"T27329","span":{"begin":145,"end":149},"obj":"IN"},{"id":"T27328","span":{"begin":134,"end":144},"obj":"VB"},{"id":"T27327","span":{"begin":128,"end":133},"obj":"NN"},{"id":"T27326","span":{"begin":124,"end":127},"obj":"DT"},{"id":"T27325","span":{"begin":119,"end":123},"obj":"IN"},{"id":"T27324","span":{"begin":110,"end":118},"obj":"VB"},{"id":"T27323","span":{"begin":108,"end":109},"obj":"-RRB-"},{"id":"T27322","span":{"begin":104,"end":108},"obj":"NN"},{"id":"T27321","span":{"begin":98,"end":103},"obj":"JJ"},{"id":"T27320","span":{"begin":97,"end":98},"obj":"-LRB-"},{"id":"T27319","span":{"begin":91,"end":96},"obj":"NN"},{"id":"T27318","span":{"begin":76,"end":90},"obj":"JJ"},{"id":"T27317","span":{"begin":71,"end":75},"obj":"IN"},{"id":"T27316","span":{"begin":60,"end":70},"obj":"VB"},{"id":"T27315","span":{"begin":54,"end":59},"obj":"NN"},{"id":"T27314","span":{"begin":50,"end":53},"obj":"DT"},{"id":"T27313","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T27312","span":{"begin":37,"end":46},"obj":"VB"},{"id":"T27311","span":{"begin":23,"end":36},"obj":"RB"},{"id":"T27310","span":{"begin":18,"end":22},"obj":"VB"},{"id":"T27309","span":{"begin":11,"end":17},"obj":"NN"},{"id":"T27308","span":{"begin":6,"end":10},"obj":"NN"},{"id":"T27307","span":{"begin":0,"end":5},"obj":"NN"}],"relations":[{"id":"R19822","pred":"arg1Of","subj":"T27309","obj":"T27307"},{"id":"R19823","pred":"arg1Of","subj":"T27309","obj":"T27308"},{"id":"R19824","pred":"arg1Of","subj":"T27309","obj":"T27310"},{"id":"R19825","pred":"arg2Of","subj":"T27309","obj":"T27312"},{"id":"R19826","pred":"arg2Of","subj":"T27312","obj":"T27310"},{"id":"R19827","pred":"arg1Of","subj":"T27312","obj":"T27311"},{"id":"R19828","pred":"arg1Of","subj":"T27312","obj":"T27313"},{"id":"R19829","pred":"arg1Of","subj":"T27312","obj":"T27324"},{"id":"R19830","pred":"arg2Of","subj":"T27315","obj":"T27313"},{"id":"R19831","pred":"arg1Of","subj":"T27315","obj":"T27314"},{"id":"R19832","pred":"arg2Of","subj":"T27315","obj":"T27316"},{"id":"R19833","pred":"arg1Of","subj":"T27316","obj":"T27317"},{"id":"R19834","pred":"arg2Of","subj":"T27319","obj":"T27317"},{"id":"R19835","pred":"arg1Of","subj":"T27319","obj":"T27318"},{"id":"R19836","pred":"arg1Of","subj":"T27319","obj":"T27320"},{"id":"R19837","pred":"arg2Of","subj":"T27322","obj":"T27320"},{"id":"R19838","pred":"arg1Of","subj":"T27322","obj":"T27321"},{"id":"R19839","pred":"arg3Of","subj":"T27323","obj":"T27320"},{"id":"R19840","pred":"arg2Of","subj":"T27325","obj":"T27324"},{"id":"R19841","pred":"arg2Of","subj":"T27327","obj":"T27325"},{"id":"R19842","pred":"arg1Of","subj":"T27327","obj":"T27326"},{"id":"R19843","pred":"arg2Of","subj":"T27327","obj":"T27328"},{"id":"R19844","pred":"arg1Of","subj":"T27328","obj":"T27329"},{"id":"R19845","pred":"arg2Of","subj":"T27331","obj":"T27329"},{"id":"R19846","pred":"arg1Of","subj":"T27331","obj":"T27330"},{"id":"R19847","pred":"arg1Of","subj":"T27331","obj":"T27332"},{"id":"R19848","pred":"arg1Of","subj":"T27331","obj":"T27336"},{"id":"R19849","pred":"arg2Of","subj":"T27334","obj":"T27332"},{"id":"R19850","pred":"arg1Of","subj":"T27334","obj":"T27333"},{"id":"R19851","pred":"arg3Of","subj":"T27335","obj":"T27332"},{"id":"R19852","pred":"arg1Of","subj":"T27336","obj":"T27337"},{"id":"R19853","pred":"arg1Of","subj":"T27340","obj":"T27341"},{"id":"R19854","pred":"arg2Of","subj":"T27341","obj":"T27336"},{"id":"R19855","pred":"arg1Of","subj":"T27341","obj":"T27338"},{"id":"R19856","pred":"arg1Of","subj":"T27341","obj":"T27339"},{"id":"R19857","pred":"arg1Of","subj":"T27341","obj":"T27343"},{"id":"R19858","pred":"arg2Of","subj":"T27342","obj":"T27341"},{"id":"R19859","pred":"arg2Of","subj":"T27345","obj":"T27343"},{"id":"R19860","pred":"arg1Of","subj":"T27345","obj":"T27344"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T27056","span":{"begin":76,"end":81},"obj":"Protein"},{"id":"T27055","span":{"begin":0,"end":5},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T27520","span":{"begin":0,"end":5},"obj":"http://www.uniprot.org/uniprot/O94916"},{"id":"T27513","span":{"begin":76,"end":81},"obj":"http://www.uniprot.org/uniprot/Q99836"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T27085","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T27084","span":{"begin":54,"end":59},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    sentences

    {"project":"sentences","denotations":[{"id":"T26965","span":{"begin":0,"end":226},"obj":"Sentence"},{"id":"T252","span":{"begin":0,"end":226},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    simple1

    {"project":"simple1","denotations":[{"id":"T27107","span":{"begin":76,"end":81},"obj":"Protein"},{"id":"T27106","span":{"begin":0,"end":5},"obj":"Protein"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T28230","span":{"begin":37,"end":46},"obj":"Negative_regulation"},{"id":"T28229","span":{"begin":11,"end":17},"obj":"Transcription"},{"id":"T28200","span":{"begin":76,"end":81},"obj":"Protein"},{"id":"T28199","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R20583","pred":"themeOf","subj":"T28199","obj":"T28229"},{"id":"R20584","pred":"themeOf","subj":"T28199","obj":"T28230"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T27644","span":{"begin":76,"end":81},"obj":"Protein"},{"id":"T27643","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T27672","span":{"begin":37,"end":46},"obj":"Negative_regulation"}],"relations":[{"id":"R20095","pred":"themeOf","subj":"T27643","obj":"T27672"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T27546","span":{"begin":76,"end":81},"obj":"Protein"},{"id":"T27545","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T27576","span":{"begin":37,"end":46},"obj":"Negative_regulation"},{"id":"T27575","span":{"begin":11,"end":17},"obj":"Transcription"}],"relations":[{"id":"R20044","pred":"themeOf","subj":"T27545","obj":"T27575"},{"id":"R20066","pred":"themeOf","subj":"T27575","obj":"T27576"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T28331","span":{"begin":209,"end":225},"obj":"Regulation"},{"id":"T28312","span":{"begin":0,"end":17},"obj":"Protein"},{"id":"T28308","span":{"begin":76,"end":109},"obj":"Protein"},{"id":"T28298","span":{"begin":158,"end":175},"obj":"Protein"},{"id":"T28280","span":{"begin":76,"end":90},"obj":"Protein"},{"id":"T28268","span":{"begin":119,"end":157},"obj":"Entity"},{"id":"T28265","span":{"begin":50,"end":157},"obj":"Entity"},{"id":"T28256","span":{"begin":6,"end":10},"obj":"Protein"},{"id":"T28255","span":{"begin":212,"end":215},"obj":"Protein"}],"relations":[{"id":"R20611","pred":"themeOf","subj":"T28255","obj":"T28331"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T28011","span":{"begin":225,"end":226},"obj":"."},{"id":"T28010","span":{"begin":216,"end":225},"obj":"NN"},{"id":"T28009","span":{"begin":212,"end":215},"obj":"NNP"},{"id":"T28008","span":{"begin":209,"end":211},"obj":"IN"},{"id":"T28007","span":{"begin":200,"end":208},"obj":"NN"},{"id":"T28006","span":{"begin":197,"end":199},"obj":"CC"},{"id":"T28005","span":{"begin":189,"end":196},"obj":"NN"},{"id":"T28004","span":{"begin":185,"end":188},"obj":"DT"},{"id":"T28003","span":{"begin":183,"end":184},"obj":","},{"id":"T28002","span":{"begin":179,"end":183},"obj":"DT"},{"id":"T28001","span":{"begin":176,"end":178},"obj":"IN"},{"id":"T28000","span":{"begin":174,"end":175},"obj":"-RRB-"},{"id":"T27999","span":{"begin":170,"end":174},"obj":"NNS"},{"id":"T27998","span":{"begin":165,"end":169},"obj":"JJ"},{"id":"T27997","span":{"begin":164,"end":165},"obj":"-LRB-"},{"id":"T27996","span":{"begin":158,"end":163},"obj":"NNP"},{"id":"T27995","span":{"begin":150,"end":157},"obj":"NN"},{"id":"T27994","span":{"begin":145,"end":149},"obj":"IN"},{"id":"T27993","span":{"begin":134,"end":144},"obj":"VBN"},{"id":"T27992","span":{"begin":128,"end":133},"obj":"NNS"},{"id":"T27991","span":{"begin":124,"end":127},"obj":"DT"},{"id":"T27990","span":{"begin":119,"end":123},"obj":"IN"},{"id":"T27989","span":{"begin":110,"end":118},"obj":"VBN"},{"id":"T27988","span":{"begin":108,"end":109},"obj":"-RRB-"},{"id":"T27987","span":{"begin":104,"end":108},"obj":"NNS"},{"id":"T27986","span":{"begin":98,"end":103},"obj":"JJ"},{"id":"T27985","span":{"begin":97,"end":98},"obj":"-LRB-"},{"id":"T27984","span":{"begin":91,"end":96},"obj":"NNP"},{"id":"T27983","span":{"begin":76,"end":90},"obj":"JJ"},{"id":"T27982","span":{"begin":71,"end":75},"obj":"IN"},{"id":"T27981","span":{"begin":60,"end":70},"obj":"VBN"},{"id":"T27980","span":{"begin":54,"end":59},"obj":"NNS"},{"id":"T27979","span":{"begin":50,"end":53},"obj":"DT"},{"id":"T27978","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T27977","span":{"begin":37,"end":46},"obj":"VBN"},{"id":"T27976","span":{"begin":23,"end":36},"obj":"RB"},{"id":"T27975","span":{"begin":18,"end":22},"obj":"VBD"},{"id":"T27974","span":{"begin":11,"end":17},"obj":"NNS"},{"id":"T27973","span":{"begin":6,"end":10},"obj":"NNP"},{"id":"T27972","span":{"begin":0,"end":5},"obj":"CD"}],"relations":[{"id":"R20359","pred":"nummod","subj":"T27972","obj":"T27974"},{"id":"R20360","pred":"compound","subj":"T27973","obj":"T27974"},{"id":"R20361","pred":"nsubjpass","subj":"T27974","obj":"T27977"},{"id":"R20362","pred":"auxpass","subj":"T27975","obj":"T27977"},{"id":"R20363","pred":"advmod","subj":"T27976","obj":"T27977"},{"id":"R20364","pred":"ROOT","subj":"T27977","obj":"T27977"},{"id":"R20365","pred":"prep","subj":"T27978","obj":"T27977"},{"id":"R20366","pred":"det","subj":"T27979","obj":"T27980"},{"id":"R20367","pred":"pobj","subj":"T27980","obj":"T27978"},{"id":"R20368","pred":"conj","subj":"T27981","obj":"T27977"},{"id":"R20369","pred":"prep","subj":"T27982","obj":"T27981"},{"id":"R20370","pred":"compound","subj":"T27983","obj":"T27984"},{"id":"R20371","pred":"pobj","subj":"T27984","obj":"T27982"},{"id":"R20372","pred":"punct","subj":"T27985","obj":"T27987"},{"id":"R20373","pred":"amod","subj":"T27986","obj":"T27987"},{"id":"R20374","pred":"appos","subj":"T27987","obj":"T27984"},{"id":"R20375","pred":"punct","subj":"T27988","obj":"T27981"},{"id":"R20376","pred":"prep","subj":"T27989","obj":"T27977"},{"id":"R20377","pred":"prep","subj":"T27990","obj":"T27989"},{"id":"R20378","pred":"det","subj":"T27991","obj":"T27992"},{"id":"R20379","pred":"pobj","subj":"T27992","obj":"T27990"},{"id":"R20380","pred":"acl","subj":"T27993","obj":"T27992"},{"id":"R20381","pred":"prep","subj":"T27994","obj":"T27993"},{"id":"R20382","pred":"compound","subj":"T27995","obj":"T27996"},{"id":"R20383","pred":"pobj","subj":"T27996","obj":"T27994"},{"id":"R20384","pred":"punct","subj":"T27997","obj":"T27996"},{"id":"R20385","pred":"amod","subj":"T27998","obj":"T27999"},{"id":"R20386","pred":"appos","subj":"T27999","obj":"T27996"},{"id":"R20387","pred":"punct","subj":"T28000","obj":"T27996"},{"id":"R20388","pred":"prep","subj":"T28001","obj":"T27993"},{"id":"R20389","pred":"pobj","subj":"T28002","obj":"T28001"},{"id":"R20390","pred":"punct","subj":"T28003","obj":"T27977"},{"id":"R20391","pred":"det","subj":"T28004","obj":"T28005"},{"id":"R20392","pred":"dobj","subj":"T28005","obj":"T27977"},{"id":"R20393","pred":"cc","subj":"T28006","obj":"T28005"},{"id":"R20394","pred":"conj","subj":"T28007","obj":"T28005"},{"id":"R20395","pred":"prep","subj":"T28008","obj":"T28005"},{"id":"R20396","pred":"compound","subj":"T28009","obj":"T28010"},{"id":"R20397","pred":"pobj","subj":"T28010","obj":"T28008"},{"id":"R20398","pred":"punct","subj":"T28011","obj":"T27977"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T27706","span":{"begin":37,"end":46},"obj":"Negative_regulation"},{"id":"T27705","span":{"begin":76,"end":81},"obj":"Protein"},{"id":"T27704","span":{"begin":0,"end":10},"obj":"Protein"}],"relations":[{"id":"R20128","pred":"themeOf","subj":"T27704","obj":"T27706"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    testone

    {"project":"testone","denotations":[{"id":"T26848","span":{"begin":76,"end":81},"obj":"Protein"},{"id":"T26847","span":{"begin":0,"end":5},"obj":"Protein"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}

    test3

    {"project":"test3","denotations":[{"id":"T26932","span":{"begin":76,"end":81},"obj":"Protein"},{"id":"T26931","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T26893","span":{"begin":76,"end":81},"obj":"Protein"},{"id":"T26892","span":{"begin":0,"end":5},"obj":"Protein"}],"text":"NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection."}