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2_test

Id Subject Object Predicate Lexical cue
22496647-17457343-98010799 3138-3140 17457343 denotes 53
22496647-10588727-98010800 3784-3786 10588727 denotes 21
22496647-11238656-98010801 3790-3792 11238656 denotes 54
22496647-15599404-98010802 3796-3798 15599404 denotes 55
22496647-15599404-98010803 3936-3938 15599404 denotes 55
22496647-15258598-98010804 3942-3944 15258598 denotes 56

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15603 5189-5194 NN denotes TRAF6
T27509 3057-3058 -RRB- denotes )
T27508 3053-3057 CD denotes 0.01
T27507 3052-3053 SYM denotes <
T27506 3051-3052 NN denotes p
T27505 3049-3050 -COMMA- denotes ,
T27504 3047-3049 SYM denotes **
T27503 3045-3046 -COLON- denotes ;
T27502 3041-3045 CD denotes 0.05
T27501 3040-3041 SYM denotes <
T27500 3039-3040 NN denotes p
T27499 3037-3038 -COMMA- denotes ,
T27498 3036-3037 SYM denotes *
T27497 3035-3036 -LRB- denotes (
T27496 3025-3034 NN denotes controls.
T27495 3022-3024 IN denotes as
T27494 3013-3021 VB denotes measured
T27493 3008-3012 VB denotes were
T27492 3006-3007 -COMMA- denotes ,
T27491 2996-3006 NN denotes activation
T27490 2992-2995 NN denotes PRR
T27489 2989-2991 IN denotes by
T27488 2981-2988 VB denotes induced
T27487 2978-2980 VB denotes be
T27486 2975-2977 TO denotes to
T27485 2969-2974 NN denotes TRAF6
T27484 2965-2968 CC denotes and
T27483 2959-2964 NN denotes IRAK1
T27482 2951-2958 VB denotes require
T27481 2945-2950 WDT denotes which
T27480 2942-2944 IN denotes of
T27479 2937-2941 DT denotes both
T27478 2935-2936 -COMMA- denotes ,
T27477 2930-2935 NN denotes mRNAs
T27476 2925-2929 NN denotes CD86
T27475 2921-2924 CC denotes and
T27474 2917-2920 NN denotes TNF
T27473 2914-2915 -RRB- denotes )
T27472 2910-2914 NN denotes bars
T27471 2905-2909 JJ denotes open
T27470 2904-2905 -LRB- denotes (
T27469 2898-2903 NN denotes shRNA
T27468 2890-2897 NN denotes control
T27467 2879-2889 VB denotes expressing
T27466 2873-2878 NN denotes cells
T27465 2870-2872 TO denotes to
T27464 2861-2869 VB denotes compared
T27463 2859-2860 -RRB- denotes )
T27462 2855-2859 NN denotes bars
T27461 2849-2854 JJ denotes black
T27460 2848-2849 -LRB- denotes (
T27459 2842-2847 NN denotes shRNA
T27458 2840-2841 -RRB- denotes )
T27457 2839-2840 NN denotes D
T27456 2838-2839 -LRB- denotes (
T27455 2832-2837 NN denotes TRAF6
T27454 2829-2831 CC denotes or
T27453 2827-2828 -RRB- denotes )
T27452 2826-2827 NN denotes C
T27451 2825-2826 -LRB- denotes (
T27450 2819-2824 NN denotes IRAK1
T27449 2812-2818 CC denotes either
T27448 2801-2811 VB denotes expressing
T27447 2795-2800 NN denotes cells
T27446 2782-2794 JJ denotes MTb-infected
T27445 2778-2781 DT denotes the
T27444 2775-2777 IN denotes in
T27443 2765-2774 VB denotes inhibited
T27442 2751-2764 RB denotes significantly
T27441 2747-2750 VB denotes was
T27440 2736-2746 NN denotes expression
T27439 2730-2735 NN denotes NFAT5
T27438 2720-2728 VB denotes analyzed
T27437 2716-2719 VB denotes was
T27436 2712-2715 NN denotes RNA
T27435 2708-2711 CC denotes and
T27434 2706-2707 -COMMA- denotes ,
T27433 2702-2706 NN denotes 37°C
T27432 2699-2701 IN denotes at
T27431 2693-2698 NN denotes hours
T27430 2690-2692 CD denotes 16
T27429 2686-2689 IN denotes for
T27428 2675-2685 JJ denotes uninfected
T27427 2670-2674 VB denotes left
T27426 2667-2669 CC denotes or
T27425 2659-2666 NN denotes CDC1551
T27424 2652-2658 NN denotes strain
T27423 2648-2651 NN denotes MTb
T27422 2643-2647 IN denotes with
T27421 2634-2642 VB denotes infected
T27420 2629-2633 VB denotes were
T27419 2623-2628 NN denotes Cells
T27418 2619-2621 NN denotes 7B
T27417 2616-2618 IN denotes in
T27416 2606-2615 VB denotes described
T27415 2603-2605 IN denotes as
T27414 2598-2602 VB denotes used
T27413 2593-2597 VB denotes were
T27412 2587-2592 NN denotes shRNA
T27411 2579-2586 NN denotes control
T27410 2568-2578 VB denotes expressing
T27409 2562-2567 NN denotes cells
T27408 2556-2561 NN denotes THP-1
T27407 2547-2555 NN denotes Methods.
T27406 2543-2546 CC denotes and
T27405 2533-2542 NNP denotes Materials
T27404 2530-2532 IN denotes in
T27403 2520-2529 VB denotes described
T27402 2517-2519 IN denotes as
T27401 2505-2516 VB denotes constructed
T27400 2500-2504 VB denotes were
T27399 2494-2499 NN denotes shRNA
T27398 2479-2493 JJ denotes TRAF6-specific
T27397 2476-2478 CC denotes or
T27396 2469-2475 NN denotes IRAK1-
T27395 2446-2468 JJ denotes lentivirally-delivered
T27394 2438-2445 VB denotes express
T27393 2423-2437 RB denotes constitutively
T27392 2418-2422 WDT denotes that
T27391 2412-2417 NN denotes cells
T27390 2406-2411 NN denotes THP-1
T27389 2395-2404 NN denotes monocytes
T27388 2389-2394 JJ denotes human
T27387 2386-2388 IN denotes in
T27386 2375-2385 NN denotes expression
T27385 2370-2374 NN denotes gene
T27384 2364-2369 NN denotes NFAT5
T27383 2361-2363 IN denotes of
T27382 2351-2360 NN denotes induction
T27381 2347-2350 NN denotes MTb
T27380 2343-2346 IN denotes for
T27379 2334-2342 VB denotes required
T27378 2330-2333 VB denotes are
T27377 2324-2329 NN denotes TRAF6
T27376 2320-2323 CC denotes and
T27375 2314-2319 NN denotes IRAK1
T27374 2312-2313 -RRB- denotes )
T27373 2311-2312 NN denotes D
T27372 2309-2310 -COMMA- denotes ,
T27371 2308-2309 NN denotes C
T27370 2307-2308 -LRB- denotes (
T27369 2297-2306 NN denotes controls.
T27368 2294-2296 IN denotes as
T27367 2285-2293 VB denotes measured
T27366 2280-2284 VB denotes were
T27365 2278-2279 -COMMA- denotes ,
T27364 2269-2278 NN denotes infection
T27363 2265-2268 NN denotes MTb
T27362 2258-2264 IN denotes during
T27361 2256-2257 -COMMA- denotes ,
T27360 2244-2256 RB denotes respectively
T27359 2242-2243 -COMMA- denotes ,
T27358 2230-2242 JJ denotes -independent
T27357 2226-2229 CC denotes and
T27356 2210-2225 JJ denotes MyD88-dependent
T27355 2206-2209 VB denotes are
T27354 2200-2205 WDT denotes which
T27353 2197-2199 IN denotes of
T27352 2186-2196 NN denotes expression
T27351 2182-2185 DT denotes the
T27215 1416-1420 NN denotes mRNA
T27214 1410-1415 NN denotes NFAT5
T27213 1400-1408 VB denotes measured
T27212 1395-1399 VB denotes were
T27211 1388-1394 NN denotes levels
T27210 1383-1387 NN denotes mRNA
T27209 1377-1382 NN denotes NFAT5
T27208 1375-1376 -COMMA- denotes ,
T27207 1370-1375 NN denotes hours
T27206 1367-1369 CD denotes 16
T27205 1361-1366 IN denotes After
T27204 1350-1359 JJ denotes untreated
T27203 1345-1349 VB denotes left
T27202 1342-1344 CC denotes or
T27201 1340-1341 -COMMA- denotes ,
T27200 1339-1340 -RRB- denotes )
T27199 1326-1339 NN denotes cells∶bacilli
T27198 1322-1325 CD denotes 1∶1
T27197 1321-1322 -LRB- denotes (
T27196 1313-1320 NN denotes CDC1551
T27195 1306-1312 NN denotes strain
T27194 1302-1305 NN denotes MTb
T27193 1297-1301 IN denotes with
T27192 1288-1296 VB denotes infected
T27191 1286-1287 -COMMA- denotes ,
T27190 1285-1286 -RRB- denotes )
T27189 1280-1285 NN denotes µg/ml
T27188 1278-1279 CD denotes 5
T27187 1277-1278 -LRB- denotes (
T27186 1269-1276 NN denotes Pam3Cys
T27185 1262-1268 NN denotes ligand
T27184 1248-1261 JJ denotes TLR2-specific
T27183 1244-1247 DT denotes the
T27182 1239-1243 IN denotes with
T27181 1229-1238 VB denotes incubated
T27180 1224-1228 VB denotes were
T27179 1218-1223 NN denotes cells
T27178 1212-1217 NN denotes THP-1
T27177 1201-1210 NN denotes monocytes
T27176 1198-1200 IN denotes in
T27175 1188-1197 NN denotes synthesis
T27174 1183-1187 NN denotes mRNA
T27173 1177-1182 NN denotes NFAT5
T27172 1168-1176 VB denotes enhances
T27171 1154-1167 RB denotes significantly
T27170 1149-1153 NN denotes TLR2
T27169 1146-1148 IN denotes of
T27168 1135-1145 NN denotes Engagement
T27167 1133-1134 -RRB- denotes )
T27166 1132-1133 NN denotes A
T27165 1131-1132 -LRB- denotes (
T27164 1120-1129 NN denotes monocytes
T27163 1114-1119 JJ denotes human
T27162 1111-1113 IN denotes in
T27161 1100-1110 NN denotes expression
T27160 1094-1099 NN denotes NFAT5
T27159 1091-1093 IN denotes of
T27158 1081-1090 NN denotes induction
T27157 1077-1080 NN denotes MTb
T27156 1073-1076 IN denotes for
T27155 1063-1072 JJ denotes important
T27154 1060-1062 VB denotes is
T27153 1052-1059 NN denotes cascade
T27152 1042-1051 NN denotes signaling
T27151 1027-1041 JJ denotes MyD88-mediated
T27150 1023-1026 DT denotes The
T27350 2180-2181 -COMMA- denotes ,
T27349 2175-2180 NN denotes mRNAs
T27348 2170-2174 NN denotes CD86
T27347 2166-2169 CC denotes and
T27346 2162-2165 NN denotes TNF
T27345 2151-2160 NN denotes infection
T27344 2147-2150 NN denotes MTb
T27343 2144-2146 IN denotes of
T27342 2135-2143 NN denotes presence
T27341 2132-2134 CC denotes or
T27340 2124-2131 NN denotes absence
T27339 2120-2123 DT denotes the
T27338 2118-2119 -COMMA- denotes ,
T27337 2114-2118 CC denotes both
T27336 2111-2113 IN denotes in
T27335 2109-2110 -RRB- denotes )
T27334 2105-2109 NN denotes bars
T27333 2100-2104 JJ denotes open
T27332 2099-2100 -LRB- denotes (
T27331 2093-2098 NN denotes shRNA
T27330 2085-2092 NN denotes control
T27329 2080-2084 IN denotes with
T27328 2069-2079 VB denotes transduced
T27327 2063-2068 NN denotes cells
T27326 2059-2062 DT denotes the
T27325 2054-2058 IN denotes with
T27324 2045-2053 VB denotes compared
T27323 2043-2044 -RRB- denotes )
T27322 2039-2043 NN denotes bars
T27321 2033-2038 JJ denotes black
T27320 2032-2033 -LRB- denotes (
T27319 2026-2031 NN denotes shRNA
T27318 2011-2025 JJ denotes MyD88-specific
T27317 2006-2010 IN denotes with
T27316 1995-2005 VB denotes transduced
T27315 1989-1994 NN denotes cells
T27314 1985-1988 DT denotes the
T27313 1982-1984 IN denotes in
T27312 1972-1981 VB denotes inhibited
T27311 1958-1971 RB denotes significantly
T27310 1953-1957 VB denotes were
T27309 1946-1952 NN denotes levels
T27308 1941-1945 NN denotes mRNA
T27307 1935-1940 NN denotes NFAT5
T27306 1925-1933 VB denotes analyzed
T27305 1921-1924 VB denotes was
T27304 1917-1920 NN denotes RNA
T27303 1913-1916 CC denotes and
T27302 1911-1912 -COMMA- denotes ,
T27301 1907-1911 NN denotes 37°C
T27300 1904-1906 IN denotes at
T27299 1898-1903 NN denotes hours
T27298 1895-1897 CD denotes 16
T27297 1891-1894 IN denotes for
T27296 1880-1890 JJ denotes uninfected
T27295 1875-1879 VB denotes left
T27294 1872-1874 CC denotes or
T27293 1870-1871 -RRB- denotes )
T27292 1857-1870 NN denotes cells∶bacilli
T27291 1853-1856 CD denotes 1∶1
T27290 1852-1853 -LRB- denotes (
T27289 1844-1851 NN denotes CDC1551
T27288 1837-1843 NN denotes strain
T27287 1833-1836 NN denotes MTb
T27286 1828-1832 IN denotes with
T27285 1819-1827 VB denotes infected
T27284 1814-1818 VB denotes were
T27283 1808-1813 NNP denotes Cells
T27282 1799-1807 NNP denotes Methods.
T27281 1795-1798 CC denotes and
T27280 1785-1794 NNP denotes Materials
T27279 1782-1784 IN denotes in
T27278 1772-1781 VB denotes described
T27277 1769-1771 IN denotes as
T27276 1757-1768 VB denotes constructed
T27275 1752-1756 VB denotes were
T27274 1748-1751 NN denotes GFP
T27273 1738-1747 VB denotes targeting
T27272 1732-1737 NN denotes shRNA
T27271 1724-1731 NN denotes control
T27270 1721-1723 CC denotes or
T27269 1715-1720 NN denotes MyD88
T27268 1705-1714 VB denotes targeting
T27267 1699-1704 NN denotes shRNA
T27266 1676-1698 JJ denotes lentivirally-delivered
T27265 1668-1675 VB denotes express
T27264 1653-1667 RB denotes constitutively
T27263 1648-1652 WDT denotes that
T27262 1642-1647 NN denotes cells
T27261 1636-1641 NN denotes THP-1
T27260 1616-1625 NN denotes in human
T27259 1610-1615 JJ denotes ssion
T27258 1608-1610 IN denotes re
T27257 1598-1608 NN denotes 5 gene exp
T27256 1594-1598 NN denotes NFAT
T27255 1588-1593 NN denotes on of
T27254 1586-1588 IN denotes ti
T27253 1577-1586 NN denotes MTb induc
T27252 1573-1576 NN denotes for
T27251 1569-1572 IN denotes ant
T27250 1560-1569 JJ denotes is import
T27249 1557-1559 VB denotes 88
T27248 1552-1557 NN denotes ) MyD
T27247 1551-1552 -RRB- denotes B
T27246 1550-1551 NN denotes (
T27245 1548-1549 -LRB- denotes .
T27244 1547-1548 -RRB- denotes )
T27243 1543-1547 CD denotes 0.01
T27242 1542-1543 SYM denotes <
T27241 1541-1542 NN denotes p
T27240 1539-1540 -COMMA- denotes ,
T27239 1537-1539 SYM denotes **
T27238 1536-1537 -LRB- denotes (
T27237 1532-1535 NN denotes MTb
T27236 1527-1531 IN denotes with
T27235 1518-1526 VB denotes infected
T27234 1515-1517 CC denotes or
T27233 1513-1514 -RRB- denotes )
T27232 1509-1513 CD denotes 0.05
T27231 1508-1509 SYM denotes <
T27230 1507-1508 NN denotes p
T27229 1505-1506 -COMMA- denotes ,
T27228 1504-1505 SYM denotes *
T27227 1503-1504 -LRB- denotes (
T27226 1495-1502 NN denotes Pam3Cys
T27225 1490-1494 IN denotes with
T27224 1480-1489 VB denotes incubated
T27223 1475-1479 VB denotes were
T27222 1469-1474 NN denotes cells
T27221 1465-1468 DT denotes the
T27220 1460-1464 WRB denotes when
T27219 1450-1459 VB denotes increased
T27218 1436-1449 RB denotes significantly
T27217 1432-1435 VB denotes was
T27216 1421-1431 NN denotes expression
T15602 5185-5188 CC denotes and
T15601 5179-5184 NN denotes IRAK1
T15600 5169-5178 NN denotes molecules
T15599 5161-5168 NN denotes adaptor
T15598 5144-5160 JJ denotes MyD88-associated
T15597 5140-5143 DT denotes the
T15596 5136-5139 CC denotes and
T15595 5130-5135 NN denotes MyD88
T15594 5127-5129 IN denotes of
T15593 5116-5126 NN denotes activation
T15592 5107-5115 VB denotes requires
T15591 5101-5106 NN denotes cells
T15590 5091-5100 JJ denotes monocytic
T15589 5085-5090 JJ denotes human
T15588 5082-5084 IN denotes in
T15587 5071-5081 NN denotes expression
T15586 5066-5070 NN denotes gene
T15585 5060-5065 NN denotes NFAT5
T15584 5057-5059 IN denotes of
T15583 5044-5056 NN denotes upregulation
T15582 5040-5043 NN denotes MTb
T15581 5035-5039 IN denotes that
T15580 5023-5034 VB denotes demonstrate
T15579 5015-5022 RB denotes clearly
T15578 5007-5014 NN denotes results
T15577 5001-5006 DT denotes these
T15576 4999-5000 -COMMA- denotes ,
T15575 4991-4999 RB denotes together
T15574 4985-4990 VB denotes Taken
T15573 4982-4983 -RRB- denotes )
T15572 4977-4982 NN denotes 7C–7D
T15571 4969-4976 NN denotes Figures
T15570 4968-4969 -LRB- denotes (
T15569 4958-4967 NN denotes monocytes
T15568 4945-4957 JJ denotes MTb-infected
T15567 4942-4944 IN denotes in
T15566 4924-4941 JJ denotes MyD88-independent
T15565 4920-4923 CC denotes but
T15564 4918-4919 -COMMA- denotes ,
T15563 4903-4918 JJ denotes TRAF6-dependent
T15562 4899-4902 CC denotes and
T15561 4892-4898 NN denotes IRAK1-
T15560 4889-4891 VB denotes is
T15559 4878-4888 NN denotes expression
T15558 4873-4877 NN denotes CD86
T15557 4868-4872 IN denotes that
T15556 4857-4867 VB denotes indicating
T15555 4855-4856 -COMMA- denotes ,
T15554 4849-4855 NN denotes levels
T15553 4844-4848 NN denotes mRNA
T15552 4839-4843 NN denotes CD86
T15551 4831-4838 VB denotes reduced
T15550 4817-4830 RB denotes significantly
T15549 4806-4816 NN denotes expression
T15548 4801-4805 NN denotes gene
T15547 4795-4800 NN denotes TRAF6
T15546 4791-4794 CC denotes and
T15545 4785-4790 NN denotes IRAK1
T15544 4782-4784 IN denotes of
T15543 4771-4781 NN denotes abrogation
T15542 4769-4770 -COMMA- denotes ,
T15541 4768-4769 -RRB- denotes )
T15540 4766-4768 NN denotes 7B
T15539 4759-4765 NN denotes Figure
T15538 4758-4759 -LRB- denotes (
T15537 4752-4757 NN denotes MyD88
T15536 4749-4751 IN denotes on
T15535 4742-4748 VB denotes depend
T15534 4738-4741 RB denotes not
T15533 4734-4737 VB denotes did
T15532 4723-4733 NN denotes expression
T15531 4718-4722 NN denotes gene
T15530 4713-4717 NN denotes CD86
T15529 4704-4712 IN denotes Although
T15528 4694-4702 VB denotes reported
T15527 4683-4693 RB denotes previously
T15526 4680-4682 IN denotes as
T15525 4670-4679 NN denotes infection
T15524 4666-4669 NN denotes MTb
T15523 4663-4665 TO denotes to
T15522 4653-4662 JJ denotes secondary
T15521 4642-4652 NN denotes expression
T15520 4637-4641 NN denotes gene
T15519 4633-4636 NN denotes TNF
T15518 4630-4632 IN denotes in
T15517 4624-4629 NN denotes TRAF6
T15516 4620-4623 CC denotes and
T15515 4614-4619 NN denotes IRAK1
T15514 4610-4613 IN denotes for
T15513 4605-4609 NN denotes role
T15512 4603-4604 DT denotes a
T15511 4598-4602 IN denotes with
T15510 4587-4597 JJ denotes consistent
T15509 4585-4586 -COMMA- denotes ,
T15508 4584-4585 -RRB- denotes )
T15507 4579-4584 NN denotes 7C–7D
T15506 4571-4578 NN denotes Figures
T15505 4570-4571 -LRB- denotes (
T15504 4562-4569 VB denotes reduced
T15503 4548-4561 RB denotes significantly
T15502 4543-4547 RB denotes also
T15501 4539-4542 VB denotes was
T15493 4486-4492 NN denotes levels
T15492 4481-4485 NN denotes mRNA
T15491 4475-4480 NN denotes NFAT5
T15490 4467-4474 VB denotes induced
T15489 4463-4466 NN denotes MTb
T15488 4453-4462 VB denotes inhibited
T15487 4439-4452 RB denotes significantly
T15486 4433-4438 NN denotes TRAF6
T15485 4429-4432 CC denotes and
T15484 4423-4428 NN denotes IRAK1
T15483 4418-4422 CC denotes both
T15482 4415-4417 IN denotes of
T15481 4405-4414 NN denotes knockdown
T15480 4403-4404 -COMMA- denotes ,
T15479 4401-4403 NN denotes 7D
T15478 4397-4400 CC denotes and
T15477 4394-4396 NN denotes 7C
T15476 4386-4393 NN denotes Figures
T15475 4383-4385 IN denotes in
T15474 4377-4382 VB denotes shown
T15473 4374-4376 IN denotes As
T15472 4367-4372 NN denotes MyD88
T15471 4364-4366 IN denotes of
T15470 4353-4363 RB denotes downstream
T15469 4343-4352 NN denotes molecules
T15468 4333-4342 VB denotes signaling
T15467 4329-4332 CD denotes two
T15466 4327-4328 -COMMA- denotes ,
T15465 4322-4327 NN denotes TRAF6
T15464 4319-4321 CC denotes or
T15463 4313-4318 NN denotes IRAK1
T15462 4303-4312 VB denotes targeting
T15461 4296-4302 NN denotes shRNAs
T15460 4273-4295 JJ denotes lentivirally-delivered
T15459 4268-4272 IN denotes with
T15458 4257-4267 VB denotes transduced
T15457 4251-4256 NN denotes cells
T15456 4245-4250 NN denotes THP-1
T15455 4233-4244 VB denotes constructed
T15454 4228-4232 RB denotes also
T15453 4225-4227 PRP denotes we
T15452 4223-4224 -COMMA- denotes ,
T15451 4210-4223 NN denotes transcription
T15450 4204-4209 NN denotes NFAT5
T15449 4201-4203 IN denotes of
T15448 4188-4200 NN denotes upregulation
T15447 4184-4187 NN denotes MTb
T15446 4174-4183 VB denotes mediating
T15445 4166-4173 NN denotes pathway
T15444 4162-4165 DT denotes the
T15443 4154-4161 VB denotes dissect
T15442 4147-4153 VB denotes futher
T15441 4144-4146 TO denotes To
T15440 4137-4142 NN denotes MyD88
T15439 4132-4136 IN denotes upon
T15438 4122-4131 JJ denotes dependent
T15437 4119-4121 VB denotes is
T15436 4113-4118 NN denotes NFAT5
T15435 4110-4112 IN denotes of
T15434 4099-4109 NN denotes regulation
T15433 4095-4098 NN denotes MTb
T15432 4093-4094 -COMMA- denotes ,
T15431 4089-4093 RB denotes Thus
T15430 4081-4087 NN denotes levels
T15429 4076-4080 NN denotes mRNA
T15428 4071-4075 NN denotes CD86
T15427 4068-4070 IN denotes on
T15426 4061-4067 NN denotes impact
T15425 4058-4060 DT denotes no
T15424 4054-4057 VB denotes had
T15423 4050-4053 CC denotes and
T15422 4043-4049 NN denotes levels
T15421 4038-4042 NN denotes mRNA
T15420 4034-4037 NN denotes TNF
T15419 4030-4033 CC denotes and
T15418 4024-4029 NN denotes NFAT5
T15417 4012-4023 JJ denotes MTb-induced
T15416 4002-4011 VB denotes inhibited
T15415 3989-4001 RB denotes specifically
T15414 3983-3988 NN denotes MyD88
T15413 3980-3982 IN denotes of
T15412 3970-3979 NN denotes knockdown
T15411 3968-3969 -COMMA- denotes ,
T15410 3966-3968 NNP denotes 7B
T15409 3959-3965 NNP denotes Figure
T15408 3956-3958 IN denotes in
T15407 3950-3955 VB denotes shown
T15406 3947-3949 IN denotes As
T15405 3944-3945 -RRB- denotes ]
T15404 3942-3944 CD denotes 56
T15403 3941-3942 -LRB- denotes [
T15402 3939-3940 -COMMA- denotes ,
T15401 3938-3939 -RRB- denotes ]
T15400 3936-3938 CD denotes 55
T15399 3935-3936 -LRB- denotes [
T15398 3930-3934 NN denotes CD86
T15397 3925-3929 NN denotes gene
T15396 3907-3924 JJ denotes MyD88-independent
T15395 3903-3906 DT denotes the
T15394 3900-3902 IN denotes of
T15393 3893-3899 NN denotes levels
T15392 3888-3892 NN denotes mRNA
T15391 3879-3887 VB denotes measured
T15390 3876-3878 PRP denotes we
T15389 3874-3875 -COMMA- denotes ,
T15388 3867-3874 NN denotes control
T15387 3858-3866 JJ denotes negative
T15386 3856-3857 DT denotes a
T15385 3852-3855 IN denotes For
T15384 3844-3850 NN denotes levels
T15383 3839-3843 NN denotes mRNA
T15382 3835-3838 NN denotes TNF
T15381 3826-3834 VB denotes measured
T15380 3823-3825 PRP denotes we
T15379 3815-3822 NN denotes control
T15378 3806-3814 JJ denotes positive
T15377 3804-3805 DT denotes a
T15376 3801-3803 IN denotes as
T15375 3799-3800 -COMMA- denotes ,
T15374 3798-3799 -RRB- denotes ]
T15373 3796-3798 CD denotes 55
T15372 3795-3796 -LRB- denotes [
T15371 3793-3794 -COMMA- denotes ,
T15370 3792-3793 -RRB- denotes ]
T15369 3790-3792 CD denotes 54
T15368 3789-3790 -LRB- denotes [
T15367 3787-3788 -COMMA- denotes ,
T15366 3786-3787 -RRB- denotes ]
T15365 3784-3786 CD denotes 21
T15364 3783-3784 -LRB- denotes [
T15363 3778-3782 NN denotes gene
T15362 3762-3777 JJ denotes MyD88-dependent
T15361 3760-3761 DT denotes a
T15360 3757-3759 VB denotes is
T15359 3753-3756 NN denotes TNF
T15358 3747-3752 IN denotes Since
T15357 3737-3745 VB denotes examined
T15356 3732-3736 VB denotes were
T15355 3725-3731 NN denotes levels
T15354 3720-3724 NN denotes mRNA
T15353 3714-3719 NN denotes NFAT5
T15352 3710-3713 CC denotes and
T15351 3708-3709 -RRB- denotes )
T15350 3701-3708 NN denotes CDC1551
T15349 3700-3701 -LRB- denotes (
T15348 3696-3699 NN denotes MTb
T15347 3691-3695 IN denotes with
T15346 3682-3690 VB denotes infected
T15345 3677-3681 RB denotes then
T15344 3672-3676 VB denotes were
T15343 3666-3671 NN denotes cells
T15342 3660-3665 NN denotes THP-1
T15341 3650-3659 JJ denotes knockdown
T15340 3644-3649 NN denotes MyD88
T15339 3638-3643 DT denotes These
T15338 3635-3636 -RRB- denotes )
T15337 3630-3635 VB denotes shown
T15336 3626-3629 RB denotes not
T15335 3621-3625 NN denotes data
T15334 3620-3621 -LRB- denotes (
T15333 3614-3619 NN denotes shRNA
T15332 3610-3613 NN denotes GFP
T15331 3602-3609 NN denotes control
T15330 3591-3601 VB denotes expressing
T15329 3580-3590 NN denotes lentivirus
T15328 3578-3579 DT denotes a
T15327 3573-3577 IN denotes with
T15326 3562-3572 VB denotes transduced
T15325 3556-3561 NN denotes cells
T15324 3550-3555 NN denotes THP-1
T15323 3542-3549 VB denotes control
T15322 3539-3541 TO denotes to
T15321 3528-3538 NN denotes comparison
T15320 3525-3527 IN denotes in
T15319 3517-3524 VB denotes reduced
T15318 3503-3516 RB denotes significantly
T15317 3499-3502 CC denotes and
T15316 3484-3498 RB denotes constitutively
T15315 3479-3483 VB denotes were
T15314 3473-3478 NN denotes cells
T15313 3467-3472 DT denotes these
T15312 3464-3466 IN denotes in
T15311 3457-3463 NN denotes levels
T15310 3452-3456 NN denotes mRNA
T15309 3446-3451 NN denotes MyD88
T15308 3441-3445 IN denotes that
T15307 3428-3440 VB denotes demonstrated
T15306 3419-3427 NN denotes analysis
T15305 3415-3418 NN denotes PCR
T15304 3405-3414 JJ denotes Real-time
T15303 3398-3403 NN denotes MyD88
T15302 3388-3397 VB denotes targeting
T15301 3384-3387 NN denotes RNA
T15300 3383-3384 -RRB- denotes )
T15299 3381-3383 NN denotes sh
T15298 3380-3381 -LRB- denotes (
T15297 3372-3379 NN denotes hairpin
T15296 3366-3371 JJ denotes short
T15295 3343-3365 JJ denotes lentivirally-delivered
T15294 3341-3342 DT denotes a
T15293 3331-3340 VB denotes expresses
T15292 3316-3330 RB denotes constitutively
T15291 3311-3315 WDT denotes that
T15290 3306-3310 NN denotes line
T15289 3301-3305 NN denotes cell
T15288 3295-3300 NN denotes THP-1
T15287 3293-3294 DT denotes a
T15286 3281-3292 VB denotes constructed
T15285 3278-3280 PRP denotes we
T15284 3276-3277 -COMMA- denotes ,
T15283 3266-3276 NN denotes expression
T15282 3261-3265 NN denotes gene
T15281 3255-3260 NN denotes NFAT5
T15280 3252-3254 IN denotes of
T15279 3242-3251 NN denotes induction
T15278 3238-3241 NN denotes MTb
T15267 3173-3176 CC denotes and
T15266 3165-3172 NN denotes protein
T15265 3160-3164 DT denotes this
T15264 3155-3159 IN denotes that
T15263 3147-3154 VB denotes confirm
T15262 3144-3146 TO denotes To
T15261 3141-3142 -RRB- denotes )
T15260 3140-3141 -RRB- denotes ]
T15259 3138-3140 CD denotes 53
T15258 3137-3138 -LRB- denotes [
T15257 3134-3136 IN denotes in
T15256 3125-3133 VB denotes reviewed
T15255 3124-3125 -LRB- denotes (
T15254 3115-3123 NN denotes ligation
T15253 3110-3114 NN denotes TLR2
T15252 3105-3109 IN denotes upon
T15251 3097-3104 NN denotes signals
T15250 3087-3096 VB denotes transmits
T15249 3081-3086 NN denotes MyD88
T15248 3072-3080 NN denotes molecule
T15247 3064-3071 NN denotes adaptor
T15246 3060-3063 DT denotes The
T15245 976-977 -RRB- denotes )
T15244 974-976 NN denotes 7A
T15243 967-973 NN denotes Figure
T15242 966-967 -LRB- denotes (
T15241 955-965 NN denotes expression
T15240 950-954 NN denotes gene
T15239 944-949 NN denotes NFAT5
T15238 941-943 IN denotes on
T15237 934-940 NN denotes effect
T15236 922-933 JJ denotes stimulatory
T15235 918-921 PRP-DOLLAR- denotes its
T15234 907-917 VB denotes augmenting
T15233 905-906 -COMMA- denotes ,
T15232 896-905 NN denotes infection
T15231 892-895 NN denotes MTb
T15230 885-891 JJ denotes actual
T15229 878-884 IN denotes during
T15228 868-877 VB denotes triggered
T15227 865-867 VB denotes be
T15226 861-864 MD denotes may
T15225 856-860 NN denotes PRRs
T15224 845-855 JJ denotes additional
T15223 840-844 IN denotes that
T15222 829-839 VB denotes suggesting
T15221 827-828 -COMMA- denotes ,
T15220 816-827 NN denotes stimulation
T15219 808-815 NN denotes Pam3Cys
T15218 803-807 IN denotes than
T15217 796-802 NN denotes extent
T15216 788-795 JJ denotes greater
T15215 786-787 DT denotes a
T15214 783-785 TO denotes to
T15213 776-782 NN denotes levels
T15212 771-775 NN denotes mRNA
T15211 765-770 NN denotes NFAT5
T15210 756-764 VB denotes enhanced
T15209 746-755 NN denotes infection
T15208 742-745 NN denotes MTb
T15207 740-741 -COMMA- denotes ,
T15206 733-740 RB denotes Notably
T15205 730-731 -RRB- denotes )
T15204 728-730 NN denotes 7A
T15203 721-727 NN denotes Figure
T15202 720-721 -LRB- denotes (
T15201 712-719 NN denotes CDC1551
T15200 707-711 IN denotes with
T15199 701-706 NN denotes cells
T15198 695-700 NN denotes THP-1
T15197 686-694 VB denotes infected
T15196 681-685 RB denotes also
T15195 678-680 PRP denotes we
T15194 667-677 NN denotes experiment
T15193 662-666 DT denotes this
T15192 658-661 IN denotes for
T15191 650-657 NN denotes control
T15190 641-649 JJ denotes positive
T15189 639-640 DT denotes a
T15188 636-638 IN denotes As
T15187 633-634 -RRB- denotes )
T15186 631-633 NN denotes 7A
T15185 624-630 NN denotes Figure
T15184 623-624 -LRB- denotes (
T15183 617-622 NN denotes cells
T15182 609-616 NN denotes control
T15181 593-608 JJ denotes mock-stimulated
T15180 590-592 TO denotes to
T15179 581-589 VB denotes compared
T15178 578-580 IN denotes as
T15177 572-577 NN denotes cells
T15176 553-571 JJ denotes Pam3Cys-stimulated
T15175 550-552 IN denotes in
T15174 540-549 VB denotes increased
T15173 526-539 RB denotes significantly
T15172 521-525 VB denotes were
T15171 514-520 NN denotes levels
T15170 509-513 NN denotes mRNA
T15169 503-508 NN denotes NFAT5
T15168 501-502 -COMMA- denotes ,
T15167 496-501 NN denotes hours
T15166 493-495 CD denotes 16
T15165 489-492 IN denotes for
T15164 481-488 NN denotes Pam3Cys
T15163 473-480 NN denotes agonist
T15162 459-472 JJ denotes TLR2-specific
T15161 455-458 DT denotes the
T15160 450-454 IN denotes with
T15159 442-449 VB denotes treated
T15158 437-441 VB denotes were
T15157 431-436 NN denotes cells
T15156 425-430 NN denotes THP-1
T15155 420-424 WRB denotes When
T15154 412-418 NN denotes levels
T15153 407-411 NN denotes mRNA
T15152 401-406 NN denotes NFAT5
T15151 391-400 VB denotes enhancing
T15150 388-390 IN denotes in
T15149 379-387 NN denotes ligation
T15148 374-378 NN denotes TLR2
T15147 371-373 IN denotes of
T15146 359-370 NN denotes requirement
T15145 355-358 DT denotes the
T15144 345-354 VB denotes examining
T15143 342-344 IN denotes by
T15142 336-341 VB denotes began
T15141 333-335 PRP denotes We
T15140 321-331 NN denotes expression
T15139 316-320 NN denotes gene
T15138 310-315 NN denotes NFAT5
T15137 307-309 IN denotes of
T15136 295-306 NN denotes stimulation
T15135 291-294 NN denotes MTb
T15134 287-290 IN denotes for
T15133 278-286 VB denotes required
T15132 274-277 VB denotes are
T15131 269-273 WDT denotes that
T15130 261-268 NN denotes pathway
T15129 257-260 NN denotes TLR
T15128 253-256 DT denotes the
T15127 250-252 IN denotes in
T15126 240-249 NN denotes molecules
T15125 230-239 VB denotes signaling
T15124 221-229 JJ denotes specific
T15123 217-220 IN denotes for
T15122 205-216 NN denotes requirement
T15121 201-204 DT denotes the
T15120 188-200 VB denotes investigated
T15119 183-187 RB denotes next
T15118 180-182 PRP denotes we
T15117 178-179 -COMMA- denotes ,
T15116 167-178 NN denotes replication
T15115 161-166 NN denotes HIV-1
T15114 149-160 JJ denotes MTb-induced
T15113 147-148 -COMMA- denotes ,
T15112 132-147 JJ denotes NFAT5-dependent
T15111 121-131 VB denotes underlying
T15110 110-120 NN denotes mechanisms
T15109 101-109 JJ denotes cellular
T15108 97-100 DT denotes the
T15107 88-96 VB denotes decipher
T15106 85-87 TO denotes to
T15105 79-84 VB denotes begin
T15104 76-78 TO denotes To
T15103 68-75 NN denotes cascade
T15102 58-67 NN denotes signaling
T15101 42-57 JJ denotes MyD88-dependent
T15100 38-41 DT denotes the
T15099 34-37 IN denotes via
T15500 4528-4538 NN denotes expression
T15499 4523-4527 NN denotes gene
T15498 4519-4522 NN denotes TNF
T15497 4507-4518 JJ denotes MTb-induced
T15496 4505-4506 -COMMA- denotes ,
T15495 4497-4505 VB denotes expected
T15494 4494-4496 IN denotes As
T15277 3234-3237 IN denotes for
T15276 3224-3233 JJ denotes important
T15275 3221-3223 VB denotes is
T15274 3213-3220 NN denotes pathway
T15273 3199-3212 JJ denotes TLR-dependent
T15272 3194-3198 DT denotes this
T15271 3189-3193 IN denotes that
T15270 3187-3188 -COMMA- denotes ,
T15269 3178-3187 RB denotes therefore
T15268 3176-3177 -COMMA- denotes ,
R10988 T15103 T15099 arg2Of cascade,via
R10989 T15103 T15100 arg1Of cascade,the
R10990 T15103 T15101 arg1Of cascade,MyD88-dependent
R10991 T15103 T15102 arg1Of cascade,signaling
R10992 T15105 T15104 arg1Of begin,To
R10993 T15107 T15105 arg2Of decipher,begin
R10994 T15107 T15106 arg1Of decipher,to
R10995 T15110 T15107 arg2Of mechanisms,decipher
R10996 T15110 T15108 arg1Of mechanisms,the
R10997 T15110 T15109 arg1Of mechanisms,cellular
R10998 T15110 T15111 arg1Of mechanisms,underlying
R10999 T15112 T15113 arg1Of NFAT5-dependent,","
R11000 T15114 T15113 arg2Of MTb-induced,","
R11001 T15116 T15111 arg2Of replication,underlying
R11002 T15116 T15112 arg1Of replication,NFAT5-dependent
R11003 T15116 T15114 arg1Of replication,MTb-induced
R11004 T15116 T15115 arg1Of replication,HIV-1
R11005 T15118 T15105 arg1Of we,begin
R11006 T15118 T15107 arg1Of we,decipher
R11007 T15118 T15120 arg1Of we,investigated
R11008 T15120 T15104 modOf investigated,To
R11009 T15120 T15117 arg1Of investigated,","
R11010 T15120 T15119 arg1Of investigated,next
R11011 T15122 T15120 arg2Of requirement,investigated
R11012 T15122 T15121 arg1Of requirement,the
R11013 T15122 T15123 arg1Of requirement,for
R11014 T15126 T15123 arg2Of molecules,for
R11015 T15126 T15124 arg1Of molecules,specific
R11016 T15126 T15125 arg1Of molecules,signaling
R11017 T15126 T15127 arg1Of molecules,in
R11018 T15126 T15131 arg1Of molecules,that
R11019 T15126 T15132 arg1Of molecules,are
R11020 T15126 T15133 arg2Of molecules,required
R11021 T15130 T15127 arg2Of pathway,in
R11022 T15130 T15128 arg1Of pathway,the
R11023 T15130 T15129 arg1Of pathway,TLR
R11024 T15133 T15132 arg2Of required,are
R11025 T15133 T15134 arg1Of required,for
R11026 T15136 T15134 arg2Of stimulation,for
R11027 T15136 T15135 arg1Of stimulation,MTb
R11028 T15136 T15137 arg1Of stimulation,of
R11029 T15140 T15137 arg2Of expression,of
R11030 T15140 T15138 arg1Of expression,NFAT5
R11031 T15140 T15139 arg1Of expression,gene
R11032 T15141 T15142 arg1Of We,began
R11033 T15141 T15144 arg1Of We,examining
R11034 T15142 T15143 arg1Of began,by
R11035 T15144 T15143 arg2Of examining,by
R11036 T15146 T15144 arg2Of requirement,examining
R11037 T15146 T15145 arg1Of requirement,the
R11038 T15146 T15147 arg1Of requirement,of
R11039 T15146 T15150 arg1Of requirement,in
R11040 T15149 T15147 arg2Of ligation,of
R11041 T15149 T15148 arg1Of ligation,TLR2
R11042 T15151 T15150 arg2Of enhancing,in
R11043 T15154 T15151 arg2Of levels,enhancing
R11044 T15154 T15152 arg1Of levels,NFAT5
R11045 T15154 T15153 arg1Of levels,mRNA
R11046 T15157 T15156 arg1Of cells,THP-1
R11047 T15157 T15158 arg1Of cells,were
R11048 T15157 T15159 arg2Of cells,treated
R11049 T15159 T15155 arg2Of treated,When
R11050 T15159 T15158 arg2Of treated,were
R11051 T15159 T15160 arg1Of treated,with
R11052 T15164 T15160 arg2Of Pam3Cys,with
R11053 T15164 T15161 arg1Of Pam3Cys,the
R11054 T15164 T15162 arg1Of Pam3Cys,TLR2-specific
R11055 T15164 T15163 arg1Of Pam3Cys,agonist
R11056 T15164 T15165 arg1Of Pam3Cys,for
R11057 T15167 T15165 arg2Of hours,for
R11058 T15167 T15166 arg1Of hours,16
R11059 T15171 T15169 arg1Of levels,NFAT5
R11060 T15171 T15170 arg1Of levels,mRNA
R11061 T15171 T15172 arg1Of levels,were
R11062 T15171 T15174 arg2Of levels,increased
R11063 T15174 T15155 arg1Of increased,When
R11064 T15174 T15168 arg1Of increased,","
R11065 T15174 T15172 arg2Of increased,were
R11066 T15174 T15173 arg1Of increased,significantly
R11067 T15174 T15175 arg1Of increased,in
R11068 T15174 T15178 arg1Of increased,as
R11069 T15177 T15175 arg2Of cells,in
R11070 T15177 T15176 arg1Of cells,Pam3Cys-stimulated
R11071 T15179 T15178 arg2Of compared,as
R11072 T15179 T15180 arg1Of compared,to
R11073 T15183 T15180 arg2Of cells,to
R11074 T15183 T15181 arg1Of cells,mock-stimulated
R11075 T15183 T15182 arg1Of cells,control
R11076 T15183 T15184 arg1Of cells,(
R11077 T15186 T15184 arg2Of 7A,(
R11078 T15186 T15185 arg1Of 7A,Figure
R11079 T15187 T15184 arg3Of ),(
R11080 T15191 T15188 arg2Of control,As
R11081 T15191 T15189 arg1Of control,a
R11082 T15191 T15190 arg1Of control,positive
R11083 T15191 T15192 arg1Of control,for
R11084 T15194 T15192 arg2Of experiment,for
R11085 T15194 T15193 arg1Of experiment,this
R11086 T15195 T15197 arg1Of we,infected
R11087 T15197 T15188 arg1Of infected,As
R11088 T15197 T15196 arg1Of infected,also
R11089 T15197 T15200 arg1Of infected,with
R11090 T15199 T15197 arg2Of cells,infected
R11091 T15199 T15198 arg1Of cells,THP-1
R11092 T15201 T15200 arg2Of CDC1551,with
R11093 T15201 T15202 arg1Of CDC1551,(
R11094 T15204 T15202 arg2Of 7A,(
R11095 T15204 T15203 arg1Of 7A,Figure
R11096 T15205 T15202 arg3Of ),(
R11097 T15209 T15208 arg1Of infection,MTb
R11098 T15209 T15210 arg1Of infection,enhanced
R11099 T15209 T15234 arg1Of infection,augmenting
R11100 T15210 T15206 arg1Of enhanced,Notably
R11101 T15210 T15207 arg1Of enhanced,","
R11102 T15210 T15214 arg1Of enhanced,to
R11103 T15210 T15221 arg1Of enhanced,","
R11104 T15210 T15233 arg1Of enhanced,","
R11105 T15210 T15234 modOf enhanced,augmenting
R11106 T15213 T15210 arg2Of levels,enhanced
R11107 T15213 T15211 arg1Of levels,NFAT5
R11108 T15213 T15212 arg1Of levels,mRNA
R11109 T15217 T15214 arg2Of extent,to
R11110 T15217 T15215 arg1Of extent,a
R11111 T15217 T15216 arg1Of extent,greater
R11112 T15217 T15218 arg1Of extent,than
R11113 T15220 T15218 arg2Of stimulation,than
R11114 T15220 T15219 arg1Of stimulation,Pam3Cys
R11115 T15222 T15210 arg3Of suggesting,enhanced
R11116 T15225 T15224 arg1Of PRRs,additional
R11117 T15225 T15226 arg1Of PRRs,may
R11118 T15225 T15227 arg1Of PRRs,be
R11119 T15225 T15228 arg2Of PRRs,triggered
R11120 T15228 T15222 arg2Of triggered,suggesting
R11121 T15228 T15223 arg1Of triggered,that
R11122 T15228 T15226 arg2Of triggered,may
R11123 T15228 T15227 arg2Of triggered,be
R11124 T15228 T15229 arg1Of triggered,during
R11125 T15232 T15229 arg2Of infection,during
R11126 T15232 T15230 arg1Of infection,actual
R11127 T15232 T15231 arg1Of infection,MTb
R11128 T15237 T15234 arg2Of effect,augmenting
R11129 T15237 T15235 arg1Of effect,its
R11130 T15237 T15236 arg1Of effect,stimulatory
R11131 T15237 T15238 arg1Of effect,on
R11132 T15241 T15238 arg2Of expression,on
R11133 T15241 T15239 arg1Of expression,NFAT5
R11134 T15241 T15240 arg1Of expression,gene
R11135 T15241 T15242 arg1Of expression,(
R11136 T15244 T15242 arg2Of 7A,(
R11137 T15244 T15243 arg1Of 7A,Figure
R11138 T15245 T15242 arg3Of ),(
R11139 T15249 T15246 arg1Of MyD88,The
R11140 T15249 T15247 arg1Of MyD88,adaptor
R11141 T15249 T15248 arg1Of MyD88,molecule
R11142 T15249 T15250 arg1Of MyD88,transmits
R11143 T15250 T15252 arg1Of transmits,upon
R11144 T15251 T15250 arg2Of signals,transmits
R11145 T15254 T15252 arg2Of ligation,upon
R11146 T15254 T15253 arg1Of ligation,TLR2
R11147 T15254 T15255 arg1Of ligation,(
R11148 T15256 T15255 arg2Of reviewed,(
R11149 T15256 T15257 arg1Of reviewed,in
R11150 T15256 T15258 arg1Of reviewed,[
R11151 T15259 T15258 arg2Of 53,[
R11152 T15260 T15258 arg3Of ],[
R11153 T15261 T15255 arg3Of ),(
R11154 T15263 T15262 arg1Of confirm,To
R11155 T15266 T15265 arg1Of protein,this
R11156 T15266 T15267 arg1Of protein,and
R11157 T15266 T15268 arg1Of protein,","
R11158 T15268 T15275 arg1Of ",",is
R11159 T15268 T15276 arg1Of ",",important
R11160 T15269 T15270 arg1Of therefore,","
R11161 T15270 T15268 arg2Of ",",","
R11162 T15271 T15270 arg2Of that,","
R11163 T15274 T15271 arg2Of pathway,that
R11164 T15274 T15272 arg1Of pathway,this
R11165 T15274 T15273 arg1Of pathway,TLR-dependent
R11166 T15275 T15263 arg2Of is,confirm
R11167 T15275 T15264 arg1Of is,that
R11168 T15276 T15275 arg2Of important,is
R11169 T15276 T15277 arg1Of important,for
R11170 T15279 T15277 arg2Of induction,for
R11171 T15279 T15278 arg1Of induction,MTb
R11172 T15279 T15280 arg1Of induction,of
R11173 T15283 T15280 arg2Of expression,of
R11174 T15283 T15281 arg1Of expression,NFAT5
R11175 T15283 T15282 arg1Of expression,gene
R11176 T15285 T15263 arg1Of we,confirm
R11177 T15285 T15286 arg1Of we,constructed
R11178 T15286 T15262 modOf constructed,To
R11179 T15286 T15284 arg1Of constructed,","
R11180 T15290 T15286 arg2Of line,constructed
R11181 T15290 T15287 arg1Of line,a
R11182 T15290 T15288 arg1Of line,THP-1
R11183 T15290 T15289 arg1Of line,cell
R11184 T15290 T15291 arg1Of line,that
R11185 T15290 T15293 arg1Of line,expresses
R11186 T15293 T15292 arg1Of expresses,constitutively
R11187 T15299 T15298 arg2Of sh,(
R11188 T15300 T15298 arg3Of ),(
R11189 T15301 T15293 arg2Of RNA,expresses
R11190 T15301 T15294 arg1Of RNA,a
R11191 T15301 T15295 arg1Of RNA,lentivirally-delivered
R11192 T15301 T15296 arg1Of RNA,short
R11193 T15301 T15297 arg1Of RNA,hairpin
R11194 T15301 T15298 arg1Of RNA,(
R11195 T15301 T15302 arg1Of RNA,targeting
R11196 T15303 T15302 arg2Of MyD88,targeting
R11197 T15306 T15304 arg1Of analysis,Real-time
R11198 T15306 T15305 arg1Of analysis,PCR
R11199 T15306 T15307 arg1Of analysis,demonstrated
R11200 T15311 T15309 arg1Of levels,MyD88
R11201 T15311 T15310 arg1Of levels,mRNA
R11202 T15311 T15312 arg1Of levels,in
R11203 T15311 T15315 arg1Of levels,were
R11204 T15311 T15319 arg2Of levels,reduced
R11205 T15314 T15312 arg2Of cells,in
R11206 T15314 T15313 arg1Of cells,these
R11207 T15316 T15317 arg1Of constitutively,and
R11208 T15318 T15317 arg2Of significantly,and
R11209 T15319 T15307 arg2Of reduced,demonstrated
R11210 T15319 T15308 arg1Of reduced,that
R11211 T15319 T15315 arg2Of reduced,were
R11212 T15319 T15316 arg1Of reduced,constitutively
R11213 T15319 T15318 arg1Of reduced,significantly
R11214 T15319 T15320 arg1Of reduced,in
R11215 T15319 T15322 modOf reduced,to
R11216 T15321 T15320 arg2Of comparison,in
R11217 T15323 T15322 arg1Of control,to
R11218 T15325 T15323 arg2Of cells,control
R11219 T15325 T15324 arg1Of cells,THP-1
R11220 T15325 T15326 arg2Of cells,transduced
R11221 T15326 T15327 arg1Of transduced,with
R11222 T15329 T15327 arg2Of lentivirus,with
R11223 T15329 T15328 arg1Of lentivirus,a
R11224 T15329 T15330 arg1Of lentivirus,expressing
R11225 T15333 T15330 arg2Of shRNA,expressing
R11226 T15333 T15331 arg1Of shRNA,control
R11227 T15333 T15332 arg1Of shRNA,GFP
R11228 T15333 T15334 arg1Of shRNA,(
R11229 T15335 T15334 arg2Of data,(
R11230 T15335 T15337 arg2Of data,shown
R11231 T15337 T15336 arg1Of shown,not
R11232 T15338 T15334 arg3Of ),(
R11233 T15343 T15339 arg1Of cells,These
R11234 T15343 T15340 arg1Of cells,MyD88
R11235 T15343 T15341 arg1Of cells,knockdown
R11236 T15343 T15342 arg1Of cells,THP-1
R11237 T15343 T15344 arg1Of cells,were
R11238 T15343 T15346 arg2Of cells,infected
R11239 T15346 T15344 arg2Of infected,were
R11240 T15346 T15345 arg1Of infected,then
R11241 T15346 T15347 arg1Of infected,with
R11242 T15346 T15352 arg1Of infected,and
R11243 T15348 T15347 arg2Of MTb,with
R11244 T15348 T15349 arg1Of MTb,(
R11245 T15350 T15349 arg2Of CDC1551,(
R11246 T15351 T15349 arg3Of ),(
R11247 T15355 T15353 arg1Of levels,NFAT5
R11248 T15355 T15354 arg1Of levels,mRNA
R11249 T15355 T15356 arg1Of levels,were
R11250 T15355 T15357 arg2Of levels,examined
R11251 T15357 T15352 arg2Of examined,and
R11252 T15357 T15356 arg2Of examined,were
R11253 T15359 T15360 arg1Of TNF,is
R11254 T15360 T15358 arg2Of is,Since
R11255 T15360 T15367 arg1Of is,","
R11256 T15360 T15368 arg1Of is,[
R11257 T15360 T15371 arg1Of is,","
R11258 T15360 T15372 arg1Of is,[
R11259 T15360 T15375 arg1Of is,","
R11260 T15363 T15360 arg2Of gene,is
R11261 T15363 T15361 arg1Of gene,a
R11262 T15363 T15362 arg1Of gene,MyD88-dependent
R11263 T15363 T15364 arg1Of gene,[
R11264 T15365 T15364 arg2Of 21,[
R11265 T15366 T15364 arg3Of ],[
R11266 T15369 T15368 arg2Of 54,[
R11267 T15370 T15368 arg3Of ],[
R11268 T15373 T15372 arg2Of 55,[
R11269 T15374 T15372 arg3Of ],[
R11270 T15379 T15376 arg2Of control,as
R11271 T15379 T15377 arg1Of control,a
R11272 T15379 T15378 arg1Of control,positive
R11273 T15380 T15381 arg1Of we,measured
R11274 T15381 T15358 arg1Of measured,Since
R11275 T15381 T15376 arg1Of measured,as
R11276 T15384 T15381 arg2Of levels,measured
R11277 T15384 T15382 arg1Of levels,TNF
R11278 T15384 T15383 arg1Of levels,mRNA
R11279 T15388 T15385 arg2Of control,For
R11280 T15388 T15386 arg1Of control,a
R11281 T15388 T15387 arg1Of control,negative
R11282 T15390 T15391 arg1Of we,measured
R11283 T15391 T15385 arg1Of measured,For
R11284 T15391 T15389 arg1Of measured,","
R11285 T15391 T15402 arg1Of measured,","
R11286 T15391 T15403 arg1Of measured,[
R11287 T15393 T15391 arg2Of levels,measured
R11288 T15393 T15392 arg1Of levels,mRNA
R11289 T15393 T15394 arg1Of levels,of
R11290 T15398 T15394 arg2Of CD86,of
R11291 T15398 T15395 arg1Of CD86,the
R11292 T15398 T15396 arg1Of CD86,MyD88-independent
R11293 T15398 T15397 arg1Of CD86,gene
R11294 T15398 T15399 arg1Of CD86,[
R11295 T15400 T15399 arg2Of 55,[
R11296 T15401 T15399 arg3Of ],[
R11297 T15404 T15403 arg2Of 56,[
R11298 T15405 T15403 arg3Of ],[
R11299 T15407 T15406 arg2Of shown,As
R11300 T15407 T15408 arg1Of shown,in
R11301 T15410 T15408 arg2Of 7B,in
R11302 T15410 T15409 arg1Of 7B,Figure
R11303 T15412 T15413 arg1Of knockdown,of
R11304 T15412 T15416 arg1Of knockdown,inhibited
R11305 T15412 T15424 arg1Of knockdown,had
R11306 T15414 T15413 arg2Of MyD88,of
R11307 T15416 T15423 arg1Of inhibited,and
R11308 T15418 T15419 arg1Of NFAT5,and
R11309 T15420 T15419 arg2Of TNF,and
R11310 T15422 T15416 arg2Of levels,inhibited
R11311 T15422 T15417 arg1Of levels,MTb-induced
R11312 T15422 T15418 arg1Of levels,NFAT5
R11313 T15422 T15420 arg1Of levels,TNF
R11314 T15422 T15421 arg1Of levels,mRNA
R11315 T15423 T15406 arg1Of and,As
R11316 T15423 T15411 arg1Of and,","
R11317 T15423 T15415 arg1Of and,specifically
R11318 T15424 T15423 arg2Of had,and
R11319 T15426 T15424 arg2Of impact,had
R11320 T15426 T15425 arg1Of impact,no
R11321 T15426 T15427 arg1Of impact,on
R11322 T15430 T15427 arg2Of levels,on
R11323 T15430 T15428 arg1Of levels,CD86
R11324 T15430 T15429 arg1Of levels,mRNA
R11325 T15434 T15433 arg1Of regulation,MTb
R11326 T15434 T15435 arg1Of regulation,of
R11327 T15434 T15437 arg1Of regulation,is
R11328 T15434 T15438 arg1Of regulation,dependent
R11329 T15436 T15435 arg2Of NFAT5,of
R11330 T15437 T15431 arg1Of is,Thus
R11331 T15437 T15432 arg1Of is,","
R11332 T15438 T15437 arg2Of dependent,is
R11333 T15438 T15439 arg1Of dependent,upon
R11334 T15440 T15439 arg2Of MyD88,upon
R11335 T15442 T15441 arg1Of futher,To
R11336 T15443 T15442 arg2Of dissect,futher
R11337 T15445 T15443 arg2Of pathway,dissect
R11338 T15445 T15444 arg1Of pathway,the
R11339 T15446 T15443 arg3Of mediating,dissect
R11340 T15448 T15446 arg2Of upregulation,mediating
R11341 T15448 T15447 arg1Of upregulation,MTb
R11342 T15448 T15449 arg1Of upregulation,of
R11343 T15451 T15449 arg2Of transcription,of
R11344 T15451 T15450 arg1Of transcription,NFAT5
R11345 T15453 T15442 arg1Of we,futher
R11346 T15453 T15443 arg1Of we,dissect
R11347 T15453 T15446 arg1Of we,mediating
R11348 T15453 T15455 arg1Of we,constructed
R11349 T15455 T15441 modOf constructed,To
R11350 T15455 T15452 arg1Of constructed,","
R11351 T15455 T15454 arg1Of constructed,also
R11352 T15457 T15455 arg2Of cells,constructed
R11353 T15457 T15456 arg1Of cells,THP-1
R11354 T15457 T15458 arg2Of cells,transduced
R11355 T15458 T15459 arg1Of transduced,with
R11356 T15461 T15459 arg2Of shRNAs,with
R11357 T15461 T15460 arg1Of shRNAs,lentivirally-delivered
R11358 T15461 T15462 arg1Of shRNAs,targeting
R11359 T15463 T15464 arg1Of IRAK1,or
R11360 T15464 T15462 arg2Of or,targeting
R11361 T15464 T15466 arg1Of or,","
R11362 T15465 T15464 arg2Of TRAF6,or
R11363 T15469 T15466 arg2Of molecules,","
R11364 T15469 T15467 arg1Of molecules,two
R11365 T15469 T15468 arg1Of molecules,signaling
R11366 T15469 T15470 arg1Of molecules,downstream
R11367 T15470 T15471 arg1Of downstream,of
R11368 T15472 T15471 arg2Of MyD88,of
R11369 T15474 T15473 arg2Of shown,As
R11370 T15474 T15475 arg1Of shown,in
R11371 T15477 T15478 arg1Of 7C,and
R11372 T15478 T15475 arg2Of and,in
R11373 T15478 T15476 arg1Of and,Figures
R11374 T15479 T15478 arg2Of 7D,and
R11375 T15481 T15482 arg1Of knockdown,of
R11376 T15481 T15488 arg1Of knockdown,inhibited
R11377 T15484 T15485 arg1Of IRAK1,and
R11378 T15485 T15482 arg2Of and,of
R11379 T15485 T15483 arg1Of and,both
R11380 T15486 T15485 arg2Of TRAF6,and
R11381 T15488 T15473 arg1Of inhibited,As
R11382 T15488 T15480 arg1Of inhibited,","
R11383 T15488 T15487 arg1Of inhibited,significantly
R11384 T15489 T15488 arg2Of MTb,inhibited
R11385 T15493 T15488 arg3Of levels,inhibited
R11386 T15493 T15490 arg2Of levels,induced
R11387 T15493 T15491 arg1Of levels,NFAT5
R11388 T15493 T15492 arg1Of levels,mRNA
R11389 T15495 T15494 arg2Of expected,As
R11390 T15500 T15497 arg1Of expression,MTb-induced
R11391 T15500 T15498 arg1Of expression,TNF
R11392 T15500 T15499 arg1Of expression,gene
R11393 T15500 T15501 arg1Of expression,was
R11394 T15500 T15504 arg2Of expression,reduced
R11395 T15504 T15494 arg1Of reduced,As
R11396 T15504 T15496 arg1Of reduced,","
R11397 T15504 T15501 arg2Of reduced,was
R11398 T15504 T15502 arg1Of reduced,also
R11399 T15504 T15503 arg1Of reduced,significantly
R11400 T15504 T15505 arg1Of reduced,(
R11401 T15504 T15509 arg1Of reduced,","
R11402 T15504 T15510 arg1Of reduced,consistent
R11403 T15507 T15505 arg2Of 7C–7D,(
R11404 T15507 T15506 arg1Of 7C–7D,Figures
R11405 T15508 T15505 arg3Of ),(
R11406 T15510 T15511 arg1Of consistent,with
R11407 T15513 T15511 arg2Of role,with
R11408 T15513 T15512 arg1Of role,a
R11409 T15513 T15514 arg1Of role,for
R11410 T15513 T15518 arg1Of role,in
R11411 T15515 T15516 arg1Of IRAK1,and
R11412 T15516 T15514 arg2Of and,for
R11413 T15517 T15516 arg2Of TRAF6,and
R11414 T15521 T15518 arg2Of expression,in
R11415 T15521 T15519 arg1Of expression,TNF
R11416 T15521 T15520 arg1Of expression,gene
R11417 T15521 T15522 arg1Of expression,secondary
R11418 T15522 T15523 arg1Of secondary,to
R11419 T15525 T15523 arg2Of infection,to
R11420 T15525 T15524 arg1Of infection,MTb
R11421 T15525 T15526 arg1Of infection,as
R11422 T15528 T15526 arg2Of reported,as
R11423 T15528 T15527 arg1Of reported,previously
R11424 T15532 T15530 arg1Of expression,CD86
R11425 T15532 T15531 arg1Of expression,gene
R11426 T15532 T15533 arg1Of expression,did
R11427 T15532 T15535 arg1Of expression,depend
R11428 T15535 T15529 arg2Of depend,Although
R11429 T15535 T15533 arg2Of depend,did
R11430 T15535 T15534 arg1Of depend,not
R11431 T15535 T15536 arg1Of depend,on
R11432 T15537 T15536 arg2Of MyD88,on
R11433 T15537 T15538 arg1Of MyD88,(
R11434 T15540 T15538 arg2Of 7B,(
R11435 T15540 T15539 arg1Of 7B,Figure
R11436 T15541 T15538 arg3Of ),(
R11437 T15543 T15544 arg1Of abrogation,of
R11438 T15543 T15546 arg1Of abrogation,and
R11439 T15545 T15544 arg2Of IRAK1,of
R11440 T15546 T15551 arg1Of and,reduced
R11441 T15549 T15546 arg2Of expression,and
R11442 T15549 T15547 arg1Of expression,TRAF6
R11443 T15549 T15548 arg1Of expression,gene
R11444 T15551 T15529 arg1Of reduced,Although
R11445 T15551 T15542 arg1Of reduced,","
R11446 T15551 T15550 arg1Of reduced,significantly
R11447 T15551 T15555 arg1Of reduced,","
R11448 T15551 T15556 modOf reduced,indicating
R11449 T15554 T15551 arg2Of levels,reduced
R11450 T15554 T15552 arg1Of levels,CD86
R11451 T15554 T15553 arg1Of levels,mRNA
R11452 T15559 T15558 arg1Of expression,CD86
R11453 T15559 T15560 arg1Of expression,is
R11454 T15559 T15561 arg1Of expression,IRAK1-
R11455 T15559 T15563 arg1Of expression,TRAF6-dependent
R11456 T15559 T15566 arg1Of expression,MyD88-independent
R11457 T15560 T15556 arg2Of is,indicating
R11458 T15560 T15557 arg1Of is,that
R11459 T15560 T15567 arg1Of is,in
R11460 T15561 T15562 arg1Of IRAK1-,and
R11461 T15562 T15565 arg1Of and,but
R11462 T15563 T15562 arg2Of TRAF6-dependent,and
R11463 T15565 T15560 arg2Of but,is
R11464 T15565 T15564 arg1Of but,","
R11465 T15566 T15565 arg2Of MyD88-independent,but
R11466 T15569 T15567 arg2Of monocytes,in
R11467 T15569 T15568 arg1Of monocytes,MTb-infected
R11468 T15569 T15570 arg1Of monocytes,(
R11469 T15572 T15570 arg2Of 7C–7D,(
R11470 T15572 T15571 arg1Of 7C–7D,Figures
R11471 T15573 T15570 arg3Of ),(
R11472 T15574 T15575 arg1Of Taken,together
R11473 T15578 T15577 arg1Of results,these
R11474 T15578 T15580 arg1Of results,demonstrate
R11475 T15580 T15574 modOf demonstrate,Taken
R11476 T15580 T15576 arg1Of demonstrate,","
R11477 T15580 T15579 arg1Of demonstrate,clearly
R11478 T15583 T15582 arg1Of upregulation,MTb
R11479 T15583 T15584 arg1Of upregulation,of
R11480 T15583 T15592 arg1Of upregulation,requires
R11481 T15587 T15584 arg2Of expression,of
R11482 T15587 T15585 arg1Of expression,NFAT5
R11483 T15587 T15586 arg1Of expression,gene
R11484 T15587 T15588 arg1Of expression,in
R11485 T15591 T15588 arg2Of cells,in
R11486 T15591 T15589 arg1Of cells,human
R11487 T15591 T15590 arg1Of cells,monocytic
R11488 T15592 T15580 arg2Of requires,demonstrate
R11489 T15592 T15581 arg1Of requires,that
R11490 T15593 T15594 arg1Of activation,of
R11491 T15593 T15596 arg1Of activation,and
R11492 T15595 T15594 arg2Of MyD88,of
R11493 T15596 T15592 arg2Of and,requires
R11494 T15600 T15597 arg1Of molecules,the
R11495 T15600 T15598 arg1Of molecules,MyD88-associated
R11496 T15600 T15599 arg1Of molecules,adaptor
R11497 T15601 T15602 arg1Of IRAK1,and
R11498 T15602 T15596 arg2Of and,and
R11499 T15602 T15600 arg1Of and,molecules
R11500 T15603 T15602 arg2Of TRAF6,and
R19660 T27153 T27150 arg1Of cascade,The
R19661 T27153 T27151 arg1Of cascade,MyD88-mediated
R19662 T27153 T27152 arg1Of cascade,signaling
R19663 T27153 T27154 arg1Of cascade,is
R19664 T27153 T27155 arg1Of cascade,important
R19665 T27155 T27154 arg2Of important,is
R19666 T27155 T27156 arg1Of important,for
R19667 T27158 T27156 arg2Of induction,for
R19668 T27158 T27157 arg1Of induction,MTb
R19669 T27158 T27159 arg1Of induction,of
R19670 T27158 T27162 arg1Of induction,in
R19671 T27161 T27159 arg2Of expression,of
R19672 T27161 T27160 arg1Of expression,NFAT5
R19673 T27164 T27162 arg2Of monocytes,in
R19674 T27164 T27163 arg1Of monocytes,human
R19675 T27166 T27165 arg2Of A,(
R19676 T27167 T27165 arg3Of ),(
R19677 T27168 T27165 arg1Of Engagement,(
R19678 T27168 T27169 arg1Of Engagement,of
R19679 T27168 T27172 arg1Of Engagement,enhances
R19680 T27170 T27169 arg2Of TLR2,of
R19681 T27172 T27171 arg1Of enhances,significantly
R19682 T27174 T27173 arg1Of mRNA,NFAT5
R19683 T27175 T27172 arg2Of synthesis,enhances
R19684 T27175 T27174 arg1Of synthesis,mRNA
R19685 T27175 T27176 arg1Of synthesis,in
R19686 T27177 T27176 arg2Of monocytes,in
R19687 T27179 T27178 arg1Of cells,THP-1
R19688 T27179 T27180 arg1Of cells,were
R19689 T27179 T27181 arg2Of cells,incubated
R19690 T27181 T27180 arg2Of incubated,were
R19691 T27181 T27182 arg1Of incubated,with
R19692 T27186 T27183 arg1Of Pam3Cys,the
R19693 T27186 T27184 arg1Of Pam3Cys,TLR2-specific
R19694 T27186 T27185 arg1Of Pam3Cys,ligand
R19695 T27186 T27187 arg1Of Pam3Cys,(
R19696 T27186 T27191 arg1Of Pam3Cys,","
R19697 T27186 T27192 arg2Of Pam3Cys,infected
R19698 T27186 T27202 arg1Of Pam3Cys,or
R19699 T27186 T27203 arg2Of Pam3Cys,left
R19700 T27186 T27204 arg1Of Pam3Cys,untreated
R19701 T27189 T27187 arg2Of µg/ml,(
R19702 T27189 T27188 arg1Of µg/ml,5
R19703 T27190 T27187 arg3Of ),(
R19704 T27192 T27193 arg1Of infected,with
R19705 T27196 T27193 arg2Of CDC1551,with
R19706 T27196 T27194 arg1Of CDC1551,MTb
R19707 T27196 T27195 arg1Of CDC1551,strain
R19708 T27196 T27197 arg1Of CDC1551,(
R19709 T27199 T27197 arg2Of cells∶bacilli,(
R19710 T27199 T27198 arg1Of cells∶bacilli,1∶1
R19711 T27200 T27197 arg3Of ),(
R19712 T27202 T27201 arg1Of or,","
R19713 T27204 T27182 arg2Of untreated,with
R19714 T27207 T27205 arg2Of hours,After
R19715 T27207 T27206 arg1Of hours,16
R19716 T27211 T27209 arg1Of levels,NFAT5
R19717 T27211 T27210 arg1Of levels,mRNA
R19718 T27211 T27212 arg1Of levels,were
R19719 T27211 T27213 arg2Of levels,measured
R19720 T27213 T27205 arg1Of measured,After
R19721 T27213 T27208 arg1Of measured,","
R19722 T27213 T27212 arg2Of measured,were
R19723 T27216 T27214 arg1Of expression,NFAT5
R19724 T27216 T27215 arg1Of expression,mRNA
R19725 T27216 T27217 arg1Of expression,was
R19726 T27216 T27219 arg2Of expression,increased
R19727 T27219 T27217 arg2Of increased,was
R19728 T27219 T27218 arg1Of increased,significantly
R19729 T27219 T27220 arg1Of increased,when
R19730 T27222 T27221 arg1Of cells,the
R19731 T27222 T27223 arg1Of cells,were
R19732 T27222 T27224 arg2Of cells,incubated
R19733 T27222 T27235 arg2Of cells,infected
R19734 T27224 T27225 arg1Of incubated,with
R19735 T27224 T27234 arg1Of incubated,or
R19736 T27226 T27225 arg2Of Pam3Cys,with
R19737 T27226 T27227 arg1Of Pam3Cys,(
R19738 T27228 T27229 arg1Of *,","
R19739 T27230 T27229 arg2Of p,","
R19740 T27230 T27231 arg1Of p,<
R19741 T27232 T27227 arg2Of 0.05,(
R19742 T27232 T27228 arg1Of 0.05,*
R19743 T27233 T27227 arg3Of ),(
R19744 T27234 T27220 arg2Of or,when
R19745 T27234 T27223 arg2Of or,were
R19746 T27235 T27234 arg2Of infected,or
R19747 T27235 T27236 arg1Of infected,with
R19748 T27237 T27236 arg2Of MTb,with
R19749 T27237 T27238 arg1Of MTb,(
R19750 T27237 T27245 arg1Of MTb,.
R19751 T27237 T27249 modOf MTb,88
R19752 T27239 T27238 arg2Of **,(
R19753 T27239 T27240 arg1Of **,","
R19754 T27241 T27240 arg2Of p,","
R19755 T27241 T27242 arg1Of p,<
R19756 T27241 T27243 arg1Of p,0.01
R19757 T27244 T27238 arg3Of ),(
R19758 T27246 T27245 arg2Of (,.
R19759 T27247 T27245 arg3Of B,.
R19760 T27248 T27249 arg1Of ) MyD,88
R19761 T27248 T27250 arg1Of ) MyD,is import
R19762 T27250 T27249 arg2Of is import,88
R19763 T27250 T27251 arg1Of is import,ant
R19764 T27253 T27251 arg2Of MTb induc,ant
R19765 T27253 T27252 arg1Of MTb induc,for
R19766 T27253 T27254 arg1Of MTb induc,ti
R19767 T27253 T27258 arg1Of MTb induc,re
R19768 T27257 T27254 arg2Of 5 gene exp,ti
R19769 T27257 T27255 arg1Of 5 gene exp,on of
R19770 T27257 T27256 arg1Of 5 gene exp,NFAT
R19771 T27260 T27258 arg2Of in human ,re
R19772 T27260 T27259 arg1Of in human ,ssion
R19773 T27262 T27261 arg1Of cells,THP-1
R19774 T27262 T27263 arg1Of cells,that
R19775 T27262 T27265 arg1Of cells,express
R19776 T27262 T27275 arg1Of cells,were
R19777 T27262 T27276 arg2Of cells,constructed
R19778 T27265 T27264 arg1Of express,constitutively
R19779 T27267 T27265 arg2Of shRNA,express
R19780 T27267 T27266 arg1Of shRNA,lentivirally-delivered
R19781 T27267 T27268 arg1Of shRNA,targeting
R19782 T27269 T27270 arg1Of MyD88,or
R19783 T27270 T27268 arg2Of or,targeting
R19784 T27270 T27273 arg1Of or,targeting
R19785 T27272 T27270 arg2Of shRNA,or
R19786 T27272 T27271 arg1Of shRNA,control
R19787 T27274 T27273 arg2Of GFP,targeting
R19788 T27276 T27275 arg2Of constructed,were
R19789 T27276 T27277 arg1Of constructed,as
R19790 T27276 T27281 arg1Of constructed,and
R19791 T27278 T27277 arg2Of described,as
R19792 T27278 T27279 arg1Of described,in
R19793 T27280 T27279 arg2Of Materials,in
R19794 T27281 T27303 arg1Of and,and
R19795 T27283 T27282 arg1Of Cells,Methods.
R19796 T27283 T27284 arg1Of Cells,were
R19797 T27283 T27285 arg2Of Cells,infected
R19798 T27283 T27295 arg1Of Cells,left
R19799 T27285 T27284 arg2Of infected,were
R19800 T27285 T27286 arg1Of infected,with
R19801 T27285 T27294 arg1Of infected,or
R19802 T27289 T27286 arg2Of CDC1551,with
R19803 T27289 T27287 arg1Of CDC1551,MTb
R19804 T27289 T27288 arg1Of CDC1551,strain
R19805 T27289 T27290 arg1Of CDC1551,(
R19806 T27292 T27290 arg2Of cells∶bacilli,(
R19807 T27292 T27291 arg1Of cells∶bacilli,1∶1
R19808 T27293 T27290 arg3Of ),(
R19809 T27294 T27281 arg2Of or,and
R19810 T27295 T27294 arg2Of left,or
R19811 T27295 T27297 arg1Of left,for
R19812 T27295 T27300 arg1Of left,at
R19813 T27297 T27296 arg1Of for,uninfected
R19814 T27299 T27297 arg2Of hours,for
R19815 T27299 T27298 arg1Of hours,16
R19816 T27301 T27300 arg2Of 37°C,at
R19817 T27303 T27302 arg1Of and,","
R19818 T27304 T27305 arg1Of RNA,was
R19819 T27304 T27306 arg2Of RNA,analyzed
R19820 T27306 T27303 arg2Of analyzed,and
R19821 T27306 T27305 arg2Of analyzed,was
R19822 T27309 T27307 arg1Of levels,NFAT5
R19823 T27309 T27308 arg1Of levels,mRNA
R19824 T27309 T27310 arg1Of levels,were
R19825 T27309 T27312 arg2Of levels,inhibited
R19826 T27312 T27310 arg2Of inhibited,were
R19827 T27312 T27311 arg1Of inhibited,significantly
R19828 T27312 T27313 arg1Of inhibited,in
R19829 T27312 T27324 arg1Of inhibited,compared
R19830 T27315 T27313 arg2Of cells,in
R19831 T27315 T27314 arg1Of cells,the
R19832 T27315 T27316 arg2Of cells,transduced
R19833 T27316 T27317 arg1Of transduced,with
R19834 T27319 T27317 arg2Of shRNA,with
R19835 T27319 T27318 arg1Of shRNA,MyD88-specific
R19836 T27319 T27320 arg1Of shRNA,(
R19837 T27322 T27320 arg2Of bars,(
R19838 T27322 T27321 arg1Of bars,black
R19839 T27323 T27320 arg3Of ),(
R19840 T27325 T27324 arg2Of with,compared
R19841 T27327 T27325 arg2Of cells,with
R19842 T27327 T27326 arg1Of cells,the
R19843 T27327 T27328 arg2Of cells,transduced
R19844 T27328 T27329 arg1Of transduced,with
R19845 T27331 T27329 arg2Of shRNA,with
R19846 T27331 T27330 arg1Of shRNA,control
R19847 T27331 T27332 arg1Of shRNA,(
R19848 T27331 T27336 arg1Of shRNA,in
R19849 T27334 T27332 arg2Of bars,(
R19850 T27334 T27333 arg1Of bars,open
R19851 T27335 T27332 arg3Of ),(
R19852 T27336 T27337 arg1Of in,both
R19853 T27340 T27341 arg1Of absence,or
R19854 T27341 T27336 arg2Of or,in
R19855 T27341 T27338 arg1Of or,","
R19856 T27341 T27339 arg1Of or,the
R19857 T27341 T27343 arg1Of or,of
R19858 T27342 T27341 arg2Of presence,or
R19859 T27345 T27343 arg2Of infection,of
R19860 T27345 T27344 arg1Of infection,MTb
R19861 T27346 T27347 arg1Of TNF,and
R19862 T27348 T27347 arg2Of CD86,and
R19863 T27349 T27346 arg1Of mRNAs,TNF
R19864 T27349 T27348 arg1Of mRNAs,CD86
R19865 T27349 T27353 arg2Of mRNAs,of
R19866 T27349 T27354 arg1Of mRNAs,which
R19867 T27349 T27378 arg1Of mRNAs,are
R19868 T27349 T27379 arg2Of mRNAs,required
R19869 T27352 T27351 arg1Of expression,the
R19870 T27352 T27353 arg1Of expression,of
R19871 T27352 T27355 arg1Of expression,are
R19872 T27352 T27356 arg1Of expression,MyD88-dependent
R19873 T27352 T27358 arg1Of expression,-independent
R19874 T27352 T27366 arg1Of expression,were
R19875 T27352 T27367 arg2Of expression,measured
R19876 T27355 T27361 arg1Of are,","
R19877 T27356 T27357 arg1Of MyD88-dependent,and
R19878 T27357 T27355 arg2Of and,are
R19879 T27357 T27359 arg1Of and,","
R19880 T27357 T27360 arg1Of and,respectively
R19881 T27358 T27357 arg2Of -independent,and
R19882 T27361 T27350 arg1Of ",",","
R19883 T27364 T27362 arg2Of infection,during
R19884 T27364 T27363 arg1Of infection,MTb
R19885 T27367 T27361 arg2Of measured,","
R19886 T27367 T27362 arg1Of measured,during
R19887 T27367 T27365 arg1Of measured,","
R19888 T27367 T27366 arg2Of measured,were
R19889 T27367 T27368 arg1Of measured,as
R19890 T27369 T27370 arg1Of controls.,(
R19891 T27371 T27370 arg2Of C,(
R19892 T27371 T27372 arg1Of C,","
R19893 T27373 T27372 arg2Of D,","
R19894 T27374 T27370 arg3Of ),(
R19895 T27375 T27376 arg1Of IRAK1,and
R19896 T27376 T27368 arg2Of and,as
R19897 T27376 T27369 arg1Of and,controls.
R19898 T27377 T27376 arg2Of TRAF6,and
R19899 T27379 T27378 arg2Of required,are
R19900 T27379 T27380 arg1Of required,for
R19901 T27382 T27380 arg2Of induction,for
R19902 T27382 T27381 arg1Of induction,MTb
R19903 T27382 T27383 arg1Of induction,of
R19904 T27382 T27387 arg1Of induction,in
R19905 T27386 T27383 arg2Of expression,of
R19906 T27386 T27384 arg1Of expression,NFAT5
R19907 T27386 T27385 arg1Of expression,gene
R19908 T27389 T27387 arg2Of monocytes,in
R19909 T27389 T27388 arg1Of monocytes,human
R19910 T27391 T27390 arg1Of cells,THP-1
R19911 T27391 T27392 arg1Of cells,that
R19912 T27391 T27394 arg1Of cells,express
R19913 T27391 T27400 arg1Of cells,were
R19914 T27391 T27401 arg2Of cells,constructed
R19915 T27394 T27393 arg1Of express,constitutively
R19916 T27396 T27395 arg1Of IRAK1-,lentivirally-delivered
R19917 T27396 T27397 arg1Of IRAK1-,or
R19918 T27397 T27394 arg2Of or,express
R19919 T27399 T27397 arg2Of shRNA,or
R19920 T27399 T27398 arg1Of shRNA,TRAF6-specific
R19921 T27401 T27400 arg2Of constructed,were
R19922 T27401 T27402 arg1Of constructed,as
R19923 T27401 T27406 arg1Of constructed,and
R19924 T27403 T27402 arg2Of described,as
R19925 T27403 T27404 arg1Of described,in
R19926 T27405 T27404 arg2Of Materials,in
R19927 T27409 T27407 arg1Of cells,Methods.
R19928 T27409 T27408 arg1Of cells,THP-1
R19929 T27409 T27410 arg1Of cells,expressing
R19930 T27409 T27413 arg1Of cells,were
R19931 T27409 T27414 arg2Of cells,used
R19932 T27412 T27410 arg2Of shRNA,expressing
R19933 T27412 T27411 arg1Of shRNA,control
R19934 T27414 T27406 arg2Of used,and
R19935 T27414 T27413 arg2Of used,were
R19936 T27414 T27415 arg1Of used,as
R19937 T27416 T27415 arg2Of described,as
R19938 T27416 T27417 arg1Of described,in
R19939 T27418 T27417 arg2Of 7B,in
R19940 T27419 T27420 arg1Of Cells,were
R19941 T27419 T27421 arg2Of Cells,infected
R19942 T27419 T27427 arg1Of Cells,left
R19943 T27421 T27420 arg2Of infected,were
R19944 T27421 T27422 arg1Of infected,with
R19945 T27421 T27426 arg1Of infected,or
R19946 T27425 T27422 arg2Of CDC1551,with
R19947 T27425 T27423 arg1Of CDC1551,MTb
R19948 T27425 T27424 arg1Of CDC1551,strain
R19949 T27426 T27435 arg1Of or,and
R19950 T27427 T27426 arg2Of left,or
R19951 T27427 T27429 arg1Of left,for
R19952 T27427 T27432 arg1Of left,at
R19953 T27429 T27428 arg1Of for,uninfected
R19954 T27431 T27429 arg2Of hours,for
R19955 T27431 T27430 arg1Of hours,16
R19956 T27433 T27432 arg2Of 37°C,at
R19957 T27435 T27434 arg1Of and,","
R19958 T27436 T27437 arg1Of RNA,was
R19959 T27436 T27438 arg2Of RNA,analyzed
R19960 T27438 T27435 arg2Of analyzed,and
R19961 T27438 T27437 arg2Of analyzed,was
R19962 T27440 T27439 arg1Of expression,NFAT5
R19963 T27440 T27441 arg1Of expression,was
R19964 T27440 T27443 arg2Of expression,inhibited
R19965 T27443 T27441 arg2Of inhibited,was
R19966 T27443 T27442 arg1Of inhibited,significantly
R19967 T27443 T27444 arg1Of inhibited,in
R19968 T27447 T27444 arg2Of cells,in
R19969 T27447 T27445 arg1Of cells,the
R19970 T27447 T27446 arg1Of cells,MTb-infected
R19971 T27447 T27448 arg1Of cells,expressing
R19972 T27448 T27464 arg1Of expressing,compared
R19973 T27450 T27449 arg1Of IRAK1,either
R19974 T27450 T27451 arg1Of IRAK1,(
R19975 T27450 T27454 arg1Of IRAK1,or
R19976 T27452 T27451 arg2Of C,(
R19977 T27453 T27451 arg3Of ),(
R19978 T27454 T27448 arg2Of or,expressing
R19979 T27457 T27456 arg2Of D,(
R19980 T27458 T27456 arg3Of ),(
R19981 T27459 T27454 arg2Of shRNA,or
R19982 T27459 T27455 arg1Of shRNA,TRAF6
R19983 T27459 T27456 arg1Of shRNA,(
R19984 T27459 T27460 arg1Of shRNA,(
R19985 T27462 T27460 arg2Of bars,(
R19986 T27462 T27461 arg1Of bars,black
R19987 T27463 T27460 arg3Of ),(
R19988 T27465 T27464 arg2Of to,compared
R19989 T27466 T27465 arg2Of cells,to
R19990 T27466 T27467 arg1Of cells,expressing
R19991 T27469 T27467 arg2Of shRNA,expressing
R19992 T27469 T27468 arg1Of shRNA,control
R19993 T27469 T27470 arg1Of shRNA,(
R19994 T27472 T27470 arg2Of bars,(
R19995 T27472 T27471 arg1Of bars,open
R19996 T27473 T27470 arg3Of ),(
R19997 T27474 T27475 arg1Of TNF,and
R19998 T27476 T27475 arg2Of CD86,and
R19999 T27477 T27474 arg1Of mRNAs,TNF
R20000 T27477 T27476 arg1Of mRNAs,CD86
R20001 T27477 T27478 arg1Of mRNAs,","
R20002 T27477 T27480 arg2Of mRNAs,of
R20003 T27477 T27481 arg1Of mRNAs,which
R20004 T27477 T27493 arg1Of mRNAs,were
R20005 T27477 T27494 arg2Of mRNAs,measured
R20006 T27479 T27480 arg1Of both,of
R20007 T27479 T27482 arg1Of both,require
R20008 T27483 T27484 arg1Of IRAK1,and
R20009 T27484 T27482 arg2Of and,require
R20010 T27484 T27486 modOf and,to
R20011 T27484 T27487 arg1Of and,be
R20012 T27484 T27488 arg2Of and,induced
R20013 T27485 T27484 arg2Of TRAF6,and
R20014 T27488 T27486 arg1Of induced,to
R20015 T27488 T27487 arg2Of induced,be
R20016 T27491 T27488 arg1Of activation,induced
R20017 T27491 T27489 arg2Of activation,by
R20018 T27491 T27490 arg1Of activation,PRR
R20019 T27494 T27492 arg1Of measured,","
R20020 T27494 T27493 arg2Of measured,were
R20021 T27494 T27495 arg1Of measured,as
R20022 T27496 T27495 arg2Of controls.,as
R20023 T27496 T27497 arg1Of controls.,(
R20024 T27498 T27499 arg1Of *,","
R20025 T27500 T27499 arg2Of p,","
R20026 T27502 T27497 arg2Of 0.05,(
R20027 T27502 T27498 arg1Of 0.05,*
R20028 T27502 T27501 arg1Of 0.05,<
R20029 T27502 T27503 arg1Of 0.05,;
R20030 T27504 T27503 arg2Of **,;
R20031 T27504 T27505 arg1Of **,","
R20032 T27506 T27505 arg2Of p,","
R20033 T27506 T27507 arg1Of p,<
R20034 T27506 T27508 arg1Of p,0.01
R20035 T27509 T27497 arg3Of ),(

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T27043 2925-2929 Antecedent denotes CD86
T27042 2917-2920 Antecedent denotes TNF
T27041 2945-2950 Anaphor denotes which
T27040 2170-2174 Antecedent denotes CD86
T27039 2162-2165 Antecedent denotes TNF
T27038 2200-2205 Anaphor denotes which
R19651 T27038 T27039 boundBy which,TNF
R19652 T27038 T27040 boundBy which,CD86
R19653 T27041 T27042 boundBy which,TNF
R19654 T27041 T27043 boundBy which,CD86

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T27046 1149-1153 Protein denotes TLR2
T27045 1094-1099 Protein denotes NFAT5
T27044 1027-1032 Protein denotes MyD88
T14926 3907-3912 Protein denotes MyD88
T14925 3835-3838 Protein denotes TNF
T14924 3762-3767 Protein denotes MyD88
T14923 3753-3756 Protein denotes TNF
T14922 3714-3719 Protein denotes NFAT5
T14921 3644-3649 Protein denotes MyD88
T14920 3610-3619 Protein denotes GFP shRNA
T14919 3446-3451 Protein denotes MyD88
T14918 3398-3403 Protein denotes MyD88
T14917 3366-3387 Protein denotes short hairpin (sh)RNA
T14916 3255-3260 Protein denotes NFAT5
T14915 3110-3114 Protein denotes TLR2
T14914 3081-3086 Protein denotes MyD88
T14913 944-949 Protein denotes NFAT5
T14912 765-770 Protein denotes NFAT5
T14911 503-508 Protein denotes NFAT5
T14910 459-463 Protein denotes TLR2
T14909 401-406 Protein denotes NFAT5
T14908 374-378 Protein denotes TLR2
T14907 310-315 Protein denotes NFAT5
T14906 132-137 Protein denotes NFAT5
T14905 42-47 Protein denotes MyD88
T14958 5189-5194 Protein denotes TRAF6
T14957 5179-5184 Protein denotes IRAK1
T14956 5144-5149 Protein denotes MyD88
T14955 5130-5135 Protein denotes MyD88
T14954 5060-5065 Protein denotes NFAT5
T14953 4924-4929 Protein denotes MyD88
T14952 4903-4908 Protein denotes TRAF6
T14951 4892-4897 Protein denotes IRAK1
T14950 4873-4877 Protein denotes CD86
T14949 4839-4843 Protein denotes CD86
T14948 4795-4800 Protein denotes TRAF6
T14947 4785-4790 Protein denotes IRAK1
T14946 4752-4757 Protein denotes MyD88
T14945 4713-4717 Protein denotes CD86
T14944 4633-4636 Protein denotes TNF
T14943 4624-4629 Protein denotes TRAF6
T14942 4614-4619 Protein denotes IRAK1
T14941 4519-4522 Protein denotes TNF
T14940 4475-4480 Protein denotes NFAT5
T14939 4433-4438 Protein denotes TRAF6
T14938 4423-4428 Protein denotes IRAK1
T14937 4367-4372 Protein denotes MyD88
T14936 4322-4327 Protein denotes TRAF6
T14935 4313-4318 Protein denotes IRAK1
T14934 4204-4209 Protein denotes NFAT5
T14933 4137-4142 Protein denotes MyD88
T14932 4113-4118 Protein denotes NFAT5
T14931 4071-4075 Protein denotes CD86
T14930 4034-4037 Protein denotes TNF
T14929 4024-4029 Protein denotes NFAT5
T14928 3983-3988 Protein denotes MyD88
T14927 3930-3934 Protein denotes CD86
T27070 2917-2920 Protein denotes TNF
T27069 2898-2903 Protein denotes shRNA
T27068 2832-2837 Protein denotes TRAF6
T27067 2819-2824 Protein denotes IRAK1
T27066 2730-2735 Protein denotes NFAT5
T27065 2587-2592 Protein denotes shRNA
T27064 2479-2484 Protein denotes TRAF6
T27063 2469-2474 Protein denotes IRAK1
T27062 2364-2369 Protein denotes NFAT5
T27061 2324-2329 Protein denotes TRAF6
T27060 2314-2319 Protein denotes IRAK1
T27059 2210-2215 Protein denotes MyD88
T27058 2170-2174 Protein denotes CD86
T27057 2162-2165 Protein denotes TNF
T27056 2011-2016 Protein denotes MyD88
T27055 1935-1940 Protein denotes NFAT5
T27054 1748-1751 Protein denotes GFP
T27053 1715-1720 Protein denotes MyD88
T27052 1594-1599 Protein denotes NFAT5
T27051 1554-1559 Protein denotes MyD88
T27050 1410-1415 Protein denotes NFAT5
T27049 1377-1382 Protein denotes NFAT5
T27048 1248-1252 Protein denotes TLR2
T27047 1177-1182 Protein denotes NFAT5
T27073 2969-2974 Protein denotes TRAF6
T27072 2959-2964 Protein denotes IRAK1
T27071 2925-2929 Protein denotes CD86

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T27529 2925-2929 http://www.uniprot.org/uniprot/P42081 denotes CD86
T27528 2170-2174 http://www.uniprot.org/uniprot/P42081 denotes CD86
T27527 2917-2920 http://www.uniprot.org/uniprot/P01375 denotes TNF
T27526 2162-2165 http://www.uniprot.org/uniprot/P01375 denotes TNF
T27525 1748-1751 http://www.uniprot.org/uniprot/Q9U6Y4 denotes GFP
T27524 1248-1252 http://www.uniprot.org/uniprot/O60603 denotes TLR2
T27523 1149-1153 http://www.uniprot.org/uniprot/O60603 denotes TLR2
T27522 2730-2735 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15651 5189-5194 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T15650 4903-4908 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T15615 4204-4209 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15614 4113-4118 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15613 4024-4029 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15612 3714-3719 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15611 3255-3260 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15610 944-949 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15609 765-770 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15608 503-508 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15607 401-406 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15606 310-315 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15605 132-137 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15649 4795-4800 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T15648 4624-4629 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T15647 4433-4438 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T15646 4322-4327 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T15645 4873-4877 http://www.uniprot.org/uniprot/P42081 denotes CD86
T15644 4839-4843 http://www.uniprot.org/uniprot/P42081 denotes CD86
T15643 4713-4717 http://www.uniprot.org/uniprot/P42081 denotes CD86
T15642 4071-4075 http://www.uniprot.org/uniprot/P42081 denotes CD86
T15641 3930-3934 http://www.uniprot.org/uniprot/P42081 denotes CD86
T15640 4633-4636 http://www.uniprot.org/uniprot/P01375 denotes TNF
T15639 4519-4522 http://www.uniprot.org/uniprot/P01375 denotes TNF
T15638 4034-4037 http://www.uniprot.org/uniprot/P01375 denotes TNF
T15637 3835-3838 http://www.uniprot.org/uniprot/P01375 denotes TNF
T15636 3753-3756 http://www.uniprot.org/uniprot/P01375 denotes TNF
T15635 3610-3613 http://www.uniprot.org/uniprot/Q9U6Y4 denotes GFP
T15634 3110-3114 http://www.uniprot.org/uniprot/O60603 denotes TLR2
T15633 459-463 http://www.uniprot.org/uniprot/O60603 denotes TLR2
T15632 374-378 http://www.uniprot.org/uniprot/O60603 denotes TLR2
T15631 5144-5149 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15630 5130-5135 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15629 4924-4929 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15628 4752-4757 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15627 4367-4372 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15626 4137-4142 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15625 3983-3988 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15624 3907-3912 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15623 3762-3767 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15622 3644-3649 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15621 3446-3451 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15620 3398-3403 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15619 3081-3086 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15618 42-47 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T15617 5060-5065 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T15616 4475-4480 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T27521 2364-2369 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T27520 1935-1940 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T27519 1594-1599 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T27518 1410-1415 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T27517 1377-1382 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T27516 1177-1182 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T27515 1094-1099 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T27514 2210-2215 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T27513 2011-2016 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T27512 1715-1720 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T27511 1554-1559 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T27510 1027-1032 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T27533 2969-2974 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T27532 2832-2837 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T27531 2479-2484 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T27530 2324-2329 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6

GO-BP

Id Subject Object Predicate Lexical cue
T27079 2370-2385 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T27078 1600-1615 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T27077 1188-1197 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T27076 1183-1197 http://purl.obolibrary.org/obo/GO_0009299 denotes mRNA synthesis
T27075 1042-1059 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling cascade
T14974 4210-4223 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T14973 4099-4109 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T14972 101-109 http://purl.obolibrary.org/obo/GO_0007349 denotes cellular
T14971 58-75 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling cascade
T14970 4333-4342 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T14969 230-239 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T14968 58-67 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T14967 5066-5081 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T14966 4801-4816 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T14965 4718-4733 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T14964 4637-4652 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T14963 4523-4538 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T14962 3261-3276 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T14961 950-965 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T14960 316-331 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T27074 1042-1051 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

GO-MF

Id Subject Object Predicate Lexical cue
T27080 1262-1268 http://purl.obolibrary.org/obo/GO_0005488 denotes ligand

GO-CC

Id Subject Object Predicate Lexical cue
T27089 2873-2878 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T27088 2795-2800 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T27087 2562-2567 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T27086 2412-2417 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T27085 2063-2068 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T27084 1989-1994 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T27083 1642-1647 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T27082 1469-1474 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T27081 1218-1223 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14983 5101-5106 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14982 4251-4256 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14981 3666-3671 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14980 3556-3561 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14979 3473-3478 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14978 701-706 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14977 617-622 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14976 572-577 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14975 431-436 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T26970 2917-3059 Sentence denotes TNF and CD86 mRNAs, both of which require IRAK1 and TRAF6 to be induced by PRR activation, were measured as controls. (*, p<0.05; **, p<0.01).
T26969 2730-2916 Sentence denotes NFAT5 expression was significantly inhibited in the MTb-infected cells expressing either IRAK1 (C) or TRAF6 (D) shRNA (black bars) compared to cells expressing control shRNA (open bars).
T26968 2623-2729 Sentence denotes Cells were infected with MTb strain CDC1551 or left uninfected for 16 hours at 37°C, and RNA was analyzed.
T26967 2406-2622 Sentence denotes THP-1 cells that constitutively express lentivirally-delivered IRAK1- or TRAF6-specific shRNA were constructed as described in Materials and Methods. THP-1 cells expressing control shRNA were used as described in 7B.
T26966 2162-2405 Sentence denotes TNF and CD86 mRNAs, the expression of which are MyD88-dependent and -independent, respectively, during MTb infection, were measured as controls. (C, D) IRAK1 and TRAF6 are required for MTb induction of NFAT5 gene expression in human monocytes.
T26965 1935-2161 Sentence denotes NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection.
T26964 1636-1934 Sentence denotes THP-1 cells that constitutively express lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP were constructed as described in Materials and Methods. Cells were infected with MTb strain CDC1551 (1∶1 cells∶bacilli) or left uninfected for 16 hours at 37°C, and RNA was analyzed.
T26963 1410-1635 Sentence denotes NFAT5 mRNA expression was significantly increased when the cells were incubated with Pam3Cys (*, p<0.05) or infected with MTb (**, p<0.01). (B) MyD88 is important for MTb induction of NFAT5 gene expression in human monocytes.
T26962 1361-1409 Sentence denotes After 16 hours, NFAT5 mRNA levels were measured.
T26961 1212-1360 Sentence denotes THP-1 cells were incubated with the TLR2-specific ligand Pam3Cys (5 µg/ml), infected with MTb strain CDC1551 (1∶1 cells∶bacilli), or left untreated.
T26960 1131-1211 Sentence denotes (A) Engagement of TLR2 significantly enhances NFAT5 mRNA synthesis in monocytes.
T26959 1023-1130 Sentence denotes The MyD88-mediated signaling cascade is important for MTb induction of NFAT5 expression in human monocytes.
T14784 4985-5195 Sentence denotes Taken together, these results clearly demonstrate that MTb upregulation of NFAT5 gene expression in human monocytic cells requires activation of MyD88 and the MyD88-associated adaptor molecules IRAK1 and TRAF6.
T14783 4704-4984 Sentence denotes Although CD86 gene expression did not depend on MyD88 (Figure 7B), abrogation of IRAK1 and TRAF6 gene expression significantly reduced CD86 mRNA levels, indicating that CD86 expression is IRAK1- and TRAF6-dependent, but MyD88-independent in MTb-infected monocytes (Figures 7C–7D).
T14782 4494-4703 Sentence denotes As expected, MTb-induced TNF gene expression was also significantly reduced (Figures 7C–7D), consistent with a role for IRAK1 and TRAF6 in TNF gene expression secondary to MTb infection as previously reported.
T14781 4374-4493 Sentence denotes As shown in Figures 7C and 7D, knockdown of both IRAK1 and TRAF6 significantly inhibited MTb induced NFAT5 mRNA levels.
T14780 4144-4373 Sentence denotes To futher dissect the pathway mediating MTb upregulation of NFAT5 transcription, we also constructed THP-1 cells transduced with lentivirally-delivered shRNAs targeting IRAK1 or TRAF6, two signaling molecules downstream of MyD88.
T14779 4089-4143 Sentence denotes Thus, MTb regulation of NFAT5 is dependent upon MyD88.
T14778 3947-4088 Sentence denotes As shown in Figure 7B, knockdown of MyD88 specifically inhibited MTb-induced NFAT5 and TNF mRNA levels and had no impact on CD86 mRNA levels.
T14777 3852-3946 Sentence denotes For a negative control, we measured mRNA levels of the MyD88-independent gene CD86 [55], [56].
T14776 3747-3851 Sentence denotes Since TNF is a MyD88-dependent gene [21], [54], [55], as a positive control we measured TNF mRNA levels.
T14775 3638-3746 Sentence denotes These MyD88 knockdown THP-1 cells were then infected with MTb (CDC1551) and NFAT5 mRNA levels were examined.
T14774 3405-3637 Sentence denotes Real-time PCR analysis demonstrated that MyD88 mRNA levels in these cells were constitutively and significantly reduced in comparison to control THP-1 cells transduced with a lentivirus expressing control GFP shRNA (data not shown).
T14773 3144-3404 Sentence denotes To confirm that this protein and, therefore, that this TLR-dependent pathway is important for MTb induction of NFAT5 gene expression, we constructed a THP-1 cell line that constitutively expresses a lentivirally-delivered short hairpin (sh)RNA targeting MyD88.
T14772 3060-3143 Sentence denotes The adaptor molecule MyD88 transmits signals upon TLR2 ligation (reviewed in [53]).
T14771 733-978 Sentence denotes Notably, MTb infection enhanced NFAT5 mRNA levels to a greater extent than Pam3Cys stimulation, suggesting that additional PRRs may be triggered during actual MTb infection, augmenting its stimulatory effect on NFAT5 gene expression (Figure 7A).
T14770 636-732 Sentence denotes As a positive control for this experiment we also infected THP-1 cells with CDC1551 (Figure 7A).
T14769 420-635 Sentence denotes When THP-1 cells were treated with the TLR2-specific agonist Pam3Cys for 16 hours, NFAT5 mRNA levels were significantly increased in Pam3Cys-stimulated cells as compared to mock-stimulated control cells (Figure 7A).
T14768 333-419 Sentence denotes We began by examining the requirement of TLR2 ligation in enhancing NFAT5 mRNA levels.
T14767 76-332 Sentence denotes To begin to decipher the cellular mechanisms underlying NFAT5-dependent, MTb-induced HIV-1 replication, we next investigated the requirement for specific signaling molecules in the TLR pathway that are required for MTb stimulation of NFAT5 gene expression.
T239 0-75 Sentence denotes MTb induces NFAT5 gene expression via the MyD88-dependent signaling cascade
T240 76-332 Sentence denotes To begin to decipher the cellular mechanisms underlying NFAT5-dependent, MTb-induced HIV-1 replication, we next investigated the requirement for specific signaling molecules in the TLR pathway that are required for MTb stimulation of NFAT5 gene expression.
T241 333-419 Sentence denotes We began by examining the requirement of TLR2 ligation in enhancing NFAT5 mRNA levels.
T242 420-635 Sentence denotes When THP-1 cells were treated with the TLR2-specific agonist Pam3Cys for 16 hours, NFAT5 mRNA levels were significantly increased in Pam3Cys-stimulated cells as compared to mock-stimulated control cells (Figure 7A).
T243 636-732 Sentence denotes As a positive control for this experiment we also infected THP-1 cells with CDC1551 (Figure 7A).
T244 733-978 Sentence denotes Notably, MTb infection enhanced NFAT5 mRNA levels to a greater extent than Pam3Cys stimulation, suggesting that additional PRRs may be triggered during actual MTb infection, augmenting its stimulatory effect on NFAT5 gene expression (Figure 7A).
T245 979-1130 Sentence denotes 10.1371/journal.ppat.1002620.g007 Figure 7 The MyD88-mediated signaling cascade is important for MTb induction of NFAT5 expression in human monocytes.
T246 1131-1211 Sentence denotes (A) Engagement of TLR2 significantly enhances NFAT5 mRNA synthesis in monocytes.
T247 1212-1360 Sentence denotes THP-1 cells were incubated with the TLR2-specific ligand Pam3Cys (5 µg/ml), infected with MTb strain CDC1551 (1∶1 cells∶bacilli), or left untreated.
T248 1361-1409 Sentence denotes After 16 hours, NFAT5 mRNA levels were measured.
T249 1410-1635 Sentence denotes NFAT5 mRNA expression was significantly increased when the cells were incubated with Pam3Cys (*, p<0.05) or infected with MTb (**, p<0.01). (B) MyD88 is important for MTb induction of NFAT5 gene expression in human monocytes.
T250 1636-1807 Sentence denotes THP-1 cells that constitutively express lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP were constructed as described in Materials and Methods.
T251 1808-1934 Sentence denotes Cells were infected with MTb strain CDC1551 (1∶1 cells∶bacilli) or left uninfected for 16 hours at 37°C, and RNA was analyzed.
T252 1935-2161 Sentence denotes NFAT5 mRNA levels were significantly inhibited in the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control shRNA (open bars) in both, the absence or presence of MTb infection.
T253 2162-2405 Sentence denotes TNF and CD86 mRNAs, the expression of which are MyD88-dependent and -independent, respectively, during MTb infection, were measured as controls. (C, D) IRAK1 and TRAF6 are required for MTb induction of NFAT5 gene expression in human monocytes.
T254 2406-2555 Sentence denotes THP-1 cells that constitutively express lentivirally-delivered IRAK1- or TRAF6-specific shRNA were constructed as described in Materials and Methods.
T255 2556-2622 Sentence denotes THP-1 cells expressing control shRNA were used as described in 7B.
T256 2623-2729 Sentence denotes Cells were infected with MTb strain CDC1551 or left uninfected for 16 hours at 37°C, and RNA was analyzed.
T257 2730-2916 Sentence denotes NFAT5 expression was significantly inhibited in the MTb-infected cells expressing either IRAK1 (C) or TRAF6 (D) shRNA (black bars) compared to cells expressing control shRNA (open bars).
T258 2917-3059 Sentence denotes TNF and CD86 mRNAs, both of which require IRAK1 and TRAF6 to be induced by PRR activation, were measured as controls. (*, p<0.05; **, p<0.01).
T259 3060-3143 Sentence denotes The adaptor molecule MyD88 transmits signals upon TLR2 ligation (reviewed in [53]).
T260 3144-3404 Sentence denotes To confirm that this protein and, therefore, that this TLR-dependent pathway is important for MTb induction of NFAT5 gene expression, we constructed a THP-1 cell line that constitutively expresses a lentivirally-delivered short hairpin (sh)RNA targeting MyD88.
T261 3405-3637 Sentence denotes Real-time PCR analysis demonstrated that MyD88 mRNA levels in these cells were constitutively and significantly reduced in comparison to control THP-1 cells transduced with a lentivirus expressing control GFP shRNA (data not shown).
T262 3638-3746 Sentence denotes These MyD88 knockdown THP-1 cells were then infected with MTb (CDC1551) and NFAT5 mRNA levels were examined.
T263 3747-3851 Sentence denotes Since TNF is a MyD88-dependent gene [21], [54], [55], as a positive control we measured TNF mRNA levels.
T264 3852-3946 Sentence denotes For a negative control, we measured mRNA levels of the MyD88-independent gene CD86 [55], [56].
T265 3947-4088 Sentence denotes As shown in Figure 7B, knockdown of MyD88 specifically inhibited MTb-induced NFAT5 and TNF mRNA levels and had no impact on CD86 mRNA levels.
T266 4089-4143 Sentence denotes Thus, MTb regulation of NFAT5 is dependent upon MyD88.
T267 4144-4373 Sentence denotes To futher dissect the pathway mediating MTb upregulation of NFAT5 transcription, we also constructed THP-1 cells transduced with lentivirally-delivered shRNAs targeting IRAK1 or TRAF6, two signaling molecules downstream of MyD88.
T268 4374-4493 Sentence denotes As shown in Figures 7C and 7D, knockdown of both IRAK1 and TRAF6 significantly inhibited MTb induced NFAT5 mRNA levels.
T269 4494-4703 Sentence denotes As expected, MTb-induced TNF gene expression was also significantly reduced (Figures 7C–7D), consistent with a role for IRAK1 and TRAF6 in TNF gene expression secondary to MTb infection as previously reported.
T270 4704-4984 Sentence denotes Although CD86 gene expression did not depend on MyD88 (Figure 7B), abrogation of IRAK1 and TRAF6 gene expression significantly reduced CD86 mRNA levels, indicating that CD86 expression is IRAK1- and TRAF6-dependent, but MyD88-independent in MTb-infected monocytes (Figures 7C–7D).
T271 4985-5195 Sentence denotes Taken together, these results clearly demonstrate that MTb upregulation of NFAT5 gene expression in human monocytic cells requires activation of MyD88 and the MyD88-associated adaptor molecules IRAK1 and TRAF6.

simple1

Id Subject Object Predicate Lexical cue
T27124 2969-2974 Protein denotes TRAF6
T27123 2959-2964 Protein denotes IRAK1
T27122 2925-2929 Protein denotes CD86
T27121 2917-2920 Protein denotes TNF
T27120 2898-2903 Protein denotes shRNA
T27119 2832-2837 Protein denotes TRAF6
T27118 2819-2824 Protein denotes IRAK1
T27117 2730-2735 Protein denotes NFAT5
T27116 2587-2592 Protein denotes shRNA
T27115 2479-2484 Protein denotes TRAF6
T27114 2469-2474 Protein denotes IRAK1
T27113 2364-2369 Protein denotes NFAT5
T27112 2324-2329 Protein denotes TRAF6
T27111 2314-2319 Protein denotes IRAK1
T27110 2210-2215 Protein denotes MyD88
T27109 2170-2174 Protein denotes CD86
T27108 2162-2165 Protein denotes TNF
T27107 2011-2016 Protein denotes MyD88
T27106 1935-1940 Protein denotes NFAT5
T27105 1748-1751 Protein denotes GFP
T27104 1715-1720 Protein denotes MyD88
T27103 1594-1599 Protein denotes NFAT5
T27102 1554-1559 Protein denotes MyD88
T27101 1410-1415 Protein denotes NFAT5
T27100 1377-1382 Protein denotes NFAT5
T27099 1248-1252 Protein denotes TLR2
T27098 1177-1182 Protein denotes NFAT5
T27097 1149-1153 Protein denotes TLR2
T27096 1094-1099 Protein denotes NFAT5
T27095 1027-1032 Protein denotes MyD88
T15038 5189-5194 Protein denotes TRAF6
T15037 5179-5184 Protein denotes IRAK1
T15036 5144-5149 Protein denotes MyD88
T15035 5130-5135 Protein denotes MyD88
T15034 5060-5065 Protein denotes NFAT5
T15033 4924-4929 Protein denotes MyD88
T15032 4903-4908 Protein denotes TRAF6
T15031 4892-4897 Protein denotes IRAK1
T15030 4873-4877 Protein denotes CD86
T15029 4839-4843 Protein denotes CD86
T15028 4795-4800 Protein denotes TRAF6
T15027 4785-4790 Protein denotes IRAK1
T15026 4752-4757 Protein denotes MyD88
T15025 4713-4717 Protein denotes CD86
T15024 4633-4636 Protein denotes TNF
T15023 4624-4629 Protein denotes TRAF6
T15022 4614-4619 Protein denotes IRAK1
T15021 4519-4522 Protein denotes TNF
T15020 4475-4480 Protein denotes NFAT5
T15019 4433-4438 Protein denotes TRAF6
T15018 4423-4428 Protein denotes IRAK1
T15017 4367-4372 Protein denotes MyD88
T15016 4322-4327 Protein denotes TRAF6
T15015 4313-4318 Protein denotes IRAK1
T15014 4204-4209 Protein denotes NFAT5
T15013 4137-4142 Protein denotes MyD88
T15012 4113-4118 Protein denotes NFAT5
T15011 4071-4075 Protein denotes CD86
T15010 4034-4037 Protein denotes TNF
T15009 4024-4029 Protein denotes NFAT5
T15008 3983-3988 Protein denotes MyD88
T15007 3930-3934 Protein denotes CD86
T15006 3907-3912 Protein denotes MyD88
T15005 3835-3838 Protein denotes TNF
T15004 3762-3767 Protein denotes MyD88
T15003 3753-3756 Protein denotes TNF
T15002 3714-3719 Protein denotes NFAT5
T15001 3644-3649 Protein denotes MyD88
T15000 3610-3619 Protein denotes GFP shRNA
T14999 3446-3451 Protein denotes MyD88
T14998 3398-3403 Protein denotes MyD88
T14997 3366-3387 Protein denotes short hairpin (sh)RNA
T14996 3255-3260 Protein denotes NFAT5
T14995 3110-3114 Protein denotes TLR2
T14994 3081-3086 Protein denotes MyD88
T14993 944-949 Protein denotes NFAT5
T14992 765-770 Protein denotes NFAT5
T14991 503-508 Protein denotes NFAT5
T14990 459-463 Protein denotes TLR2
T14989 401-406 Protein denotes NFAT5
T14988 374-378 Protein denotes TLR2
T14987 310-315 Protein denotes NFAT5
T14986 132-137 Protein denotes NFAT5
T14985 42-47 Protein denotes MyD88

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T28243 2951-2958 Positive_regulation denotes require
T28242 2981-2988 Positive_regulation denotes induced
T28241 2736-2746 Gene_expression denotes expression
T28240 2765-2774 Negative_regulation denotes inhibited
T28239 2879-2889 Gene_expression denotes expressing
T28238 2801-2811 Gene_expression denotes expressing
T28237 2568-2578 Gene_expression denotes expressing
T28236 2438-2445 Gene_expression denotes express
T28235 2334-2342 Positive_regulation denotes required
T28234 2351-2360 Positive_regulation denotes induction
T28233 2375-2385 Gene_expression denotes expression
T28232 2216-2225 Regulation denotes dependent
T28231 2186-2196 Gene_expression denotes expression
T28230 1972-1981 Negative_regulation denotes inhibited
T28229 1946-1952 Transcription denotes levels
T28228 1668-1675 Gene_expression denotes express
T16771 4188-4200 Positive_regulation denotes upregulation
T16770 4210-4223 Transcription denotes transcription
T16769 4099-4109 Regulation denotes regulation
T16768 4043-4049 Transcription denotes levels
T16767 4012-4023 Positive_regulation denotes MTb-induced
T16766 4081-4087 Transcription denotes levels
T16765 4061-4067 Regulation denotes impact
T16764 4002-4011 Negative_regulation denotes inhibited
T16763 3970-3979 Negative_regulation denotes knockdown
T16762 3844-3850 Transcription denotes levels
T16761 3725-3731 Transcription denotes levels
T16760 3650-3659 Negative_regulation denotes knockdown
T16759 3517-3524 Negative_regulation denotes reduced
T16758 3457-3463 Transcription denotes levels
T16757 3266-3276 Gene_expression denotes expression
T16756 3224-3233 Positive_regulation denotes important
T16755 3242-3251 Positive_regulation denotes induction
T16754 3331-3340 Gene_expression denotes expresses
T16753 3115-3123 Binding denotes ligation
T16752 955-965 Gene_expression denotes expression
T16751 907-917 Positive_regulation denotes augmenting
T16750 776-782 Transcription denotes levels
T16749 934-940 Regulation denotes effect
T16748 756-764 Positive_regulation denotes enhanced
T16747 514-520 Transcription denotes levels
T16746 540-549 Positive_regulation denotes increased
T16745 391-400 Positive_regulation denotes enhancing
T16744 412-418 Transcription denotes levels
T16743 359-370 Positive_regulation denotes requirement
T16742 379-387 Binding denotes ligation
T16741 321-331 Gene_expression denotes expression
T16738 5189-5194 Protein denotes TRAF6
T16737 5179-5184 Protein denotes IRAK1
T16736 5144-5149 Protein denotes MyD88
T16735 5130-5135 Protein denotes MyD88
T16734 5060-5065 Protein denotes NFAT5
T16733 4924-4929 Protein denotes MyD88
T16732 4903-4908 Protein denotes TRAF6
T16731 4892-4897 Protein denotes IRAK1
T16730 4873-4877 Protein denotes CD86
T16729 4839-4843 Protein denotes CD86
T16728 4795-4800 Protein denotes TRAF6
T16727 4785-4790 Protein denotes IRAK1
T16726 4752-4757 Protein denotes MyD88
T16725 4713-4717 Protein denotes CD86
T16724 4633-4636 Protein denotes TNF
T16723 4624-4629 Protein denotes TRAF6
T16722 4614-4619 Protein denotes IRAK1
T16721 4519-4522 Protein denotes TNF
T16720 4475-4480 Protein denotes NFAT5
T16719 4433-4438 Protein denotes TRAF6
T16718 4423-4428 Protein denotes IRAK1
T16717 4367-4372 Protein denotes MyD88
T16716 4322-4327 Protein denotes TRAF6
T16715 4313-4318 Protein denotes IRAK1
T16714 4204-4209 Protein denotes NFAT5
T16713 4137-4142 Protein denotes MyD88
T16712 4113-4118 Protein denotes NFAT5
T16711 4071-4075 Protein denotes CD86
T16710 4034-4037 Protein denotes TNF
T16709 4024-4029 Protein denotes NFAT5
T16708 3983-3988 Protein denotes MyD88
T16707 3930-3934 Protein denotes CD86
T16706 3907-3912 Protein denotes MyD88
T16705 3835-3838 Protein denotes TNF
T16704 3762-3767 Protein denotes MyD88
T16703 3753-3756 Protein denotes TNF
T16702 3714-3719 Protein denotes NFAT5
T16701 3644-3649 Protein denotes MyD88
T16700 3610-3619 Protein denotes GFP shRNA
T16699 3446-3451 Protein denotes MyD88
T16698 3398-3403 Protein denotes MyD88
T16697 3366-3387 Protein denotes short hairpin (sh)RNA
T16696 3255-3260 Protein denotes NFAT5
T16695 3110-3114 Protein denotes TLR2
T16694 3081-3086 Protein denotes MyD88
T16693 765-770 Protein denotes NFAT5
T16692 944-949 Protein denotes NFAT5
T16691 503-508 Protein denotes NFAT5
T16690 459-463 Protein denotes TLR2
T16689 401-406 Protein denotes NFAT5
T16688 374-378 Protein denotes TLR2
T16687 310-315 Protein denotes NFAT5
T16686 132-137 Protein denotes NFAT5
T16685 42-47 Protein denotes MyD88
T16794 5116-5126 Positive_regulation denotes activation
T16793 5044-5056 Positive_regulation denotes upregulation
T16792 5071-5081 Gene_expression denotes expression
T16791 5107-5115 Positive_regulation denotes requires
T16790 4831-4838 Negative_regulation denotes reduced
T16789 4723-4733 Gene_expression denotes expression
T16788 4849-4855 Transcription denotes levels
T16787 4909-4918 Positive_regulation denotes dependent
T16786 4742-4748 Positive_regulation denotes depend
T16785 4878-4888 Gene_expression denotes expression
T16784 4771-4781 Negative_regulation denotes abrogation
T16783 4806-4816 Gene_expression denotes expression
T16782 4507-4518 Positive_regulation denotes MTb-induced
T16781 4605-4609 Positive_regulation denotes role
T16780 4528-4538 Gene_expression denotes expression
T16779 4642-4652 Gene_expression denotes expression
T16778 4562-4569 Negative_regulation denotes reduced
T16777 4405-4414 Negative_regulation denotes knockdown
T16776 4467-4474 Positive_regulation denotes induced
T16775 4486-4492 Transcription denotes levels
T16774 4453-4462 Negative_regulation denotes inhibited
T16773 4303-4312 Regulation denotes targeting
T16772 4174-4183 Positive_regulation denotes mediating
T28227 1605-1615 Gene_expression denotes expression
T28226 1581-1590 Positive_regulation denotes induction
T28225 1450-1459 Positive_regulation denotes increased
T28224 1421-1431 Transcription denotes expression
T28223 1388-1394 Transcription denotes levels
T28222 1188-1197 Transcription denotes synthesis
T28221 1168-1176 Positive_regulation denotes enhances
T28220 1135-1145 Binding denotes Engagement
T28219 1100-1110 Gene_expression denotes expression
T28218 1081-1090 Positive_regulation denotes induction
T28217 2969-2974 Protein denotes TRAF6
T28216 2959-2964 Protein denotes IRAK1
T28215 2925-2929 Protein denotes CD86
T28214 2917-2920 Protein denotes TNF
T28213 2898-2903 Protein denotes shRNA
T28212 2832-2837 Protein denotes TRAF6
T28211 2819-2824 Protein denotes IRAK1
T28210 2730-2735 Protein denotes NFAT5
T28209 2587-2592 Protein denotes shRNA
T28208 2479-2484 Protein denotes TRAF6
T28207 2469-2474 Protein denotes IRAK1
T28206 2364-2369 Protein denotes NFAT5
T28205 2324-2329 Protein denotes TRAF6
T28204 2314-2319 Protein denotes IRAK1
T28203 2210-2215 Protein denotes MyD88
T28202 2170-2174 Protein denotes CD86
T28201 2162-2165 Protein denotes TNF
T28200 2011-2016 Protein denotes MyD88
T28199 1935-1940 Protein denotes NFAT5
T28198 1748-1751 Protein denotes GFP
T28197 1715-1720 Protein denotes MyD88
T28196 1594-1599 Protein denotes NFAT5
T28195 1554-1559 Protein denotes MyD88
T28194 1410-1415 Protein denotes NFAT5
T28193 1377-1382 Protein denotes NFAT5
T28192 1248-1252 Protein denotes TLR2
T28191 1177-1182 Protein denotes NFAT5
T28190 1149-1153 Protein denotes TLR2
T28189 1094-1099 Protein denotes NFAT5
T28188 1027-1032 Protein denotes MyD88
R12364 T16687 T16741 themeOf NFAT5,expression
R12365 T16688 T16742 themeOf TLR2,ligation
R12366 T16689 T16745 themeOf NFAT5,enhancing
R12367 T16689 T16744 themeOf NFAT5,levels
R12368 T16691 T16747 themeOf NFAT5,levels
R12369 T16691 T16746 themeOf NFAT5,increased
R12370 T16692 T16752 themeOf NFAT5,expression
R12371 T16693 T16748 themeOf NFAT5,enhanced
R12372 T16693 T16750 themeOf NFAT5,levels
R12373 T16695 T16753 themeOf TLR2,ligation
R12374 T16696 T16757 themeOf NFAT5,expression
R12375 T16697 T16754 themeOf short hairpin (sh)RNA,expresses
R12376 T16698 T16754 themeOf MyD88,expresses
R12377 T16699 T16759 themeOf MyD88,reduced
R12378 T16699 T16758 themeOf MyD88,levels
R12379 T16701 T16760 themeOf MyD88,knockdown
R12380 T16702 T16761 themeOf NFAT5,levels
R12381 T16705 T16762 themeOf TNF,levels
R12382 T16708 T16763 themeOf MyD88,knockdown
R12383 T16709 T16764 themeOf NFAT5,inhibited
R12384 T16709 T16767 themeOf NFAT5,MTb-induced
R12385 T16710 T16764 themeOf TNF,inhibited
R12386 T16710 T16767 themeOf TNF,MTb-induced
R12387 T16710 T16768 themeOf TNF,levels
R12388 T16711 T16765 themeOf CD86,impact
R12389 T16711 T16766 themeOf CD86,levels
R12390 T16712 T16769 themeOf NFAT5,regulation
R12391 T16714 T16770 themeOf NFAT5,transcription
R12392 T16715 T16773 themeOf IRAK1,targeting
R12393 T16716 T16773 themeOf TRAF6,targeting
R12394 T16718 T16777 themeOf IRAK1,knockdown
R12395 T16719 T16777 themeOf TRAF6,knockdown
R12396 T16720 T16774 themeOf NFAT5,inhibited
R12397 T16720 T16776 themeOf NFAT5,induced
R12398 T16720 T16775 themeOf NFAT5,levels
R12399 T16721 T16780 themeOf TNF,expression
R12400 T16722 T16781 causeOf IRAK1,role
R12401 T16724 T16779 themeOf TNF,expression
R12402 T16725 T16789 themeOf CD86,expression
R12403 T16726 T16786 themeOf MyD88,depend
R12404 T16727 T16783 themeOf IRAK1,expression
R12405 T16728 T16783 themeOf TRAF6,expression
R12406 T16729 T16790 themeOf CD86,reduced
R12407 T16729 T16788 themeOf CD86,levels
R12408 T16730 T16785 themeOf CD86,expression
R12409 T16731 T16787 themeOf IRAK1,dependent
R12410 T16734 T16792 themeOf NFAT5,expression
R12411 T16735 T16794 themeOf MyD88,activation
R12412 T16737 T16791 themeOf IRAK1,requires
R12413 T16738 T16791 themeOf TRAF6,requires
R12415 T16745 T16743 themeOf enhancing,requirement
R12416 T16749 T16751 themeOf effect,augmenting
R12417 T16752 T16749 themeOf expression,effect
R12418 T16755 T16756 themeOf induction,important
R12419 T16757 T16755 themeOf expression,induction
R12420 T16770 T16771 themeOf transcription,upregulation
R12421 T16771 T16772 themeOf upregulation,mediating
R12422 T16779 T16781 themeOf expression,role
R12423 T16780 T16778 themeOf expression,reduced
R12424 T16780 T16782 themeOf expression,MTb-induced
R12425 T16783 T16784 themeOf expression,abrogation
R12426 T16783 T16784 themeOf expression,abrogation
R12427 T16785 T16787 themeOf expression,dependent
R12428 T16789 T16786 themeOf expression,depend
R12429 T16792 T16793 themeOf expression,upregulation
R12430 T16794 T16791 themeOf activation,requires
R20575 T28189 T28219 themeOf NFAT5,expression
R20576 T28190 T28220 themeOf TLR2,Engagement
R20577 T28191 T28222 themeOf NFAT5,synthesis
R20578 T28193 T28223 themeOf NFAT5,levels
R20579 T28194 T28224 themeOf NFAT5,expression
R20580 T28196 T28227 themeOf NFAT5,expression
R20587 T28204 T28235 themeOf IRAK1,required
R20588 T28205 T28235 causeOf TRAF6,required
R20589 T28206 T28233 themeOf NFAT5,expression
R20590 T28207 T28236 themeOf IRAK1,express
R20591 T28209 T28237 themeOf shRNA,expressing
R20592 T28210 T28241 themeOf NFAT5,expression
R20593 T28211 T28238 themeOf IRAK1,expressing
R20594 T28212 T28238 themeOf TRAF6,expressing
R20595 T28213 T28239 themeOf shRNA,expressing
R20596 T28216 T28243 themeOf IRAK1,require
R20597 T28216 T28242 themeOf IRAK1,induced
R20598 T28219 T28218 themeOf expression,induction
R20599 T28222 T28221 themeOf synthesis,enhances
R20600 T28224 T28225 themeOf expression,increased
R20604 T28233 T28234 themeOf expression,induction
R20605 T28241 T28240 themeOf expression,inhibited
R20581 T28197 T28228 themeOf MyD88,express
R20582 T28198 T28228 themeOf GFP,express
R20583 T28199 T28229 themeOf NFAT5,levels
R20584 T28199 T28230 themeOf NFAT5,inhibited
R20585 T28201 T28231 themeOf TNF,expression
R20586 T28202 T28231 themeOf CD86,expression
R20601 T28227 T28226 themeOf expression,induction
R20602 T28231 T28232 themeOf expression,dependent
R20603 T28231 T28232 themeOf expression,dependent

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T27671 1668-1675 Gene_expression denotes express
T27670 1581-1590 Positive_regulation denotes induction
T27669 1605-1615 Gene_expression denotes expression
T27668 1421-1431 Transcription denotes expression
T27667 1450-1459 Positive_regulation denotes increased
T27666 1168-1176 Positive_regulation denotes enhances
T27665 1188-1197 Transcription denotes synthesis
T27664 1135-1145 Binding denotes Engagement
T27663 1100-1110 Gene_expression denotes expression
T27662 1081-1090 Positive_regulation denotes induction
T27661 2969-2974 Protein denotes TRAF6
T27660 2959-2964 Protein denotes IRAK1
T27659 2925-2929 Protein denotes CD86
T27658 2917-2920 Protein denotes TNF
T27657 2898-2903 Protein denotes shRNA
T27656 2832-2837 Protein denotes TRAF6
T27655 2819-2824 Protein denotes IRAK1
T27654 2730-2735 Protein denotes NFAT5
T27653 2587-2592 Protein denotes shRNA
T27652 2479-2484 Protein denotes TRAF6
T27651 2469-2474 Protein denotes IRAK1
T27650 2364-2369 Protein denotes NFAT5
T27649 2324-2329 Protein denotes TRAF6
T27648 2314-2319 Protein denotes IRAK1
T27647 2210-2215 Protein denotes MyD88
T27646 2170-2174 Protein denotes CD86
T27645 2162-2165 Protein denotes TNF
T27644 2011-2016 Protein denotes MyD88
T27643 1935-1940 Protein denotes NFAT5
T27642 1748-1751 Protein denotes GFP
T27641 1715-1720 Protein denotes MyD88
T27640 1594-1599 Protein denotes NFAT5
T27639 1554-1559 Protein denotes MyD88
T27638 1410-1415 Protein denotes NFAT5
T27637 1377-1382 Protein denotes NFAT5
T27636 1248-1252 Protein denotes TLR2
T27635 1177-1182 Protein denotes NFAT5
T15843 4002-4011 Negative_regulation denotes inhibited
T15842 4012-4023 Positive_regulation denotes MTb-induced
T15841 4061-4067 Regulation denotes impact
T15840 3970-3979 Negative_regulation denotes knockdown
T15839 3913-3924 Regulation denotes independent
T15838 3768-3777 Positive_regulation denotes dependent
T15837 3650-3659 Negative_regulation denotes knockdown
T15836 3517-3524 Negative_regulation denotes reduced
T15835 3242-3251 Positive_regulation denotes induction
T15834 3331-3340 Gene_expression denotes expresses
T15833 3266-3276 Gene_expression denotes expression
T15832 3224-3233 Positive_regulation denotes important
T15831 3115-3123 Binding denotes ligation
T15830 934-940 Regulation denotes effect
T15829 756-764 Positive_regulation denotes enhanced
T15828 955-965 Gene_expression denotes expression
T15827 540-549 Positive_regulation denotes increased
T15826 391-400 Positive_regulation denotes enhancing
T15825 379-387 Binding denotes ligation
T15824 321-331 Gene_expression denotes expression
T15821 5189-5194 Protein denotes TRAF6
T15820 5179-5184 Protein denotes IRAK1
T15819 5144-5149 Protein denotes MyD88
T15818 5130-5135 Protein denotes MyD88
T15817 5060-5065 Protein denotes NFAT5
T15816 4924-4929 Protein denotes MyD88
T15815 4903-4908 Protein denotes TRAF6
T15814 4892-4897 Protein denotes IRAK1
T15813 4873-4877 Protein denotes CD86
T15812 4839-4843 Protein denotes CD86
T15811 4795-4800 Protein denotes TRAF6
T15810 4785-4790 Protein denotes IRAK1
T15809 4752-4757 Protein denotes MyD88
T15808 4713-4717 Protein denotes CD86
T15784 3644-3649 Protein denotes MyD88
T15783 3610-3619 Protein denotes GFP shRNA
T15782 3446-3451 Protein denotes MyD88
T15781 3398-3403 Protein denotes MyD88
T15780 3366-3387 Protein denotes short hairpin (sh)RNA
T15779 3255-3260 Protein denotes NFAT5
T15778 3110-3114 Protein denotes TLR2
T15777 3081-3086 Protein denotes MyD88
T15776 765-770 Protein denotes NFAT5
T15775 944-949 Protein denotes NFAT5
T15774 503-508 Protein denotes NFAT5
T15773 459-463 Protein denotes TLR2
T15772 401-406 Protein denotes NFAT5
T15771 374-378 Protein denotes TLR2
T15770 310-315 Protein denotes NFAT5
T15769 132-137 Protein denotes NFAT5
T15768 42-47 Protein denotes MyD88
T15807 4633-4636 Protein denotes TNF
T15806 4624-4629 Protein denotes TRAF6
T15805 4614-4619 Protein denotes IRAK1
T15804 4519-4522 Protein denotes TNF
T15803 4475-4480 Protein denotes NFAT5
T15802 4433-4438 Protein denotes TRAF6
T15801 4423-4428 Protein denotes IRAK1
T15800 4367-4372 Protein denotes MyD88
T15799 4322-4327 Protein denotes TRAF6
T15798 4313-4318 Protein denotes IRAK1
T15797 4204-4209 Protein denotes NFAT5
T15796 4137-4142 Protein denotes MyD88
T15795 4113-4118 Protein denotes NFAT5
T15794 4071-4075 Protein denotes CD86
T15793 4034-4037 Protein denotes TNF
T15792 4024-4029 Protein denotes NFAT5
T15791 3983-3988 Protein denotes MyD88
T15790 3930-3934 Protein denotes CD86
T15789 3907-3912 Protein denotes MyD88
T15788 3835-3838 Protein denotes TNF
T15787 3762-3767 Protein denotes MyD88
T15786 3753-3756 Protein denotes TNF
T15785 3714-3719 Protein denotes NFAT5
T15869 5071-5081 Gene_expression denotes expression
T15868 5044-5056 Positive_regulation denotes upregulation
T15867 5150-5160 Binding denotes associated
T15866 5116-5126 Positive_regulation denotes activation
T15865 5107-5115 Positive_regulation denotes requires
T15864 4723-4733 Gene_expression denotes expression
T15863 4806-4816 Gene_expression denotes expression
T15862 4878-4888 Gene_expression denotes expression
T15861 4831-4838 Negative_regulation denotes reduced
T15860 4742-4748 Positive_regulation denotes depend
T15859 4771-4781 Negative_regulation denotes abrogation
T15858 4909-4918 Positive_regulation denotes dependent
T15857 4642-4652 Gene_expression denotes expression
T15856 4528-4538 Gene_expression denotes expression
T15855 4562-4569 Negative_regulation denotes reduced
T15854 4507-4518 Positive_regulation denotes MTb-induced
T15853 4467-4474 Positive_regulation denotes induced
T15852 4405-4414 Negative_regulation denotes knockdown
T15851 4453-4462 Negative_regulation denotes inhibited
T15850 4188-4200 Positive_regulation denotes upregulation
T15849 4303-4312 Binding denotes targeting
T15848 4210-4223 Transcription denotes transcription
T15847 4174-4183 Positive_regulation denotes mediating
T15846 4099-4109 Regulation denotes regulation
T15845 4122-4131 Positive_regulation denotes dependent
T15844 4043-4049 Transcription denotes levels
T27634 1149-1153 Protein denotes TLR2
T27633 1094-1099 Protein denotes NFAT5
T27632 1027-1032 Protein denotes MyD88
T27684 2981-2988 Positive_regulation denotes induced
T27683 2951-2958 Positive_regulation denotes require
T27682 2801-2811 Gene_expression denotes expressing
T27681 2736-2746 Gene_expression denotes expression
T27680 2879-2889 Gene_expression denotes expressing
T27679 2765-2774 Negative_regulation denotes inhibited
T27678 2568-2578 Gene_expression denotes expressing
T27677 2438-2445 Gene_expression denotes express
T27676 2351-2360 Positive_regulation denotes induction
T27675 2375-2385 Gene_expression denotes expression
T27674 2334-2342 Positive_regulation denotes required
T27673 2186-2196 Gene_expression denotes expression
T27672 1972-1981 Negative_regulation denotes inhibited
R11604 T15770 T15824 themeOf NFAT5,expression
R11605 T15771 T15825 themeOf TLR2,ligation
R11606 T15772 T15826 themeOf NFAT5,enhancing
R11607 T15774 T15827 themeOf NFAT5,increased
R11608 T15775 T15828 themeOf NFAT5,expression
R11609 T15776 T15829 themeOf NFAT5,enhanced
R11610 T15778 T15831 themeOf TLR2,ligation
R11611 T15779 T15833 themeOf NFAT5,expression
R11612 T15781 T15834 themeOf MyD88,expresses
R11613 T15782 T15836 themeOf MyD88,reduced
R11614 T15784 T15837 themeOf MyD88,knockdown
R11615 T15786 T15838 themeOf TNF,dependent
R11616 T15787 T15838 causeOf MyD88,dependent
R11617 T15789 T15839 themeOf MyD88,independent
R11618 T15791 T15840 themeOf MyD88,knockdown
R11619 T15792 T15843 themeOf NFAT5,inhibited
R11620 T15792 T15842 themeOf NFAT5,MTb-induced
R11621 T15793 T15843 themeOf TNF,inhibited
R11622 T15793 T15844 themeOf TNF,levels
R11623 T15794 T15841 themeOf CD86,impact
R11624 T15795 T15846 themeOf NFAT5,regulation
R11625 T15797 T15848 themeOf NFAT5,transcription
R11626 T15798 T15849 themeOf IRAK1,targeting
R11627 T15799 T15849 themeOf TRAF6,targeting
R11628 T15801 T15852 themeOf IRAK1,knockdown
R11629 T15802 T15852 themeOf TRAF6,knockdown
R11630 T15803 T15851 themeOf NFAT5,inhibited
R11631 T15803 T15851 themeOf NFAT5,inhibited
R11632 T15803 T15853 themeOf NFAT5,induced
R11633 T15804 T15856 themeOf TNF,expression
R11634 T15807 T15857 themeOf TNF,expression
R11635 T15808 T15864 themeOf CD86,expression
R11636 T15809 T15860 themeOf MyD88,depend
R11637 T15810 T15863 themeOf IRAK1,expression
R11638 T15811 T15863 themeOf TRAF6,expression
R11639 T15812 T15861 themeOf CD86,reduced
R11640 T15813 T15862 themeOf CD86,expression
R11641 T15815 T15858 causeOf TRAF6,dependent
R11642 T15817 T15869 themeOf NFAT5,expression
R11643 T15818 T15866 themeOf MyD88,activation
R11644 T15819 T15867 themeOf MyD88,associated
R11646 T15828 T15830 themeOf expression,effect
R11647 T15833 T15835 themeOf expression,induction
R11648 T15835 T15832 themeOf induction,important
R11649 T15840 T15843 causeOf knockdown,inhibited
R11650 T15840 T15843 causeOf knockdown,inhibited
R11651 T15840 T15843 causeOf knockdown,inhibited
R11652 T15842 T15843 themeOf MTb-induced,inhibited
R11653 T15846 T15845 themeOf regulation,dependent
R11654 T15848 T15850 themeOf transcription,upregulation
R11655 T15850 T15847 themeOf upregulation,mediating
R11656 T15852 T15851 causeOf knockdown,inhibited
R11657 T15852 T15851 causeOf knockdown,inhibited
R11658 T15852 T15851 causeOf knockdown,inhibited
R11659 T15852 T15851 causeOf knockdown,inhibited
R11660 T15853 T15851 themeOf induced,inhibited
R11661 T15853 T15851 themeOf induced,inhibited
R11662 T15856 T15855 themeOf expression,reduced
R11663 T15856 T15854 themeOf expression,MTb-induced
R11664 T15862 T15858 themeOf expression,dependent
R11665 T15863 T15859 themeOf expression,abrogation
R11666 T15863 T15859 themeOf expression,abrogation
R11667 T15864 T15860 themeOf expression,depend
R11668 T15866 T15865 themeOf activation,requires
R11669 T15869 T15868 themeOf expression,upregulation
R20088 T27633 T27663 themeOf NFAT5,expression
R20089 T27634 T27664 themeOf TLR2,Engagement
R20090 T27635 T27665 themeOf NFAT5,synthesis
R20091 T27638 T27668 themeOf NFAT5,expression
R20092 T27640 T27669 themeOf NFAT5,expression
R20093 T27641 T27671 themeOf MyD88,express
R20094 T27642 T27671 themeOf GFP,express
R20095 T27643 T27672 themeOf NFAT5,inhibited
R20096 T27645 T27673 themeOf TNF,expression
R20097 T27646 T27673 themeOf CD86,expression
R20098 T27648 T27674 causeOf IRAK1,required
R20099 T27649 T27674 causeOf TRAF6,required
R20100 T27650 T27675 themeOf NFAT5,expression
R20101 T27651 T27677 themeOf IRAK1,express
R20102 T27653 T27678 themeOf shRNA,expressing
R20103 T27654 T27681 themeOf NFAT5,expression
R20104 T27655 T27682 themeOf IRAK1,expressing
R20105 T27656 T27682 themeOf TRAF6,expressing
R20106 T27657 T27680 themeOf shRNA,expressing
R20107 T27658 T27684 themeOf TNF,induced
R20108 T27660 T27683 themeOf IRAK1,require
R20109 T27660 T27684 themeOf IRAK1,induced
R20110 T27663 T27662 themeOf expression,induction
R20111 T27665 T27666 themeOf synthesis,enhances
R20112 T27668 T27667 themeOf expression,increased
R20113 T27669 T27670 themeOf expression,induction
R20114 T27675 T27676 themeOf expression,induction
R20115 T27676 T27674 themeOf induction,required
R20116 T27676 T27674 themeOf induction,required
R20117 T27681 T27679 themeOf expression,inhibited

DLUT931

Id Subject Object Predicate Lexical cue
T27553 2469-2474 Protein denotes IRAK1
T27552 2364-2369 Protein denotes NFAT5
T27551 2324-2329 Protein denotes TRAF6
T27550 2314-2319 Protein denotes IRAK1
T27549 2210-2215 Protein denotes MyD88
T27548 2170-2174 Protein denotes CD86
T27547 2162-2165 Protein denotes TNF
T27546 2011-2016 Protein denotes MyD88
T27545 1935-1940 Protein denotes NFAT5
T27544 1748-1751 Protein denotes GFP
T27543 1715-1720 Protein denotes MyD88
T27542 1594-1599 Protein denotes NFAT5
T27541 1554-1559 Protein denotes MyD88
T27540 1410-1415 Protein denotes NFAT5
T27539 1377-1382 Protein denotes NFAT5
T27538 1248-1252 Protein denotes TLR2
T27537 1177-1182 Protein denotes NFAT5
T27536 1149-1153 Protein denotes TLR2
T27535 1094-1099 Protein denotes NFAT5
T27534 1027-1032 Protein denotes MyD88
T15716 540-549 Positive_regulation denotes increased
T15715 514-520 Transcription denotes levels
T15714 391-400 Positive_regulation denotes enhancing
T15713 359-370 Positive_regulation denotes requirement
T15712 412-418 Transcription denotes levels
T15711 379-387 Binding denotes ligation
T15710 278-286 Positive_regulation denotes required
T15709 321-331 Gene_expression denotes expression
T15706 5189-5194 Protein denotes TRAF6
T15705 5179-5184 Protein denotes IRAK1
T15704 5144-5149 Protein denotes MyD88
T15703 5130-5135 Protein denotes MyD88
T15702 5060-5065 Protein denotes NFAT5
T15701 4924-4929 Protein denotes MyD88
T15700 4903-4908 Protein denotes TRAF6
T15699 4892-4897 Protein denotes IRAK1
T15698 4873-4877 Protein denotes CD86
T15697 4839-4843 Protein denotes CD86
T15696 4795-4800 Protein denotes TRAF6
T15695 4785-4790 Protein denotes IRAK1
T15694 4752-4757 Protein denotes MyD88
T15693 4713-4717 Protein denotes CD86
T15692 4633-4636 Protein denotes TNF
T15691 4624-4629 Protein denotes TRAF6
T15690 4614-4619 Protein denotes IRAK1
T15689 4519-4522 Protein denotes TNF
T15688 4475-4480 Protein denotes NFAT5
T15687 4433-4438 Protein denotes TRAF6
T15686 4423-4428 Protein denotes IRAK1
T15685 4367-4372 Protein denotes MyD88
T15684 4322-4327 Protein denotes TRAF6
T15683 4313-4318 Protein denotes IRAK1
T15682 4204-4209 Protein denotes NFAT5
T15681 4137-4142 Protein denotes MyD88
T15680 4113-4118 Protein denotes NFAT5
T15679 4071-4075 Protein denotes CD86
T15678 4034-4037 Protein denotes TNF
T15677 4024-4029 Protein denotes NFAT5
T15676 3983-3988 Protein denotes MyD88
T15675 3930-3934 Protein denotes CD86
T15674 3907-3912 Protein denotes MyD88
T15673 3835-3838 Protein denotes TNF
T15672 3762-3767 Protein denotes MyD88
T15671 3753-3756 Protein denotes TNF
T15670 3714-3719 Protein denotes NFAT5
T15669 3644-3649 Protein denotes MyD88
T15668 3610-3619 Protein denotes GFP shRNA
T15667 3446-3451 Protein denotes MyD88
T15666 3398-3403 Protein denotes MyD88
T15665 3366-3387 Protein denotes short hairpin (sh)RNA
T15664 3255-3260 Protein denotes NFAT5
T15663 3110-3114 Protein denotes TLR2
T15662 3081-3086 Protein denotes MyD88
T15661 765-770 Protein denotes NFAT5
T15660 944-949 Protein denotes NFAT5
T15659 503-508 Protein denotes NFAT5
T15658 459-463 Protein denotes TLR2
T15657 401-406 Protein denotes NFAT5
T15656 374-378 Protein denotes TLR2
T15655 310-315 Protein denotes NFAT5
T15654 132-137 Protein denotes NFAT5
T15653 42-47 Protein denotes MyD88
T15766 5107-5115 Positive_regulation denotes requires
T15765 5044-5056 Positive_regulation denotes upregulation
T15764 5150-5160 Binding denotes associated
T15763 5116-5126 Positive_regulation denotes activation
T15762 5071-5081 Gene_expression denotes expression
T15761 4831-4838 Negative_regulation denotes reduced
T15760 4771-4781 Negative_regulation denotes abrogation
T15759 4930-4941 Regulation denotes independent
T15758 4909-4918 Positive_regulation denotes dependent
T15757 4878-4888 Gene_expression denotes expression
T15756 4849-4855 Transcription denotes levels
T15755 4806-4816 Gene_expression denotes expression
T15754 4742-4748 Regulation denotes depend
T15753 4723-4733 Gene_expression denotes expression
T15752 4605-4609 Positive_regulation denotes role
T15751 4562-4569 Negative_regulation denotes reduced
T15750 4507-4518 Positive_regulation denotes MTb-induced
T15749 4642-4652 Gene_expression denotes expression
T15748 4528-4538 Gene_expression denotes expression
T15747 4467-4474 Positive_regulation denotes induced
T15746 4453-4462 Negative_regulation denotes inhibited
T15745 4486-4492 Transcription denotes levels
T15744 4405-4414 Negative_regulation denotes knockdown
T15743 4174-4183 Positive_regulation denotes mediating
T15742 4188-4200 Positive_regulation denotes upregulation
T15741 4303-4312 Negative_regulation denotes targeting
T15740 4210-4223 Transcription denotes transcription
T15739 4122-4131 Positive_regulation denotes dependent
T15738 4099-4109 Regulation denotes regulation
T15737 4061-4067 Regulation denotes impact
T15736 4002-4011 Negative_regulation denotes inhibited
T15735 4081-4087 Transcription denotes levels
T15734 4043-4049 Transcription denotes levels
T15733 4012-4023 Positive_regulation denotes MTb-induced
T15732 3970-3979 Negative_regulation denotes knockdown
T15731 3893-3899 Transcription denotes levels
T15730 3768-3777 Regulation denotes dependent
T15729 3725-3731 Transcription denotes levels
T15728 3650-3659 Negative_regulation denotes knockdown
T15727 3591-3601 Gene_expression denotes expressing
T15726 3517-3524 Negative_regulation denotes reduced
T15725 3457-3463 Transcription denotes levels
T15724 3242-3251 Positive_regulation denotes induction
T15723 3331-3340 Gene_expression denotes expresses
T15722 3266-3276 Gene_expression denotes expression
T15721 3115-3123 Binding denotes ligation
T15720 934-940 Regulation denotes effect
T15719 756-764 Positive_regulation denotes enhanced
T15718 955-965 Gene_expression denotes expression
T15717 776-782 Transcription denotes levels
T27566 1135-1145 Binding denotes Engagement
T27565 1081-1090 Positive_regulation denotes induction
T27564 1100-1110 Gene_expression denotes expression
T27563 2969-2974 Protein denotes TRAF6
T27562 2959-2964 Protein denotes IRAK1
T27561 2925-2929 Protein denotes CD86
T27560 2917-2920 Protein denotes TNF
T27559 2898-2903 Protein denotes shRNA
T27558 2832-2837 Protein denotes TRAF6
T27557 2819-2824 Protein denotes IRAK1
T27556 2730-2735 Protein denotes NFAT5
T27555 2587-2592 Protein denotes shRNA
T27554 2479-2484 Protein denotes TRAF6
T27589 2951-2958 Positive_regulation denotes require
T27588 2879-2889 Gene_expression denotes expressing
T27587 2842-2847 Negative_regulation denotes shRNA
T27586 2801-2811 Gene_expression denotes expressing
T27585 2765-2774 Negative_regulation denotes inhibited
T27584 2736-2746 Gene_expression denotes expression
T27583 2568-2578 Gene_expression denotes expressing
T27582 2438-2445 Gene_expression denotes express
T27581 2334-2342 Positive_regulation denotes required
T27580 2351-2360 Positive_regulation denotes induction
T27579 2375-2385 Gene_expression denotes expression
T27578 2216-2225 Regulation denotes dependent
T27577 2186-2196 Gene_expression denotes expression
T27576 1972-1981 Negative_regulation denotes inhibited
T27575 1946-1952 Transcription denotes levels
T27574 1668-1675 Gene_expression denotes express
T27573 1581-1590 Positive_regulation denotes induction
T27572 1605-1615 Gene_expression denotes expression
T27571 1450-1459 Positive_regulation denotes increased
T27570 1421-1431 Transcription denotes expression
T27569 1388-1394 Transcription denotes levels
T27568 1168-1176 Positive_regulation denotes enhances
T27567 1188-1197 Transcription denotes synthesis
R11503 T15656 T15711 themeOf TLR2,ligation
R11504 T15657 T15712 themeOf NFAT5,levels
R11505 T15659 T15715 themeOf NFAT5,levels
R11506 T15660 T15718 themeOf NFAT5,expression
R11507 T15661 T15717 themeOf NFAT5,levels
R11508 T15662 T15721 themeOf MyD88,ligation
R11509 T15663 T15721 themeOf TLR2,ligation
R11510 T15664 T15722 themeOf NFAT5,expression
R11511 T15665 T15723 themeOf short hairpin (sh)RNA,expresses
R11513 T15667 T15725 themeOf MyD88,levels
R11514 T15668 T15727 themeOf GFP shRNA,expressing
R11515 T15669 T15728 themeOf MyD88,knockdown
R11516 T15670 T15729 themeOf NFAT5,levels
R11517 T15671 T15730 themeOf TNF,dependent
R11518 T15672 T15730 causeOf MyD88,dependent
R11519 T15675 T15731 themeOf CD86,levels
R11520 T15676 T15732 themeOf MyD88,knockdown
R11521 T15677 T15733 themeOf NFAT5,MTb-induced
R11522 T15677 T15734 themeOf NFAT5,levels
R11524 T15679 T15735 themeOf CD86,levels
R11525 T15680 T15738 themeOf NFAT5,regulation
R11526 T15681 T15739 causeOf MyD88,dependent
R11527 T15682 T15740 themeOf NFAT5,transcription
R11528 T15683 T15741 themeOf IRAK1,targeting
R11530 T15686 T15744 themeOf IRAK1,knockdown
R11532 T15688 T15745 themeOf NFAT5,levels
R11533 T15689 T15748 themeOf TNF,expression
R11534 T15690 T15752 causeOf IRAK1,role
R11536 T15692 T15749 themeOf TNF,expression
R11537 T15693 T15753 themeOf CD86,expression
R11538 T15694 T15754 causeOf MyD88,depend
R11539 T15695 T15755 themeOf IRAK1,expression
R11541 T15697 T15756 themeOf CD86,levels
R11542 T15698 T15757 themeOf CD86,expression
R11543 T15700 T15758 causeOf TRAF6,dependent
R11544 T15701 T15759 causeOf MyD88,independent
R11545 T15702 T15762 themeOf NFAT5,expression
R11546 T15703 T15763 themeOf MyD88,activation
R11547 T15704 T15764 themeOf MyD88,associated
R11549 T15705 T15764 themeOf IRAK1,associated
R11552 T15709 T15710 themeOf expression,required
R11553 T15711 T15713 themeOf ligation,requirement
R11554 T15712 T15714 themeOf levels,enhancing
R11555 T15714 T15713 themeOf enhancing,requirement
R11556 T15715 T15716 themeOf levels,increased
R11557 T15717 T15719 themeOf levels,enhanced
R11558 T15718 T15720 themeOf expression,effect
R11559 T15722 T15724 themeOf expression,induction
R11560 T15725 T15726 themeOf levels,reduced
R11561 T15732 T15736 causeOf knockdown,inhibited
R11562 T15732 T15737 causeOf knockdown,impact
R11565 T15733 T15736 themeOf MTb-induced,inhibited
R11570 T15735 T15737 themeOf levels,impact
R11571 T15738 T15739 themeOf regulation,dependent
R11572 T15740 T15742 themeOf transcription,upregulation
R11573 T15742 T15743 themeOf upregulation,mediating
R11574 T15744 T15746 causeOf knockdown,inhibited
R11578 T15745 T15746 themeOf levels,inhibited
R11579 T15745 T15747 themeOf levels,induced
R11583 T15748 T15750 themeOf expression,MTb-induced
R11584 T15749 T15752 themeOf expression,role
R11586 T15750 T15751 themeOf MTb-induced,reduced
R11587 T15753 T15754 themeOf expression,depend
R11588 T15755 T15760 themeOf expression,abrogation
R11590 T15756 T15761 themeOf levels,reduced
R11592 T15757 T15758 themeOf expression,dependent
R11593 T15757 T15759 themeOf expression,independent
R11594 T15760 T15761 causeOf abrogation,reduced
R11596 T15762 T15765 themeOf expression,upregulation
R11597 T15763 T15766 themeOf activation,requires
R11600 T15765 T15766 causeOf upregulation,requires
R11502 T15655 T15709 themeOf NFAT5,expression
R11512 T15666 T15723 themeOf MyD88,expresses
R11523 T15678 T15734 themeOf TNF,levels
R11563 T15732 T15736 causeOf knockdown,inhibited
R11566 T15734 T15736 themeOf levels,inhibited
R11567 T15734 T15736 themeOf levels,inhibited
R11529 T15684 T15741 themeOf TRAF6,targeting
R11531 T15687 T15744 themeOf TRAF6,knockdown
R11535 T15691 T15752 causeOf TRAF6,role
R11540 T15696 T15755 themeOf TRAF6,expression
R11548 T15704 T15764 themeOf MyD88,associated
R11550 T15706 T15764 themeOf TRAF6,associated
R11564 T15732 T15736 causeOf knockdown,inhibited
R11568 T15734 T15733 themeOf levels,MTb-induced
R11569 T15734 T15733 themeOf levels,MTb-induced
R11575 T15744 T15746 causeOf knockdown,inhibited
R11576 T15744 T15746 causeOf knockdown,inhibited
R11577 T15744 T15746 causeOf knockdown,inhibited
R11580 T15745 T15746 themeOf levels,inhibited
R11581 T15747 T15746 themeOf induced,inhibited
R11582 T15747 T15746 themeOf induced,inhibited
R11585 T15749 T15752 themeOf expression,role
R11589 T15755 T15760 themeOf expression,abrogation
R11591 T15756 T15761 themeOf levels,reduced
R11595 T15760 T15761 causeOf abrogation,reduced
R11598 T15764 T15766 themeOf associated,requires
R11599 T15764 T15766 themeOf associated,requires
R11601 T15765 T15766 causeOf upregulation,requires
R11602 T15765 T15766 causeOf upregulation,requires
R20036 T27535 T27564 themeOf NFAT5,expression
R20037 T27536 T27566 themeOf TLR2,Engagement
R20038 T27537 T27567 themeOf NFAT5,synthesis
R20039 T27539 T27569 themeOf NFAT5,levels
R20040 T27540 T27570 themeOf NFAT5,expression
R20041 T27542 T27572 themeOf NFAT5,expression
R20042 T27543 T27574 themeOf MyD88,express
R20043 T27544 T27574 themeOf GFP,express
R20044 T27545 T27575 themeOf NFAT5,levels
R20045 T27547 T27577 themeOf TNF,expression
R20046 T27548 T27577 themeOf CD86,expression
R20047 T27549 T27578 causeOf MyD88,dependent
R20049 T27550 T27581 causeOf IRAK1,required
R20051 T27552 T27579 themeOf NFAT5,expression
R20052 T27553 T27582 themeOf IRAK1,express
R20053 T27555 T27583 themeOf shRNA,expressing
R20054 T27556 T27584 themeOf NFAT5,expression
R20055 T27557 T27586 themeOf IRAK1,expressing
R20056 T27558 T27587 themeOf TRAF6,shRNA
R20058 T27559 T27588 themeOf shRNA,expressing
R20059 T27562 T27589 themeOf IRAK1,require
R20061 T27564 T27565 themeOf expression,induction
R20062 T27566 T27568 causeOf Engagement,enhances
R20063 T27567 T27568 themeOf synthesis,enhances
R20064 T27570 T27571 themeOf expression,increased
R20065 T27572 T27573 themeOf expression,induction
R20066 T27575 T27576 themeOf levels,inhibited
R20067 T27577 T27578 themeOf expression,dependent
R20068 T27577 T27578 themeOf expression,dependent
R20069 T27579 T27580 themeOf expression,induction
R20070 T27580 T27581 themeOf induction,required
R20072 T27584 T27585 themeOf expression,inhibited
R20048 T27549 T27578 causeOf MyD88,dependent
R20050 T27551 T27581 causeOf TRAF6,required
R20057 T27558 T27586 themeOf TRAF6,expressing
R20060 T27563 T27589 themeOf TRAF6,require
R20071 T27580 T27581 themeOf induction,required

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue Speculation
T28331 2144-2160 Regulation denotes of MTb infection
T28330 1591-1615 Gene_expression denotes of NFAT5 gene expression
T28329 1091-1110 Gene_expression denotes of NFAT5 expression
T28328 2556-2592 Transcription denotes THP-1 cells expressing control shRNA
T28327 2556-2592 Gene_expression denotes THP-1 cells expressing control shRNA
T28326 1636-1751 Gene_expression denotes THP-1 cells that constitutively express lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP
T28325 1636-1751 Transcription denotes THP-1 cells that constitutively express lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP
T28324 1410-1431 Gene_expression denotes NFAT5 mRNA expression
T28323 2361-2385 Gene_expression denotes of NFAT5 gene expression
T28322 1410-1502 Positive_regulation denotes NFAT5 mRNA expression was significantly increased when the cells were incubated with Pam3Cys
T28321 2989-3006 Positive_regulation denotes by PRR activation
T28320 2406-2499 Gene_expression denotes THP-1 cells that constitutively express lentivirally-delivered IRAK1- or TRAF6-specific shRNA
T28319 2406-2499 Gene_expression denotes THP-1 cells that constitutively express lentivirally-delivered IRAK1- or TRAF6-specific shRNA
T28318 2406-2499 Transcription denotes THP-1 cells that constitutively express lentivirally-delivered IRAK1- or TRAF6-specific shRNA
T28317 2730-2841 Negative_regulation denotes NFAT5 expression was significantly inhibited in the MTb-infected cells expressing either IRAK1 (C) or TRAF6 (D)
T28316 2265-2279 Regulation denotes MTb infection,
T28315 2730-2746 Gene_expression denotes NFAT5 expression
T28314 2265-2268 Protein denotes MTb
T28313 2324-2329 Protein denotes TRAF6
T28312 1935-1952 Protein denotes NFAT5 mRNA levels
T28311 1507-1508 Entity denotes p
T28310 1027-1041 Protein denotes MyD88-mediated
T28309 1120-1129 Entity denotes monocytes
T28308 2011-2044 Protein denotes MyD88-specific shRNA (black bars)
T28307 1619-1634 Entity denotes human monocytes
T28306 2446-2475 Protein denotes lentivirally-delivered IRAK1-
T28305 2479-2493 Protein denotes TRAF6-specific
T28304 2832-2837 Protein denotes TRAF6
T28303 2648-2651 Protein denotes MTb
T28302 1853-1870 Entity denotes 1∶1 cells∶bacilli
T28301 2623-2628 Entity denotes Cells
T28300 1149-1153 Protein denotes TLR2
T28299 2917-2920 Protein denotes TNF
T28298 2093-2110 Protein denotes shRNA (open bars)
T28297 1917-1920 Protein denotes RNA
T28296 1377-1382 Protein denotes NFAT5
T28295 1676-1751 Protein denotes lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP
T28294 1262-1268 Entity denotes ligand
T28293 1077-1080 Protein denotes MTb
T28292 1833-1836 Protein denotes MTb
T28291 1410-1415 Protein denotes NFAT5
T28290 2712-2715 Protein denotes RNA
T28289 1715-1751 Protein denotes MyD88 or control shRNA targeting GFP
T28288 2162-2181 Protein denotes TNF and CD86 mRNAs,
T28287 2969-2974 Protein denotes TRAF6
T28286 1094-1099 Protein denotes NFAT5
T28285 1636-1751 Entity denotes THP-1 cells that constitutively express lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP
T28284 1541-1542 Entity denotes p
T28283 2917-2935 Protein denotes TNF and CD86 mRNAs
T28282 2870-2878 Entity denotes to cells
T28281 2556-2592 Entity denotes THP-1 cells expressing control shRNA
T28280 2011-2025 Protein denotes MyD88-specific
T28279 2389-2404 Entity denotes human monocytes
T28278 2364-2369 Protein denotes NFAT5
T28277 1465-1474 Entity denotes the cells
T28276 1248-1261 Protein denotes TLR2-specific
T28275 2406-2499 Entity denotes THP-1 cells that constitutively express lentivirally-delivered IRAK1- or TRAF6-specific shRNA
T28274 2925-2929 Protein denotes CD86
T28273 2730-2735 Protein denotes NFAT5
T28272 1808-1813 Entity denotes Cells
T28271 1532-1535 Protein denotes MTb
T28270 2898-2903 Protein denotes shRNA
T28269 1748-1751 Protein denotes GFP
T28268 2054-2092 Entity denotes with the cells transduced with control
T28267 2162-2165 Protein denotes TNF
T28266 2992-2995 Protein denotes PRR
T28265 1985-2092 Entity denotes the cells transduced with MyD88-specific shRNA (black bars) compared with the cells transduced with control
T28264 2170-2174 Protein denotes CD86
T28263 2819-2828 Protein denotes IRAK1 (C)
T28262 2778-2841 Protein denotes the MTb-infected cells expressing either IRAK1 (C) or TRAF6 (D)
T28261 1577-1580 Protein denotes MTb
T28260 1410-1420 Protein denotes NFAT5 mRNA
T28259 2842-2847 Protein denotes shRNA
T28258 1715-1720 Protein denotes MyD88
T28257 1302-1305 Protein denotes MTb
T28256 1941-1945 Protein denotes mRNA
T28255 2147-2150 Protein denotes MTb
T28254 1594-1599 Protein denotes NFAT5
T28253 2959-2964 Protein denotes IRAK1
T28252 2347-2350 Protein denotes MTb
T28251 2314-2319 Protein denotes IRAK1
T28250 1177-1182 Protein denotes NFAT5
T28249 2210-2225 Protein denotes MyD88-dependent
T28248 2579-2592 Protein denotes control shRNA
T28247 1201-1210 Entity denotes monocytes
T28246 2479-2499 Protein denotes TRAF6-specific shRNA
T28245 1554-1559 Protein denotes MyD88
T28244 1177-1197 Protein denotes NFAT5 mRNA synthesis
T16917 4439-4466 Negative_regulation denotes significantly inhibited MTb
T16916 4713-4733 Gene_expression denotes CD86 gene expression
T16915 941-977 Gene_expression denotes on NFAT5 gene expression (Figure 7A)
T16914 840-905 Positive_regulation denotes that additional PRRs may be triggered during actual MTb infection true
T16913 4771-4790 Negative_regulation denotes abrogation of IRAK1
T16912 742-755 Regulation denotes MTb infection
T16911 5116-5135 Positive_regulation denotes activation of MyD88
T16910 4204-4223 Transcription denotes NFAT5 transcription
T16909 4991-5081 Positive_regulation denotes together, these results clearly demonstrate that MTb upregulation of NFAT5 gene expression
T16908 4507-4538 Gene_expression denotes MTb-induced TNF gene expression
T16907 4713-4770 Regulation denotes CD86 gene expression did not depend on MyD88 (Figure 7B),
T16906 4162-4224 Regulation denotes the pathway mediating MTb upregulation of NFAT5 transcription,
T16905 4795-4816 Gene_expression denotes TRAF6 gene expression
T16904 307-331 Gene_expression denotes of NFAT5 gene expression
T16903 291-331 Positive_regulation denotes MTb stimulation of NFAT5 gene expression
T16902 885-905 Regulation denotes actual MTb infection
T16901 4666-4679 Regulation denotes MTb infection
T16900 590-616 Positive_regulation denotes to mock-stimulated control
T16899 4095-4142 Regulation denotes MTb regulation of NFAT5 is dependent upon MyD88
T16898 4873-4888 Gene_expression denotes CD86 expression
T16897 4058-4080 Regulation denotes no impact on CD86 mRNA
T16895 4614-4652 Gene_expression denotes IRAK1 and TRAF6 in TNF gene expression
T16894 4184-4223 Positive_regulation denotes MTb upregulation of NFAT5 transcription
T16893 5057-5081 Gene_expression denotes of NFAT5 gene expression
T16892 4095-4118 Regulation denotes MTb regulation of NFAT5
T16891 3252-3276 Gene_expression denotes of NFAT5 gene expression
T16890 4795-4800 Protein denotes TRAF6
T16889 401-406 Protein denotes NFAT5
T16888 3110-3114 Protein denotes TLR2
T16887 3550-3572 Entity denotes THP-1 cells transduced
T16886 4423-4428 Protein denotes IRAK1
T16885 4958-4983 Entity denotes monocytes (Figures 7C–7D)
T16884 3714-3719 Protein denotes NFAT5
T16883 503-508 Protein denotes NFAT5
T16882 742-745 Protein denotes MTb
T16881 5127-5135 Protein denotes of MyD88
T16880 4367-4372 Protein denotes MyD88
T16879 401-418 Protein denotes NFAT5 mRNA levels
T16878 3060-3086 Entity denotes The adaptor molecule MyD88
T16877 3714-3731 Protein denotes NFAT5 mRNA levels
T16876 42-57 Protein denotes MyD88-dependent
T16875 4519-4522 Protein denotes TNF
T16874 149-160 Protein denotes MTb-induced
T16873 97-178 Protein denotes the cellular mechanisms underlying NFAT5-dependent, MTb-induced HIV-1 replication
T16872 5169-5178 Entity denotes molecules
T16871 4666-4669 Protein denotes MTb
T16870 4132-4142 Protein denotes upon MyD88
T16869 4903-4919 Protein denotes TRAF6-dependent,
T16868 4475-4492 Protein denotes NFAT5 mRNA levels
T16867 3644-3649 Protein denotes MyD88
T16866 4507-4518 Protein denotes MTb-induced
T16865 4475-4480 Protein denotes NFAT5
T16864 4110-4118 Protein denotes of NFAT5
T16863 3160-3172 Protein denotes this protein
T16862 4624-4636 Protein denotes TRAF6 in TNF
T16861 3760-3799 Protein denotes a MyD88-dependent gene [21], [54], [55]
T16860 310-315 Protein denotes NFAT5
T16859 473-480 Entity denotes agonist
T16858 374-378 Protein denotes TLR2
T16857 5040-5043 Protein denotes MTb
T16856 3762-3777 Protein denotes MyD88-dependent
T16855 4071-4075 Protein denotes CD86
T16854 3415-3418 Protein denotes PCR
T16853 4068-4080 Protein denotes on CD86 mRNA
T16852 3980-3988 Protein denotes of MyD88
T16851 3398-3403 Protein denotes MyD88
T16850 3238-3241 Protein denotes MTb
T16849 4892-4898 Protein denotes IRAK1-
T16847 240-249 Entity denotes molecules
T16846 5060-5065 Protein denotes NFAT5
T16845 3341-3403 Protein denotes a lentivirally-delivered short hairpin (sh)RNA targeting MyD88
T16844 4839-4848 Protein denotes CD86 mRNA
T16843 765-782 Protein denotes NFAT5 mRNA levels
T16842 4782-4790 Protein denotes of IRAK1
T16841 4184-4187 Protein denotes MTb
T16840 5179-5184 Protein denotes IRAK1
T16839 4204-4209 Protein denotes NFAT5
T16838 771-775 Protein denotes mRNA
T16837 5189-5194 Protein denotes TRAF6
T16836 3467-3478 Entity denotes these cells
T16835 845-860 Protein denotes additional PRRs
T16834 4245-4327 Entity denotes THP-1 cells transduced with lentivirally-delivered shRNAs targeting IRAK1 or TRAF6
T16833 4313-4318 Protein denotes IRAK1
T16831 553-556 Protein denotes Pam
T16830 4095-4098 Protein denotes MTb
T16829 4713-4717 Protein denotes CD86
T16828 3441-3456 Protein denotes that MyD88 mRNA
T16827 4439-4466 Protein denotes significantly inhibited MTb
T16826 3835-3838 Protein denotes TNF
T16825 944-949 Protein denotes NFAT5
T16824 4343-4352 Entity denotes molecules
T16823 3255-3260 Protein denotes NFAT5
T16822 4034-4037 Protein denotes TNF
T16821 3610-3636 Protein denotes GFP shRNA (data not shown)
T16820 4024-4029 Protein denotes NFAT5
T16819 291-294 Protein denotes MTb
T16818 4749-4770 Protein denotes on MyD88 (Figure 7B),
T16817 3060-3086 Protein denotes The adaptor molecule MyD88
T16816 892-895 Protein denotes MTb
T16815 3446-3451 Protein denotes MyD88
T16814 4322-4327 Protein denotes TRAF6
T16813 4034-4042 Protein denotes TNF mRNA
T16812 5140-5149 Protein denotes the MyD88
T16811 455-472 Protein denotes the TLR2-specific
T16810 5101-5106 Entity denotes cells
T16809 4614-4619 Protein denotes IRAK1
T16808 3903-3945 Protein denotes the MyD88-independent gene CD86 [55], [56]
T16807 3903-3945 Protein denotes the MyD88-independent gene CD86 [55], [56]
T16806 4614-4641 Protein denotes IRAK1 and TRAF6 in TNF gene
T16805 4873-4877 Protein denotes CD86
T16804 3907-3924 Protein denotes MyD88-independent
T16803 3638-3671 Entity denotes These MyD88 knockdown THP-1 cells
T16802 3753-3756 Protein denotes TNF
T16801 4633-4636 Protein denotes TNF
T16800 3696-3709 Protein denotes MTb (CDC1551)
T16799 4433-4438 Protein denotes TRAF6
T16798 4945-4948 Protein denotes MTb
T16797 4012-4023 Protein denotes MTb-induced
T16796 4839-4843 Protein denotes CD86
T16795 617-634 Entity denotes cells (Figure 7A)
R12431 T16805 T16898 themeOf CD86,CD86 expression
R12432 T16806 T16895 themeOf IRAK1 and TRAF6 in TNF gene,IRAK1 and TRAF6 in TNF gene expression
R12433 T16816 T16902 themeOf MTb,actual MTb infection
R12434 T16818 T16907 causeOf "on MyD88 (Figure 7B),","CD86 gene expression did not depend on MyD88 (Figure 7B),"
R12435 T16819 T16903 causeOf MTb,MTb stimulation of NFAT5 gene expression
R12436 T16823 T16891 themeOf NFAT5,of NFAT5 gene expression
R12437 T16825 T16915 themeOf NFAT5,on NFAT5 gene expression (Figure 7A)
R12438 T16827 T16917 themeOf significantly inhibited MTb,significantly inhibited MTb
R12439 T16829 T16916 themeOf CD86,CD86 gene expression
R12440 T16830 T16892 causeOf MTb,MTb regulation of NFAT5
R12441 T16835 T16914 themeOf additional PRRs,that additional PRRs may be triggered during actual MTb infection
R12442 T16839 T16910 themeOf NFAT5,NFAT5 transcription
R12443 T16841 T16894 themeOf MTb,MTb upregulation of NFAT5 transcription
R12444 T16842 T16913 themeOf of IRAK1,abrogation of IRAK1
R12445 T16846 T16893 themeOf NFAT5,of NFAT5 gene expression
R12447 T16853 T16897 themeOf on CD86 mRNA,no impact on CD86 mRNA
R12448 T16857 T16909 causeOf MTb,"together, these results clearly demonstrate that MTb upregulation of NFAT5 gene expression"
R12449 T16860 T16904 themeOf NFAT5,of NFAT5 gene expression
R12450 T16864 T16892 themeOf of NFAT5,MTb regulation of NFAT5
R12451 T16870 T16899 causeOf upon MyD88,MTb regulation of NFAT5 is dependent upon MyD88
R12452 T16871 T16901 themeOf MTb,MTb infection
R12453 T16875 T16908 themeOf TNF,MTb-induced TNF gene expression
R12454 T16881 T16911 themeOf of MyD88,activation of MyD88
R12455 T16882 T16912 themeOf MTb,MTb infection
R12456 T16890 T16905 themeOf TRAF6,TRAF6 gene expression
R12457 T16892 T16899 themeOf MTb regulation of NFAT5,MTb regulation of NFAT5 is dependent upon MyD88
R12458 T16893 T16909 themeOf of NFAT5 gene expression,"together, these results clearly demonstrate that MTb upregulation of NFAT5 gene expression"
R12459 T16894 T16906 themeOf MTb upregulation of NFAT5 transcription,"the pathway mediating MTb upregulation of NFAT5 transcription,"
R12460 T16904 T16903 themeOf of NFAT5 gene expression,MTb stimulation of NFAT5 gene expression
R12461 T16916 T16907 themeOf CD86 gene expression,"CD86 gene expression did not depend on MyD88 (Figure 7B),"
R20606 T28246 T28318 themeOf TRAF6-specific shRNA,THP-1 cells that constitutively express lentivirally-delivered IRAK1- or TRAF6-specific shRNA
R20607 T28246 T28319 themeOf TRAF6-specific shRNA,THP-1 cells that constitutively express lentivirally-delivered IRAK1- or TRAF6-specific shRNA
R20608 T28248 T28327 themeOf control shRNA,THP-1 cells expressing control shRNA
R20609 T28248 T28328 themeOf control shRNA,THP-1 cells expressing control shRNA
R20610 T28254 T28330 themeOf NFAT5,of NFAT5 gene expression
R20611 T28255 T28331 themeOf MTb,of MTb infection
R20612 T28260 T28324 themeOf NFAT5 mRNA,NFAT5 mRNA expression
R20613 T28266 T28321 themeOf PRR,by PRR activation
R20614 T28273 T28315 themeOf NFAT5,NFAT5 expression
R20615 T28278 T28323 themeOf NFAT5,of NFAT5 gene expression
R20616 T28286 T28329 themeOf NFAT5,of NFAT5 expression
R20617 T28295 T28325 themeOf lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP,THP-1 cells that constitutively express lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP
R20618 T28295 T28326 themeOf lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP,THP-1 cells that constitutively express lentivirally-delivered shRNA targeting MyD88 or control shRNA targeting GFP
R20619 T28306 T28320 themeOf lentivirally-delivered IRAK1-,THP-1 cells that constitutively express lentivirally-delivered IRAK1- or TRAF6-specific shRNA
R20620 T28314 T28316 themeOf MTb,"MTb infection,"
R20621 T28315 T28317 themeOf NFAT5 expression,NFAT5 expression was significantly inhibited in the MTb-infected cells expressing either IRAK1 (C) or TRAF6 (D)
R20622 T28324 T28322 themeOf NFAT5 mRNA expression,NFAT5 mRNA expression was significantly increased when the cells were incubated with Pam3Cys

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T28187 3058-3059 . denotes .
T28089 2619-2621 NN denotes 7B
T28088 2616-2618 IN denotes in
T28087 2606-2615 VBN denotes described
T28086 2603-2605 IN denotes as
T28085 2598-2602 VBN denotes used
T28084 2593-2597 VBD denotes were
T28083 2587-2592 NNP denotes shRNA
T28082 2579-2586 NN denotes control
T28081 2568-2578 VBG denotes expressing
T28080 2562-2567 NNS denotes cells
T28079 2556-2561 CD denotes THP-1
T28078 2554-2555 . denotes .
T28077 2547-2554 NNPS denotes Methods
T28076 2543-2546 CC denotes and
T28075 2533-2542 NNPS denotes Materials
T28074 2530-2532 IN denotes in
T28073 2520-2529 VBN denotes described
T28072 2517-2519 IN denotes as
T28071 2505-2516 VBN denotes constructed
T28070 2500-2504 VBD denotes were
T28069 2494-2499 NN denotes shRNA
T28068 2479-2493 JJ denotes TRAF6-specific
T28067 2476-2478 CC denotes or
T28066 2474-2475 : denotes -
T28065 2469-2474 NNP denotes IRAK1
T28064 2446-2468 JJ denotes lentivirally-delivered
T28063 2438-2445 VBP denotes express
T28062 2423-2437 RB denotes constitutively
T28061 2418-2422 WDT denotes that
T28060 2412-2417 NNS denotes cells
T28059 2406-2411 CD denotes THP-1
T28058 2404-2405 . denotes .
T28057 2395-2404 NNS denotes monocytes
T28056 2389-2394 JJ denotes human
T28055 2386-2388 IN denotes in
T28054 2375-2385 NN denotes expression
T28053 2370-2374 NN denotes gene
T28052 2364-2369 CD denotes NFAT5
T28051 2361-2363 IN denotes of
T28050 2351-2360 NN denotes induction
T28049 2347-2350 NNP denotes MTb
T28048 2343-2346 IN denotes for
T28047 2334-2342 VBN denotes required
T28046 2330-2333 VBP denotes are
T28045 2324-2329 NNP denotes TRAF6
T28044 2320-2323 CC denotes and
T28043 2314-2319 NNP denotes IRAK1
T28042 2312-2313 -RRB- denotes )
T28041 2311-2312 NNP denotes D
T28040 2309-2310 , denotes ,
T28039 2308-2309 NNP denotes C
T28038 2307-2308 -LRB- denotes (
T28037 2305-2306 . denotes .
T28036 2297-2305 NNS denotes controls
T28035 2294-2296 IN denotes as
T28034 2285-2293 VBN denotes measured
T28033 2280-2284 VBD denotes were
T28032 2278-2279 , denotes ,
T28031 2269-2278 NN denotes infection
T28030 2265-2268 NNP denotes MTb
T28029 2258-2264 IN denotes during
T28028 2256-2257 , denotes ,
T28027 2244-2256 RB denotes respectively
T28026 2242-2243 , denotes ,
T28025 2231-2242 JJ denotes independent
T28024 2230-2231 : denotes -
T28023 2226-2229 CC denotes and
T28022 2210-2225 JJ denotes MyD88-dependent
T28021 2206-2209 VBP denotes are
T28020 2200-2205 WDT denotes which
T28019 2197-2199 IN denotes of
T28018 2186-2196 NN denotes expression
T28017 2182-2185 DT denotes the
T28016 2180-2181 , denotes ,
T28015 2175-2180 NNP denotes mRNAs
T28014 2170-2174 NNP denotes CD86
T28013 2166-2169 CC denotes and
T28012 2162-2165 NNP denotes TNF
T28011 2160-2161 . denotes .
T28010 2151-2160 NN denotes infection
T28009 2147-2150 NNP denotes MTb
T28008 2144-2146 IN denotes of
T28007 2135-2143 NN denotes presence
T28006 2132-2134 CC denotes or
T28005 2124-2131 NN denotes absence
T28004 2120-2123 DT denotes the
T28003 2118-2119 , denotes ,
T28002 2114-2118 DT denotes both
T28001 2111-2113 IN denotes in
T28000 2109-2110 -RRB- denotes )
T27999 2105-2109 NNS denotes bars
T27998 2100-2104 JJ denotes open
T27997 2099-2100 -LRB- denotes (
T27996 2093-2098 NNP denotes shRNA
T27995 2085-2092 NN denotes control
T27994 2080-2084 IN denotes with
T27993 2069-2079 VBN denotes transduced
T27992 2063-2068 NNS denotes cells
T27991 2059-2062 DT denotes the
T27990 2054-2058 IN denotes with
T27989 2045-2053 VBN denotes compared
T27988 2043-2044 -RRB- denotes )
T27987 2039-2043 NNS denotes bars
T27986 2033-2038 JJ denotes black
T27985 2032-2033 -LRB- denotes (
T27984 2026-2031 NNP denotes shRNA
T27983 2011-2025 JJ denotes MyD88-specific
T27982 2006-2010 IN denotes with
T27981 1995-2005 VBN denotes transduced
T27980 1989-1994 NNS denotes cells
T27979 1985-1988 DT denotes the
T27978 1982-1984 IN denotes in
T27977 1972-1981 VBN denotes inhibited
T27976 1958-1971 RB denotes significantly
T27975 1953-1957 VBD denotes were
T27974 1946-1952 NNS denotes levels
T27973 1941-1945 NNP denotes mRNA
T27972 1935-1940 CD denotes NFAT5
T27971 1933-1934 . denotes .
T27970 1925-1933 VBN denotes analyzed
T27969 1921-1924 VBD denotes was
T27968 1917-1920 NNP denotes RNA
T27967 1913-1916 CC denotes and
T27966 1911-1912 , denotes ,
T27965 1910-1911 NNP denotes C
T27964 1909-1910 CD denotes °
T27963 1907-1909 CD denotes 37
T27962 1904-1906 IN denotes at
T27961 1898-1903 NNS denotes hours
T27960 1895-1897 CD denotes 16
T27959 1891-1894 IN denotes for
T27958 1880-1890 JJ denotes uninfected
T27957 1875-1879 VBN denotes left
T27956 1872-1874 CC denotes or
T27955 1870-1871 -RRB- denotes )
T27954 1863-1870 NNS denotes bacilli
T27953 1862-1863 VBP denotes ∶
T27952 1857-1862 NNS denotes cells
T27951 1855-1856 CD denotes 1
T27950 1854-1855 CD denotes ∶
T27949 1853-1854 CD denotes 1
T27948 1852-1853 -LRB- denotes (
T27947 1844-1851 NNP denotes CDC1551
T27946 1837-1843 NN denotes strain
T27945 1833-1836 NNP denotes MTb
T27944 1828-1832 IN denotes with
T27943 1819-1827 VBN denotes infected
T27942 1814-1818 VBD denotes were
T27941 1808-1813 NNS denotes Cells
T27940 1806-1807 . denotes .
T27939 1799-1806 NNPS denotes Methods
T27938 1795-1798 CC denotes and
T27937 1785-1794 NNPS denotes Materials
T27936 1782-1784 IN denotes in
T27935 1772-1781 VBN denotes described
T27934 1769-1771 IN denotes as
T27933 1757-1768 VBN denotes constructed
T27932 1752-1756 VBD denotes were
T27931 1748-1751 NNP denotes GFP
T27930 1738-1747 VBG denotes targeting
T27929 1732-1737 NNP denotes shRNA
T27928 1724-1731 VB denotes control
T27927 1721-1723 CC denotes or
T27926 1715-1720 NNP denotes MyD88
T27925 1705-1714 VBG denotes targeting
T27924 1699-1704 NNP denotes shRNA
T27923 1676-1698 JJ denotes lentivirally-delivered
T27922 1668-1675 VBP denotes express
T27921 1653-1667 RB denotes constitutively
T27920 1648-1652 WDT denotes that
T27919 1642-1647 NNS denotes cells
T27918 1636-1641 CD denotes THP-1
T27917 1634-1635 . denotes .
T27916 1625-1634 NNS denotes monocytes
T27915 1619-1624 JJ denotes human
T27914 1616-1618 IN denotes in
T27913 1605-1615 NN denotes expression
T27912 1600-1604 NN denotes gene
T27911 1594-1599 CD denotes NFAT5
T27910 1591-1593 IN denotes of
T27909 1581-1590 NN denotes induction
T27908 1577-1580 NNP denotes MTb
T27907 1573-1576 IN denotes for
T27906 1563-1572 JJ denotes important
T27905 1560-1562 VBZ denotes is
T27904 1554-1559 NNP denotes MyD88
T27903 1552-1553 -RRB- denotes )
T27902 1551-1552 NNP denotes B
T27901 1550-1551 -LRB- denotes (
T27900 1548-1549 . denotes .
T27899 1547-1548 -RRB- denotes )
T27898 1543-1547 CD denotes 0.01
T27897 1542-1543 NN denotes <
T27896 1541-1542 JJ denotes p
T27895 1539-1540 , denotes ,
T27894 1537-1539 SYM denotes **
T27893 1536-1537 -LRB- denotes (
T27892 1532-1535 NNP denotes MTb
T27891 1527-1531 IN denotes with
T27890 1518-1526 VBN denotes infected
T27889 1515-1517 CC denotes or
T27888 1513-1514 -RRB- denotes )
T27887 1509-1513 CD denotes 0.05
T27886 1508-1509 RB denotes <
T27885 1507-1508 VB denotes p
T27884 1505-1506 , denotes ,
T27883 1504-1505 SYM denotes *
T27882 1503-1504 -LRB- denotes (
T27881 1495-1502 NNS denotes Pam3Cys
T27880 1490-1494 IN denotes with
T27879 1480-1489 VBN denotes incubated
T27878 1475-1479 VBD denotes were
T27877 1469-1474 NNS denotes cells
T27876 1465-1468 DT denotes the
T27875 1460-1464 WRB denotes when
T27874 1450-1459 VBN denotes increased
T28186 3057-3058 -RRB- denotes )
T28185 3053-3057 CD denotes 0.01
T28184 3052-3053 NN denotes <
T28183 3051-3052 JJ denotes p
T28182 3049-3050 , denotes ,
T28181 3047-3049 SYM denotes **
T28180 3045-3046 : denotes ;
T28179 3041-3045 CD denotes 0.05
T28178 3040-3041 RB denotes <
T28177 3039-3040 VB denotes p
T28176 3037-3038 , denotes ,
T28175 3036-3037 SYM denotes *
T28174 3035-3036 -LRB- denotes (
T28173 3033-3034 . denotes .
T28172 3025-3033 NNS denotes controls
T28171 3022-3024 IN denotes as
T28170 3013-3021 VBN denotes measured
T28169 3008-3012 VBD denotes were
T28168 3006-3007 , denotes ,
T28167 2996-3006 NN denotes activation
T28166 2992-2995 NNP denotes PRR
T28165 2989-2991 IN denotes by
T28164 2981-2988 VBN denotes induced
T28163 2978-2980 VB denotes be
T28162 2975-2977 TO denotes to
T28161 2969-2974 CD denotes TRAF6
T28160 2965-2968 CC denotes and
T28159 2959-2964 CD denotes IRAK1
T28158 2951-2958 VBP denotes require
T28157 2945-2950 WDT denotes which
T28156 2942-2944 IN denotes of
T28155 2937-2941 DT denotes both
T28154 2935-2936 , denotes ,
T28153 2930-2935 NNP denotes mRNAs
T28152 2925-2929 NNP denotes CD86
T28151 2921-2924 CC denotes and
T28150 2917-2920 NNP denotes TNF
T28149 2915-2916 . denotes .
T28148 2914-2915 -RRB- denotes )
T28147 2910-2914 NNS denotes bars
T28146 2905-2909 JJ denotes open
T28145 2904-2905 -LRB- denotes (
T28144 2898-2903 NNP denotes shRNA
T28143 2890-2897 NN denotes control
T28142 2879-2889 VBG denotes expressing
T28141 2873-2878 NNS denotes cells
T28140 2870-2872 TO denotes to
T28139 2861-2869 VBN denotes compared
T28138 2859-2860 -RRB- denotes )
T28137 2855-2859 NNS denotes bars
T28136 2849-2854 JJ denotes black
T28135 2848-2849 -LRB- denotes (
T28134 2842-2847 NNP denotes shRNA
T28133 2840-2841 -RRB- denotes )
T28132 2839-2840 NNP denotes D
T28131 2838-2839 -LRB- denotes (
T28130 2832-2837 CD denotes TRAF6
T28129 2829-2831 CC denotes or
T28128 2827-2828 -RRB- denotes )
T28127 2826-2827 NNP denotes C
T28126 2825-2826 -LRB- denotes (
T28125 2819-2824 NNP denotes IRAK1
T28124 2812-2818 CC denotes either
T28123 2801-2811 VBG denotes expressing
T28122 2795-2800 NNS denotes cells
T28121 2782-2794 JJ denotes MTb-infected
T28120 2778-2781 DT denotes the
T28119 2775-2777 IN denotes in
T28118 2765-2774 VBN denotes inhibited
T28117 2751-2764 RB denotes significantly
T28116 2747-2750 VBD denotes was
T28115 2736-2746 NN denotes expression
T28114 2730-2735 CD denotes NFAT5
T28113 2728-2729 . denotes .
T28112 2720-2728 VBN denotes analyzed
T28111 2716-2719 VBD denotes was
T28110 2712-2715 NNP denotes RNA
T28109 2708-2711 CC denotes and
T28108 2706-2707 , denotes ,
T28107 2705-2706 NNP denotes C
T28106 2704-2705 CD denotes °
T28105 2702-2704 CD denotes 37
T28104 2699-2701 IN denotes at
T28103 2693-2698 NNS denotes hours
T28102 2690-2692 CD denotes 16
T28101 2686-2689 IN denotes for
T28100 2675-2685 JJ denotes uninfected
T28099 2670-2674 VBD denotes left
T28098 2667-2669 CC denotes or
T28097 2659-2666 CD denotes CDC1551
T28096 2652-2658 NN denotes strain
T28095 2648-2651 NNP denotes MTb
T28094 2643-2647 IN denotes with
T28093 2634-2642 VBN denotes infected
T28092 2629-2633 VBD denotes were
T28091 2623-2628 NNS denotes Cells
T28090 2621-2622 . denotes .
T27873 1436-1449 RB denotes significantly
T27872 1432-1435 VBD denotes was
T27871 1421-1431 NN denotes expression
T27870 1416-1420 NNP denotes mRNA
T27869 1410-1415 CD denotes NFAT5
T27868 1408-1409 . denotes .
T27867 1400-1408 VBN denotes measured
T27866 1395-1399 VBD denotes were
T27865 1388-1394 NNS denotes levels
T27864 1383-1387 NNP denotes mRNA
T27863 1377-1382 NNP denotes NFAT5
T27848 1323-1324 CD denotes ∶
T27847 1322-1323 CD denotes 1
T27846 1321-1322 -LRB- denotes (
T27845 1313-1320 NNP denotes CDC1551
T27844 1306-1312 NN denotes strain
T27843 1302-1305 NNP denotes MTb
T27842 1297-1301 IN denotes with
T27841 1288-1296 VBN denotes infected
T27840 1286-1287 , denotes ,
T27839 1285-1286 -RRB- denotes )
T27838 1283-1285 NN denotes ml
T27837 1282-1283 NN denotes /
T27836 1280-1282 NN denotes µg
T27835 1278-1279 CD denotes 5
T27834 1277-1278 -LRB- denotes (
T27833 1269-1276 NNS denotes Pam3Cys
T27832 1262-1268 NN denotes ligand
T27831 1248-1261 JJ denotes TLR2-specific
T27830 1244-1247 DT denotes the
T27829 1239-1243 IN denotes with
T27828 1229-1238 VBN denotes incubated
T27827 1224-1228 VBD denotes were
T27826 1218-1223 NNS denotes cells
T27825 1212-1217 CD denotes THP-1
T27824 1210-1211 . denotes .
T27823 1201-1210 NNS denotes monocytes
T27822 1198-1200 IN denotes in
T27821 1188-1197 NN denotes synthesis
T27820 1183-1187 NNP denotes mRNA
T27819 1177-1182 CD denotes NFAT5
T27818 1168-1176 VBZ denotes enhances
T27817 1154-1167 RB denotes significantly
T27816 1149-1153 CD denotes TLR2
T27815 1146-1148 IN denotes of
T27814 1135-1145 NNP denotes Engagement
T27813 1133-1134 -RRB- denotes )
T27812 1132-1133 NNP denotes A
T27811 1131-1132 -LRB- denotes (
T27810 1129-1130 . denotes .
T27809 1120-1129 NNS denotes monocytes
T27808 1114-1119 JJ denotes human
T27807 1111-1113 IN denotes in
T27806 1100-1110 NN denotes expression
T27805 1094-1099 CD denotes NFAT5
T27804 1091-1093 IN denotes of
T27803 1081-1090 NN denotes induction
T27802 1077-1080 NNP denotes MTb
T27801 1073-1076 IN denotes for
T27800 1063-1072 JJ denotes important
T27799 1060-1062 VBZ denotes is
T27798 1052-1059 NN denotes cascade
T27797 1042-1051 VBG denotes signaling
T27796 1027-1041 JJ denotes MyD88-mediated
T27795 1023-1026 DT denotes The
T16683 5194-5195 . denotes .
T16682 5189-5194 NNP denotes TRAF6
T16681 5185-5188 CC denotes and
T16680 5179-5184 NNP denotes IRAK1
T16679 5169-5178 NNS denotes molecules
T16678 5161-5168 NN denotes adaptor
T16677 5144-5160 JJ denotes MyD88-associated
T16676 5140-5143 DT denotes the
T16675 5136-5139 CC denotes and
T16674 5130-5135 NNP denotes MyD88
T16673 5127-5129 IN denotes of
T16672 5116-5126 NN denotes activation
T16671 5107-5115 VBZ denotes requires
T16670 5101-5106 NNS denotes cells
T16669 5091-5100 JJ denotes monocytic
T16668 5085-5090 JJ denotes human
T16667 5082-5084 IN denotes in
T16666 5071-5081 NN denotes expression
T16665 5066-5070 NN denotes gene
T16664 5060-5065 CD denotes NFAT5
T16663 5057-5059 IN denotes of
T16662 5044-5056 NN denotes upregulation
T16661 5040-5043 NNP denotes MTb
T16660 5035-5039 IN denotes that
T16659 5023-5034 VBP denotes demonstrate
T16658 5015-5022 RB denotes clearly
T16657 5007-5014 NNS denotes results
T16656 5001-5006 DT denotes these
T16655 4999-5000 , denotes ,
T16654 4991-4999 RB denotes together
T16653 4985-4990 VBN denotes Taken
T16652 4983-4984 . denotes .
T16651 4982-4983 -RRB- denotes )
T16650 4980-4982 NNP denotes 7D
T16649 4977-4979 NNP denotes 7C
T16648 4969-4976 NNS denotes Figures
T16647 4968-4969 -LRB- denotes (
T16646 4958-4967 NNS denotes monocytes
T16645 4945-4957 JJ denotes MTb-infected
T16644 4942-4944 IN denotes in
T16643 4924-4941 NN denotes MyD88-independent
T16642 4920-4923 CC denotes but
T16641 4918-4919 , denotes ,
T16640 4903-4918 JJ denotes TRAF6-dependent
T16639 4899-4902 CC denotes and
T16638 4897-4898 : denotes -
T16637 4892-4897 SYM denotes IRAK1
T16636 4889-4891 VBZ denotes is
T16635 4878-4888 NN denotes expression
T16634 4873-4877 NNP denotes CD86
T16633 4868-4872 IN denotes that
T16632 4857-4867 VBG denotes indicating
T16631 4855-4856 , denotes ,
T16630 4849-4855 NNS denotes levels
T16629 4844-4848 NNP denotes mRNA
T16628 4839-4843 NNP denotes CD86
T16627 4831-4838 VBD denotes reduced
T16626 4817-4830 RB denotes significantly
T16625 4806-4816 NN denotes expression
T16624 4801-4805 NN denotes gene
T16623 4795-4800 CD denotes TRAF6
T16622 4791-4794 CC denotes and
T16621 4785-4790 CD denotes IRAK1
T16620 4782-4784 IN denotes of
T16619 4771-4781 NN denotes abrogation
T16618 4769-4770 , denotes ,
T16617 4768-4769 -RRB- denotes )
T16616 4766-4768 NN denotes 7B
T16615 4759-4765 NNP denotes Figure
T16614 4758-4759 -LRB- denotes (
T16613 4752-4757 NNP denotes MyD88
T16612 4749-4751 IN denotes on
T16611 4742-4748 VB denotes depend
T16610 4738-4741 RB denotes not
T16609 4734-4737 VBD denotes did
T16608 4723-4733 NN denotes expression
T16607 4718-4722 NN denotes gene
T16606 4713-4717 NNP denotes CD86
T16605 4704-4712 IN denotes Although
T16604 4702-4703 . denotes .
T16603 4694-4702 VBN denotes reported
T16602 4683-4693 RB denotes previously
T16601 4680-4682 IN denotes as
T16600 4670-4679 NN denotes infection
T16599 4666-4669 NNP denotes MTb
T16598 4663-4665 TO denotes to
T16597 4653-4662 JJ denotes secondary
T16596 4642-4652 NN denotes expression
T16595 4637-4641 NN denotes gene
T16594 4633-4636 NNP denotes TNF
T16593 4630-4632 IN denotes in
T16592 4624-4629 NNP denotes TRAF6
T16591 4620-4623 CC denotes and
T16590 4614-4619 NNP denotes IRAK1
T16589 4610-4613 IN denotes for
T16588 4605-4609 NN denotes role
T16587 4603-4604 DT denotes a
T16586 4598-4602 IN denotes with
T16585 4587-4597 JJ denotes consistent
T16584 4585-4586 , denotes ,
T16583 4584-4585 -RRB- denotes )
T16582 4582-4584 NNP denotes 7D
T16581 4579-4581 NNP denotes 7C
T16580 4571-4578 NNS denotes Figures
T16579 4570-4571 -LRB- denotes (
T16578 4562-4569 VBN denotes reduced
T16577 4548-4561 RB denotes significantly
T16576 4543-4547 RB denotes also
T16575 4539-4542 VBD denotes was
T16574 4528-4538 NN denotes expression
T16573 4523-4527 NN denotes gene
T16572 4519-4522 NNP denotes TNF
T16571 4507-4518 JJ denotes MTb-induced
T16570 4505-4506 , denotes ,
T16569 4497-4505 VBN denotes expected
T16568 4494-4496 IN denotes As
T16567 4492-4493 . denotes .
T16566 4486-4492 NNS denotes levels
T16565 4481-4485 NNP denotes mRNA
T16564 4475-4480 NNP denotes NFAT5
T16563 4467-4474 VBD denotes induced
T16562 4463-4466 NNP denotes MTb
T16561 4453-4462 VBD denotes inhibited
T16560 4439-4452 RB denotes significantly
T16559 4433-4438 CD denotes TRAF6
T16558 4429-4432 CC denotes and
T16557 4423-4428 CD denotes IRAK1
T16556 4418-4422 DT denotes both
T16313 3081-3086 NNP denotes MyD88
T16312 3072-3080 NN denotes molecule
T16311 3064-3071 NN denotes adaptor
T16310 3060-3063 DT denotes The
T16309 977-978 . denotes .
T16308 976-977 -RRB- denotes )
T16307 974-976 NN denotes 7A
T16306 967-973 NN denotes Figure
T16305 966-967 -LRB- denotes (
T16304 955-965 NN denotes expression
T16303 950-954 NN denotes gene
T16215 418-419 . denotes .
T16214 412-418 NNS denotes levels
T16213 407-411 NNP denotes mRNA
T16212 401-406 NNP denotes NFAT5
T16211 391-400 VBG denotes enhancing
T16210 388-390 IN denotes in
T16209 379-387 NN denotes ligation
T16208 374-378 CD denotes TLR2
T16207 371-373 IN denotes of
T16206 359-370 NN denotes requirement
T16205 355-358 DT denotes the
T16204 345-354 VBG denotes examining
T16203 342-344 IN denotes by
T16202 336-341 VBD denotes began
T16201 333-335 PRP denotes We
T16200 331-332 . denotes .
T16199 321-331 NN denotes expression
T16198 316-320 NN denotes gene
T16197 310-315 CD denotes NFAT5
T16196 307-309 IN denotes of
T16195 295-306 NN denotes stimulation
T16194 291-294 NNP denotes MTb
T16193 287-290 IN denotes for
T16192 278-286 VBN denotes required
T16191 274-277 VBP denotes are
T16190 269-273 WDT denotes that
T16189 261-268 NN denotes pathway
T16188 257-260 NNP denotes TLR
T16187 253-256 DT denotes the
T16186 250-252 IN denotes in
T16185 240-249 NNS denotes molecules
T16184 230-239 VBG denotes signaling
T16183 221-229 JJ denotes specific
T16182 217-220 IN denotes for
T16181 205-216 NN denotes requirement
T16180 201-204 DT denotes the
T16179 188-200 VBD denotes investigated
T16178 183-187 JJ denotes next
T16177 180-182 PRP denotes we
T16176 178-179 , denotes ,
T16175 167-178 NN denotes replication
T16174 161-166 NN denotes HIV-1
T16173 149-160 JJ denotes MTb-induced
T16172 147-148 , denotes ,
T16171 132-147 JJ denotes NFAT5-dependent
T16170 121-131 VBG denotes underlying
T16169 110-120 NNS denotes mechanisms
T16168 101-109 JJ denotes cellular
T16167 97-100 DT denotes the
T16166 88-96 VB denotes decipher
T16165 85-87 TO denotes to
T16164 79-84 VB denotes begin
T16163 76-78 TO denotes To
T16162 68-75 NN denotes cascade
T16161 58-67 VBG denotes signaling
T16160 42-57 JJ denotes MyD88-dependent
T16159 38-41 DT denotes the
T16158 34-37 IN denotes via
T16555 4415-4417 IN denotes of
T16554 4405-4414 NN denotes knockdown
T16553 4403-4404 , denotes ,
T16552 4401-4403 NNP denotes 7D
T16551 4397-4400 CC denotes and
T16550 4394-4396 NNP denotes 7C
T16549 4386-4393 NNS denotes Figures
T16548 4383-4385 IN denotes in
T16547 4377-4382 VBN denotes shown
T16546 4374-4376 IN denotes As
T16510 4132-4136 IN denotes upon
T16509 4122-4131 JJ denotes dependent
T16508 4119-4121 VBZ denotes is
T16507 4113-4118 NNP denotes NFAT5
T16506 4110-4112 IN denotes of
T16505 4099-4109 NN denotes regulation
T16504 4095-4098 NNP denotes MTb
T16503 4093-4094 , denotes ,
T16502 4089-4093 RB denotes Thus
T16501 4087-4088 . denotes .
T16500 4081-4087 NNS denotes levels
T16499 4076-4080 NNP denotes mRNA
T16498 4071-4075 NNP denotes CD86
T16497 4068-4070 IN denotes on
T16496 4061-4067 NN denotes impact
T16495 4058-4060 DT denotes no
T16494 4054-4057 VBD denotes had
T16493 4050-4053 CC denotes and
T16492 4043-4049 NNS denotes levels
T16491 4038-4042 NNP denotes mRNA
T16490 4034-4037 NNP denotes TNF
T16489 4030-4033 CC denotes and
T16488 4024-4029 NNS denotes NFAT5
T16487 4012-4023 JJ denotes MTb-induced
T16486 4002-4011 VBD denotes inhibited
T16485 3989-4001 RB denotes specifically
T16484 3983-3988 NNP denotes MyD88
T16483 3980-3982 IN denotes of
T16482 3970-3979 NN denotes knockdown
T16481 3968-3969 , denotes ,
T16480 3966-3968 NN denotes 7B
T16479 3959-3965 NN denotes Figure
T16478 3956-3958 IN denotes in
T16477 3950-3955 VBN denotes shown
T16476 3947-3949 IN denotes As
T16475 3945-3946 . denotes .
T16474 3944-3945 NNP denotes ]
T16473 3942-3944 CD denotes 56
T16472 3941-3942 NNP denotes [
T16471 3939-3940 , denotes ,
T16470 3938-3939 NNP denotes ]
T16469 3936-3938 CD denotes 55
T16468 3935-3936 NNP denotes [
T16467 3930-3934 NNP denotes CD86
T16466 3925-3929 NN denotes gene
T16465 3907-3924 JJ denotes MyD88-independent
T16464 3903-3906 DT denotes the
T16463 3900-3902 IN denotes of
T16462 3893-3899 NNS denotes levels
T16461 3888-3892 NNP denotes mRNA
T16460 3879-3887 VBD denotes measured
T16459 3876-3878 PRP denotes we
T16458 3874-3875 , denotes ,
T16457 3867-3874 NN denotes control
T16456 3858-3866 JJ denotes negative
T16455 3856-3857 DT denotes a
T16454 3852-3855 IN denotes For
T16453 3850-3851 . denotes .
T16452 3844-3850 NNS denotes levels
T16451 3839-3843 NNP denotes mRNA
T16450 3835-3838 NNP denotes TNF
T16449 3826-3834 VBD denotes measured
T16448 3823-3825 PRP denotes we
T16447 3815-3822 NN denotes control
T16446 3806-3814 JJ denotes positive
T16445 3804-3805 DT denotes a
T16444 3801-3803 IN denotes as
T16443 3799-3800 , denotes ,
T16442 3798-3799 NNP denotes ]
T16441 3796-3798 CD denotes 55
T16440 3795-3796 NNP denotes [
T16439 3793-3794 , denotes ,
T16438 3792-3793 NNP denotes ]
T16437 3790-3792 CD denotes 54
T16436 3789-3790 NNP denotes [
T16435 3787-3788 , denotes ,
T16434 3786-3787 NNP denotes ]
T16433 3784-3786 CD denotes 21
T16432 3783-3784 NNP denotes [
T16431 3778-3782 NN denotes gene
T16430 3762-3777 JJ denotes MyD88-dependent
T16429 3760-3761 DT denotes a
T16428 3757-3759 VBZ denotes is
T16427 3753-3756 NNP denotes TNF
T16426 3747-3752 IN denotes Since
T16425 3745-3746 . denotes .
T16424 3737-3745 VBN denotes examined
T16423 3732-3736 VBD denotes were
T16422 3725-3731 NNS denotes levels
T16421 3720-3724 NNP denotes mRNA
T16420 3714-3719 NNP denotes NFAT5
T16419 3710-3713 CC denotes and
T16418 3708-3709 -RRB- denotes )
T16417 3701-3708 NNP denotes CDC1551
T16416 3700-3701 -LRB- denotes (
T16415 3696-3699 NNP denotes MTb
T16414 3691-3695 IN denotes with
T16413 3682-3690 VBN denotes infected
T16412 3677-3681 RB denotes then
T16411 3672-3676 VBD denotes were
T16410 3666-3671 NNS denotes cells
T16409 3660-3665 CD denotes THP-1
T16408 3650-3659 NN denotes knockdown
T16407 3644-3649 NNP denotes MyD88
T16406 3638-3643 DT denotes These
T16405 3636-3637 . denotes .
T16404 3635-3636 -RRB- denotes )
T16403 3630-3635 VBN denotes shown
T16402 3626-3629 RB denotes not
T16401 3621-3625 NNS denotes data
T16400 3620-3621 -LRB- denotes (
T16399 3614-3619 NNP denotes shRNA
T16398 3610-3613 NNP denotes GFP
T16397 3602-3609 NN denotes control
T16396 3591-3601 VBG denotes expressing
T16395 3580-3590 NN denotes lentivirus
T16394 3578-3579 DT denotes a
T27858 1359-1360 . denotes .
T27857 1350-1359 JJ denotes untreated
T27856 1345-1349 VBD denotes left
T27855 1342-1344 CC denotes or
T27854 1340-1341 , denotes ,
T27853 1339-1340 -RRB- denotes )
T27852 1332-1339 NNS denotes bacilli
T27851 1331-1332 VBP denotes ∶
T27850 1326-1331 NNS denotes cells
T27849 1324-1325 CD denotes 1
T27862 1375-1376 , denotes ,
T27861 1370-1375 NNS denotes hours
T27860 1367-1369 CD denotes 16
T27859 1361-1366 IN denotes After
T16274 765-770 NNP denotes NFAT5
T16273 756-764 VBN denotes enhanced
T16257 678-680 PRP denotes we
T16256 667-677 NN denotes experiment
T16255 662-666 DT denotes this
T16254 658-661 IN denotes for
T16253 650-657 NN denotes control
T16252 641-649 JJ denotes positive
T16251 639-640 DT denotes a
T16250 636-638 IN denotes As
T16249 634-635 . denotes .
T16248 633-634 -RRB- denotes )
T16247 631-633 NN denotes 7A
T16246 624-630 NN denotes Figure
T16245 623-624 -LRB- denotes (
T16244 617-622 NNS denotes cells
T16243 609-616 NN denotes control
T16242 593-608 JJ denotes mock-stimulated
T16241 590-592 TO denotes to
T16240 581-589 VBN denotes compared
T16239 578-580 IN denotes as
T16238 572-577 NNS denotes cells
T16237 553-571 JJ denotes Pam3Cys-stimulated
T16236 550-552 IN denotes in
T16235 540-549 VBN denotes increased
T16234 526-539 RB denotes significantly
T16233 521-525 VBD denotes were
T16232 514-520 NNS denotes levels
T16231 509-513 NNP denotes mRNA
T16230 503-508 NNP denotes NFAT5
T16229 501-502 , denotes ,
T16228 496-501 NNS denotes hours
T16227 493-495 CD denotes 16
T16226 489-492 IN denotes for
T16225 481-488 NNS denotes Pam3Cys
T16224 473-480 NN denotes agonist
T16223 459-472 JJ denotes TLR2-specific
T16222 455-458 DT denotes the
T16221 450-454 IN denotes with
T16220 442-449 VBN denotes treated
T16219 437-441 VBD denotes were
T16218 431-436 NNS denotes cells
T16217 425-430 JJ denotes THP-1
T16216 420-424 WRB denotes When
T16302 944-949 CD denotes NFAT5
T16301 941-943 IN denotes on
T16300 934-940 NN denotes effect
T16299 922-933 JJ denotes stimulatory
T16298 918-921 PRP$ denotes its
T16297 907-917 VBG denotes augmenting
T16296 905-906 , denotes ,
T16295 896-905 NN denotes infection
T16294 892-895 NNP denotes MTb
T16293 885-891 JJ denotes actual
T16292 878-884 IN denotes during
T16291 868-877 VBN denotes triggered
T16290 865-867 VB denotes be
T16289 861-864 MD denotes may
T16288 856-860 NNS denotes PRRs
T16287 845-855 JJ denotes additional
T16286 840-844 IN denotes that
T16285 829-839 VBG denotes suggesting
T16284 827-828 , denotes ,
T16283 816-827 NN denotes stimulation
T16282 808-815 NNS denotes Pam3Cys
T16281 803-807 IN denotes than
T16280 796-802 NN denotes extent
T16279 788-795 JJR denotes greater
T16278 786-787 DT denotes a
T16277 783-785 TO denotes to
T16276 776-782 NNS denotes levels
T16275 771-775 NNP denotes mRNA
T16272 746-755 NN denotes infection
T16271 742-745 NNP denotes MTb
T16270 740-741 , denotes ,
T16269 733-740 RB denotes Notably
T16268 731-732 . denotes .
T16267 730-731 -RRB- denotes )
T16266 728-730 NN denotes 7A
T16265 721-727 NNP denotes Figure
T16264 720-721 -LRB- denotes (
T16263 712-719 NNP denotes CDC1551
T16262 707-711 IN denotes with
T16261 701-706 NNS denotes cells
T16260 695-700 CD denotes THP-1
T16259 686-694 VBD denotes infected
T16258 681-685 RB denotes also
T16353 3295-3300 JJ denotes THP-1
T16352 3293-3294 DT denotes a
T16351 3281-3292 VBD denotes constructed
T16350 3278-3280 PRP denotes we
T16349 3276-3277 , denotes ,
T16348 3266-3276 NN denotes expression
T16347 3261-3265 NN denotes gene
T16346 3255-3260 CD denotes NFAT5
T16345 3252-3254 IN denotes of
T16344 3242-3251 NN denotes induction
T16343 3238-3241 NNP denotes MTb
T16342 3234-3237 IN denotes for
T16341 3224-3233 JJ denotes important
T16340 3221-3223 VBZ denotes is
T16339 3213-3220 NN denotes pathway
T16338 3199-3212 JJ denotes TLR-dependent
T16337 3194-3198 DT denotes this
T16336 3189-3193 IN denotes that
T16335 3187-3188 , denotes ,
T16334 3178-3187 RB denotes therefore
T16333 3176-3177 , denotes ,
T16332 3173-3176 CC denotes and
T16331 3165-3172 NN denotes protein
T16330 3160-3164 DT denotes this
T16329 3155-3159 IN denotes that
T16328 3147-3154 VB denotes confirm
T16327 3144-3146 TO denotes To
T16326 3142-3143 . denotes .
T16325 3141-3142 -RRB- denotes )
T16324 3140-3141 NNP denotes ]
T16323 3138-3140 CD denotes 53
T16322 3137-3138 NNP denotes [
T16321 3134-3136 IN denotes in
T16320 3125-3133 VBN denotes reviewed
T16319 3124-3125 -LRB- denotes (
T16318 3115-3123 NN denotes ligation
T16317 3110-3114 CD denotes TLR2
T16316 3105-3109 IN denotes upon
T16315 3097-3104 NNS denotes signals
T16314 3087-3096 VBZ denotes transmits
T16367 3388-3397 VBG denotes targeting
T16366 3384-3387 NNP denotes RNA
T16365 3383-3384 -RRB- denotes )
T16364 3381-3383 NN denotes sh
T16363 3380-3381 -LRB- denotes (
T16362 3372-3379 NN denotes hairpin
T16361 3366-3371 JJ denotes short
T16360 3343-3365 JJ denotes lentivirally-delivered
T16359 3341-3342 DT denotes a
T16358 3331-3340 VBZ denotes expresses
T16357 3316-3330 RB denotes constitutively
T16356 3311-3315 WDT denotes that
T16355 3306-3310 NN denotes line
T16354 3301-3305 NN denotes cell
T16393 3573-3577 IN denotes with
T16392 3562-3572 VBN denotes transduced
T16391 3556-3561 NNS denotes cells
T16390 3550-3555 JJ denotes THP-1
T16389 3542-3549 VB denotes control
T16388 3539-3541 TO denotes to
T16387 3528-3538 NN denotes comparison
T16386 3525-3527 IN denotes in
T16385 3517-3524 VBN denotes reduced
T16384 3503-3516 RB denotes significantly
T16383 3499-3502 CC denotes and
T16382 3484-3498 RB denotes constitutively
T16381 3479-3483 VBD denotes were
T16380 3473-3478 NNS denotes cells
T16379 3467-3472 DT denotes these
T16378 3464-3466 IN denotes in
T16377 3457-3463 NNS denotes levels
T16376 3452-3456 NNP denotes mRNA
T16375 3446-3451 NNP denotes MyD88
T16374 3441-3445 IN denotes that
T16373 3428-3440 VBD denotes demonstrated
T16372 3419-3427 NN denotes analysis
T16371 3415-3418 NNP denotes PCR
T16370 3405-3414 JJ denotes Real-time
T16369 3403-3404 . denotes .
T16368 3398-3403 NNP denotes MyD88
T16545 4372-4373 . denotes .
T16544 4367-4372 NNP denotes MyD88
T16543 4364-4366 IN denotes of
T16542 4353-4363 JJ denotes downstream
T16541 4343-4352 NNS denotes molecules
T16540 4333-4342 VBG denotes signaling
T16539 4329-4332 CD denotes two
T16538 4327-4328 , denotes ,
T16537 4322-4327 CD denotes TRAF6
T16536 4319-4321 CC denotes or
T16535 4313-4318 CD denotes IRAK1
T16534 4303-4312 VBG denotes targeting
T16533 4296-4302 NNS denotes shRNAs
T16532 4273-4295 JJ denotes lentivirally-delivered
T16531 4268-4272 IN denotes with
T16530 4257-4267 VBN denotes transduced
T16529 4251-4256 NNS denotes cells
T16528 4245-4250 CD denotes THP-1
T16527 4233-4244 VBD denotes constructed
T16526 4228-4232 RB denotes also
T16525 4225-4227 PRP denotes we
T16524 4223-4224 , denotes ,
T16523 4210-4223 NN denotes transcription
T16522 4204-4209 CD denotes NFAT5
T16521 4201-4203 IN denotes of
T16520 4188-4200 NN denotes upregulation
T16519 4184-4187 NNP denotes MTb
T16518 4174-4183 VBG denotes mediating
T16517 4166-4173 NN denotes pathway
T16516 4162-4165 DT denotes the
T16515 4154-4161 VB denotes dissect
T16514 4147-4153 VB denotes futher
T16513 4144-4146 TO denotes To
T16512 4142-4143 . denotes .
T16511 4137-4142 NNP denotes MyD88
R11838 T16159 T16162 det the,cascade
R11839 T16160 T16162 amod MyD88-dependent,cascade
R11840 T16161 T16162 amod signaling,cascade
R11841 T16162 T16158 pobj cascade,via
R11842 T16163 T16164 aux To,begin
R11844 T16165 T16166 aux to,decipher
R11845 T16166 T16164 xcomp decipher,begin
R11846 T16167 T16169 det the,mechanisms
R11847 T16168 T16169 amod cellular,mechanisms
R11881 T16202 T16202 ROOT began,began
R11882 T16203 T16202 prep by,began
R11889 T16210 T16204 prep in,examining
R11891 T16212 T16213 compound NFAT5,mRNA
R11892 T16213 T16214 compound mRNA,levels
R11893 T16214 T16211 dobj levels,enhancing
R11894 T16215 T16202 punct .,began
R11895 T16216 T16220 advmod When,treated
R11896 T16217 T16218 amod THP-1,cells
R11897 T16218 T16220 nsubjpass cells,treated
R11898 T16219 T16220 auxpass were,treated
R11899 T16220 T16235 advcl treated,increased
R11900 T16221 T16220 prep with,treated
R11901 T16222 T16225 det the,Pam3Cys
R11902 T16223 T16225 amod TLR2-specific,Pam3Cys
R11903 T16224 T16225 compound agonist,Pam3Cys
R11904 T16225 T16221 pobj Pam3Cys,with
R11905 T16226 T16220 prep for,treated
R11906 T16227 T16228 nummod 16,hours
R11907 T16228 T16226 pobj hours,for
R11908 T16229 T16235 punct ",",increased
R11909 T16230 T16232 compound NFAT5,levels
R11910 T16231 T16232 compound mRNA,levels
R11911 T16232 T16235 nsubjpass levels,increased
R11912 T16233 T16235 auxpass were,increased
R11913 T16234 T16235 advmod significantly,increased
R11914 T16235 T16235 ROOT increased,increased
R11915 T16236 T16235 prep in,increased
R11916 T16237 T16238 amod Pam3Cys-stimulated,cells
R11917 T16238 T16236 pobj cells,in
R11918 T16239 T16235 prep as,increased
R11919 T16240 T16235 prep compared,increased
R11920 T16241 T16240 prep to,compared
R11921 T16242 T16244 amod mock-stimulated,cells
R11922 T16243 T16244 compound control,cells
R11923 T16244 T16241 pobj cells,to
R11924 T16245 T16247 punct (,7A
R11925 T16246 T16247 compound Figure,7A
R11926 T16247 T16244 appos 7A,cells
R11927 T16248 T16244 punct ),cells
R11928 T16249 T16235 punct .,increased
R11929 T16250 T16259 prep As,infected
R11930 T16251 T16253 det a,control
R11931 T16252 T16253 amod positive,control
R11932 T16253 T16250 pobj control,As
R11933 T16254 T16253 prep for,control
R11934 T16255 T16256 det this,experiment
R11935 T16256 T16254 pobj experiment,for
R11936 T16257 T16259 nsubj we,infected
R11937 T16258 T16259 advmod also,infected
R11938 T16259 T16259 ROOT infected,infected
R11939 T16260 T16261 nummod THP-1,cells
R11940 T16261 T16259 dobj cells,infected
R11941 T16262 T16259 prep with,infected
R11942 T16263 T16262 pobj CDC1551,with
R11943 T16264 T16266 punct (,7A
R11944 T16265 T16266 compound Figure,7A
R11945 T16266 T16263 appos 7A,CDC1551
R11946 T16267 T16266 punct ),7A
R11947 T16268 T16259 punct .,infected
R11948 T16269 T16273 advmod Notably,enhanced
R11949 T16270 T16273 punct ",",enhanced
R11950 T16271 T16272 compound MTb,infection
R11951 T16272 T16273 nsubj infection,enhanced
R11952 T16273 T16273 ROOT enhanced,enhanced
R11953 T16274 T16275 compound NFAT5,mRNA
R11954 T16275 T16276 compound mRNA,levels
R11955 T16276 T16273 dobj levels,enhanced
R11956 T16277 T16276 prep to,levels
R11957 T16278 T16280 det a,extent
R11958 T16279 T16280 amod greater,extent
R11959 T16280 T16277 pobj extent,to
R11960 T16281 T16276 prep than,levels
R11961 T16282 T16283 compound Pam3Cys,stimulation
R11962 T16283 T16281 pobj stimulation,than
R11963 T16284 T16273 punct ",",enhanced
R11964 T16285 T16273 advcl suggesting,enhanced
R11965 T16286 T16291 mark that,triggered
R11966 T16287 T16288 amod additional,PRRs
R11967 T16288 T16291 nsubjpass PRRs,triggered
R11968 T16289 T16291 aux may,triggered
R11969 T16290 T16291 auxpass be,triggered
R11970 T16291 T16285 ccomp triggered,suggesting
R11971 T16292 T16291 prep during,triggered
R11972 T16293 T16295 amod actual,infection
R11973 T16294 T16295 compound MTb,infection
R11974 T16295 T16292 pobj infection,during
R11975 T16296 T16291 punct ",",triggered
R11976 T16297 T16291 advcl augmenting,triggered
R11977 T16298 T16300 poss its,effect
R11978 T16299 T16300 amod stimulatory,effect
R11979 T16300 T16297 dobj effect,augmenting
R11980 T16301 T16300 prep on,effect
R11981 T16302 T16304 nummod NFAT5,expression
R11982 T16303 T16304 compound gene,expression
R11983 T16304 T16301 pobj expression,on
R11984 T16305 T16307 punct (,7A
R11985 T16306 T16307 compound Figure,7A
R11986 T16307 T16304 appos 7A,expression
R11987 T16308 T16307 punct ),7A
R11988 T16309 T16273 punct .,enhanced
R11989 T16310 T16312 det The,molecule
R11990 T16311 T16312 compound adaptor,molecule
R11991 T16312 T16314 nsubj molecule,transmits
R11992 T16313 T16312 appos MyD88,molecule
R11993 T16314 T16314 ROOT transmits,transmits
R11994 T16315 T16314 dobj signals,transmits
R11995 T16316 T16314 prep upon,transmits
R11996 T16317 T16318 nummod TLR2,ligation
R11997 T16318 T16316 pobj ligation,upon
R11998 T16319 T16320 punct (,reviewed
R11999 T16320 T16314 advcl reviewed,transmits
R12000 T16321 T16320 prep in,reviewed
R12001 T16322 T16321 pobj [,in
R12002 T16323 T16324 nummod 53,]
R12003 T16324 T16322 appos ],[
R12004 T16325 T16322 punct ),[
R12005 T16326 T16314 punct .,transmits
R12006 T16327 T16328 aux To,confirm
R12007 T16328 T16328 ROOT confirm,confirm
R12008 T16329 T16351 mark that,constructed
R12009 T16330 T16331 det this,protein
R12010 T16331 T16351 npadvmod protein,constructed
R12011 T16332 T16331 cc and,protein
R12012 T16333 T16331 punct ",",protein
R12013 T16334 T16331 advmod therefore,protein
R12014 T16335 T16331 punct ",",protein
R12015 T16336 T16340 mark that,is
R12016 T16337 T16339 det this,pathway
R12017 T16338 T16339 amod TLR-dependent,pathway
R12018 T16339 T16340 nsubj pathway,is
R12019 T16340 T16331 acl is,protein
R12020 T16341 T16340 acomp important,is
R12021 T16342 T16341 prep for,important
R12022 T16343 T16344 compound MTb,induction
R12023 T16344 T16342 pobj induction,for
R12024 T16345 T16344 prep of,induction
R12025 T16346 T16348 nummod NFAT5,expression
R12026 T16347 T16348 compound gene,expression
R12027 T16348 T16345 pobj expression,of
R12028 T16349 T16351 punct ",",constructed
R12029 T16350 T16351 nsubj we,constructed
R12030 T16351 T16328 ccomp constructed,confirm
R12031 T16352 T16355 det a,line
R12032 T16353 T16355 amod THP-1,line
R12033 T16354 T16355 compound cell,line
R12034 T16355 T16351 dobj line,constructed
R12035 T16356 T16358 nsubj that,expresses
R12036 T16357 T16358 advmod constitutively,expresses
R12037 T16358 T16355 relcl expresses,line
R12038 T16359 T16366 det a,RNA
R12039 T16360 T16362 amod lentivirally-delivered,hairpin
R12040 T16361 T16362 amod short,hairpin
R12041 T16362 T16366 amod hairpin,RNA
R12042 T16363 T16362 punct (,hairpin
R12043 T16364 T16362 appos sh,hairpin
R12044 T16365 T16362 punct ),hairpin
R12045 T16366 T16358 dobj RNA,expresses
R12046 T16367 T16366 acl targeting,RNA
R12047 T16368 T16367 dobj MyD88,targeting
R12048 T16369 T16328 punct .,confirm
R12049 T16370 T16372 amod Real-time,analysis
R12050 T16371 T16372 compound PCR,analysis
R12051 T16372 T16373 nsubj analysis,demonstrated
R12052 T16373 T16373 ROOT demonstrated,demonstrated
R12053 T16374 T16381 mark that,were
R12054 T16375 T16376 compound MyD88,mRNA
R12055 T16376 T16377 compound mRNA,levels
R12056 T16377 T16381 nsubj levels,were
R12057 T16378 T16377 prep in,levels
R12058 T16379 T16380 det these,cells
R12059 T16380 T16378 pobj cells,in
R12060 T16381 T16373 ccomp were,demonstrated
R12061 T16382 T16381 acomp constitutively,were
R12062 T16383 T16382 cc and,constitutively
R12063 T16384 T16382 conj significantly,constitutively
R12064 T16385 T16381 conj reduced,were
R12065 T16386 T16385 prep in,reduced
R12066 T16387 T16386 pobj comparison,in
R12067 T16388 T16389 aux to,control
R12068 T16389 T16385 advcl control,reduced
R12069 T16390 T16391 amod THP-1,cells
R12070 T16391 T16389 dobj cells,control
R12071 T16392 T16391 acl transduced,cells
R12072 T16393 T16392 prep with,transduced
R12073 T16394 T16395 det a,lentivirus
R12074 T16395 T16396 nsubj lentivirus,expressing
R12075 T16396 T16393 pcomp expressing,with
R12076 T16397 T16399 compound control,shRNA
R12077 T16398 T16399 compound GFP,shRNA
R12078 T16399 T16396 dobj shRNA,expressing
R12079 T16400 T16403 punct (,shown
R12080 T16401 T16403 nsubjpass data,shown
R12081 T16402 T16403 neg not,shown
R12082 T16403 T16399 parataxis shown,shRNA
R12083 T16404 T16403 punct ),shown
R12084 T16405 T16373 punct .,demonstrated
R12085 T16406 T16413 nsubjpass These,infected
R12086 T16407 T16408 compound MyD88,knockdown
R12087 T16408 T16413 nsubjpass knockdown,infected
R12088 T16409 T16410 nummod THP-1,cells
R12089 T16410 T16408 appos cells,knockdown
R12090 T16411 T16413 auxpass were,infected
R12091 T16412 T16413 advmod then,infected
R12092 T16413 T16413 ROOT infected,infected
R12093 T16414 T16413 prep with,infected
R12094 T16415 T16422 nmod MTb,levels
R12095 T16416 T16415 punct (,MTb
R12096 T16417 T16415 appos CDC1551,MTb
R12097 T16418 T16415 punct ),MTb
R12098 T16419 T16415 cc and,MTb
R12099 T16420 T16421 compound NFAT5,mRNA
R12100 T16421 T16415 conj mRNA,MTb
R12101 T16422 T16414 pobj levels,with
R12102 T16423 T16424 auxpass were,examined
R12103 T16424 T16413 conj examined,infected
R12104 T16425 T16413 punct .,infected
R12105 T16426 T16428 mark Since,is
R12106 T16427 T16428 nsubj TNF,is
R12107 T16428 T16428 ROOT is,is
R12108 T16429 T16431 det a,gene
R12109 T16430 T16431 amod MyD88-dependent,gene
R12110 T16431 T16428 attr gene,is
R12111 T16432 T16434 nmod [,]
R12112 T16433 T16434 nummod 21,]
R12113 T16434 T16431 appos ],gene
R12114 T16435 T16434 punct ",",]
R12115 T16436 T16434 conj [,]
R12116 T16437 T16438 nummod 54,]
R12117 T16438 T16442 nmod ],]
R12118 T16439 T16438 punct ",",]
R12119 T16440 T16438 conj [,]
R12120 T16441 T16442 nummod 55,]
R12121 T16442 T16434 conj ],]
R12122 T16443 T16442 punct ",",]
R12123 T16444 T16428 prep as,is
R12124 T16445 T16447 det a,control
R12125 T16446 T16447 amod positive,control
R12126 T16447 T16444 pobj control,as
R12127 T16448 T16449 nsubj we,measured
R12128 T16449 T16447 relcl measured,control
R12129 T16450 T16452 compound TNF,levels
R12130 T16451 T16452 compound mRNA,levels
R12131 T16452 T16449 dobj levels,measured
R12132 T16453 T16428 punct .,is
R12133 T16454 T16460 prep For,measured
R12134 T16455 T16457 det a,control
R12135 T16456 T16457 amod negative,control
R12136 T16457 T16454 pobj control,For
R12137 T16458 T16460 punct ",",measured
R12138 T16459 T16460 nsubj we,measured
R12139 T16460 T16460 ROOT measured,measured
R12140 T16461 T16462 compound mRNA,levels
R12141 T16462 T16460 dobj levels,measured
R12142 T16463 T16462 prep of,levels
R12143 T16464 T16466 det the,gene
R12144 T16465 T16466 amod MyD88-independent,gene
R12145 T16466 T16463 pobj gene,of
R12146 T16467 T16468 compound CD86,[
R12147 T16468 T16466 appos [,gene
R12148 T16469 T16470 nummod 55,]
R12149 T16470 T16466 conj ],gene
R12150 T16471 T16470 punct ",",]
R12151 T16472 T16470 conj [,]
R12152 T16473 T16474 nummod 56,]
R12153 T16474 T16470 conj ],]
R12154 T16475 T16460 punct .,measured
R12155 T16476 T16477 mark As,shown
R12156 T16477 T16486 advcl shown,inhibited
R12157 T16478 T16477 prep in,shown
R12158 T16479 T16480 compound Figure,7B
R12159 T16480 T16478 pobj 7B,in
R12160 T16481 T16480 punct ",",7B
R12161 T16482 T16486 nsubj knockdown,inhibited
R12162 T16483 T16482 prep of,knockdown
R12163 T16484 T16483 pobj MyD88,of
R12164 T16485 T16486 advmod specifically,inhibited
R12165 T16486 T16486 ROOT inhibited,inhibited
R12166 T16487 T16488 amod MTb-induced,NFAT5
R12167 T16488 T16486 dobj NFAT5,inhibited
R12168 T16489 T16488 cc and,NFAT5
R12169 T16490 T16491 compound TNF,mRNA
R12170 T16491 T16492 compound mRNA,levels
R12171 T16492 T16488 conj levels,NFAT5
R12172 T16493 T16486 cc and,inhibited
R12173 T16494 T16486 conj had,inhibited
R12174 T16495 T16496 det no,impact
R12175 T16496 T16494 dobj impact,had
R12176 T16497 T16496 prep on,impact
R12177 T16498 T16499 compound CD86,mRNA
R12178 T16499 T16500 compound mRNA,levels
R12179 T16500 T16497 pobj levels,on
R12180 T16501 T16486 punct .,inhibited
R12181 T16502 T16508 advmod Thus,is
R12182 T16503 T16508 punct ",",is
R12183 T16504 T16505 compound MTb,regulation
R12184 T16505 T16508 nsubj regulation,is
R12185 T16506 T16505 prep of,regulation
R12186 T16507 T16506 pobj NFAT5,of
R12187 T16508 T16508 ROOT is,is
R12188 T16509 T16508 acomp dependent,is
R12189 T16510 T16509 prep upon,dependent
R12190 T16511 T16510 pobj MyD88,upon
R12191 T16512 T16508 punct .,is
R12192 T16513 T16515 aux To,dissect
R12193 T16514 T16515 advmod futher,dissect
R12194 T16515 T16527 advcl dissect,constructed
R12195 T16516 T16517 det the,pathway
R12196 T16517 T16515 dobj pathway,dissect
R12197 T16518 T16517 acl mediating,pathway
R12198 T16519 T16520 compound MTb,upregulation
R12199 T16520 T16518 dobj upregulation,mediating
R12200 T16521 T16520 prep of,upregulation
R12201 T16522 T16523 nummod NFAT5,transcription
R12202 T16523 T16521 pobj transcription,of
R12203 T16524 T16527 punct ",",constructed
R12204 T16525 T16527 nsubj we,constructed
R12205 T16526 T16527 advmod also,constructed
R12206 T16527 T16527 ROOT constructed,constructed
R12207 T16528 T16529 nummod THP-1,cells
R12208 T16529 T16527 dobj cells,constructed
R12209 T16530 T16529 acl transduced,cells
R12210 T16531 T16530 prep with,transduced
R12211 T16532 T16533 amod lentivirally-delivered,shRNAs
R12212 T16533 T16534 nsubj shRNAs,targeting
R12213 T16534 T16531 pcomp targeting,with
R12214 T16535 T16534 dobj IRAK1,targeting
R12215 T16536 T16535 cc or,IRAK1
R12216 T16537 T16535 conj TRAF6,IRAK1
R12217 T16538 T16527 punct ",",constructed
R12218 T16539 T16541 nummod two,molecules
R12219 T16540 T16541 compound signaling,molecules
R12220 T16541 T16527 dobj molecules,constructed
R12221 T16542 T16541 amod downstream,molecules
R12222 T16543 T16542 prep of,downstream
R12223 T16544 T16543 pobj MyD88,of
R12224 T16545 T16527 punct .,constructed
R12225 T16546 T16547 mark As,shown
R12226 T16547 T16561 advcl shown,inhibited
R12227 T16548 T16547 prep in,shown
R12228 T16549 T16550 compound Figures,7C
R12229 T16550 T16548 pobj 7C,in
R12230 T16551 T16550 cc and,7C
R12231 T16552 T16550 conj 7D,7C
R12232 T16553 T16552 punct ",",7D
R12233 T16554 T16561 nsubj knockdown,inhibited
R12234 T16555 T16554 prep of,knockdown
R12235 T16556 T16557 det both,IRAK1
R12236 T16557 T16555 pobj IRAK1,of
R12237 T16558 T16557 cc and,IRAK1
R12238 T16559 T16557 conj TRAF6,IRAK1
R12239 T16560 T16561 advmod significantly,inhibited
R12240 T16561 T16563 ccomp inhibited,induced
R12241 T16562 T16563 nsubj MTb,induced
R12242 T16563 T16563 ROOT induced,induced
R12243 T16564 T16565 compound NFAT5,mRNA
R12244 T16565 T16566 compound mRNA,levels
R12245 T16566 T16563 dobj levels,induced
R12246 T16567 T16563 punct .,induced
R12247 T16568 T16569 mark As,expected
R12248 T16569 T16578 advcl expected,reduced
R12249 T16570 T16575 punct ",",was
R12250 T16571 T16572 compound MTb-induced,TNF
R12251 T16572 T16574 compound TNF,expression
R12252 T16573 T16574 compound gene,expression
R12253 T16574 T16575 nsubj expression,was
R12254 T16575 T16578 auxpass was,reduced
R12255 T16576 T16575 advmod also,was
R12256 T16577 T16578 advmod significantly,reduced
R12257 T16578 T16578 ROOT reduced,reduced
R12258 T16579 T16597 punct (,secondary
R12259 T16580 T16581 compound Figures,7C
R12260 T16581 T16597 nsubj 7C,secondary
R12261 T16582 T16581 appos 7D,7C
R12262 T16583 T16581 punct ),7C
R12263 T16584 T16581 punct ",",7C
R12264 T16585 T16581 amod consistent,7C
R12265 T16586 T16585 prep with,consistent
R12266 T16587 T16588 det a,role
R12267 T16588 T16586 pobj role,with
R12268 T16589 T16588 prep for,role
R12269 T16590 T16589 pobj IRAK1,for
R12270 T16591 T16590 cc and,IRAK1
R12271 T16592 T16590 conj TRAF6,IRAK1
R12272 T16593 T16588 prep in,role
R12273 T16594 T16596 compound TNF,expression
R12274 T16595 T16596 compound gene,expression
R12275 T16596 T16593 pobj expression,in
R12276 T16597 T16578 oprd secondary,reduced
R12277 T16598 T16597 prep to,secondary
R12278 T16599 T16600 compound MTb,infection
R12279 T16600 T16598 pobj infection,to
R12280 T16601 T16603 mark as,reported
R12281 T16602 T16603 advmod previously,reported
R12282 T16603 T16597 advcl reported,secondary
R12283 T16604 T16578 punct .,reduced
R12284 T16605 T16611 mark Although,depend
R12285 T16606 T16608 compound CD86,expression
R12286 T16607 T16608 compound gene,expression
R12287 T16608 T16611 nsubj expression,depend
R12288 T16609 T16611 aux did,depend
R12289 T16610 T16611 neg not,depend
R12290 T16611 T16627 advcl depend,reduced
R12291 T16612 T16611 prep on,depend
R12292 T16613 T16612 pobj MyD88,on
R12293 T16614 T16616 punct (,7B
R12294 T16615 T16616 compound Figure,7B
R12295 T16616 T16613 appos 7B,MyD88
R12296 T16617 T16616 punct ),7B
R12297 T16618 T16613 punct ",",MyD88
R12298 T16619 T16625 nmod abrogation,expression
R12299 T16620 T16619 prep of,abrogation
R12300 T16621 T16620 pobj IRAK1,of
R12301 T16622 T16621 cc and,IRAK1
R12302 T16623 T16621 conj TRAF6,IRAK1
R12303 T16624 T16625 compound gene,expression
R12304 T16625 T16611 dobj expression,depend
R12305 T16626 T16627 advmod significantly,reduced
R12306 T16627 T16627 ROOT reduced,reduced
R12307 T16628 T16629 compound CD86,mRNA
R12308 T16629 T16630 compound mRNA,levels
R12309 T16630 T16627 dobj levels,reduced
R12310 T16631 T16627 punct ",",reduced
R12311 T16632 T16627 advcl indicating,reduced
R12312 T16633 T16636 mark that,is
R12313 T16634 T16635 compound CD86,expression
R12314 T16635 T16636 nsubj expression,is
R12315 T16636 T16632 ccomp is,indicating
R12316 T16637 T16636 acomp IRAK1,is
R12317 T16638 T16637 punct -,IRAK1
R12318 T16639 T16637 cc and,IRAK1
R12319 T16640 T16637 conj TRAF6-dependent,IRAK1
R12320 T16641 T16640 punct ",",TRAF6-dependent
R12321 T16642 T16640 cc but,TRAF6-dependent
R12322 T16643 T16640 conj MyD88-independent,TRAF6-dependent
R12323 T16644 T16643 prep in,MyD88-independent
R12324 T16645 T16646 amod MTb-infected,monocytes
R12325 T16646 T16644 pobj monocytes,in
R12326 T16647 T16649 punct (,7C
R12327 T16648 T16649 compound Figures,7C
R12328 T16649 T16640 appos 7C,TRAF6-dependent
R12329 T16650 T16649 appos 7D,7C
R12330 T16651 T16649 punct ),7C
R12331 T16652 T16627 punct .,reduced
R12332 T16653 T16659 advcl Taken,demonstrate
R12333 T16654 T16653 advmod together,Taken
R12334 T16655 T16659 punct ",",demonstrate
R12335 T16656 T16657 det these,results
R12336 T16657 T16659 nsubj results,demonstrate
R12337 T16658 T16659 advmod clearly,demonstrate
R12338 T16659 T16659 ROOT demonstrate,demonstrate
R12339 T16660 T16671 mark that,requires
R12340 T16661 T16662 compound MTb,upregulation
R12341 T16662 T16671 nsubj upregulation,requires
R12342 T16663 T16662 prep of,upregulation
R12343 T16664 T16666 nummod NFAT5,expression
R12344 T16665 T16666 compound gene,expression
R12345 T16666 T16663 pobj expression,of
R12346 T16667 T16666 prep in,expression
R12347 T16668 T16670 amod human,cells
R12348 T16669 T16670 amod monocytic,cells
R12349 T16670 T16667 pobj cells,in
R12350 T16671 T16659 ccomp requires,demonstrate
R12351 T16672 T16671 dobj activation,requires
R12352 T16673 T16672 prep of,activation
R12353 T16674 T16673 pobj MyD88,of
R12354 T16675 T16672 cc and,activation
R12355 T16676 T16679 det the,molecules
R12356 T16677 T16679 amod MyD88-associated,molecules
R12357 T16678 T16679 compound adaptor,molecules
R12358 T16679 T16680 nmod molecules,IRAK1
R12359 T16680 T16672 conj IRAK1,activation
R12360 T16681 T16680 cc and,IRAK1
R12361 T16682 T16680 conj TRAF6,IRAK1
R12362 T16683 T16659 punct .,demonstrate
R20182 T27795 T27798 det The,cascade
R20183 T27796 T27798 amod MyD88-mediated,cascade
R20184 T27797 T27798 amod signaling,cascade
R20185 T27798 T27799 nsubj cascade,is
R20186 T27799 T27799 ROOT is,is
R20187 T27800 T27799 acomp important,is
R20188 T27801 T27800 prep for,important
R20189 T27802 T27803 compound MTb,induction
R20190 T27803 T27801 pobj induction,for
R20191 T27804 T27803 prep of,induction
R20192 T27805 T27806 nummod NFAT5,expression
R20193 T27806 T27804 pobj expression,of
R20194 T27807 T27803 prep in,induction
R20195 T27808 T27809 amod human,monocytes
R20196 T27809 T27807 pobj monocytes,in
R20197 T27810 T27799 punct .,is
R20198 T27811 T27814 punct (,Engagement
R20199 T27812 T27814 nmod A,Engagement
R20200 T27813 T27814 punct ),Engagement
R20201 T27814 T27818 nsubj Engagement,enhances
R20202 T27815 T27814 prep of,Engagement
R20203 T27816 T27815 pobj TLR2,of
R20204 T27817 T27818 advmod significantly,enhances
R20205 T27818 T27818 ROOT enhances,enhances
R20206 T27819 T27821 nummod NFAT5,synthesis
R20207 T27820 T27821 compound mRNA,synthesis
R20208 T27821 T27818 dobj synthesis,enhances
R20209 T27822 T27821 prep in,synthesis
R20210 T27823 T27822 pobj monocytes,in
R20211 T27824 T27818 punct .,enhances
R20212 T27825 T27826 nummod THP-1,cells
R20213 T27826 T27828 nsubjpass cells,incubated
R20214 T27827 T27828 auxpass were,incubated
R20215 T27828 T27828 ROOT incubated,incubated
R20216 T27829 T27828 prep with,incubated
R20217 T27830 T27833 det the,Pam3Cys
R20218 T27831 T27833 amod TLR2-specific,Pam3Cys
R20219 T27832 T27833 compound ligand,Pam3Cys
R20220 T27833 T27829 pobj Pam3Cys,with
R20221 T27834 T27833 punct (,Pam3Cys
R20222 T27835 T27836 nummod 5,µg
R20223 T27836 T27838 nmod µg,ml
R20224 T27837 T27838 compound /,ml
R20225 T27838 T27833 appos ml,Pam3Cys
R20226 T27839 T27833 punct ),Pam3Cys
R20227 T27840 T27828 punct ",",incubated
R20228 T27841 T27828 conj infected,incubated
R20229 T27842 T27841 prep with,infected
R20230 T27843 T27844 compound MTb,strain
R20231 T27844 T27845 compound strain,CDC1551
R20262 T27875 T27879 advmod when,incubated
R20263 T27876 T27877 det the,cells
R20264 T27877 T27879 nsubjpass cells,incubated
R20265 T27878 T27879 auxpass were,incubated
R20266 T27879 T27874 advcl incubated,increased
R20267 T27880 T27879 prep with,incubated
R20268 T27881 T27880 pobj Pam3Cys,with
R20269 T27882 T27881 punct (,Pam3Cys
R20270 T27883 T27881 appos *,Pam3Cys
R20271 T27884 T27885 punct ",",p
R20272 T27885 T27881 appos p,Pam3Cys
R20273 T27886 T27887 compound <,0.05
R20274 T27887 T27885 dobj 0.05,p
R20275 T27888 T27885 punct ),p
R20276 T27889 T27885 cc or,p
R20277 T27890 T27885 conj infected,p
R20278 T27891 T27890 prep with,infected
R20279 T27892 T27891 pobj MTb,with
R20280 T27893 T27892 punct (,MTb
R20281 T27894 T27890 punct **,infected
R20282 T27895 T27898 punct ",",0.01
R20283 T27896 T27898 compound p,0.01
R20284 T27897 T27898 compound <,0.01
R20285 T27898 T27890 npadvmod 0.01,infected
R20286 T27899 T27890 punct ),infected
R20287 T27900 T27885 punct .,p
R20288 T27901 T27904 punct (,MyD88
R20289 T27902 T27904 nmod B,MyD88
R20290 T27903 T27904 punct ),MyD88
R20291 T27904 T27905 nsubj MyD88,is
R20292 T27905 T27905 ROOT is,is
R20293 T27906 T27905 acomp important,is
R20294 T27907 T27905 prep for,is
R20295 T27908 T27909 compound MTb,induction
R20296 T27909 T27907 pobj induction,for
R20297 T27910 T27909 prep of,induction
R20298 T27911 T27913 nummod NFAT5,expression
R20299 T27912 T27913 compound gene,expression
R20300 T27913 T27910 pobj expression,of
R20301 T27914 T27913 prep in,expression
R20302 T27915 T27916 amod human,monocytes
R20303 T27916 T27914 pobj monocytes,in
R20304 T27917 T27905 punct .,is
R20305 T27918 T27919 nummod THP-1,cells
R20306 T27919 T27933 nsubjpass cells,constructed
R20307 T27920 T27922 nsubj that,express
R20308 T27921 T27922 advmod constitutively,express
R20309 T27922 T27919 relcl express,cells
R20310 T27923 T27924 compound lentivirally-delivered,shRNA
R20311 T27924 T27933 nsubjpass shRNA,constructed
R20312 T27925 T27924 acl targeting,shRNA
R20313 T27926 T27925 dobj MyD88,targeting
R20314 T27927 T27925 cc or,targeting
R20315 T27928 T27931 compound control,GFP
R20316 T27929 T27931 compound shRNA,GFP
R20317 T27930 T27931 compound targeting,GFP
R20318 T27931 T27924 conj GFP,shRNA
R20319 T27932 T27933 auxpass were,constructed
R20320 T27933 T27933 ROOT constructed,constructed
R20321 T27934 T27935 mark as,described
R20322 T27935 T27933 advcl described,constructed
R20323 T27936 T27935 prep in,described
R20324 T27937 T27936 pobj Materials,in
R20325 T27938 T27937 cc and,Materials
R20326 T27939 T27937 conj Methods,Materials
R20327 T27940 T27933 punct .,constructed
R20328 T27941 T27943 nsubjpass Cells,infected
R20329 T27942 T27943 auxpass were,infected
R20330 T27943 T27943 ROOT infected,infected
R20331 T27944 T27943 prep with,infected
R20332 T27945 T27946 compound MTb,strain
R20333 T27946 T27947 compound strain,CDC1551
R20334 T27947 T27944 pobj CDC1551,with
R20335 T27948 T27949 punct (,1
R20336 T27949 T27952 nummod 1,cells
R20337 T27950 T27952 nummod ∶,cells
R20338 T27951 T27952 nummod 1,cells
R20339 T27952 T27957 nsubj cells,left
R20340 T27953 T27954 compound ∶,bacilli
R20341 T27954 T27952 appos bacilli,cells
R20342 T27955 T27952 punct ),cells
R20343 T27956 T27952 cc or,cells
R20344 T27957 T27943 advcl left,infected
R20345 T27958 T27957 oprd uninfected,left
R20346 T27959 T27957 prep for,left
R20347 T27960 T27961 nummod 16,hours
R20348 T27961 T27959 pobj hours,for
R20349 T27962 T27957 prep at,left
R20350 T27963 T27964 nummod 37,°
R20351 T27964 T27965 nummod °,C
R20352 T27965 T27962 pobj C,at
R20353 T27966 T27957 punct ",",left
R20354 T27967 T27957 cc and,left
R20355 T27968 T27970 nsubjpass RNA,analyzed
R20356 T27969 T27970 auxpass was,analyzed
R20357 T27970 T27957 conj analyzed,left
R20358 T27971 T27970 punct .,analyzed
R20359 T27972 T27974 nummod NFAT5,levels
R20360 T27973 T27974 compound mRNA,levels
R20361 T27974 T27977 nsubjpass levels,inhibited
R20362 T27975 T27977 auxpass were,inhibited
R20363 T27976 T27977 advmod significantly,inhibited
R20364 T27977 T27977 ROOT inhibited,inhibited
R20365 T27978 T27977 prep in,inhibited
R20366 T27979 T27980 det the,cells
R20367 T27980 T27978 pobj cells,in
R20368 T27981 T27977 conj transduced,inhibited
R20369 T27982 T27981 prep with,transduced
R20370 T27983 T27984 compound MyD88-specific,shRNA
R20371 T27984 T27982 pobj shRNA,with
R20372 T27985 T27987 punct (,bars
R20373 T27986 T27987 amod black,bars
R20374 T27987 T27984 appos bars,shRNA
R20375 T27988 T27981 punct ),transduced
R20376 T27989 T27977 prep compared,inhibited
R20377 T27990 T27989 prep with,compared
R20378 T27991 T27992 det the,cells
R20379 T27992 T27990 pobj cells,with
R20380 T27993 T27992 acl transduced,cells
R20381 T27994 T27993 prep with,transduced
R20382 T27995 T27996 compound control,shRNA
R20383 T27996 T27994 pobj shRNA,with
R20384 T27997 T27996 punct (,shRNA
R20385 T27998 T27999 amod open,bars
R20386 T27999 T27996 appos bars,shRNA
R20387 T28000 T27996 punct ),shRNA
R20388 T28001 T27993 prep in,transduced
R20389 T28002 T28001 pobj both,in
R20390 T28003 T27977 punct ",",inhibited
R20391 T28004 T28005 det the,absence
R20392 T28005 T27977 dobj absence,inhibited
R20393 T28006 T28005 cc or,absence
R20394 T28007 T28005 conj presence,absence
R20395 T28008 T28005 prep of,absence
R20396 T28009 T28010 compound MTb,infection
R20397 T28010 T28008 pobj infection,of
R20398 T28011 T27977 punct .,inhibited
R20399 T28012 T28021 nsubj TNF,are
R20400 T28013 T28012 cc and,TNF
R20401 T28014 T28015 compound CD86,mRNAs
R20402 T28015 T28012 conj mRNAs,TNF
R20403 T28016 T28015 punct ",",mRNAs
R20404 T28017 T28018 det the,expression
R20405 T28018 T28015 appos expression,mRNAs
R20406 T28019 T28018 prep of,expression
R20407 T28020 T28019 pobj which,of
R20408 T28021 T28021 ROOT are,are
R20409 T28022 T28021 acomp MyD88-dependent,are
R20410 T28023 T28021 cc and,are
R20411 T28024 T28034 punct -,measured
R20412 T28025 T28034 advcl independent,measured
R20413 T28026 T28025 punct ",",independent
R20414 T28027 T28025 advmod respectively,independent
R20415 T28028 T28034 punct ",",measured
R20416 T28029 T28034 prep during,measured
R20417 T28030 T28031 compound MTb,infection
R20418 T28031 T28029 pobj infection,during
R20419 T28032 T28034 punct ",",measured
R20420 T28033 T28034 auxpass were,measured
R20421 T28034 T28021 conj measured,are
R20422 T28035 T28034 prep as,measured
R20423 T28036 T28035 pobj controls,as
R20424 T28037 T28034 punct .,measured
R20425 T28038 T28043 punct (,IRAK1
R20426 T28039 T28043 nmod C,IRAK1
R20427 T28040 T28039 punct ",",C
R20428 T28041 T28039 appos D,C
R20429 T28042 T28043 punct ),IRAK1
R20430 T28043 T28047 nsubjpass IRAK1,required
R20431 T28044 T28043 cc and,IRAK1
R20432 T28045 T28043 conj TRAF6,IRAK1
R20433 T28046 T28047 auxpass are,required
R20434 T28047 T28047 ROOT required,required
R20435 T28048 T28047 prep for,required
R20436 T28049 T28050 compound MTb,induction
R20437 T28050 T28048 pobj induction,for
R20438 T28051 T28050 prep of,induction
R20439 T28052 T28054 nummod NFAT5,expression
R20440 T28053 T28054 compound gene,expression
R20441 T28054 T28051 pobj expression,of
R20442 T28055 T28050 prep in,induction
R20443 T28056 T28057 amod human,monocytes
R20444 T28057 T28055 pobj monocytes,in
R20445 T28058 T28047 punct .,required
R20446 T28059 T28060 nummod THP-1,cells
R20447 T28060 T28071 nsubjpass cells,constructed
R20448 T28061 T28063 nsubj that,express
R20449 T28062 T28063 advmod constitutively,express
R20450 T28063 T28060 relcl express,cells
R20451 T28064 T28065 compound lentivirally-delivered,IRAK1
R20452 T28065 T28063 dobj IRAK1,express
R20453 T28066 T28065 punct -,IRAK1
R20454 T28067 T28065 cc or,IRAK1
R20455 T28068 T28069 amod TRAF6-specific,shRNA
R20456 T28069 T28071 nsubjpass shRNA,constructed
R20457 T28070 T28071 auxpass were,constructed
R20458 T28071 T28071 ROOT constructed,constructed
R20459 T28072 T28073 mark as,described
R20460 T28073 T28071 advcl described,constructed
R20461 T28074 T28073 prep in,described
R20462 T28075 T28074 pobj Materials,in
R20463 T28076 T28075 cc and,Materials
R20464 T28077 T28075 conj Methods,Materials
R20465 T28078 T28071 punct .,constructed
R20466 T28079 T28080 nummod THP-1,cells
R20467 T28080 T28085 nsubjpass cells,used
R20468 T28081 T28080 acl expressing,cells
R20469 T28082 T28083 compound control,shRNA
R20470 T28083 T28081 dobj shRNA,expressing
R20471 T28084 T28085 auxpass were,used
R20472 T28085 T28085 ROOT used,used
R20473 T28086 T28087 mark as,described
R20474 T28087 T28085 advcl described,used
R20475 T28088 T28087 prep in,described
R20476 T28089 T28088 pobj 7B,in
R20477 T28090 T28085 punct .,used
R20478 T28091 T28093 nsubjpass Cells,infected
R20479 T28092 T28093 auxpass were,infected
R20480 T28093 T28093 ROOT infected,infected
R20481 T28094 T28093 prep with,infected
R20482 T28095 T28096 compound MTb,strain
R20483 T28096 T28094 pobj strain,with
R20484 T28097 T28096 nummod CDC1551,strain
R20485 T28098 T28093 cc or,infected
R20486 T28099 T28093 conj left,infected
R20487 T28100 T28099 oprd uninfected,left
R20488 T28101 T28099 prep for,left
R20489 T28102 T28103 nummod 16,hours
R20490 T28103 T28101 pobj hours,for
R20491 T28104 T28099 prep at,left
R20492 T28105 T28106 nummod 37,°
R20493 T28106 T28107 nummod °,C
R20494 T28107 T28104 pobj C,at
R20495 T28108 T28099 punct ",",left
R20496 T28109 T28099 cc and,left
R20497 T28110 T28112 nsubjpass RNA,analyzed
R20498 T28111 T28112 auxpass was,analyzed
R20499 T28112 T28099 conj analyzed,left
R20500 T28113 T28112 punct .,analyzed
R20501 T28114 T28115 nummod NFAT5,expression
R20502 T28115 T28118 nsubjpass expression,inhibited
R20503 T28116 T28118 auxpass was,inhibited
R20504 T28117 T28118 advmod significantly,inhibited
R20505 T28118 T28118 ROOT inhibited,inhibited
R20506 T28119 T28118 prep in,inhibited
R20507 T28120 T28122 det the,cells
R20508 T28121 T28122 amod MTb-infected,cells
R20548 T28161 T28159 conj TRAF6,IRAK1
R20549 T28162 T28164 aux to,induced
R20550 T28163 T28164 auxpass be,induced
R20551 T28164 T28158 xcomp induced,require
R20552 T28165 T28164 agent by,induced
R20553 T28166 T28167 compound PRR,activation
R20554 T28167 T28165 pobj activation,by
R20555 T28168 T28170 punct ",",measured
R20556 T28169 T28170 auxpass were,measured
R20557 T28170 T28158 conj measured,require
R20558 T28171 T28170 prep as,measured
R20559 T28172 T28171 pobj controls,as
R20560 T28173 T28158 punct .,require
R20561 T28174 T28177 punct (,p
R20562 T28175 T28177 punct *,p
R20563 T28176 T28177 punct ",",p
R20564 T28177 T28177 ROOT p,p
R20565 T28178 T28177 advmod <,p
R20566 T28179 T28177 npadvmod 0.05,p
R20567 T28180 T28186 punct ;,)
R20568 T28181 T28186 punct **,)
R20569 T28182 T28186 punct ",",)
R20570 T28183 T28186 nmod p,)
R20571 T28184 T28185 compound <,0.01
R20572 T28185 T28183 npadvmod 0.01,p
R20573 T28186 T28177 punct ),p
R20574 T28187 T28177 punct .,p
R20232 T27845 T27842 pobj CDC1551,with
R20233 T27846 T27847 punct (,1
R20234 T27847 T27850 nummod 1,cells
R20235 T27848 T27850 nummod ∶,cells
R20236 T27849 T27850 nummod 1,cells
R20237 T27850 T27856 nsubj cells,left
R20238 T27851 T27852 compound ∶,bacilli
R20239 T27852 T27850 appos bacilli,cells
R20240 T27853 T27850 punct ),cells
R20241 T27854 T27850 punct ",",cells
R20242 T27855 T27850 cc or,cells
R20243 T27856 T27828 conj left,incubated
R20244 T27857 T27856 oprd untreated,left
R20245 T27858 T27856 punct .,left
R20246 T27859 T27867 prep After,measured
R20247 T27860 T27861 nummod 16,hours
R20248 T27861 T27859 pobj hours,After
R20249 T27862 T27867 punct ",",measured
R20250 T27863 T27864 compound NFAT5,mRNA
R20251 T27864 T27865 compound mRNA,levels
R20252 T27865 T27867 nsubjpass levels,measured
R20253 T27866 T27867 auxpass were,measured
R20254 T27867 T27867 ROOT measured,measured
R20255 T27868 T27867 punct .,measured
R20256 T27869 T27871 nummod NFAT5,expression
R20257 T27870 T27871 compound mRNA,expression
R20258 T27871 T27874 nsubjpass expression,increased
R20259 T27872 T27874 auxpass was,increased
R20260 T27873 T27874 advmod significantly,increased
R20261 T27874 T27874 ROOT increased,increased
R20509 T28122 T28119 pobj cells,in
R20510 T28123 T28122 acl expressing,cells
R20511 T28124 T28139 preconj either,compared
R20512 T28125 T28139 nsubj IRAK1,compared
R20513 T28126 T28125 punct (,IRAK1
R20514 T28127 T28125 appos C,IRAK1
R20515 T28128 T28125 punct ),IRAK1
R20516 T28129 T28125 cc or,IRAK1
R20517 T28130 T28125 conj TRAF6,IRAK1
R20518 T28131 T28134 punct (,shRNA
R20519 T28132 T28134 nmod D,shRNA
R20520 T28133 T28134 punct ),shRNA
R20521 T28134 T28134 ROOT shRNA,shRNA
R20522 T28135 T28137 punct (,bars
R20523 T28136 T28137 amod black,bars
R20524 T28137 T28134 appos bars,shRNA
R20525 T28138 T28134 punct ),shRNA
R20526 T28139 T28118 conj compared,inhibited
R20527 T28140 T28139 prep to,compared
R20528 T28141 T28140 pobj cells,to
R20529 T28142 T28141 acl expressing,cells
R20530 T28143 T28144 compound control,shRNA
R20531 T28144 T28142 dobj shRNA,expressing
R20532 T28145 T28144 punct (,shRNA
R20533 T28146 T28147 amod open,bars
R20534 T28147 T28144 appos bars,shRNA
R20535 T28148 T28144 punct ),shRNA
R20536 T28149 T28118 punct .,inhibited
R20537 T28150 T28158 nsubj TNF,require
R20538 T28151 T28150 cc and,TNF
R20539 T28152 T28153 compound CD86,mRNAs
R20540 T28153 T28150 conj mRNAs,TNF
R20541 T28154 T28153 punct ",",mRNAs
R20542 T28155 T28158 nsubj both,require
R20543 T28156 T28155 prep of,both
R20544 T28157 T28156 pobj which,of
R20545 T28158 T28158 ROOT require,require
R20546 T28159 T28158 dobj IRAK1,require
R20547 T28160 T28159 cc and,IRAK1
R11848 T16169 T16166 dobj mechanisms,decipher
R11849 T16170 T16169 acl underlying,mechanisms
R11850 T16171 T16175 amod NFAT5-dependent,replication
R11851 T16172 T16175 punct ",",replication
R11852 T16173 T16175 amod MTb-induced,replication
R11853 T16174 T16175 compound HIV-1,replication
R11854 T16175 T16170 dobj replication,underlying
R11855 T16176 T16179 punct ",",investigated
R11856 T16177 T16179 nsubj we,investigated
R11857 T16178 T16179 advmod next,investigated
R11859 T16180 T16181 det the,requirement
R11860 T16181 T16179 dobj requirement,investigated
R11861 T16182 T16181 prep for,requirement
R11862 T16183 T16185 amod specific,molecules
R11863 T16184 T16185 amod signaling,molecules
R11864 T16185 T16182 pobj molecules,for
R11865 T16186 T16185 prep in,molecules
R11866 T16187 T16189 det the,pathway
R11867 T16188 T16189 compound TLR,pathway
R11868 T16189 T16186 pobj pathway,in
R11869 T16190 T16192 nsubjpass that,required
R11870 T16191 T16192 auxpass are,required
R11871 T16192 T16185 relcl required,molecules
R11872 T16193 T16192 prep for,required
R11873 T16194 T16195 compound MTb,stimulation
R11874 T16195 T16193 pobj stimulation,for
R11875 T16196 T16195 prep of,stimulation
R11876 T16197 T16199 nummod NFAT5,expression
R11877 T16198 T16199 compound gene,expression
R11878 T16199 T16196 pobj expression,of
R11879 T16200 T16179 punct .,investigated
R11880 T16201 T16202 nsubj We,began
R11883 T16204 T16203 pcomp examining,by
R11884 T16205 T16206 det the,requirement
R11885 T16206 T16204 dobj requirement,examining
R11886 T16207 T16206 prep of,requirement
R11887 T16208 T16209 nummod TLR2,ligation
R11888 T16209 T16207 pobj ligation,of
R11890 T16211 T16210 pcomp enhancing,in

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T27737 2951-2958 Positive_regulation denotes require
T27736 2951-2958 Positive_regulation denotes require
T27735 2992-2995 Protein denotes PRR
T27734 2969-2974 Protein denotes TRAF6
T27733 2959-2964 Protein denotes IRAK1
T27732 2925-2935 Protein denotes CD86 mRNAs
T27731 2917-2920 Protein denotes TNF
T27730 2801-2811 Gene_expression denotes expressing
T27729 2801-2811 Gene_expression denotes expressing
T27728 2765-2774 Negative_regulation denotes inhibited
T27727 2736-2746 Gene_expression denotes expression
T27726 2832-2837 Protein denotes TRAF6
T27725 2819-2824 Protein denotes IRAK1
T27724 2730-2735 Protein denotes NFAT5
T27723 2438-2445 Gene_expression denotes express
T27722 2479-2484 Protein denotes TRAF6
T27721 2469-2474 Protein denotes IRAK1
T27720 2334-2342 Positive_regulation denotes required
T27719 2334-2342 Positive_regulation denotes required
T27718 2351-2360 Positive_regulation denotes induction
T27717 2375-2385 Gene_expression denotes expression
T27716 2364-2374 Protein denotes NFAT5 gene
T27715 2324-2329 Protein denotes TRAF6
T27714 2314-2319 Protein denotes IRAK1
T27713 2216-2225 Positive_regulation denotes dependent
T27712 2216-2225 Positive_regulation denotes dependent
T27711 2186-2196 Gene_expression denotes expression
T27710 2186-2196 Gene_expression denotes expression
T27709 2210-2215 Protein denotes MyD88
T27708 2170-2180 Protein denotes CD86 mRNAs
T27707 2162-2165 Protein denotes TNF
T27706 1972-1981 Negative_regulation denotes inhibited
T27705 2011-2016 Protein denotes MyD88
T27704 1935-1945 Protein denotes NFAT5 mRNA
T27703 1668-1675 Gene_expression denotes express
T27702 1668-1675 Gene_expression denotes express
T27701 1748-1751 Protein denotes GFP
T27700 1715-1720 Protein denotes MyD88
T27699 1581-1590 Positive_regulation denotes induction
T27698 1605-1615 Gene_expression denotes expression
T27697 1594-1604 Protein denotes NFAT5 gene
T27696 1554-1559 Protein denotes MyD88
T27695 1450-1459 Positive_regulation denotes increased
T27694 1421-1431 Gene_expression denotes expression
T27693 1410-1420 Protein denotes NFAT5 mRNA
T27692 1377-1387 Protein denotes NFAT5 mRNA
T27691 1168-1176 Positive_regulation denotes enhances
T27690 1188-1197 Gene_expression denotes synthesis
T27689 1177-1187 Protein denotes NFAT5 mRNA
T27688 1081-1090 Positive_regulation denotes induction
T27687 1100-1110 Gene_expression denotes expression
T27686 1094-1099 Protein denotes NFAT5
T27685 1027-1032 Protein denotes MyD88
T16047 5107-5115 Positive_regulation denotes requires
T16046 5044-5056 Positive_regulation denotes upregulation
T16045 5116-5126 Positive_regulation denotes activation
T16044 5071-5081 Gene_expression denotes expression
T16043 5189-5194 Protein denotes TRAF6
T16042 5179-5184 Protein denotes IRAK1
T16041 5144-5149 Protein denotes MyD88
T16040 5130-5135 Protein denotes MyD88
T16039 5060-5070 Protein denotes NFAT5 gene
T16038 4831-4838 Negative_regulation denotes reduced
T16037 4831-4838 Negative_regulation denotes reduced
T16036 4771-4781 Negative_regulation denotes abrogation
T16035 4771-4781 Negative_regulation denotes abrogation
T16034 4930-4941 Positive_regulation denotes independent
T16033 4909-4918 Positive_regulation denotes dependent
T16032 4878-4888 Gene_expression denotes expression
T16031 4806-4816 Gene_expression denotes expression
T16030 4806-4816 Gene_expression denotes expression
T16029 4742-4748 Positive_regulation denotes depend
T16028 4723-4733 Gene_expression denotes expression
T16027 4924-4929 Protein denotes MyD88
T16026 4903-4908 Protein denotes TRAF6
T16025 4892-4897 Protein denotes IRAK1
T16024 4873-4877 Protein denotes CD86
T16023 4839-4848 Protein denotes CD86 mRNA
T16022 4795-4805 Protein denotes TRAF6 gene
T16021 4785-4790 Protein denotes IRAK1
T16020 4752-4757 Protein denotes MyD88
T16019 4713-4722 Protein denotes CD86 gene
T16018 4605-4609 Positive_regulation denotes role
T16017 4605-4609 Positive_regulation denotes role
T16016 4562-4569 Negative_regulation denotes reduced
T16015 4507-4518 Positive_regulation denotes MTb-induced
T16014 4642-4652 Gene_expression denotes expression
T16013 4528-4538 Gene_expression denotes expression
T16012 4633-4641 Protein denotes TNF gene
T16011 4624-4629 Protein denotes TRAF6
T16010 4614-4619 Protein denotes IRAK1
T16009 4519-4527 Protein denotes TNF gene
T16008 4453-4462 Negative_regulation denotes inhibited
T16007 4453-4462 Negative_regulation denotes inhibited
T16006 4467-4474 Positive_regulation denotes induced
T16005 4405-4414 Negative_regulation denotes knockdown
T16004 4405-4414 Negative_regulation denotes knockdown
T16003 4475-4485 Protein denotes NFAT5 mRNA
T16002 4433-4438 Protein denotes TRAF6
T16001 4423-4428 Protein denotes IRAK1
T16000 4188-4200 Positive_regulation denotes upregulation
T15999 4210-4223 Transcription denotes transcription
T15998 4367-4372 Protein denotes MyD88
T15997 4322-4327 Protein denotes TRAF6
T15996 4313-4318 Protein denotes IRAK1
T15995 4204-4209 Protein denotes NFAT5
T15994 4122-4131 Positive_regulation denotes dependent
T15993 4099-4109 Regulation denotes regulation
T15992 4137-4142 Protein denotes MyD88
T15991 4113-4118 Protein denotes NFAT5
T15990 4002-4011 Negative_regulation denotes inhibited
T15989 4061-4067 Regulation denotes impact
T15988 4012-4023 Positive_regulation denotes MTb-induced
T15987 4002-4011 Negative_regulation denotes inhibited
T15986 4002-4011 Negative_regulation denotes inhibited
T15985 3970-3979 Negative_regulation denotes knockdown
T15984 4071-4080 Protein denotes CD86 mRNA
T15983 4034-4042 Protein denotes TNF mRNA
T15982 4024-4029 Protein denotes NFAT5
T15981 3983-3988 Protein denotes MyD88
T15980 3907-3912 Protein denotes MyD88
T15979 3835-3843 Protein denotes TNF mRNA
T15978 3762-3767 Protein denotes MyD88
T15977 3753-3756 Protein denotes TNF
T15976 3650-3659 Negative_regulation denotes knockdown
T15975 3714-3724 Protein denotes NFAT5 mRNA
T15974 3644-3649 Protein denotes MyD88
T15973 3591-3601 Gene_expression denotes expressing
T15972 3517-3524 Negative_regulation denotes reduced
T15971 3610-3613 Protein denotes GFP
T15970 3446-3456 Protein denotes MyD88 mRNA
T15969 3242-3251 Positive_regulation denotes induction
T15968 3266-3276 Gene_expression denotes expression
T15967 3398-3403 Protein denotes MyD88
T15966 3255-3265 Protein denotes NFAT5 gene
T15963 3081-3086 Protein denotes MyD88
T15962 907-917 Positive_regulation denotes augmenting
T15961 934-940 Regulation denotes effect
T15960 955-965 Gene_expression denotes expression
T15959 756-764 Positive_regulation denotes enhanced
T15958 944-954 Protein denotes NFAT5 gene
T15957 765-775 Protein denotes NFAT5 mRNA
T15956 540-549 Positive_regulation denotes increased
T15955 503-513 Protein denotes NFAT5 mRNA
T15954 391-400 Positive_regulation denotes enhancing
T15953 379-387 Binding denotes ligation
T15952 401-411 Protein denotes NFAT5 mRNA
T15951 374-378 Protein denotes TLR2
T15950 321-331 Gene_expression denotes expression
T15949 310-320 Protein denotes NFAT5 gene
T15948 257-260 Protein denotes TLR
T15947 132-137 Protein denotes NFAT5
T15944 42-47 Protein denotes MyD88
T15965 3115-3123 Binding denotes ligation
T15964 3110-3114 Protein denotes TLR2
T27739 2981-2988 Positive_regulation denotes induced
T27738 2996-3006 Positive_regulation denotes activation
R11698 T15949 T15950 themeOf NFAT5 gene,expression
R11699 T15951 T15953 themeOf TLR2,ligation
R11700 T15952 T15954 themeOf NFAT5 mRNA,enhancing
R11701 T15955 T15956 themeOf NFAT5 mRNA,increased
R11702 T15957 T15959 themeOf NFAT5 mRNA,enhanced
R11703 T15958 T15960 themeOf NFAT5 gene,expression
R11704 T15960 T15961 themeOf expression,effect
R11705 T15961 T15962 themeOf effect,augmenting
R11706 T15963 T15965 themeOf MyD88,ligation
R11707 T15964 T15965 themeOf TLR2,ligation
R11708 T15966 T15968 themeOf NFAT5 gene,expression
R11709 T15968 T15969 themeOf expression,induction
R11710 T15970 T15972 themeOf MyD88 mRNA,reduced
R11711 T15971 T15973 themeOf GFP,expressing
R11712 T15974 T15976 themeOf MyD88,knockdown
R11713 T15981 T15985 themeOf MyD88,knockdown
R11714 T15982 T15986 themeOf NFAT5,inhibited
R11715 T15982 T15988 themeOf NFAT5,MTb-induced
R11716 T15983 T15987 themeOf TNF mRNA,inhibited
R11717 T15984 T15989 themeOf CD86 mRNA,impact
R11718 T15985 T15986 causeOf knockdown,inhibited
R11719 T15985 T15987 causeOf knockdown,inhibited
R11720 T15985 T15989 causeOf knockdown,impact
R11721 T15985 T15990 causeOf knockdown,inhibited
R11722 T15988 T15990 themeOf MTb-induced,inhibited
R11723 T15991 T15993 themeOf NFAT5,regulation
R11724 T15992 T15994 causeOf MyD88,dependent
R11725 T15993 T15994 themeOf regulation,dependent
R11726 T15995 T15999 themeOf NFAT5,transcription
R11727 T15999 T16000 themeOf transcription,upregulation
R11728 T16001 T16004 themeOf IRAK1,knockdown
R11729 T16002 T16005 themeOf TRAF6,knockdown
R11730 T16003 T16006 themeOf NFAT5 mRNA,induced
R11731 T16004 T16007 causeOf knockdown,inhibited
R11732 T16005 T16008 causeOf knockdown,inhibited
R11733 T16006 T16007 themeOf induced,inhibited
R11734 T16006 T16008 themeOf induced,inhibited
R11735 T16009 T16013 themeOf TNF gene,expression
R11736 T16010 T16017 causeOf IRAK1,role
R11737 T16011 T16018 causeOf TRAF6,role
R11738 T16012 T16014 themeOf TNF gene,expression
R11739 T16013 T16015 themeOf expression,MTb-induced
R11740 T16014 T16017 themeOf expression,role
R11741 T16014 T16018 themeOf expression,role
R11742 T16015 T16016 themeOf MTb-induced,reduced
R11743 T16019 T16028 themeOf CD86 gene,expression
R11744 T16020 T16029 causeOf MyD88,depend
R11745 T16021 T16030 themeOf IRAK1,expression
R11746 T16022 T16031 themeOf TRAF6 gene,expression
R11747 T16023 T16037 themeOf CD86 mRNA,reduced
R11748 T16023 T16038 themeOf CD86 mRNA,reduced
R11749 T16024 T16032 themeOf CD86,expression
R11750 T16026 T16033 causeOf TRAF6,dependent
R11751 T16027 T16034 causeOf MyD88,independent
R11752 T16028 T16029 themeOf expression,depend
R11753 T16030 T16035 themeOf expression,abrogation
R11754 T16031 T16036 themeOf expression,abrogation
R11755 T16032 T16033 themeOf expression,dependent
R11756 T16032 T16034 themeOf expression,independent
R11757 T16035 T16037 causeOf abrogation,reduced
R11758 T16036 T16038 causeOf abrogation,reduced
R11759 T16039 T16044 themeOf NFAT5 gene,expression
R11760 T16040 T16045 themeOf MyD88,activation
R20118 T27686 T27687 themeOf NFAT5,expression
R20119 T27687 T27688 themeOf expression,induction
R20120 T27689 T27690 themeOf NFAT5 mRNA,synthesis
R20121 T27690 T27691 themeOf synthesis,enhances
R20122 T27693 T27694 themeOf NFAT5 mRNA,expression
R20123 T27694 T27695 themeOf expression,increased
R20124 T27697 T27698 themeOf NFAT5 gene,expression
R20125 T27698 T27699 themeOf expression,induction
R20126 T27700 T27702 themeOf MyD88,express
R20127 T27701 T27703 themeOf GFP,express
R20128 T27704 T27706 themeOf NFAT5 mRNA,inhibited
R20129 T27707 T27710 themeOf TNF,expression
R20130 T27708 T27711 themeOf CD86 mRNAs,expression
R20131 T27709 T27712 causeOf MyD88,dependent
R20132 T27709 T27713 causeOf MyD88,dependent
R20133 T27710 T27712 themeOf expression,dependent
R20134 T27711 T27713 themeOf expression,dependent
R20135 T27714 T27719 causeOf IRAK1,required
R20136 T27715 T27720 causeOf TRAF6,required
R20137 T27716 T27717 themeOf NFAT5 gene,expression
R20138 T27717 T27718 themeOf expression,induction
R20139 T27718 T27719 themeOf induction,required
R20140 T27718 T27720 themeOf induction,required
R20141 T27721 T27723 themeOf IRAK1,express
R20142 T27724 T27727 themeOf NFAT5,expression
R20143 T27725 T27729 themeOf IRAK1,expressing
R20144 T27726 T27730 themeOf TRAF6,expressing
R20145 T27727 T27728 themeOf expression,inhibited
R20146 T27733 T27736 themeOf IRAK1,require
R20147 T27734 T27737 themeOf TRAF6,require
R20148 T27735 T27738 themeOf PRR,activation
R20149 T27738 T27739 themeOf activation,induced
R11761 T16044 T16046 themeOf expression,upregulation
R11762 T16045 T16047 themeOf activation,requires
R11763 T16046 T16047 causeOf upregulation,requires

testone

Id Subject Object Predicate Lexical cue
T26880 2981-2988 Positive_regulation denotes induced
T26879 2930-2935 Transcription denotes mRNAs
T26878 2801-2811 Gene_expression denotes expressing
T26877 2765-2774 Negative_regulation denotes inhibited
T26876 2736-2746 Gene_expression denotes expression
T26875 2438-2445 Gene_expression denotes express
T26874 2375-2385 Gene_expression denotes expression
T26873 2351-2360 Positive_regulation denotes induction
T26872 1605-1615 Gene_expression denotes expression
T26871 1581-1590 Positive_regulation denotes induction
T26870 1416-1431 Transcription denotes mRNA expression
T26869 1168-1176 Positive_regulation denotes enhances
T26868 1135-1145 Binding denotes Engagement
T26867 1100-1110 Gene_expression denotes expression
T26866 1081-1090 Positive_regulation denotes induction
T26865 2969-2974 Protein denotes TRAF6
T26864 2959-2964 Protein denotes IRAK1
T26863 2925-2929 Protein denotes CD86
T26862 2917-2920 Protein denotes TNF
T26861 2898-2903 Protein denotes shRNA
T26860 2832-2837 Protein denotes TRAF6
T26859 2819-2824 Protein denotes IRAK1
T26858 2730-2735 Protein denotes NFAT5
T26857 2587-2592 Protein denotes shRNA
T26856 2479-2484 Protein denotes TRAF6
T26855 2469-2474 Protein denotes IRAK1
T26854 2364-2369 Protein denotes NFAT5
T26853 2324-2329 Protein denotes TRAF6
T26852 2314-2319 Protein denotes IRAK1
T26851 2210-2215 Protein denotes MyD88
T26850 2170-2174 Protein denotes CD86
T26849 2162-2165 Protein denotes TNF
T26848 2011-2016 Protein denotes MyD88
T26847 1935-1940 Protein denotes NFAT5
T26846 1748-1751 Protein denotes GFP
T26845 1715-1720 Protein denotes MyD88
T26844 1594-1599 Protein denotes NFAT5
T26843 1554-1559 Protein denotes MyD88
T26842 1410-1415 Protein denotes NFAT5
T26841 1377-1382 Protein denotes NFAT5
T26840 1248-1252 Protein denotes TLR2
T26839 1177-1182 Protein denotes NFAT5
T26838 1149-1153 Protein denotes TLR2
T26837 1094-1099 Protein denotes NFAT5
T26836 1027-1032 Protein denotes MyD88
T14629 5150-5160 Binding denotes associated
T14628 5116-5126 Positive_regulation denotes activation
T14627 5107-5115 Positive_regulation denotes requires
T14626 5071-5081 Gene_expression denotes expression
T14625 5044-5056 Positive_regulation denotes upregulation
T14624 4878-4888 Gene_expression denotes expression
T14623 4831-4838 Negative_regulation denotes reduced
T14622 4806-4816 Gene_expression denotes expression
T14621 4771-4781 Negative_regulation denotes abrogation
T14620 4723-4733 Gene_expression denotes expression
T14619 4642-4652 Gene_expression denotes expression
T14618 4605-4609 Regulation denotes role
T14617 4562-4569 Negative_regulation denotes reduced
T14616 4528-4538 Gene_expression denotes expression
T14615 4511-4518 Positive_regulation denotes induced
T14614 4467-4474 Positive_regulation denotes induced
T14613 4453-4462 Negative_regulation denotes inhibited
T14612 4405-4414 Negative_regulation denotes knockdown
T14611 4188-4200 Positive_regulation denotes upregulation
T14610 4099-4109 Regulation denotes regulation
T14609 4061-4067 Regulation denotes impact
T14608 4016-4023 Positive_regulation denotes induced
T14607 4002-4011 Negative_regulation denotes inhibited
T14606 3970-3979 Negative_regulation denotes knockdown
T14605 3650-3659 Negative_regulation denotes knockdown
T14604 3517-3524 Negative_regulation denotes reduced
T14603 3266-3276 Gene_expression denotes expression
T14602 3242-3251 Positive_regulation denotes induction
T14601 3115-3123 Binding denotes ligation
T14600 756-764 Positive_regulation denotes enhanced
T14599 379-387 Binding denotes ligation
T14598 359-370 Positive_regulation denotes requirement
T14597 321-331 Gene_expression denotes expression
T14595 5189-5194 Protein denotes TRAF6
T14594 5179-5184 Protein denotes IRAK1
T14593 5144-5149 Protein denotes MyD88
T14592 5130-5135 Protein denotes MyD88
T14591 5060-5065 Protein denotes NFAT5
T14590 4924-4929 Protein denotes MyD88
T14589 4903-4908 Protein denotes TRAF6
T14588 4892-4897 Protein denotes IRAK1
T14587 4873-4877 Protein denotes CD86
T14586 4839-4843 Protein denotes CD86
T14585 4795-4800 Protein denotes TRAF6
T14584 4785-4790 Protein denotes IRAK1
T14583 4752-4757 Protein denotes MyD88
T14582 4713-4717 Protein denotes CD86
T14581 4633-4636 Protein denotes TNF
T14580 4624-4629 Protein denotes TRAF6
T14579 4614-4619 Protein denotes IRAK1
T14578 4519-4522 Protein denotes TNF
T14577 4475-4480 Protein denotes NFAT5
T14576 4433-4438 Protein denotes TRAF6
T14575 4423-4428 Protein denotes IRAK1
T14574 4367-4372 Protein denotes MyD88
T14573 4322-4327 Protein denotes TRAF6
T14572 4313-4318 Protein denotes IRAK1
T14571 4204-4209 Protein denotes NFAT5
T14570 4137-4142 Protein denotes MyD88
T14569 4113-4118 Protein denotes NFAT5
T14568 4071-4075 Protein denotes CD86
T14567 4034-4037 Protein denotes TNF
T14566 4024-4029 Protein denotes NFAT5
T14565 3983-3988 Protein denotes MyD88
T14564 3930-3934 Protein denotes CD86
T14563 3907-3912 Protein denotes MyD88
T14562 3835-3838 Protein denotes TNF
T14561 3762-3767 Protein denotes MyD88
T14560 3753-3756 Protein denotes TNF
T14559 3714-3719 Protein denotes NFAT5
T14558 3644-3649 Protein denotes MyD88
T14557 3610-3619 Protein denotes GFP shRNA
T14556 3446-3451 Protein denotes MyD88
T14555 3398-3403 Protein denotes MyD88
T14554 3366-3387 Protein denotes short hairpin (sh)RNA
T14553 3255-3260 Protein denotes NFAT5
T14552 3110-3114 Protein denotes TLR2
T14551 3081-3086 Protein denotes MyD88
T14550 944-949 Protein denotes NFAT5
T14549 765-770 Protein denotes NFAT5
T14548 503-508 Protein denotes NFAT5
T14547 459-463 Protein denotes TLR2
T14546 401-406 Protein denotes NFAT5
T14545 374-378 Protein denotes TLR2
T14544 310-315 Protein denotes NFAT5
T14543 132-137 Protein denotes NFAT5
T14542 42-47 Protein denotes MyD88
R19571 T26868 T26869 causeOf Engagement,enhances
R19572 T26872 T26871 themeOf expression,induction
R19573 T26874 T26873 themeOf expression,induction
R19574 T26876 T26877 themeOf expression,inhibited
R19575 T26878 T26877 themeOf expressing,inhibited
R10812 T14544 T14597 themeOf NFAT5,expression
R10813 T14545 T14599 themeOf TLR2,ligation
R10814 T14549 T14600 themeOf NFAT5,enhanced
R10815 T14552 T14601 themeOf TLR2,ligation
R10816 T14553 T14603 themeOf NFAT5,expression
R10817 T14556 T14604 themeOf MyD88,reduced
R10818 T14558 T14605 themeOf MyD88,knockdown
R10819 T14559 T14605 themeOf NFAT5,knockdown
R10820 T14565 T14606 themeOf MyD88,knockdown
R10821 T14566 T14608 themeOf NFAT5,induced
R10822 T14567 T14608 themeOf TNF,induced
R10823 T14569 T14610 themeOf NFAT5,regulation
R10824 T14575 T14612 themeOf IRAK1,knockdown
R10825 T14576 T14612 themeOf TRAF6,knockdown
R10826 T14577 T14614 themeOf NFAT5,induced
R10827 T14578 T14616 themeOf TNF,expression
R10828 T14579 T14619 themeOf IRAK1,expression
R10829 T14581 T14619 themeOf TNF,expression
R10830 T14582 T14620 themeOf CD86,expression
R10831 T14584 T14622 themeOf IRAK1,expression
R10832 T14585 T14622 themeOf TRAF6,expression
R10833 T14586 T14623 themeOf CD86,reduced
R10834 T14587 T14624 themeOf CD86,expression
R10835 T14591 T14626 themeOf NFAT5,expression
R10836 T14592 T14628 themeOf MyD88,activation
R10837 T14593 T14629 themeOf MyD88,associated
R10838 T14594 T14628 themeOf IRAK1,activation
R10839 T14595 T14628 themeOf TRAF6,activation
R10840 T14599 T14598 themeOf ligation,requirement
R10841 T14603 T14602 themeOf expression,induction
R10842 T14606 T14607 causeOf knockdown,inhibited
R10843 T14608 T14607 themeOf induced,inhibited
R10844 T14612 T14613 causeOf knockdown,inhibited
R10845 T14614 T14613 themeOf induced,inhibited
R10846 T14615 T14617 themeOf induced,reduced
R10847 T14616 T14617 themeOf expression,reduced
R10848 T14616 T14615 themeOf expression,induced
R10849 T14619 T14618 themeOf expression,role
R10850 T14620 T14621 causeOf expression,abrogation
R10851 T14622 T14621 themeOf expression,abrogation
R10852 T14626 T14625 themeOf expression,upregulation
R19553 T26837 T26867 themeOf NFAT5,expression
R19554 T26838 T26868 themeOf TLR2,Engagement
R19555 T26842 T26870 themeOf NFAT5,mRNA expression
R19556 T26843 T26871 causeOf MyD88,induction
R19557 T26844 T26872 themeOf NFAT5,expression
R19558 T26852 T26873 causeOf IRAK1,induction
R19559 T26854 T26874 themeOf NFAT5,expression
R19560 T26855 T26875 themeOf IRAK1,express
R19561 T26856 T26875 themeOf TRAF6,express
R19562 T26858 T26876 themeOf NFAT5,expression
R19563 T26859 T26878 themeOf IRAK1,expressing
R19564 T26860 T26878 themeOf TRAF6,expressing
R19565 T26861 T26878 themeOf shRNA,expressing
R19566 T26862 T26879 themeOf TNF,mRNAs
R19567 T26863 T26879 themeOf CD86,mRNAs
R19568 T26864 T26880 themeOf IRAK1,induced
R19569 T26865 T26880 themeOf TRAF6,induced
R19570 T26867 T26866 themeOf expression,induction
R19576 T26879 T26880 themeOf mRNAs,induced

test3

Id Subject Object Predicate Lexical cue
T26958 2981-2988 Positive_regulation denotes induced
T26957 2969-2974 Protein denotes TRAF6
T26956 2959-2964 Protein denotes IRAK1
T26955 2925-2929 Protein denotes CD86
T26954 2917-2920 Protein denotes TNF
T26953 2898-2903 Protein denotes shRNA
T26952 2832-2837 Protein denotes TRAF6
T26951 2819-2824 Protein denotes IRAK1
T26950 2801-2811 Gene_expression denotes expressing
T26949 2765-2774 Negative_regulation denotes inhibited
T26948 2736-2746 Gene_expression denotes expression
T26947 2730-2735 Protein denotes NFAT5
T26946 2587-2592 Protein denotes shRNA
T26945 2479-2484 Protein denotes TRAF6
T26944 2469-2474 Protein denotes IRAK1
T26943 2438-2445 Gene_expression denotes express
T26942 2375-2385 Gene_expression denotes expression
T26941 2364-2369 Protein denotes NFAT5
T26940 2351-2360 Positive_regulation denotes induction
T26939 2334-2342 Positive_regulation denotes required
T26938 2324-2329 Protein denotes TRAF6
T26937 2314-2319 Protein denotes IRAK1
T26936 2216-2225 Regulation denotes dependent
T26935 2210-2215 Protein denotes MyD88
T26934 2170-2174 Protein denotes CD86
T26933 2162-2165 Protein denotes TNF
T26932 2011-2016 Protein denotes MyD88
T26931 1935-1940 Protein denotes NFAT5
T26930 1748-1751 Protein denotes GFP
T26929 1715-1720 Protein denotes MyD88
T26928 1605-1615 Gene_expression denotes expression
T26927 1594-1599 Protein denotes NFAT5
T26926 1581-1590 Positive_regulation denotes induction
T26925 1554-1559 Protein denotes MyD88
T26924 1450-1459 Positive_regulation denotes increased
T26923 1416-1431 Transcription denotes mRNA expression
T26922 1410-1415 Protein denotes NFAT5
T26921 1377-1382 Protein denotes NFAT5
T26920 1248-1252 Protein denotes TLR2
T26919 1188-1197 Transcription denotes synthesis
T26918 1183-1187 Transcription denotes mRNA
T26917 1177-1182 Protein denotes NFAT5
T26916 1149-1153 Protein denotes TLR2
T26915 1135-1145 Binding denotes Engagement
T26914 1100-1110 Gene_expression denotes expression
T26913 1094-1099 Protein denotes NFAT5
T26912 1081-1090 Positive_regulation denotes induction
T26911 1027-1032 Protein denotes MyD88
T26910 2969-2974 Protein denotes TRAF6
T26909 2959-2964 Protein denotes IRAK1
T26908 2925-2929 Protein denotes CD86
T26907 2917-2920 Protein denotes TNF
T26906 2898-2903 Protein denotes shRNA
T26905 2832-2837 Protein denotes TRAF6
T26904 2819-2824 Protein denotes IRAK1
T26903 2730-2735 Protein denotes NFAT5
T26902 2587-2592 Protein denotes shRNA
T26901 2479-2484 Protein denotes TRAF6
T26900 2469-2474 Protein denotes IRAK1
T26899 2364-2369 Protein denotes NFAT5
T26898 2324-2329 Protein denotes TRAF6
T26897 2314-2319 Protein denotes IRAK1
T26896 2210-2215 Protein denotes MyD88
T26895 2170-2174 Protein denotes CD86
T26894 2162-2165 Protein denotes TNF
T26893 2011-2016 Protein denotes MyD88
T26892 1935-1940 Protein denotes NFAT5
T26891 1748-1751 Protein denotes GFP
T26890 1715-1720 Protein denotes MyD88
T26889 1594-1599 Protein denotes NFAT5
T26888 1554-1559 Protein denotes MyD88
T26887 1410-1415 Protein denotes NFAT5
T26886 1377-1382 Protein denotes NFAT5
T26885 1248-1252 Protein denotes TLR2
T26884 1177-1182 Protein denotes NFAT5
T26883 1149-1153 Protein denotes TLR2
T26882 1094-1099 Protein denotes NFAT5
T26881 1027-1032 Protein denotes MyD88
T14736 4605-4609 Regulation denotes role
T14735 4562-4569 Negative_regulation denotes reduced
T14734 4528-4538 Gene_expression denotes expression
T14733 4519-4522 Protein denotes TNF
T14732 4511-4518 Positive_regulation denotes induced
T14731 4475-4480 Protein denotes NFAT5
T14730 4453-4462 Negative_regulation denotes inhibited
T14729 4433-4438 Protein denotes TRAF6
T14728 4423-4428 Protein denotes IRAK1
T14727 4405-4414 Negative_regulation denotes knockdown
T14726 4367-4372 Protein denotes MyD88
T14725 4322-4327 Protein denotes TRAF6
T14724 4313-4318 Protein denotes IRAK1
T14723 4204-4209 Protein denotes NFAT5
T14722 4137-4142 Protein denotes MyD88
T14721 4122-4131 Regulation denotes dependent
T14720 4113-4118 Protein denotes NFAT5
T14719 4071-4075 Protein denotes CD86
T14718 4061-4067 Regulation denotes impact
T14717 4034-4037 Protein denotes TNF
T14716 4024-4029 Protein denotes NFAT5
T14715 4016-4023 Positive_regulation denotes induced
T14714 4002-4011 Negative_regulation denotes inhibited
T14713 3983-3988 Protein denotes MyD88
T14712 3970-3979 Negative_regulation denotes knockdown
T14711 3930-3934 Protein denotes CD86
T14710 3907-3912 Protein denotes MyD88
T14709 3835-3838 Protein denotes TNF
T14708 3762-3767 Protein denotes MyD88
T14707 3753-3756 Protein denotes TNF
T14706 3714-3719 Protein denotes NFAT5
T14705 3644-3649 Protein denotes MyD88
T14704 3610-3619 Protein denotes GFP shRNA
T14703 3446-3451 Protein denotes MyD88
T14702 3398-3403 Protein denotes MyD88
T14701 3366-3387 Protein denotes short hairpin (sh)RNA
T14700 3255-3260 Protein denotes NFAT5
T14699 3115-3123 Binding denotes ligation
T14698 3110-3114 Protein denotes TLR2
T14697 3081-3086 Protein denotes MyD88
T14696 944-949 Protein denotes NFAT5
T14695 765-770 Protein denotes NFAT5
T14694 540-549 Positive_regulation denotes increased
T14693 503-508 Protein denotes NFAT5
T14692 459-463 Protein denotes TLR2
T14691 401-406 Protein denotes NFAT5
T14690 379-387 Binding denotes ligation
T14689 374-378 Protein denotes TLR2
T14688 310-315 Protein denotes NFAT5
T14687 132-137 Protein denotes NFAT5
T14686 42-47 Protein denotes MyD88
T14684 5189-5194 Protein denotes TRAF6
T14683 5179-5184 Protein denotes IRAK1
T14682 5144-5149 Protein denotes MyD88
T14681 5130-5135 Protein denotes MyD88
T14680 5060-5065 Protein denotes NFAT5
T14679 4924-4929 Protein denotes MyD88
T14678 4903-4908 Protein denotes TRAF6
T14677 4892-4897 Protein denotes IRAK1
T14676 4873-4877 Protein denotes CD86
T14675 4839-4843 Protein denotes CD86
T14674 4795-4800 Protein denotes TRAF6
T14673 4785-4790 Protein denotes IRAK1
T14672 4752-4757 Protein denotes MyD88
T14671 4713-4717 Protein denotes CD86
T14670 4633-4636 Protein denotes TNF
T14669 4624-4629 Protein denotes TRAF6
T14668 4614-4619 Protein denotes IRAK1
T14667 4519-4522 Protein denotes TNF
T14666 4475-4480 Protein denotes NFAT5
T14665 4433-4438 Protein denotes TRAF6
T14664 4423-4428 Protein denotes IRAK1
T14663 4367-4372 Protein denotes MyD88
T14662 4322-4327 Protein denotes TRAF6
T14661 4313-4318 Protein denotes IRAK1
T14660 4204-4209 Protein denotes NFAT5
T14659 4137-4142 Protein denotes MyD88
T14658 4113-4118 Protein denotes NFAT5
T14657 4071-4075 Protein denotes CD86
T14656 4034-4037 Protein denotes TNF
T14655 4024-4029 Protein denotes NFAT5
T14654 3983-3988 Protein denotes MyD88
T14653 3930-3934 Protein denotes CD86
T14652 3907-3912 Protein denotes MyD88
T14651 3835-3838 Protein denotes TNF
T14650 3762-3767 Protein denotes MyD88
T14649 3753-3756 Protein denotes TNF
T14648 3714-3719 Protein denotes NFAT5
T14647 3644-3649 Protein denotes MyD88
T14646 3610-3619 Protein denotes GFP shRNA
T14645 3446-3451 Protein denotes MyD88
T14644 3398-3403 Protein denotes MyD88
T14643 3366-3387 Protein denotes short hairpin (sh)RNA
T14642 3255-3260 Protein denotes NFAT5
T14641 3110-3114 Protein denotes TLR2
T14640 3081-3086 Protein denotes MyD88
T14639 944-949 Protein denotes NFAT5
T14638 765-770 Protein denotes NFAT5
T14637 503-508 Protein denotes NFAT5
T14636 459-463 Protein denotes TLR2
T14635 401-406 Protein denotes NFAT5
T14634 374-378 Protein denotes TLR2
T14633 310-315 Protein denotes NFAT5
T14632 132-137 Protein denotes NFAT5
T14631 42-47 Protein denotes MyD88
T14765 5189-5194 Protein denotes TRAF6
T14764 5179-5184 Protein denotes IRAK1
T14763 5150-5160 Binding denotes associated
T14762 5144-5149 Protein denotes MyD88
T14761 5130-5135 Protein denotes MyD88
T14760 5116-5126 Positive_regulation denotes activation
T14759 5071-5081 Gene_expression denotes expression
T14758 5060-5065 Protein denotes NFAT5
T14757 5044-5056 Positive_regulation denotes upregulation
T14756 4930-4941 Regulation denotes independent
T14755 4924-4929 Protein denotes MyD88
T14754 4909-4918 Regulation denotes dependent
T14753 4903-4908 Protein denotes TRAF6
T14752 4892-4897 Protein denotes IRAK1
T14751 4878-4888 Gene_expression denotes expression
T14750 4873-4877 Protein denotes CD86
T14749 4839-4843 Protein denotes CD86
T14748 4831-4838 Negative_regulation denotes reduced
T14747 4806-4816 Gene_expression denotes expression
T14746 4795-4800 Protein denotes TRAF6
T14745 4785-4790 Protein denotes IRAK1
T14744 4771-4781 Negative_regulation denotes abrogation
T14743 4752-4757 Protein denotes MyD88
T14742 4723-4733 Gene_expression denotes expression
T14741 4713-4717 Protein denotes CD86
T14740 4642-4652 Gene_expression denotes expression
T14739 4633-4636 Protein denotes TNF
T14738 4624-4629 Protein denotes TRAF6
T14737 4614-4619 Protein denotes IRAK1
R10866 T14737 T14740 themeOf IRAK1,expression
R10867 T14739 T14740 themeOf TNF,expression
R10868 T14741 T14742 themeOf CD86,expression
R10869 T14743 T14744 causeOf MyD88,abrogation
R10870 T14744 T14748 causeOf abrogation,reduced
R10853 T14689 T14690 themeOf TLR2,ligation
R10854 T14693 T14694 themeOf NFAT5,increased
R10855 T14698 T14699 themeOf TLR2,ligation
R10856 T14713 T14712 themeOf MyD88,knockdown
R10857 T14715 T14714 themeOf induced,inhibited
R10858 T14716 T14715 themeOf NFAT5,induced
R10859 T14717 T14715 themeOf TNF,induced
R10860 T14728 T14727 themeOf IRAK1,knockdown
R10861 T14729 T14727 themeOf TRAF6,knockdown
R10862 T14732 T14735 themeOf induced,reduced
R10863 T14733 T14734 themeOf TNF,expression
R10864 T14734 T14735 themeOf expression,reduced
R10865 T14734 T14732 themeOf expression,induced
R10871 T14745 T14747 themeOf IRAK1,expression
R10872 T14746 T14747 themeOf TRAF6,expression
R10873 T14747 T14744 themeOf expression,abrogation
R10874 T14749 T14748 themeOf CD86,reduced
R10875 T14750 T14751 themeOf CD86,expression
R10876 T14751 T14754 themeOf expression,dependent
R10877 T14758 T14759 themeOf NFAT5,expression
R10878 T14759 T14757 themeOf expression,upregulation
R10879 T14761 T14760 themeOf MyD88,activation
R10880 T14761 T14763 themeOf MyD88,associated
R10881 T14762 T14763 themeOf MyD88,associated
R10882 T14764 T14760 themeOf IRAK1,activation
R10883 T14764 T14763 themeOf IRAK1,associated
R10884 T14765 T14760 themeOf TRAF6,activation
R19578 T26914 T26912 themeOf expression,induction
R19579 T26916 T26915 themeOf TLR2,Engagement
R19580 T26922 T26923 themeOf NFAT5,mRNA expression
R19581 T26923 T26924 themeOf mRNA expression,increased
R19582 T26925 T26926 causeOf MyD88,induction
R19583 T26927 T26928 themeOf NFAT5,expression
R19584 T26928 T26926 themeOf expression,induction
R19585 T26937 T26939 causeOf IRAK1,required
R19586 T26938 T26939 causeOf TRAF6,required
R19587 T26940 T26939 themeOf induction,required
R19588 T26941 T26942 themeOf NFAT5,expression
R19589 T26942 T26940 themeOf expression,induction
R19590 T26944 T26943 themeOf IRAK1,express
R19591 T26945 T26943 themeOf TRAF6,express
R19592 T26947 T26948 themeOf NFAT5,expression
R19593 T26948 T26949 themeOf expression,inhibited
R19594 T26950 T26949 causeOf expressing,inhibited
R19595 T26951 T26950 themeOf IRAK1,expressing
R19596 T26951 T26949 causeOf IRAK1,inhibited
R19597 T26952 T26950 themeOf TRAF6,expressing
R19598 T26952 T26949 causeOf TRAF6,inhibited
R19599 T26953 T26950 themeOf shRNA,expressing
R19600 T26953 T26949 causeOf shRNA,inhibited
R19601 T26956 T26958 themeOf IRAK1,induced
R19602 T26957 T26958 themeOf TRAF6,induced
R19577 T26913 T26914 themeOf NFAT5,expression