PMC:3320587 / 4062-4232
Annnotations
2_test
{"project":"2_test","denotations":[{"id":"22496647-8837778-98010779","span":{"begin":121,"end":123},"obj":"8837778"},{"id":"22496647-9734363-98010780","span":{"begin":127,"end":129},"obj":"9734363"},{"id":"22496647-7982981-98010781","span":{"begin":132,"end":134},"obj":"7982981"},{"id":"22496647-21852682-98010782","span":{"begin":150,"end":152},"obj":"21852682"}],"text":"ding the NF-κB and AP-1 families, which have been shown to associate with the HIV-1 LTR and to drive its transcription ([22], [25]–[27], reviewed in [10]).\nNotably, HIV-1"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T1441","span":{"begin":165,"end":170},"obj":"NN"},{"id":"T1440","span":{"begin":163,"end":164},"obj":"-COMMA-"},{"id":"T1439","span":{"begin":156,"end":163},"obj":"RB"},{"id":"T1438","span":{"begin":153,"end":154},"obj":"-RRB-"},{"id":"T1437","span":{"begin":152,"end":153},"obj":"-RRB-"},{"id":"T1436","span":{"begin":150,"end":152},"obj":"CD"},{"id":"T1435","span":{"begin":149,"end":150},"obj":"-LRB-"},{"id":"T1434","span":{"begin":146,"end":148},"obj":"IN"},{"id":"T1433","span":{"begin":137,"end":145},"obj":"VB"},{"id":"T1432","span":{"begin":135,"end":136},"obj":"-COMMA-"},{"id":"T1431","span":{"begin":134,"end":135},"obj":"-RRB-"},{"id":"T1430","span":{"begin":132,"end":134},"obj":"CD"},{"id":"T1429","span":{"begin":131,"end":132},"obj":"-LRB-"},{"id":"T1428","span":{"begin":130,"end":131},"obj":"CD"},{"id":"T1427","span":{"begin":129,"end":130},"obj":"-RRB-"},{"id":"T1426","span":{"begin":127,"end":129},"obj":"CD"},{"id":"T1425","span":{"begin":126,"end":127},"obj":"-LRB-"},{"id":"T1424","span":{"begin":124,"end":125},"obj":"-COMMA-"},{"id":"T1423","span":{"begin":123,"end":124},"obj":"-RRB-"},{"id":"T1422","span":{"begin":121,"end":123},"obj":"CD"},{"id":"T1421","span":{"begin":120,"end":121},"obj":"-LRB-"},{"id":"T1420","span":{"begin":119,"end":120},"obj":"-LRB-"},{"id":"T1419","span":{"begin":105,"end":118},"obj":"NN"},{"id":"T1418","span":{"begin":101,"end":104},"obj":"PRP-DOLLAR-"},{"id":"T1417","span":{"begin":95,"end":100},"obj":"VB"},{"id":"T1416","span":{"begin":92,"end":94},"obj":"TO"},{"id":"T1415","span":{"begin":88,"end":91},"obj":"CC"},{"id":"T1414","span":{"begin":84,"end":87},"obj":"NN"},{"id":"T1413","span":{"begin":78,"end":83},"obj":"NN"},{"id":"T1412","span":{"begin":74,"end":77},"obj":"DT"},{"id":"T1411","span":{"begin":69,"end":73},"obj":"IN"},{"id":"T1410","span":{"begin":59,"end":68},"obj":"VB"},{"id":"T1409","span":{"begin":56,"end":58},"obj":"TO"},{"id":"T1408","span":{"begin":50,"end":55},"obj":"VB"},{"id":"T1407","span":{"begin":45,"end":49},"obj":"VB"},{"id":"T1406","span":{"begin":40,"end":44},"obj":"VB"},{"id":"T1405","span":{"begin":34,"end":39},"obj":"WDT"},{"id":"T1404","span":{"begin":32,"end":33},"obj":"-COMMA-"},{"id":"T1403","span":{"begin":24,"end":32},"obj":"NN"},{"id":"T1402","span":{"begin":19,"end":23},"obj":"NN"},{"id":"T1401","span":{"begin":15,"end":18},"obj":"CC"},{"id":"T1400","span":{"begin":9,"end":14},"obj":"NN"},{"id":"T1399","span":{"begin":5,"end":8},"obj":"DT"}],"relations":[{"id":"R966","pred":"arg1Of","subj":"T1400","obj":"T1401"},{"id":"R967","pred":"arg2Of","subj":"T1402","obj":"T1401"},{"id":"R969","pred":"arg1Of","subj":"T1403","obj":"T1399"},{"id":"R970","pred":"arg1Of","subj":"T1403","obj":"T1400"},{"id":"R971","pred":"arg1Of","subj":"T1403","obj":"T1402"},{"id":"R972","pred":"arg1Of","subj":"T1403","obj":"T1404"},{"id":"R973","pred":"arg1Of","subj":"T1403","obj":"T1405"},{"id":"R974","pred":"arg1Of","subj":"T1403","obj":"T1406"},{"id":"R975","pred":"arg1Of","subj":"T1403","obj":"T1407"},{"id":"R976","pred":"arg2Of","subj":"T1403","obj":"T1408"},{"id":"R977","pred":"arg1Of","subj":"T1403","obj":"T1410"},{"id":"R978","pred":"arg1Of","subj":"T1403","obj":"T1417"},{"id":"R979","pred":"arg2Of","subj":"T1408","obj":"T1406"},{"id":"R980","pred":"arg2Of","subj":"T1408","obj":"T1407"},{"id":"R981","pred":"arg1Of","subj":"T1410","obj":"T1409"},{"id":"R982","pred":"arg1Of","subj":"T1410","obj":"T1411"},{"id":"R983","pred":"arg1Of","subj":"T1410","obj":"T1415"},{"id":"R984","pred":"arg2Of","subj":"T1414","obj":"T1411"},{"id":"R985","pred":"arg1Of","subj":"T1414","obj":"T1412"},{"id":"R986","pred":"arg1Of","subj":"T1414","obj":"T1413"},{"id":"R987","pred":"arg3Of","subj":"T1415","obj":"T1408"},{"id":"R988","pred":"arg2Of","subj":"T1417","obj":"T1415"},{"id":"R989","pred":"arg1Of","subj":"T1417","obj":"T1416"},{"id":"R990","pred":"arg2Of","subj":"T1419","obj":"T1417"},{"id":"R991","pred":"arg1Of","subj":"T1419","obj":"T1418"},{"id":"R992","pred":"arg1Of","subj":"T1419","obj":"T1420"},{"id":"R993","pred":"arg2Of","subj":"T1422","obj":"T1420"},{"id":"R994","pred":"arg1Of","subj":"T1422","obj":"T1421"},{"id":"R995","pred":"arg3Of","subj":"T1423","obj":"T1420"},{"id":"R996","pred":"arg2Of","subj":"T1426","obj":"T1425"},{"id":"R997","pred":"arg3Of","subj":"T1427","obj":"T1425"},{"id":"R999","pred":"arg1Of","subj":"T1428","obj":"T1429"},{"id":"R1000","pred":"arg1Of","subj":"T1428","obj":"T1432"},{"id":"R1001","pred":"arg2Of","subj":"T1428","obj":"T1433"},{"id":"R1002","pred":"arg2Of","subj":"T1430","obj":"T1429"},{"id":"R1003","pred":"arg3Of","subj":"T1431","obj":"T1429"},{"id":"R1004","pred":"arg1Of","subj":"T1433","obj":"T1434"},{"id":"R1005","pred":"arg2Of","subj":"T1436","obj":"T1434"},{"id":"R1006","pred":"arg2Of","subj":"T1436","obj":"T1435"},{"id":"R1007","pred":"arg3Of","subj":"T1437","obj":"T1435"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"ding the NF-κB and AP-1 families, which have been shown to associate with the HIV-1 LTR and to drive its transcription ([22], [25]–[27], reviewed in [10]).\nNotably, HIV-1"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1782","span":{"begin":19,"end":23},"obj":"http://www.uniprot.org/uniprot/P05412"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"ding the NF-κB and AP-1 families, which have been shown to associate with the HIV-1 LTR and to drive its transcription ([22], [25]–[27], reviewed in [10]).\nNotably, HIV-1"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T1009","span":{"begin":105,"end":118},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"ding the NF-κB and AP-1 families, which have been shown to associate with the HIV-1 LTR and to drive its transcription ([22], [25]–[27], reviewed in [10]).\nNotably, HIV-1"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T2749","span":{"begin":19,"end":23},"obj":"Protein"},{"id":"T2747","span":{"begin":9,"end":14},"obj":"Protein"}],"text":"ding the NF-κB and AP-1 families, which have been shown to associate with the HIV-1 LTR and to drive its transcription ([22], [25]–[27], reviewed in [10]).\nNotably, HIV-1"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2245","span":{"begin":50,"end":55},"obj":"VBN"},{"id":"T2244","span":{"begin":45,"end":49},"obj":"VBN"},{"id":"T2243","span":{"begin":40,"end":44},"obj":"VBP"},{"id":"T2242","span":{"begin":34,"end":39},"obj":"WDT"},{"id":"T2241","span":{"begin":32,"end":33},"obj":","},{"id":"T2240","span":{"begin":24,"end":32},"obj":"NNS"},{"id":"T2239","span":{"begin":19,"end":23},"obj":"JJ"},{"id":"T2238","span":{"begin":15,"end":18},"obj":"CC"},{"id":"T2237","span":{"begin":9,"end":14},"obj":"NN"},{"id":"T2236","span":{"begin":5,"end":8},"obj":"DT"},{"id":"T2278","span":{"begin":165,"end":170},"obj":"JJ"},{"id":"T2277","span":{"begin":163,"end":164},"obj":","},{"id":"T2276","span":{"begin":156,"end":163},"obj":"RB"},{"id":"T2275","span":{"begin":154,"end":155},"obj":"."},{"id":"T2274","span":{"begin":153,"end":154},"obj":"-RRB-"},{"id":"T2273","span":{"begin":152,"end":153},"obj":"NNP"},{"id":"T2272","span":{"begin":150,"end":152},"obj":"CD"},{"id":"T2271","span":{"begin":149,"end":150},"obj":"NNP"},{"id":"T2270","span":{"begin":146,"end":148},"obj":"IN"},{"id":"T2269","span":{"begin":137,"end":145},"obj":"VBN"},{"id":"T2268","span":{"begin":135,"end":136},"obj":","},{"id":"T2267","span":{"begin":134,"end":135},"obj":"NNP"},{"id":"T2266","span":{"begin":132,"end":134},"obj":"CD"},{"id":"T2265","span":{"begin":131,"end":132},"obj":"NNP"},{"id":"T2264","span":{"begin":129,"end":130},"obj":"NNP"},{"id":"T2263","span":{"begin":127,"end":129},"obj":"CD"},{"id":"T2262","span":{"begin":126,"end":127},"obj":"NNP"},{"id":"T2261","span":{"begin":124,"end":125},"obj":","},{"id":"T2260","span":{"begin":123,"end":124},"obj":"NNP"},{"id":"T2259","span":{"begin":121,"end":123},"obj":"CD"},{"id":"T2258","span":{"begin":120,"end":121},"obj":"NNP"},{"id":"T2257","span":{"begin":119,"end":120},"obj":"-LRB-"},{"id":"T2256","span":{"begin":105,"end":118},"obj":"NN"},{"id":"T2255","span":{"begin":101,"end":104},"obj":"PRP$"},{"id":"T2254","span":{"begin":95,"end":100},"obj":"VB"},{"id":"T2253","span":{"begin":92,"end":94},"obj":"TO"},{"id":"T2252","span":{"begin":88,"end":91},"obj":"CC"},{"id":"T2251","span":{"begin":84,"end":87},"obj":"NNP"},{"id":"T2250","span":{"begin":78,"end":83},"obj":"NNP"},{"id":"T2249","span":{"begin":74,"end":77},"obj":"DT"},{"id":"T2248","span":{"begin":69,"end":73},"obj":"IN"},{"id":"T2247","span":{"begin":59,"end":68},"obj":"VB"},{"id":"T2246","span":{"begin":56,"end":58},"obj":"TO"}],"relations":[{"id":"R1783","pred":"det","subj":"T2236","obj":"T2237"},{"id":"R1790","pred":"cc","subj":"T2238","obj":"T2237"},{"id":"R1794","pred":"amod","subj":"T2239","obj":"T2240"},{"id":"R1799","pred":"conj","subj":"T2240","obj":"T2237"},{"id":"R1803","pred":"punct","subj":"T2241","obj":"T2237"},{"id":"R1807","pred":"nsubjpass","subj":"T2242","obj":"T2245"},{"id":"R1809","pred":"aux","subj":"T2243","obj":"T2245"},{"id":"R1810","pred":"auxpass","subj":"T2244","obj":"T2245"},{"id":"R1812","pred":"relcl","subj":"T2245","obj":"T2237"},{"id":"R1816","pred":"aux","subj":"T2246","obj":"T2247"},{"id":"R1822","pred":"xcomp","subj":"T2247","obj":"T2245"},{"id":"R1827","pred":"prep","subj":"T2248","obj":"T2247"},{"id":"R1829","pred":"det","subj":"T2249","obj":"T2251"},{"id":"R1832","pred":"compound","subj":"T2250","obj":"T2251"},{"id":"R1833","pred":"pobj","subj":"T2251","obj":"T2248"},{"id":"R1834","pred":"cc","subj":"T2252","obj":"T2247"},{"id":"R1838","pred":"aux","subj":"T2253","obj":"T2254"},{"id":"R1842","pred":"conj","subj":"T2254","obj":"T2247"},{"id":"R1846","pred":"poss","subj":"T2255","obj":"T2256"},{"id":"R1850","pred":"dobj","subj":"T2256","obj":"T2254"},{"id":"R1854","pred":"punct","subj":"T2257","obj":"T2256"},{"id":"R1858","pred":"nmod","subj":"T2258","obj":"T2260"},{"id":"R1859","pred":"nummod","subj":"T2259","obj":"T2260"},{"id":"R1861","pred":"nsubj","subj":"T2260","obj":"T2269"},{"id":"R1866","pred":"punct","subj":"T2261","obj":"T2260"},{"id":"R1872","pred":"nmod","subj":"T2262","obj":"T2264"},{"id":"R1876","pred":"nummod","subj":"T2263","obj":"T2264"},{"id":"R1880","pred":"conj","subj":"T2264","obj":"T2260"},{"id":"R1882","pred":"nmod","subj":"T2265","obj":"T2267"},{"id":"R1886","pred":"nummod","subj":"T2266","obj":"T2267"},{"id":"R1891","pred":"conj","subj":"T2267","obj":"T2260"},{"id":"R1895","pred":"punct","subj":"T2268","obj":"T2267"},{"id":"R1899","pred":"parataxis","subj":"T2269","obj":"T2256"},{"id":"R1900","pred":"prep","subj":"T2270","obj":"T2269"},{"id":"R1902","pred":"pobj","subj":"T2271","obj":"T2270"},{"id":"R1906","pred":"nummod","subj":"T2272","obj":"T2273"},{"id":"R1910","pred":"appos","subj":"T2273","obj":"T2271"},{"id":"R1914","pred":"punct","subj":"T2274","obj":"T2271"}],"text":"ding the NF-κB and AP-1 families, which have been shown to associate with the HIV-1 LTR and to drive its transcription ([22], [25]–[27], reviewed in [10]).\nNotably, HIV-1"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1900","span":{"begin":59,"end":68},"obj":"Binding"},{"id":"T1896","span":{"begin":78,"end":87},"obj":"Protein"},{"id":"T1895","span":{"begin":19,"end":32},"obj":"Protein"},{"id":"T1894","span":{"begin":9,"end":14},"obj":"Protein"}],"relations":[{"id":"R1399","pred":"themeOf","subj":"T1896","obj":"T1900"}],"text":"ding the NF-κB and AP-1 families, which have been shown to associate with the HIV-1 LTR and to drive its transcription ([22], [25]–[27], reviewed in [10]).\nNotably, HIV-1"}
testone
{"project":"testone","denotations":[{"id":"T876","span":{"begin":59,"end":68},"obj":"Binding"}],"text":"ding the NF-κB and AP-1 families, which have been shown to associate with the HIV-1 LTR and to drive its transcription ([22], [25]–[27], reviewed in [10]).\nNotably, HIV-1"}