PMC:3320587 / 38672-38809
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13900 | 118-137 | JJ | denotes | HIV-198IN22-N5-Mut. |
| T13899 | 112-117 | VB | denotes | named |
| T13898 | 109-111 | PRP | denotes | we |
| T13897 | 104-108 | IN | denotes | that |
| T13896 | 98-103 | NN | denotes | virus |
| T13895 | 91-97 | JJ | denotes | mutant |
| T13894 | 89-90 | DT | denotes | a |
| T13893 | 82-88 | VB | denotes | create |
| T13892 | 79-81 | TO | denotes | to |
| T13891 | 76-78 | NN | denotes | CC |
| T13890 | 73-75 | TO | denotes | to |
| T13889 | 68-72 | NN | denotes | site |
| T13888 | 63-67 | DT | denotes | each |
| T13887 | 60-62 | IN | denotes | of |
| T13886 | 57-59 | NN | denotes | TT |
| T13885 | 53-56 | DT | denotes | the |
| T13884 | 44-52 | VB | denotes | changing |
| T13883 | 41-43 | IN | denotes | by |
| T13882 | 35-40 | NN | denotes | sites |
| T13881 | 27-34 | NN | denotes | binding |
| T13880 | 21-26 | NN | denotes | NFAT5 |
| T13879 | 17-20 | CD | denotes | two |
| T13878 | 13-16 | DT | denotes | the |
| T13877 | 3-12 | VB | denotes | disrupted |
| T13876 | 0-2 | PRP | denotes | We |
| R10280 | T13876 | T13877 | arg1Of | We,disrupted |
| R10281 | T13877 | T13883 | arg1Of | disrupted,by |
| R10283 | T13882 | T13877 | arg2Of | sites,disrupted |
| R10284 | T13882 | T13878 | arg1Of | sites,the |
| R10285 | T13882 | T13879 | arg1Of | sites,two |
| R10286 | T13882 | T13880 | arg1Of | sites,NFAT5 |
| R10287 | T13882 | T13881 | arg1Of | sites,binding |
| R10288 | T13884 | T13883 | arg2Of | changing,by |
| R10289 | T13884 | T13892 | modOf | changing,to |
| R10290 | T13886 | T13884 | arg2Of | TT,changing |
| R10291 | T13886 | T13885 | arg1Of | TT,the |
| R10292 | T13886 | T13887 | arg1Of | TT,of |
| R10293 | T13886 | T13890 | arg1Of | TT,to |
| R10294 | T13889 | T13887 | arg2Of | site,of |
| R10295 | T13889 | T13888 | arg1Of | site,each |
| R10296 | T13891 | T13890 | arg2Of | CC,to |
| R10297 | T13893 | T13892 | arg1Of | create,to |
| R10298 | T13896 | T13893 | arg2Of | virus,create |
| R10299 | T13896 | T13894 | arg1Of | virus,a |
| R10300 | T13896 | T13895 | arg1Of | virus,mutant |
| R10302 | T13898 | T13899 | arg1Of | we,named |
| R10303 | T13899 | T13897 | arg1Of | named,that |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14057 | 21-26 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13726 | 27-34 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T223 | 0-137 | Sentence | denotes | We disrupted the two NFAT5 binding sites by changing the TT of each site to CC to create a mutant virus that we named HIV-198IN22-N5-Mut. |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14479 | 13-40 | Binding | denotes | the two NFAT5 binding sites |
| T14463 | 63-78 | Entity | denotes | each site to CC |
| T14461 | 13-40 | Entity | denotes | the two NFAT5 binding sites |
| T14460 | 21-26 | Protein | denotes | NFAT5 |
| T14452 | 76-78 | Entity | denotes | CC |
| R10807 | T14461 | T14479 | themeOf | the two NFAT5 binding sites,the two NFAT5 binding sites |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14273 | 79-81 | TO | denotes | to |
| T14272 | 76-78 | NNP | denotes | CC |
| T14271 | 73-75 | TO | denotes | to |
| T14270 | 68-72 | NN | denotes | site |
| T14269 | 63-67 | DT | denotes | each |
| T14268 | 60-62 | IN | denotes | of |
| T14267 | 57-59 | NNP | denotes | TT |
| T14266 | 53-56 | DT | denotes | the |
| T14265 | 44-52 | VBG | denotes | changing |
| T14264 | 41-43 | IN | denotes | by |
| T14263 | 35-40 | NNS | denotes | sites |
| T14262 | 27-34 | JJ | denotes | binding |
| T14261 | 21-26 | NNP | denotes | NFAT5 |
| T14260 | 17-20 | CD | denotes | two |
| T14259 | 13-16 | DT | denotes | the |
| T14258 | 3-12 | VBD | denotes | disrupted |
| T14257 | 0-2 | PRP | denotes | We |
| T14282 | 136-137 | . | denotes | . |
| T14281 | 118-136 | NNP | denotes | HIV-198IN22-N5-Mut |
| T14280 | 112-117 | VBD | denotes | named |
| T14279 | 109-111 | PRP | denotes | we |
| T14278 | 104-108 | IN | denotes | that |
| T14277 | 98-103 | NN | denotes | virus |
| T14276 | 91-97 | JJ | denotes | mutant |
| T14275 | 89-90 | DT | denotes | a |
| T14274 | 82-88 | VB | denotes | create |
| R10618 | T14257 | T14258 | nsubj | We,disrupted |
| R10619 | T14258 | T14258 | ROOT | disrupted,disrupted |
| R10620 | T14259 | T14263 | det | the,sites |
| R10621 | T14260 | T14263 | nummod | two,sites |
| R10622 | T14261 | T14263 | nmod | NFAT5,sites |
| R10623 | T14262 | T14263 | amod | binding,sites |
| R10624 | T14263 | T14258 | dobj | sites,disrupted |
| R10625 | T14264 | T14258 | prep | by,disrupted |
| R10626 | T14265 | T14264 | pcomp | changing,by |
| R10627 | T14266 | T14267 | det | the,TT |
| R10628 | T14267 | T14265 | dobj | TT,changing |
| R10629 | T14268 | T14267 | prep | of,TT |
| R10630 | T14269 | T14270 | det | each,site |
| R10631 | T14270 | T14268 | pobj | site,of |
| R10632 | T14271 | T14270 | prep | to,site |
| R10633 | T14272 | T14271 | pobj | CC,to |
| R10634 | T14273 | T14274 | aux | to,create |
| R10635 | T14274 | T14265 | advcl | create,changing |
| R10636 | T14275 | T14277 | det | a,virus |
| R10637 | T14276 | T14277 | amod | mutant,virus |
| R10638 | T14277 | T14274 | dobj | virus,create |
| R10639 | T14278 | T14280 | mark | that,named |
| R10640 | T14279 | T14280 | nsubj | we,named |
| R10641 | T14280 | T14277 | acl | named,virus |
| R10642 | T14281 | T14280 | oprd | HIV-198IN22-N5-Mut,named |
| R10643 | T14282 | T14258 | punct | .,disrupted |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14084 | 21-26 | Protein | denotes | NFAT5 |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13697 | 3-12 | Negative_regulation | denotes | disrupted |