> top > docs > PMC:3320587 > spans > 3814-4061 > annotations

PMC:3320587 / 3814-4061 JSONTXT

Annnotations TAB JSON ListView MergeView

2_test

Id Subject Object Predicate Lexical cue
22496647-10588727-98010775 44-46 10588727 denotes 21
22496647-9430229-98010776 49-51 9430229 denotes 23
22496647-21852682-98010777 67-69 21852682 denotes 10
22496647-14751757-98010778 73-75 14751757 denotes 24

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1397 241-242 -COMMA- denotes ,
T1396 233-241 NN denotes families
T1395 226-232 NN denotes factor
T1394 212-225 NN denotes transcription
T1393 203-211 JJ denotes specific
T1392 200-202 IN denotes of
T1391 189-199 NN denotes activation
T1390 182-188 VB denotes induce
T1389 171-181 RB denotes ultimately
T1388 169-170 -COMMA- denotes ,
T1387 165-169 NN denotes turn
T1386 162-164 IN denotes in
T1385 160-161 -COMMA- denotes ,
T1384 156-160 WDT denotes that
T1383 148-155 NN denotes kinases
T1382 146-147 -RRB- denotes )
T1381 143-146 NN denotes MAP
T1380 142-143 -LRB- denotes (
T1379 134-141 NN denotes protein
T1378 116-133 JJ denotes mitogen-activated
T1377 112-115 CC denotes and
T1376 110-111 -RRB- denotes )
T1375 107-110 NN denotes IKK
T1374 106-107 -LRB- denotes (
T1373 99-105 NN denotes kinase
T1372 95-98 NN denotes IκB
T1371 85-94 VB denotes activates
T1370 79-84 NN denotes TRAF6
T1369 76-77 -RRB- denotes )
T1368 75-76 -RRB- denotes ]
T1367 73-75 CD denotes 24
T1366 72-73 -LRB- denotes [
T1365 70-71 -COMMA- denotes ,
T1364 69-70 -RRB- denotes ]
T1363 67-69 CD denotes 10
T1362 66-67 -LRB- denotes [
T1361 63-65 IN denotes in
T1360 54-62 VB denotes reviewed
T1359 52-53 -COMMA- denotes ,
T1358 51-52 -RRB- denotes ]
T1357 49-51 CD denotes 23
T1356 48-49 -LRB- denotes [
T1355 47-48 NN denotes –
T1354 46-47 -RRB- denotes ]
T1353 44-46 CD denotes 21
T1352 43-44 -LRB- denotes [
T1351 42-43 -LRB- denotes (
T1350 36-41 NN denotes TRAF6
T1349 29-35 NN denotes ligase
T1348 19-28 NN denotes ubiquitin
T1347 15-18 DT denotes the
T1346 11-14 CC denotes and
T1345 9-10 -COMMA- denotes ,
T1344 4-9 NN denotes IRAK4
T1343 0-3 CC denotes and
R908 T1343 T1346 arg1Of and,and
R909 T1344 T1343 arg2Of IRAK4,and
R911 T1346 T1345 arg1Of and,","
R912 T1350 T1346 arg2Of TRAF6,and
R913 T1350 T1347 arg1Of TRAF6,the
R914 T1350 T1348 arg1Of TRAF6,ubiquitin
R915 T1350 T1349 arg1Of TRAF6,ligase
R916 T1350 T1351 arg1Of TRAF6,(
R917 T1353 T1352 arg2Of 21,[
R918 T1354 T1352 arg3Of ],[
R919 T1355 T1351 arg2Of –,(
R920 T1355 T1352 arg1Of –,[
R921 T1355 T1356 arg1Of –,[
R922 T1355 T1359 arg1Of –,","
R923 T1355 T1360 arg2Of –,reviewed
R924 T1355 T1365 arg1Of –,","
R925 T1355 T1366 arg1Of –,[
R926 T1357 T1356 arg2Of 23,[
R927 T1358 T1356 arg3Of ],[
R928 T1360 T1361 arg1Of reviewed,in
R929 T1363 T1361 arg2Of 10,in
R930 T1363 T1362 arg2Of 10,[
R931 T1364 T1362 arg3Of ],[
R932 T1367 T1366 arg2Of 24,[
R933 T1368 T1366 arg3Of ],[
R934 T1369 T1351 arg3Of ),(
R935 T1370 T1371 arg1Of TRAF6,activates
R939 T1373 T1372 arg1Of kinase,IκB
R940 T1373 T1374 arg1Of kinase,(
R941 T1373 T1377 arg1Of kinase,and
R942 T1375 T1374 arg2Of IKK,(
R943 T1376 T1374 arg3Of ),(
R944 T1377 T1371 arg2Of and,activates
R945 T1381 T1380 arg2Of MAP,(
R946 T1382 T1380 arg3Of ),(
R947 T1383 T1377 arg2Of kinases,and
R948 T1383 T1378 arg1Of kinases,mitogen-activated
R949 T1383 T1379 arg1Of kinases,protein
R950 T1383 T1380 arg1Of kinases,(
R951 T1383 T1384 arg1Of kinases,that
R952 T1383 T1390 arg1Of kinases,induce
R953 T1387 T1386 arg2Of turn,in
R954 T1390 T1385 arg1Of induce,","
R955 T1390 T1386 arg1Of induce,in
R956 T1390 T1388 arg1Of induce,","
R957 T1390 T1389 arg1Of induce,ultimately
R958 T1391 T1390 arg2Of activation,induce
R959 T1391 T1392 arg1Of activation,of
R960 T1396 T1392 arg2Of families,of
R961 T1396 T1393 arg1Of families,specific
R962 T1396 T1394 arg1Of families,transcription
R963 T1396 T1395 arg1Of families,factor
R964 T1396 T1397 arg1Of families,","

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T987 79-84 Protein denotes TRAF6
T986 36-41 Protein denotes TRAF6
T985 4-9 Protein denotes IRAK4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1781 95-105 http://www.uniprot.org/uniprot/Q60680-2 denotes IκB kinase
T1780 95-105 http://www.uniprot.org/uniprot/O15111 denotes IκB kinase
T1779 79-84 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T1778 36-41 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6

GO-BP

Id Subject Object Predicate Lexical cue
T1008 212-225 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T1023 189-225 http://purl.obolibrary.org/obo/GO_0045893 denotes activation of specific transcription
T1022 107-110 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK

GO-MF

Id Subject Object Predicate Lexical cue
T1039 107-110 http://purl.obolibrary.org/obo/GO_0008384 denotes IKK
T1038 19-28 http://purl.obolibrary.org/obo/GO_0031386 denotes ubiquitin

simple1

Id Subject Object Predicate Lexical cue
T1081 79-84 Protein denotes TRAF6
T1080 36-41 Protein denotes TRAF6
T1079 4-9 Protein denotes IRAK4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2675 79-84 Protein denotes TRAF6
T2674 36-41 Protein denotes TRAF6
T2673 4-9 Protein denotes IRAK4

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1853 36-41 Protein denotes TRAF6
T1854 79-84 Protein denotes TRAF6
T1852 4-9 Protein denotes IRAK4

DLUT931

Id Subject Object Predicate Lexical cue
T1803 79-84 Protein denotes TRAF6
T1802 36-41 Protein denotes TRAF6
T1801 4-9 Protein denotes IRAK4

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2787 116-147 Positive_regulation denotes mitogen-activated protein (MAP)
T2782 79-155 Positive_regulation denotes TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases
T2776 189-232 Positive_regulation denotes activation of specific transcription factor
T2764 15-41 Protein denotes the ubiquitin ligase TRAF6
T2753 116-147 Protein denotes mitogen-activated protein (MAP)
T2739 79-84 Protein denotes TRAF6
T2738 19-28 Protein denotes ubiquitin
T2729 200-232 Protein denotes of specific transcription factor
T2728 4-9 Protein denotes IRAK4
T2715 95-111 Protein denotes IκB kinase (IKK)
T2708 15-41 Protein denotes the ubiquitin ligase TRAF6
T2707 116-133 Entity denotes mitogen-activated
T2703 95-155 Protein denotes IκB kinase (IKK) and mitogen-activated protein (MAP) kinases
T2702 143-146 Protein denotes MAP
R2120 T2703 T2782 themeOf IκB kinase (IKK) and mitogen-activated protein (MAP) kinases,TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases
R2134 T2707 T2787 causeOf mitogen-activated,mitogen-activated protein (MAP)
R2147 T2729 T2776 themeOf of specific transcription factor,activation of specific transcription factor
R2149 T2739 T2782 causeOf TRAF6,TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases
R2151 T2753 T2787 themeOf mitogen-activated protein (MAP),mitogen-activated protein (MAP)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2234 241-242 , denotes ,
T2233 233-241 NNS denotes families
T2232 226-232 NN denotes factor
T2231 212-225 NN denotes transcription
T2230 203-211 JJ denotes specific
T2229 200-202 IN denotes of
T2228 189-199 NN denotes activation
T2227 182-188 VB denotes induce
T2226 171-181 RB denotes ultimately
T2225 169-170 , denotes ,
T2224 165-169 NN denotes turn
T2223 162-164 IN denotes in
T2222 160-161 , denotes ,
T2221 156-160 IN denotes that
T2220 148-155 VBZ denotes kinases
T2219 146-147 -RRB- denotes )
T2218 143-146 NNP denotes MAP
T2217 142-143 -LRB- denotes (
T2216 134-141 NN denotes protein
T2215 116-133 JJ denotes mitogen-activated
T2214 112-115 CC denotes and
T2213 110-111 -RRB- denotes )
T2212 107-110 NNP denotes IKK
T2211 106-107 -LRB- denotes (
T2210 99-105 NN denotes kinase
T2209 95-98 NNP denotes IκB
T2208 85-94 NNS denotes activates
T2207 79-84 CD denotes TRAF6
T2206 77-78 . denotes .
T2205 76-77 -RRB- denotes )
T2204 75-76 NNP denotes ]
T2203 73-75 CD denotes 24
T2202 72-73 NNP denotes [
T2201 70-71 , denotes ,
T2200 69-70 NNP denotes ]
T2199 67-69 CD denotes 10
T2198 66-67 NNP denotes [
T2197 63-65 IN denotes in
T2196 54-62 VBN denotes reviewed
T2195 52-53 , denotes ,
T2194 51-52 NNP denotes ]
T2193 49-51 CD denotes 23
T2192 48-49 NNP denotes [
T2191 46-47 NNP denotes ]
T2190 44-46 CD denotes 21
T2189 43-44 NNP denotes [
T2188 42-43 -LRB- denotes (
T2187 36-41 NNP denotes TRAF6
T2186 29-35 NN denotes ligase
T2185 19-28 NN denotes ubiquitin
T2184 15-18 DT denotes the
T2183 11-14 CC denotes and
T2182 9-10 , denotes ,
T2181 4-9 NNP denotes IRAK4
T2180 0-3 CC denotes and
R1613 T2189 T2187 appos [,TRAF6
R1621 T2190 T2191 nummod 21,]
R1626 T2191 T2187 appos ],TRAF6
R1629 T2192 T2187 appos [,TRAF6
R1633 T2193 T2194 nummod 23,]
R1637 T2194 T2187 appos ],TRAF6
R1641 T2195 T2196 punct ",",reviewed
R1644 T2196 T2196 ROOT reviewed,reviewed
R1649 T2197 T2196 prep in,reviewed
R1653 T2198 T2197 pobj [,in
R1657 T2199 T2200 nummod 10,]
R1661 T2200 T2196 npadvmod ],reviewed
R1663 T2201 T2200 punct ",",]
R1665 T2202 T2200 conj [,]
R1670 T2203 T2204 nummod 24,]
R1675 T2204 T2204 ROOT ],]
R1678 T2205 T2202 punct ),[
R1681 T2206 T2196 punct .,reviewed
R1685 T2207 T2208 nsubj TRAF6,activates
R1686 T2182 T2181 punct ",",IRAK4
R1687 T2183 T2181 cc and,IRAK4
R1688 T2184 T2196 det the,reviewed
R1689 T2208 T2208 ROOT activates,activates
R1690 T2185 T2196 npadvmod ubiquitin,reviewed
R1691 T2186 T2187 compound ligase,TRAF6
R1692 T2187 T2185 appos TRAF6,ubiquitin
R1693 T2188 T2189 punct (,[
R1694 T2209 T2210 compound IκB,kinase
R1695 T2210 T2208 dobj kinase,activates
R1696 T2211 T2212 punct (,IKK
R1697 T2212 T2210 appos IKK,kinase
R1698 T2213 T2212 punct ),IKK
R1699 T2214 T2210 cc and,kinase
R1702 T2215 T2216 amod mitogen-activated,protein
R1705 T2216 T2210 conj protein,kinase
R1709 T2217 T2218 punct (,MAP
R1713 T2218 T2216 appos MAP,protein
R1717 T2219 T2216 punct ),protein
R1723 T2220 T2208 conj kinases,activates
R1726 T2221 T2227 mark that,induce
R1730 T2222 T2227 punct ",",induce
R1734 T2223 T2227 prep in,induce
R1738 T2224 T2223 pobj turn,in
R1743 T2225 T2227 punct ",",induce
R1747 T2226 T2227 advmod ultimately,induce
R1749 T2227 T2220 ccomp induce,kinases
R1751 T2228 T2227 dobj activation,induce
R1754 T2229 T2228 prep of,activation
R1758 T2230 T2233 amod specific,families
R1762 T2231 T2232 compound transcription,factor
R1765 T2232 T2233 compound factor,families
R1771 T2233 T2229 pobj families,of
R1775 T2234 T2233 punct ",",families

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1899 85-94 Positive_regulation denotes activates
T1898 85-94 Positive_regulation denotes activates
T1897 85-94 Positive_regulation denotes activates
T1893 116-155 Protein denotes mitogen-activated protein (MAP) kinases
T1892 107-110 Protein denotes IKK
T1891 95-105 Protein denotes IκB kinase
T1890 79-84 Protein denotes TRAF6
T1886 19-35 Protein denotes ubiquitin ligase
T1885 4-9 Protein denotes IRAK4
R1396 T1891 T1897 themeOf IκB kinase,activates
R1397 T1892 T1898 themeOf IKK,activates
R1398 T1893 T1899 themeOf mitogen-activated protein (MAP) kinases,activates
R1400 T1897 T1890 Cause activates,TRAF6
R1401 T1898 T1890 Cause activates,TRAF6
R1402 T1899 T1890 Cause activates,TRAF6

testone

Id Subject Object Predicate Lexical cue
T862 79-84 Protein denotes TRAF6
T861 36-41 Protein denotes TRAF6
T860 4-9 Protein denotes IRAK4

test3

Id Subject Object Predicate Lexical cue
T910 79-84 Protein denotes TRAF6
T909 36-41 Protein denotes TRAF6
T908 4-9 Protein denotes IRAK4
T888 79-84 Protein denotes TRAF6
T887 36-41 Protein denotes TRAF6
T886 4-9 Protein denotes IRAK4