PMC:3320587 / 31873-37949 JSON TXT

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2_test

Id	Subject	Object	Predicate	Lexical cue
22496647-10925286-98010795	5486-5488	10925286	denotes	48
22496647-9763605-98010796	5491-5493	9763605	denotes	50
22496647-18036607-98010797	5582-5584	18036607	denotes	51

pmc-enju-pas

Id	Subject	Object	Predicate	Lexical cue
T12468	1008-1013	NN	denotes	virus
T26018	4368-4369	-RRB-	denotes	)
T26017	4349-4368	NN	denotes	HIV-1Lai/Bal-env–WT
T26016	4346-4348	TO	denotes	to
T26015	4337-4345	VB	denotes	compared
T26014	4334-4336	IN	denotes	as
T26013	4332-4333	-COMMA-	denotes	,
T26012	4328-4332	CD	denotes	0.01
T26011	4327-4328	SYM	denotes	<
T26010	4326-4327	NN	denotes	p
T26009	4324-4325	-COMMA-	denotes	,
T26008	4322-4324	SYM	denotes	**
T26007	4320-4321	-COLON-	denotes	;
T26006	4316-4320	CD	denotes	0.05
T26005	4315-4316	SYM	denotes	<
T26004	4314-4315	NN	denotes	p
T26003	4312-4313	-COMMA-	denotes	,
T26002	4311-4312	SYM	denotes	*
T26001	4310-4311	-LRB-	denotes	(
T26000	4298-4309	NN	denotes	histograms.
T25999	4295-4297	IN	denotes	as
T25998	4289-4294	VB	denotes	shown
T25997	4285-4288	VB	denotes	are
T25996	4281-4284	NN	denotes	MTb
T25995	4276-4280	IN	denotes	with
T25994	4264-4275	JJ	denotes	co-infected
T25993	4262-4263	-RRB-	denotes	)
T25992	4261-4262	NN	denotes	D
T25991	4260-4261	-LRB-	denotes	(
T25990	4257-4259	CC	denotes	or
T25989	4251-4256	RB	denotes	alone
T25988	4245-4250	NN	denotes	HIV-1
T25987	4243-4244	-RRB-	denotes	)
T25986	4242-4243	NN	denotes	C
T25985	4241-4242	-LRB-	denotes	(
T25984	4236-4240	IN	denotes	with
T25983	4227-4235	VB	denotes	infected
T25982	4218-4226	NN	denotes	cultures
T25981	4215-4217	IN	denotes	in
T25980	4212-4214	CD	denotes	12
T25979	4208-4211	NN	denotes	day
T25978	4205-4207	IN	denotes	at
T25977	4198-4204	NN	denotes	levels
T25976	4194-4197	NN	denotes	p24
T25975	4188-4193	JJ	denotes	viral
T25974	4185-4187	IN	denotes	of
T25973	4172-4184	NN	denotes	Presentation
T25972	4156-4170	JJ	denotes	post-infection
T25971	4153-4155	CD	denotes	12
T25970	4149-4152	CC	denotes	and
T25969	4147-4148	CD	denotes	7
T25968	4145-4146	-COMMA-	denotes	,
T25967	4144-4145	CD	denotes	4
T25966	4139-4143	NN	denotes	days
T25965	4136-4138	IN	denotes	at
T25964	4127-4135	VB	denotes	measured
T25963	4122-4126	VB	denotes	were
T25962	4109-4121	NN	denotes	supernatants
T25961	4101-4108	NN	denotes	culture
T25960	4097-4100	DT	denotes	the
T25959	4094-4096	IN	denotes	in
T25958	4087-4093	NN	denotes	levels
T25957	4083-4086	NN	denotes	p24
T25956	4077-4082	JJ	denotes	Viral
T25955	4074-4075	-RRB-	denotes	)
T25954	4063-4074	NN	denotes	MDM∶bacilli
T25953	4059-4062	CD	denotes	1∶1
T25952	4058-4059	-LRB-	denotes	(
T25951	4050-4057	NN	denotes	CDC1551
T25950	4046-4049	NN	denotes	MTb
T25949	4041-4045	IN	denotes	with
T25948	4029-4040	JJ	denotes	co-infected
T25929	3941-3942	-COMMA-	denotes	,
T25928	3933-3941	NN	denotes	I+II-Mut
T25927	3913-3932	NN	denotes	HIV-1Lai/Bal-env-κB
T25926	3911-3912	-COMMA-	denotes	,
T25925	3905-3911	NN	denotes	II-Mut
T25924	3885-3904	NN	denotes	HIV-1Lai/Bal-env-κB
T25923	3883-3884	-COMMA-	denotes	,
T25922	3878-3883	NN	denotes	I-Mut
T25921	3858-3877	NN	denotes	HIV-1Lai/Bal-env-κB
T25920	3850-3857	NN	denotes	mutants
T25919	3846-3849	DT	denotes	the
T25918	3843-3845	CC	denotes	or
T25917	3823-3842	NN	denotes	HIV-1Lai/Bal-env–WT
T25916	3820-3822	IN	denotes	of
T25915	3813-3819	NN	denotes	TCID50
T25914	3808-3812	CD	denotes	1000
T25913	3803-3807	IN	denotes	with
T25912	3794-3802	VB	denotes	infected
T25911	3789-3793	VB	denotes	were
T25910	3782-3788	NN	denotes	donors
T25909	3775-3781	JJ	denotes	normal
T25908	3770-3774	CD	denotes	four
T25907	3765-3769	IN	denotes	from
T25906	3761-3764	NN	denotes	MDM
T25905	3756-3759	NN	denotes	MDM
T25904	3753-3755	IN	denotes	in
T25903	3741-3752	NN	denotes	replication
T25902	3735-3740	NN	denotes	HIV-1
T25901	3723-3734	JJ	denotes	MTb-induced
T25900	3714-3722	VB	denotes	inhibits
T25899	3710-3713	NN	denotes	LTR
T25898	3706-3709	DT	denotes	the
T25897	3703-3705	IN	denotes	in
T25896	3697-3702	NN	denotes	sites
T25895	3691-3696	NN	denotes	NFAT5
T25894	3688-3690	CC	denotes	or
T25893	3682-3687	NN	denotes	NF-κB
T25892	3679-3681	IN	denotes	of
T25891	3668-3678	NN	denotes	Disruption
T25947	4027-4028	-RRB-	denotes	)
T25946	4026-4027	NN	denotes	B
T25945	4025-4026	-LRB-	denotes	(
T25944	4022-4024	CC	denotes	or
T25943	4016-4021	RB	denotes	alone
T25942	4010-4015	NN	denotes	virus
T25941	4005-4009	IN	denotes	with
T25940	3996-4004	VB	denotes	infected
T25939	3991-3995	VB	denotes	left
T25938	3989-3990	-RRB-	denotes	)
T25937	3988-3989	NN	denotes	A
T25936	3987-3988	-LRB-	denotes	(
T25935	3980-3986	CC	denotes	either
T25934	3975-3979	VB	denotes	were
T25933	3971-3974	CC	denotes	and
T25932	3969-3970	-COMMA-	denotes	,
T25931	3946-3969	NN	denotes	HIV-1Lai/Bal-env-N5-Mut
T25930	3943-3945	CC	denotes	or
T25483	2622-2641	NN	denotes	d to HIV-1Lai/Bal-E
T25482	2620-2622	TO	denotes	re
T25481	2612-2620	VB	denotes	as compa
T25480	2609-2611	IN	denotes	1,
T25479	2608-2609	-COMMA-	denotes	0
T25478	2604-2608	CD	denotes	p<0.
T25477	2602-2603	SYM	denotes	,
T25476	2601-2602	NN	denotes	*
T25475	2600-2601	-COMMA-	denotes	*
T25474	2598-2600	SYM	denotes	;
T25473	2597-2598	-COLON-	denotes	5
T25472	2593-2597	CD	denotes	<0.0
T25471	2592-2593	SYM	denotes	p
T25470	2590-2591	NN	denotes	,
T25469	2589-2590	-COMMA-	denotes	*
T25468	2587-2588	SYM	denotes	.
T25467	2586-2587	-RRB-	denotes	)
T25466	2574-2586	RB	denotes	respectively
T25465	2572-2573	-COMMA-	denotes	,
T25464	2560-2572	NN	denotes	co-infection
T25463	2556-2559	NN	denotes	MTb
T25462	2551-2555	IN	denotes	with
T25461	2547-2550	CC	denotes	and
T25441	2406-2410	NN	denotes	PBMC
T25440	2404-2405	-RRB-	denotes	)
T25439	2400-2404	NN	denotes	bars
T25438	2394-2399	JJ	denotes	black
T25437	2393-2394	-LRB-	denotes	(
T25436	2381-2392	JJ	denotes	co-infected
T25435	2377-2380	NN	denotes	MTb
T25434	2373-2376	CC	denotes	and
T25433	2371-2372	-RRB-	denotes	)
T25432	2367-2371	NN	denotes	bars
T25431	2362-2366	JJ	denotes	grey
T25430	2361-2362	-LRB-	denotes	(
T25429	2350-2360	JJ	denotes	uninfected
T25428	2346-2349	NN	denotes	MTb
T25427	2342-2345	DT	denotes	the
T25426	2339-2341	IN	denotes	in
T25425	2336-2338	CD	denotes	12
T25424	2332-2335	NN	denotes	day
T25423	2329-2331	IN	denotes	at
T25422	2322-2328	NN	denotes	levels
T25421	2318-2321	NN	denotes	p24
T25420	2312-2317	JJ	denotes	viral
T25419	2307-2311	VB	denotes	show
T25418	2296-2306	NN	denotes	Histograms
T25417	2294-2295	-RRB-	denotes	)
T25416	2293-2294	NN	denotes	C
T25415	2292-2293	-LRB-	denotes	(
T25414	2276-2291	JJ	denotes	post-infection.
T25413	2273-2275	CD	denotes	12
T25412	2269-2272	CC	denotes	and
T25411	2267-2268	CD	denotes	7
T25410	2265-2266	-COMMA-	denotes	,
T25409	2264-2265	CD	denotes	4
T25408	2259-2263	NN	denotes	days
T25407	2256-2258	IN	denotes	at
T25406	2247-2255	VB	denotes	measured
T25405	2242-2246	VB	denotes	were
T25404	2229-2241	NN	denotes	supernatants
T25403	2221-2228	NN	denotes	culture
T25402	2218-2220	IN	denotes	in
T25401	2211-2217	NN	denotes	levels
T25400	2207-2210	NN	denotes	p24
T25399	2201-2206	JJ	denotes	Viral
T25398	2198-2199	-RRB-	denotes	)
T25397	2185-2198	NN	denotes	cells∶bacilli
T25396	2180-2184	CD	denotes	10∶1
T25395	2179-2180	-LRB-	denotes	(
T25394	2171-2178	NN	denotes	CDC1551
T25393	2163-2170	NN	denotes	isolate
T25392	2159-2162	NN	denotes	MTb
T25391	2154-2158	IN	denotes	with
T25390	2142-2153	JJ	denotes	co-infected
T25389	2140-2141	-RRB-	denotes	)
T25388	2139-2140	NN	denotes	B
T25387	2138-2139	-LRB-	denotes	(
T25386	2135-2137	CC	denotes	or
T25385	2133-2134	-COMMA-	denotes	,
T25384	2124-2133	JJ	denotes	untreated
T25383	2119-2123	VB	denotes	left
T25382	2117-2118	-RRB-	denotes	)
T25381	2116-2117	NN	denotes	A
T25380	2115-2116	-LRB-	denotes	(
T25379	2113-2114	-COLON-	denotes	;
T25378	2107-2113	CC	denotes	either
T25377	2103-2106	CC	denotes	and
T25376	2079-2102	NN	denotes	HIV-1Lai/Bal-env-N5-Mut
T25375	2076-2078	CC	denotes	or
T25374	2074-2075	-COMMA-	denotes	,
T25373	2066-2074	NN	denotes	I+II-Mut
T25372	2046-2065	NN	denotes	HIV-1Lai/Bal-env-κB
T25371	2044-2045	-COMMA-	denotes	,
T25370	2038-2044	NN	denotes	II-Mut
T25369	2018-2037	NN	denotes	HIV-1Lai/Bal-env-κB
T25368	2016-2017	-COMMA-	denotes	,
T25367	2011-2016	NN	denotes	I-Mut
T25366	1991-2010	NN	denotes	HIV-1Lai/Bal-env-κB
T25365	1983-1990	NN	denotes	mutants
T25364	1979-1982	DT	denotes	the
T25363	1976-1978	CC	denotes	or
T25362	1956-1975	NN	denotes	HIV-1Lai/Bal-env-WT
T25361	1949-1955	NN	denotes	TCID50
T25360	1944-1948	CD	denotes	1000
T25359	1939-1943	IN	denotes	with
T25358	1930-1938	VB	denotes	infected
T25357	1925-1929	VB	denotes	were
T25356	1918-1924	NN	denotes	donors
T25355	1911-1917	JJ	denotes	normal
T25354	1906-1910	CD	denotes	four
T25353	1901-1905	IN	denotes	from
T25352	1896-1900	NN	denotes	PBMC
T25351	1891-1894	NN	denotes	MTb
T25350	1886-1890	IN	denotes	with
T25349	1873-1885	NN	denotes	co-infection
T25348	1867-1872	IN	denotes	after
T25347	1862-1866	NN	denotes	PBMC
T25346	1856-1861	JJ	denotes	human
T25345	1853-1855	IN	denotes	in
T25344	1841-1852	NN	denotes	replication
T25343	1835-1840	NN	denotes	virus
T25342	1825-1834	JJ	denotes	R5-tropic
T25341	1816-1824	VB	denotes	inhibits
T25340	1812-1815	NN	denotes	LTR
T25339	1810-1811	NN	denotes	B
T25338	1802-1809	NN	denotes	subtype
T25337	1796-1801	NN	denotes	HIV-1
T25336	1792-1795	DT	denotes	the
T25335	1789-1791	IN	denotes	in
T25334	1783-1788	NN	denotes	sites
T25333	1775-1782	NN	denotes	binding
T25332	1769-1774	NN	denotes	NFAT5
T25331	1766-1768	CC	denotes	or
T25330	1760-1765	NN	denotes	NF-κB
T25329	1756-1759	DT	denotes	the
T25328	1753-1755	IN	denotes	of
T25327	1742-1752	NN	denotes	disruption
T25326	1733-1741	JJ	denotes	Specific
T25325	1728-1731	NN	denotes	LTR
T25324	1724-1727	DT	denotes	the
T25323	1721-1723	TO	denotes	to
T25322	1715-1720	NN	denotes	NF-κB
T25321	1711-1714	CC	denotes	and
T25320	1705-1710	NN	denotes	NFAT5
T25319	1702-1704	IN	denotes	of
T25318	1694-1701	NN	denotes	binding
T25317	1691-1693	IN	denotes	on
T25316	1683-1690	VB	denotes	depends
T25315	1678-1682	NN	denotes	PBMC
T25314	1675-1677	IN	denotes	in
T25313	1663-1674	NN	denotes	replication
T25312	1657-1662	NN	denotes	HIV-1
T25311	1645-1656	JJ	denotes	MTb-induced
T25460	2539-2546	IN	denotes	without
T25459	2538-2539	-LRB-	denotes	(
T25458	2527-2537	NN	denotes	conditions
T25457	2514-2526	JJ	denotes	experimental
T25456	2509-2513	JJ	denotes	same
T25455	2505-2508	DT	denotes	the
T25454	2499-2504	IN	denotes	under
T25453	2487-2498	NN	denotes	replication
T25452	2481-2486	NN	denotes	virus
T25451	2471-2480	JJ	denotes	wild-type
T25450	2468-2470	TO	denotes	to
T25449	2459-2467	VB	denotes	compared
T25448	2455-2458	VB	denotes	was
T25447	2447-2454	NN	denotes	viruses
T25446	2440-2446	JJ	denotes	mutant
T25445	2436-2439	DT	denotes	the
T25444	2433-2435	IN	denotes	of
T25443	2421-2432	NN	denotes	Replication
T25442	2411-2419	NN	denotes	cultures
T12988	5904-5907	CC	denotes	and
T12987	5899-5903	NN	denotes	PBMC
T12986	5894-5898	IN	denotes	from
T12985	5886-5893	NN	denotes	results
T12984	5882-5885	DT	denotes	the
T12983	5880-5881	-COMMA-	denotes	,
T12982	5872-5880	RB	denotes	together
T12981	5866-5871	VB	denotes	Taken
T12980	5852-5864	NN	denotes	co-infection
T12979	5848-5851	NN	denotes	MTb
T12978	5845-5847	IN	denotes	of
T12977	5836-5844	NN	denotes	presence
T12976	5833-5835	CC	denotes	or
T12975	5825-5832	NN	denotes	absence
T12974	5821-5824	DT	denotes	the
T12973	5818-5820	IN	denotes	in
T12972	5814-5817	NN	denotes	MDM
T12971	5805-5813	VB	denotes	isolated
T12970	5802-5804	IN	denotes	in
T12969	5790-5801	NN	denotes	replication
T12968	5784-5789	NN	denotes	virus
T12967	5781-5783	IN	denotes	on
T12966	5771-5780	NN	denotes	mutations
T12965	5766-5770	NN	denotes	site
T12964	5758-5765	NN	denotes	binding
T12963	5752-5757	NN	denotes	NFAT5
T12962	5745-5751	CC	denotes	versus
T12961	5739-5744	NN	denotes	NF-κB
T12960	5736-5738	IN	denotes	of
T12950	5675-5678	NN	denotes	MDM
T12949	5673-5674	-COMMA-	denotes	,
T12948	5665-5673	NN	denotes	agonists
T12947	5661-5664	NN	denotes	TLR
T12946	5658-5660	IN	denotes	by
T12945	5650-5657	VB	denotes	induced
T12944	5645-5649	RB	denotes	also
T12943	5642-5644	VB	denotes	is
T12942	5631-5641	NN	denotes	expression
T12941	5626-5630	NN	denotes	gene
T12940	5620-5625	NN	denotes	NFAT5
T12939	5618-5619	-COMMA-	denotes	,
T12938	5617-5618	CD	denotes	2
T12937	5610-5616	NN	denotes	Figure
T12936	5607-5609	IN	denotes	in
T12935	5601-5606	VB	denotes	shown
T12934	5596-5600	VB	denotes	have
T12933	5593-5595	PRP	denotes	we
T12932	5590-5592	IN	denotes	as
T12931	5586-5589	CC	denotes	and
T12930	5584-5585	-RRB-	denotes	]
T12929	5582-5584	CD	denotes	51
T12928	5581-5582	-LRB-	denotes	[
T12927	5572-5580	NN	denotes	agonists
T12926	5568-5571	NN	denotes	TLR
T12925	5565-5567	TO	denotes	to
T12924	5556-5564	NN	denotes	response
T12923	5553-5555	IN	denotes	in
T12922	5549-5552	NN	denotes	MDM
T12921	5541-5548	JJ	denotes	primary
T12920	5538-5540	IN	denotes	in
T12919	5528-5537	VB	denotes	activated
T12918	5516-5527	RB	denotes	efficiently
T12917	5513-5515	VB	denotes	is
T12916	5507-5512	NN	denotes	NF-κB
T12915	5502-5506	IN	denotes	that
T12914	5496-5501	VB	denotes	Given
T12913	5493-5494	-RRB-	denotes	]
T12912	5491-5493	CD	denotes	50
T12911	5490-5491	-LRB-	denotes	[
T12910	5489-5490	CD	denotes	–
T12909	5488-5489	-RRB-	denotes	]
T12908	5486-5488	CD	denotes	48
T12907	5485-5486	-LRB-	denotes	[
T12906	5477-5484	NN	denotes	factors
T12905	5466-5476	JJ	denotes	inhibitory
T12904	5457-5465	JJ	denotes	cellular
T12903	5454-5456	IN	denotes	of
T12902	5443-5453	NN	denotes	expression
T12901	5434-5442	VB	denotes	enhanced
T12900	5430-5433	DT	denotes	the
T12899	5426-5429	CC	denotes	and
T12898	5416-5425	NN	denotes	synthesis
T12897	5406-5415	NN	denotes	chemokine
T12896	5403-5405	TO	denotes	to
T12895	5399-5402	IN	denotes	due
T12894	5389-5398	NN	denotes	infection
T12893	5383-5388	NN	denotes	HIV-1
T12892	5372-5382	VB	denotes	suppresses
T12891	5367-5371	FW	denotes	vivo
T12890	5364-5366	FW	denotes	ex
T12889	5355-5363	NN	denotes	cultures
T12888	5344-5354	NN	denotes	macrophage
T12887	5336-5343	JJ	denotes	primary
T12886	5330-5335	JJ	denotes	human
T12885	5327-5329	IN	denotes	of
T12884	5317-5326	NN	denotes	infection
T12883	5313-5316	NN	denotes	MTb
T12882	5308-5312	IN	denotes	that
T12881	5300-5307	VB	denotes	showing
T12880	5287-5299	NN	denotes	observations
T12879	5278-5286	JJ	denotes	previous
T12878	5273-5277	IN	denotes	with
T12877	5262-5272	JJ	denotes	consistent
T12876	5259-5261	VB	denotes	is
T12875	5254-5258	DT	denotes	This
T12874	5247-5252	RB	denotes	alone
T12873	5241-5246	NN	denotes	HIV-1
T12872	5236-5240	IN	denotes	with
T12871	5227-5235	VB	denotes	infected
T12870	5221-5226	DT	denotes	those
T12869	5216-5220	IN	denotes	with
T12868	5207-5215	VB	denotes	compared
T12867	5203-5206	NN	denotes	MTb
T12866	5198-5202	IN	denotes	with
T12865	5186-5197	VB	denotes	co-infected
T12864	5177-5185	NN	denotes	cultures
T12863	5173-5176	DT	denotes	the
T12862	5170-5172	IN	denotes	in
T12861	5164-5169	JJ	denotes	lower
T12860	5153-5163	RB	denotes	noticeably
T12859	5148-5152	VB	denotes	were
T12858	5141-5147	NN	denotes	levels
T12857	5137-5140	NN	denotes	p24
T12856	5129-5136	JJ	denotes	overall
T12855	5124-5128	IN	denotes	that
T12854	5119-5123	VB	denotes	note
T12853	5116-5118	PRP	denotes	We
T12852	5113-5114	-RRB-	denotes	)
T12851	5108-5113	NN	denotes	5B–5D
T12850	5100-5107	NN	denotes	Figures
T12849	5099-5100	-LRB-	denotes	(
T12848	5096-5098	CD	denotes	12
T12847	5092-5095	NN	denotes	day
T12846	5089-5091	IN	denotes	at
T12845	5077-5088	JJ	denotes	significant
T12844	5073-5076	RB	denotes	not
T12843	5069-5072	VB	denotes	was
T12842	5064-5068	DT	denotes	this
T12841	5062-5063	-COMMA-	denotes	,
T12840	5052-5062	VB	denotes	diminished
T12839	5048-5051	VB	denotes	was
T12838	5046-5047	-RRB-	denotes	)
T12837	5041-5046	NN	denotes	I-Mut
T12836	5021-5040	NN	denotes	HIV-1Lai/Bal-env-κB
T12835	5020-5021	-LRB-	denotes	(
T12834	5012-5019	NN	denotes	element
T12833	5000-5011	NN	denotes	NFAT5/NF-κB
T12832	4993-4999	JJ	denotes	shared
T12831	4989-4992	DT	denotes	the
T12830	4986-4988	IN	denotes	in
T12829	4977-4985	NN	denotes	mutation
T12828	4972-4976	NN	denotes	site
T12827	4964-4971	NN	denotes	binding
T12826	4958-4963	NN	denotes	NF-κB
T12825	4949-4957	JJ	denotes	proximal
T12824	4947-4948	-COMMA-	denotes	,
T12823	4941-4947	JJ	denotes	single
T12822	4937-4940	DT	denotes	the
T12821	4932-4936	IN	denotes	with
T12820	4926-4931	NN	denotes	virus
T12819	4919-4925	JJ	denotes	mutant
T12818	4915-4918	DT	denotes	the
T12817	4912-4914	IN	denotes	of
T12816	4900-4911	NN	denotes	replication
T12815	4891-4899	IN	denotes	although
T12814	4889-4890	-COMMA-	denotes	,
T12813	4882-4889	RB	denotes	Notably
T12812	4879-4880	-RRB-	denotes	)
T12811	4877-4879	NN	denotes	5D
T12810	4870-4876	NN	denotes	Figure
T12809	4869-4870	-LRB-	denotes	(
T12808	4863-4868	NN	denotes	virus
T12807	4853-4862	JJ	denotes	wild-type
T12806	4848-4852	IN	denotes	with
T12805	4842-4847	NN	denotes	cells
T12804	4839-4841	IN	denotes	of
T12803	4829-4838	NN	denotes	infection
T12802	4826-4828	TO	denotes	to
T12801	4817-4825	VB	denotes	compared
T12800	4814-4816	IN	denotes	as
T12799	4805-4813	NN	denotes	I+II-Mut
T12798	4785-4804	NN	denotes	HIV-1Lai/Bal-env-κB
T12797	4781-4784	CC	denotes	and
T12796	4774-4780	NN	denotes	II-Mut
T12795	4754-4773	NN	denotes	HIV-1Lai/Bal-env-κB
T12794	4749-4753	IN	denotes	with
T12793	4740-4748	VB	denotes	infected
T12792	4731-4739	NN	denotes	cultures
T12791	4728-4730	IN	denotes	in
T12790	4725-4727	CD	denotes	12
T12789	4721-4724	NN	denotes	day
T12788	4718-4720	IN	denotes	at
T12787	4712-4717	JJ	denotes	lower
T12786	4698-4711	RB	denotes	significantly
T12785	4693-4697	VB	denotes	were
T12784	4686-4692	NN	denotes	levels
T12783	4682-4685	NN	denotes	p24
T12782	4680-4681	-COMMA-	denotes	,
T12781	4672-4680	RB	denotes	Moreover
T12780	4669-4670	-RRB-	denotes	)
T12779	4667-4669	NN	denotes	5D
T12778	4660-4666	NN	denotes	Figure
T12777	4659-4660	-LRB-	denotes	(
T12776	4657-4658	-RRB-	denotes	)
T12775	4653-4657	CD	denotes	0.01
T12774	4652-4653	SYM	denotes	<
T12773	4651-4652	NN	denotes	p
T12772	4650-4651	-LRB-	denotes	(
T12771	4642-4649	NN	denotes	-N5-Mut
T12770	4625-4641	NN	denotes	HIV-1Lai/Bal-env
T12769	4620-4624	IN	denotes	with
T12768	4611-4619	VB	denotes	infected
T12767	4605-4610	NN	denotes	cells
T12766	4602-4604	IN	denotes	in
T12765	4592-4601	VB	denotes	inhibited
T12764	4578-4591	RB	denotes	significantly
T12763	4573-4577	VB	denotes	were
T12762	4566-4572	NN	denotes	levels
T12761	4562-4565	NN	denotes	p24
T12760	4560-4561	-COMMA-	denotes	,
T12759	4553-4560	RB	denotes	However
T12758	4550-4551	-RRB-	denotes	)
T12757	4548-4550	NN	denotes	5B
T12756	4541-4547	NN	denotes	Figure
T12755	4540-4541	-LRB-	denotes	(
T12754	4534-4539	NN	denotes	virus
T12753	4527-4533	JJ	denotes	mutant
T12752	4522-4526	NN	denotes	κB-I
T12751	4518-4521	DT	denotes	the
T12750	4513-4517	IN	denotes	with
T12749	4511-4512	-COMMA-	denotes	,
T12748	4505-4511	NN	denotes	levels
T12747	4499-4504	JJ	denotes	lower
T12746	4496-4498	TO	denotes	to
T12745	4494-4495	-COMMA-	denotes	,
T12744	4492-4494	CC	denotes	or
T12743	4482-4491	JJ	denotes	wild-type
T12742	4478-4481	DT	denotes	the
T12741	4471-4477	CC	denotes	either
T12740	4466-4470	IN	denotes	with
T12739	4457-4465	VB	denotes	infected
T12738	4452-4456	VB	denotes	were
T12737	4446-4451	NN	denotes	cells
T12736	4442-4445	DT	denotes	the
T12735	4437-4441	WRB	denotes	when
T12394	519-520	-COMMA-	denotes	,
T12393	518-519	CD	denotes	4
T12392	513-517	NN	denotes	days
T12391	510-512	IN	denotes	at
T12390	497-509	NN	denotes	supernatants
T12389	489-496	NN	denotes	culture
T12388	486-488	IN	denotes	in
T12387	479-485	NN	denotes	levels
T12386	475-478	NN	denotes	p24
T12385	465-474	VB	denotes	measuring
T12384	462-464	IN	denotes	by
T12383	453-461	VB	denotes	detected
T12382	448-452	VB	denotes	were
T12381	441-447	NN	denotes	levels
T12380	435-440	NN	denotes	virus
T12379	430-434	JJ	denotes	free
T12378	426-429	CC	denotes	and
T12377	412-425	JJ	denotes	mock-infected
T12376	409-411	CC	denotes	or
T12375	407-408	-RRB-	denotes	)
T12374	400-407	NN	denotes	CDC1551
T12373	399-400	-LRB-	denotes	(
T12372	395-398	NN	denotes	MTb
T12371	390-394	IN	denotes	with
T12370	378-389	VB	denotes	co-infected
T12369	373-377	VB	denotes	were
T12368	367-372	NN	denotes	cells
T12367	365-366	-COMMA-	denotes	,
T12366	356-365	NN	denotes	infection
T12365	346-355	JJ	denotes	overnight
T12364	340-345	IN	denotes	After
T12363	332-338	NN	denotes	clones
T12362	322-331	JJ	denotes	molecular
T12361	305-321	NN	denotes	HIV-1Lai/Bal-env
T12360	298-304	JJ	denotes	mutant
T12359	295-297	CC	denotes	or
T12358	285-294	JJ	denotes	wild-type
T12357	281-284	DT	denotes	the
T12356	276-280	IN	denotes	with
T12355	269-275	NN	denotes	donors
T12354	262-268	JJ	denotes	normal
T12353	257-261	CD	denotes	four
T12352	252-256	IN	denotes	from
T12351	247-251	NN	denotes	PBMC
T12350	242-246	JJ	denotes	bulk
T12349	232-241	VB	denotes	infecting
T12348	229-231	IN	denotes	by
T12347	217-228	NN	denotes	replication
T12346	211-216	NN	denotes	HIV-1
T12345	208-210	IN	denotes	of
T12344	197-207	NN	denotes	regulation
T12343	194-196	IN	denotes	on
T12342	186-193	NN	denotes	binding
T12341	180-185	NN	denotes	NFAT5
T12340	177-179	CC	denotes	or
T12339	171-176	NN	denotes	NF-κB
T12338	160-170	VB	denotes	disrupting
T12337	147-159	RB	denotes	specifically
T12336	144-146	IN	denotes	of
T12335	137-143	NN	denotes	impact
T12334	126-136	JJ	denotes	functional
T12333	122-125	DT	denotes	the
T12332	113-121	VB	denotes	examined
T12331	108-112	RB	denotes	next
T12330	105-107	PRP	denotes	We
T12329	93-104	NN	denotes	replication
T12328	87-92	NN	denotes	HIV-1
T12327	84-86	IN	denotes	of
T12326	74-83	NN	denotes	induction
T12325	61-73	JJ	denotes	MTb-mediated
T12324	58-60	IN	denotes	in
T12323	52-57	NN	denotes	roles
T12322	41-51	VB	denotes	activating
T12321	29-40	JJ	denotes	independent
T12320	24-28	VB	denotes	play
T12959	5729-5735	NN	denotes	effect
T12958	5725-5728	DT	denotes	the
T12957	5717-5724	VB	denotes	analyze
T12956	5714-5716	TO	denotes	to
T12955	5707-5713	NN	denotes	system
T12954	5694-5706	JJ	denotes	experimental
T12953	5685-5693	JJ	denotes	suitable
T12952	5683-5684	DT	denotes	a
T12951	5679-5682	VB	denotes	are
T12734	4427-4436	VB	denotes	increased
T12733	4420-4426	NN	denotes	levels
T12732	4416-4419	NN	denotes	p24
T12731	4414-4415	-COMMA-	denotes	,
T12730	4411-4414	NN	denotes	MTb
T12729	4406-4410	IN	denotes	with
T12728	4394-4405	VB	denotes	co-infected
T12727	4389-4393	VB	denotes	were
T12726	4380-4388	NN	denotes	cultures
T12725	4376-4379	DT	denotes	the
T12724	4371-4375	WRB	denotes	When
T12723	3621-3622	-RRB-	denotes	)
T12722	3616-3621	NN	denotes	5A–5C
T12721	3608-3615	NN	denotes	Figures
T12720	3607-3608	-LRB-	denotes	(
T12719	3601-3606	NN	denotes	virus
T12718	3591-3600	JJ	denotes	wild-type
T12717	3587-3590	DT	denotes	the
T12716	3584-3586	TO	denotes	to
T12715	3573-3583	NN	denotes	comparison
T12714	3570-3572	IN	denotes	in
T12713	3562-3569	VB	denotes	reduced
T12712	3548-3561	RB	denotes	significantly
T12711	3543-3547	VB	denotes	were
T12710	3541-3542	-RRB-	denotes	)
T12709	3537-3541	CD	denotes	0.01
T12708	3536-3537	SYM	denotes	<
T12707	3535-3536	NN	denotes	p
T12706	3534-3535	-LRB-	denotes	(
T12705	3510-3533	NN	denotes	HIV-1Lai/Bal-env-N5-Mut
T12704	3507-3509	IN	denotes	as
T12703	3502-3506	RB	denotes	well
T12702	3499-3501	RB	denotes	as
T12701	3497-3498	-RRB-	denotes	)
T12700	3493-3497	CD	denotes	0.01
T12699	3492-3493	SYM	denotes	<
T12698	3491-3492	NN	denotes	p
T12697	3490-3491	-LRB-	denotes	(
T12696	3481-3489	NN	denotes	I+II-Mut
T12695	3461-3480	NN	denotes	HIV-1Lai/Bal-env-κB
T12694	3457-3460	CC	denotes	and
T12693	3455-3456	-COMMA-	denotes	,
T12692	3454-3455	-RRB-	denotes	)
T12691	3450-3454	CD	denotes	0.01
T12690	3449-3450	SYM	denotes	<
T12689	3448-3449	NN	denotes	p
T12688	3447-3448	-LRB-	denotes	(
T12687	3440-3446	NN	denotes	II-Mut
T12686	3420-3439	NN	denotes	HIV-1Lai/Bal-env-κB
T12685	3418-3419	-COMMA-	denotes	,
T12684	3417-3418	-RRB-	denotes	)
T12683	3413-3417	CD	denotes	0.05
T12682	3412-3413	SYM	denotes	<
T12681	3411-3412	NN	denotes	p
T12680	3410-3411	-LRB-	denotes	(
T12679	3404-3409	NN	denotes	I-Mut
T12678	3384-3403	NN	denotes	HIV-1Lai/Bal-env-κB
T12677	3383-3384	-LRB-	denotes	(
T12676	3376-3382	NN	denotes	clones
T12675	3366-3375	JJ	denotes	molecular
T12674	3360-3365	JJ	denotes	viral
T12673	3353-3359	JJ	denotes	mutant
T12672	3350-3352	IN	denotes	of
T12671	3338-3349	NN	denotes	replication
T12670	3336-3337	-COMMA-	denotes	,
T12669	3324-3336	NN	denotes	co-infection
T12668	3320-3323	NN	denotes	MTb
T12667	3317-3319	IN	denotes	of
T12666	3309-3316	NN	denotes	absence
T12665	3305-3308	DT	denotes	the
T12664	3302-3304	IN	denotes	in
T12663	3300-3301	-COMMA-	denotes	,
T12662	3298-3300	NN	denotes	5C
T12661	3294-3297	CC	denotes	and
T12660	3291-3293	NN	denotes	5A
T12659	3283-3290	NN	denotes	Figures
T12658	3280-3282	IN	denotes	in
T12657	3274-3279	VB	denotes	shown
T12656	3271-3273	IN	denotes	As
T12655	3261-3269	VB	denotes	measured
T12654	3257-3260	VB	denotes	was
T12653	3245-3256	NN	denotes	replication
T12652	3239-3244	NN	denotes	virus
T12651	3235-3238	CC	denotes	and
T12650	3225-3234	NN	denotes	infection
T12649	3214-3224	JJ	denotes	post-HIV-1
T12648	3211-3213	CD	denotes	12
T12647	3207-3210	CC	denotes	and
T12646	3205-3206	-COMMA-	denotes	,
T12645	3204-3205	CD	denotes	7
T12644	3202-3203	-COMMA-	denotes	,
T12643	3201-3202	CD	denotes	4
T12642	3196-3200	NN	denotes	days
T12641	3193-3195	IN	denotes	at
T12640	3183-3192	VB	denotes	collected
T12639	3178-3182	VB	denotes	were
T12638	3165-3177	NN	denotes	Supernatants
T12637	3158-3163	RB	denotes	alone
T12636	3152-3157	NN	denotes	virus
T12584	2790-2792	PRP	denotes	we
T12583	2788-2789	-COMMA-	denotes	,
T12582	2779-2788	NN	denotes	pathogens
T12581	2774-2778	DT	denotes	both
T12580	2771-2773	IN	denotes	by
T12579	2762-2770	VB	denotes	infected
T12578	2750-2761	RB	denotes	efficiently
T12577	2746-2749	VB	denotes	are
T12576	2740-2745	WDT	denotes	which
T12575	2738-2739	-COMMA-	denotes	,
T12574	2735-2738	NN	denotes	MDM
T12573	2732-2734	IN	denotes	in
T12572	2726-2731	NN	denotes	usage
T12571	2721-2725	NN	denotes	site
T12570	2713-2720	NN	denotes	binding
T12569	2707-2712	NN	denotes	NFAT5
T12568	2703-2706	CC	denotes	and
T12567	2697-2702	NN	denotes	NF-κB
T12566	2694-2696	IN	denotes	of
T12565	2687-2693	NN	denotes	impact
T12564	2676-2686	JJ	denotes	functional
T12563	2672-2675	DT	denotes	the
T12562	2664-2671	VB	denotes	examine
T12561	2651-2663	RB	denotes	specifically
T12560	2648-2650	TO	denotes	To
T12559	1588-1599	NN	denotes	replication
T12558	1582-1587	NN	denotes	HIV-1
T12557	1570-1581	JJ	denotes	MTb-induced
T12556	1567-1569	IN	denotes	in
T12555	1561-1566	NN	denotes	NFAT5
T12554	1557-1560	CC	denotes	and
T12553	1551-1556	NN	denotes	NF-κB
T12552	1546-1550	CC	denotes	both
T12551	1542-1545	IN	denotes	for
T12550	1536-1541	NN	denotes	roles
T12549	1526-1535	JJ	denotes	important
T12548	1521-1525	IN	denotes	with
T12547	1510-1520	JJ	denotes	consistent
T12546	1508-1509	-COMMA-	denotes	,
T12545	1496-1508	NN	denotes	co-infection
T12544	1492-1495	NN	denotes	MTb
T12543	1489-1491	IN	denotes	of
T12542	1481-1488	NN	denotes	context
T12541	1477-1480	DT	denotes	the
T12540	1474-1476	IN	denotes	in
T12539	1467-1473	NN	denotes	extent
T12538	1455-1466	JJ	denotes	significant
T12537	1450-1454	RB	denotes	more
T12536	1448-1449	DT	denotes	a
T12535	1445-1447	TO	denotes	to
T12534	1436-1444	VB	denotes	impaired
T12533	1432-1435	VB	denotes	was
T12532	1426-1431	NN	denotes	virus
T12531	1419-1425	JJ	denotes	mutant
T12530	1414-1418	DT	denotes	each
T12529	1411-1413	IN	denotes	of
T12528	1399-1410	NN	denotes	replication
T12527	1395-1398	DT	denotes	the
T12526	1393-1394	-COMMA-	denotes	,
T12525	1386-1393	RB	denotes	However
T12524	1372-1384	NN	denotes	co-infection
T12523	1368-1371	NN	denotes	MTb
T12522	1365-1367	IN	denotes	by
T12521	1355-1364	NN	denotes	induction
T12520	1349-1354	JJ	denotes	viral
T12519	1339-1348	VB	denotes	abolished
T12518	1328-1338	RB	denotes	completely
T12517	1318-1327	NN	denotes	mutations
T12516	1314-1317	DT	denotes	the
T12515	1311-1313	IN	denotes	of
T12514	1306-1310	NN	denotes	None
T12513	1303-1304	-RRB-	denotes	)
T12512	1301-1303	NN	denotes	4C
T12511	1294-1300	NN	denotes	Figure
T12510	1293-1294	-LRB-	denotes	(
T12509	1287-1292	NN	denotes	virus
T12508	1277-1286	JJ	denotes	wild-type
T12507	1274-1276	TO	denotes	to
T12506	1263-1273	NN	denotes	comparison
T12505	1260-1262	IN	denotes	in
T12504	1258-1259	-COMMA-	denotes	,
T12503	1253-1258	NN	denotes	I-Mut
T12502	1233-1252	NN	denotes	HIV-1Lai/Bal-env-κB
T12501	1229-1232	RB	denotes	not
T12500	1225-1228	CC	denotes	but
T12499	1223-1224	-COMMA-	denotes	,
T12498	1200-1223	NN	denotes	HIV-1Lai/Bal-env-N5-Mut
T12497	1196-1199	CC	denotes	and
T12496	1187-1195	NN	denotes	I+II-Mut
T12495	1167-1186	NN	denotes	HIV-1Lai/Bal-env-κB
T12494	1165-1166	-COMMA-	denotes	,
T12493	1159-1165	NN	denotes	II-Mut
T12492	1139-1158	NN	denotes	HIV-1Lai/Bal-env–κB
T12491	1134-1138	IN	denotes	with
T12490	1125-1133	VB	denotes	infected
T12489	1116-1124	NN	denotes	cultures
T12488	1111-1115	NN	denotes	PBMC
T12487	1107-1110	DT	denotes	the
T12486	1104-1106	IN	denotes	in
T12485	1098-1103	JJ	denotes	lower
T12484	1084-1097	RB	denotes	significantly
T12483	1079-1083	RB	denotes	also
T12482	1074-1078	VB	denotes	were
T12481	1067-1073	NN	denotes	levels
T12480	1063-1066	NN	denotes	p24
T12479	1061-1062	-COMMA-	denotes	,
T12478	1049-1061	NN	denotes	co-infection
T12477	1045-1048	NN	denotes	MTb
T12476	1042-1044	IN	denotes	of
T12475	1034-1041	NN	denotes	absence
T12474	1030-1033	DT	denotes	the
T12473	1027-1029	IN	denotes	In
T12472	1024-1025	-RRB-	denotes	)
T12471	1022-1024	NN	denotes	4C
T12470	1015-1021	NN	denotes	Figure
T12469	1014-1015	-LRB-	denotes	(
T12467	998-1007	JJ	denotes	wild-type
T12466	995-997	TO	denotes	to
T12465	984-994	NN	denotes	comparison
T12464	981-983	IN	denotes	in
T12463	973-980	NN	denotes	-N5-Mut
T12462	956-972	NN	denotes	HIV-1Lai/Bal-env
T12461	952-955	CC	denotes	and
T12460	950-951	-COMMA-	denotes	,
T12459	942-950	NN	denotes	I+II-Mut
T12458	922-941	NN	denotes	HIV-1Lai/Bal-env-κB
T12457	920-921	-COMMA-	denotes	,
T12456	914-920	NN	denotes	II-Mut
T12455	894-913	NN	denotes	HIV-1Lai/Bal-env-κB
T12454	892-893	-COMMA-	denotes	,
T12453	887-892	NN	denotes	I-Mut
T12452	867-886	NN	denotes	HIV-1Lai/Bal-env-κB
T12451	864-866	IN	denotes	of
T12450	857-863	NN	denotes	levels
T12449	854-856	IN	denotes	in
T12448	844-853	NN	denotes	reduction
T12447	832-843	JJ	denotes	significant
T12446	830-831	DT	denotes	a
T12445	826-829	VB	denotes	was
T12444	820-825	EX	denotes	there
T12443	814-819	NN	denotes	cells
T12442	798-813	JJ	denotes	MTb-co-infected
T12441	795-797	IN	denotes	in
T12440	785-794	NN	denotes	infection
T12439	774-784	NN	denotes	post-HIV-1
T12438	771-773	CD	denotes	12
T12437	767-770	NN	denotes	day
T12436	764-766	IN	denotes	at
T12435	762-763	-COMMA-	denotes	,
T12434	760-762	NN	denotes	4C
T12433	753-759	NNP	denotes	Figure
T12432	750-752	IN	denotes	in
T12431	740-749	VB	denotes	displayed
T12430	729-739	NN	denotes	histograms
T12429	725-728	DT	denotes	the
T12428	722-724	IN	denotes	in
T12427	713-721	VB	denotes	depicted
T12426	710-712	IN	denotes	As
T12425	707-708	-RRB-	denotes	)
T12424	702-707	NN	denotes	4A–4B
T12423	694-701	NN	denotes	Figures
T12422	693-694	-LRB-	denotes	(
T12421	684-692	VB	denotes	examined
T12420	673-683	NN	denotes	timepoints
T12419	669-672	DT	denotes	all
T12418	666-668	IN	denotes	at
T12417	660-665	NN	denotes	cells
T12416	644-659	JJ	denotes	MTb-co-infected
T12415	640-643	CC	denotes	and
T12414	634-639	JJ	denotes	mock-
T12413	631-633	IN	denotes	in
T12412	625-630	NN	denotes	virus
T12411	615-624	JJ	denotes	wild-type
T12410	612-614	TO	denotes	to
T12409	601-611	NN	denotes	comparison
T12408	598-600	IN	denotes	in
T12407	590-597	VB	denotes	reduced
T12406	586-589	VB	denotes	was
T12405	580-585	NN	denotes	virus
T12404	573-579	JJ	denotes	mutant
T12403	568-572	DT	denotes	each
T12402	565-567	IN	denotes	of
T12401	553-564	NN	denotes	Replication
T12400	542-551	NN	denotes	infection
T12399	531-541	NN	denotes	post-HIV-1
T12398	528-530	CD	denotes	12
T12397	524-527	CC	denotes	and
T12396	522-523	-COMMA-	denotes	,
T12395	521-522	CD	denotes	7
T12635	3147-3151	IN	denotes	with
T12634	3138-3146	VB	denotes	infected
T12633	3133-3137	VB	denotes	left
T12632	3130-3132	CC	denotes	or
T12631	3128-3129	-RRB-	denotes	)
T12630	3121-3128	NN	denotes	CDC1551
T12629	3120-3121	-LRB-	denotes	(
T12628	3116-3119	NN	denotes	MTb
T12627	3111-3115	IN	denotes	with
T12626	3099-3110	VB	denotes	co-infected
T12625	3094-3098	VB	denotes	were
T12624	3085-3093	NN	denotes	cultures
T12623	3080-3084	NN	denotes	cell
T12622	3078-3079	-COMMA-	denotes	,
T12621	3068-3078	NN	denotes	incubation
T12620	3058-3067	JJ	denotes	overnight
T12619	3052-3057	IN	denotes	After
T12618	3027-3051	NN	denotes	HIV-1Lai/Bal-env-N5-Mut.
T12617	3024-3026	CC	denotes	or
T12616	3022-3023	-COMMA-	denotes	,
T12615	3014-3022	NN	denotes	I+II-Mut
T12614	2994-3013	NN	denotes	HIV-1Lai/Bal-env-κB
T12613	2992-2993	-COMMA-	denotes	,
T12612	2986-2992	NN	denotes	II-Mut
T12611	2966-2985	NN	denotes	HIV-1Lai/Bal-env-κB
T12610	2964-2965	-COMMA-	denotes	,
T12609	2959-2964	NN	denotes	I-Mut
T12608	2939-2958	NN	denotes	HIV-1Lai/Bal-env-κB
T12607	2932-2938	NN	denotes	clones
T12606	2926-2931	JJ	denotes	viral
T12605	2919-2925	JJ	denotes	mutant
T12604	2915-2918	DT	denotes	the
T12603	2910-2914	IN	denotes	with
T12602	2907-2909	CC	denotes	or
T12601	2890-2906	NN	denotes	HIV-1Lai/Bal-env
T12600	2880-2889	JJ	denotes	wild-type
T12599	2877-2879	IN	denotes	of
T12598	2870-2876	NN	denotes	TCID50
T12597	2865-2869	CD	denotes	1000
T12596	2860-2864	IN	denotes	with
T12595	2854-2859	NN	denotes	cells
T12594	2848-2853	DT	denotes	these
T12593	2839-2847	VB	denotes	infected
T12592	2835-2838	CC	denotes	and
T12591	2828-2834	NN	denotes	donors
T12590	2821-2827	JJ	denotes	normal
T12589	2816-2820	CD	denotes	four
T12588	2811-2815	IN	denotes	from
T12587	2807-2810	NN	denotes	MDM
T12586	2798-2806	VB	denotes	isolated
T12585	2793-2797	RB	denotes	next
T12319	16-23	NN	denotes	binding
T12318	10-15	NN	denotes	NFAT5
T12317	6-9	CC	denotes	and
T12316	0-5	NN	denotes	NF-κB
T13014	6070-6075	NN	denotes	sites
T13013	6064-6069	NN	denotes	NF-κB
T13012	6060-6063	DT	denotes	the
T13011	6057-6059	VB	denotes	do
T13010	6054-6056	IN	denotes	as
T13009	6050-6053	NN	denotes	MTb
T13008	6047-6049	IN	denotes	by
T13007	6036-6046	NN	denotes	regulation
T13006	6032-6035	NN	denotes	LTR
T13005	6029-6031	IN	denotes	in
T13004	6024-6028	NN	denotes	role
T13003	6008-6023	JJ	denotes	transcriptional
T13002	6006-6007	DT	denotes	a
T13001	5996-6005	JJ	denotes	important
T13000	5993-5995	IN	denotes	as
T12999	5987-5992	VB	denotes	plays
T12998	5982-5986	NN	denotes	site
T12997	5974-5981	NN	denotes	binding
T12996	5968-5973	NN	denotes	NFAT5
T12995	5958-5967	VB	denotes	conserved
T12994	5954-5957	DT	denotes	the
T12993	5949-5953	IN	denotes	that
T12992	5937-5948	VB	denotes	demonstrate
T12991	5925-5936	NN	denotes	experiments
T12990	5912-5924	NN	denotes	co-infection
T12989	5908-5911	NN	denotes	MDM
R9367	T12317	T12320	arg1Of	and,play
R9369	T12319	T12318	arg1Of	binding,NFAT5
R9370	T12320	T12324	arg1Of	play,in
R9371	T12323	T12320	arg2Of	roles,play
R9372	T12323	T12321	arg1Of	roles,independent
R9373	T12323	T12322	arg1Of	roles,activating
R9375	T12326	T12324	arg2Of	induction,in
R9376	T12326	T12325	arg1Of	induction,MTb-mediated
R9378	T12329	T12328	arg1Of	replication,HIV-1
R9379	T12330	T12332	arg1Of	We,examined
R9380	T12332	T12331	arg1Of	examined,next
R9381	T12335	T12332	arg2Of	impact,examined
R9382	T12335	T12333	arg1Of	impact,the
R9383	T12335	T12334	arg1Of	impact,functional
R9384	T12335	T12336	arg1Of	impact,of
R9385	T12338	T12336	arg2Of	disrupting,of
R9386	T12338	T12337	arg1Of	disrupting,specifically
R9387	T12338	T12348	arg1Of	disrupting,by
R9388	T12339	T12340	arg1Of	NF-κB,or
R9389	T12340	T12338	arg2Of	or,disrupting
R9390	T12340	T12343	arg1Of	or,on
R9391	T12342	T12340	arg2Of	binding,or
R9392	T12342	T12341	arg1Of	binding,NFAT5
R9393	T12344	T12343	arg2Of	regulation,on
R9394	T12344	T12345	arg1Of	regulation,of
R9395	T12347	T12345	arg2Of	replication,of
R9396	T12347	T12346	arg1Of	replication,HIV-1
R9397	T12349	T12348	arg2Of	infecting,by
R9398	T12349	T12352	arg1Of	infecting,from
R9399	T12351	T12349	arg2Of	PBMC,infecting
R9400	T12351	T12350	arg1Of	PBMC,bulk
R9401	T12355	T12352	arg2Of	donors,from
R9402	T12355	T12353	arg1Of	donors,four
R9403	T12355	T12354	arg1Of	donors,normal
R9404	T12355	T12356	arg1Of	donors,with
R9405	T12358	T12359	arg1Of	wild-type,or
R9406	T12360	T12359	arg2Of	mutant,or
R9407	T12363	T12356	arg2Of	clones,with
R9408	T12363	T12357	arg1Of	clones,the
R9409	T12363	T12358	arg1Of	clones,wild-type
R9410	T12363	T12360	arg1Of	clones,mutant
R9411	T12363	T12361	arg1Of	clones,HIV-1Lai/Bal-env
R9412	T12363	T12362	arg1Of	clones,molecular
R9413	T12366	T12364	arg1Of	infection,After
R9414	T12366	T12365	arg1Of	infection,overnight
R9415	T12366	T12371	arg2Of	infection,with
R9416	T12366	T12382	modOf	infection,were
R9417	T12368	T12369	arg1Of	cells,were
R9418	T12368	T12370	arg2Of	cells,co-infected
R9419	T12370	T12367	arg1Of	co-infected,","
R9420	T12370	T12369	arg2Of	co-infected,were
R9421	T12370	T12371	arg1Of	co-infected,with
R9422	T12372	T12373	arg1Of	MTb,(
R9423	T12372	T12376	arg1Of	MTb,or
R9424	T12374	T12373	arg2Of	CDC1551,(
R9425	T12375	T12373	arg3Of	),(
R9426	T12376	T12382	arg1Of	or,were
R9427	T12376	T12383	arg2Of	or,detected
R9428	T12377	T12378	arg1Of	mock-infected,and
R9429	T12379	T12378	arg2Of	free,and
R9430	T12381	T12376	arg2Of	levels,or
R9431	T12381	T12377	arg1Of	levels,mock-infected
R9432	T12381	T12379	arg1Of	levels,free
R9433	T12381	T12380	arg1Of	levels,virus
R9434	T12383	T12382	arg2Of	detected,were
R9435	T12383	T12384	arg1Of	detected,by
R9436	T12385	T12384	arg2Of	measuring,by
R9437	T12385	T12391	arg1Of	measuring,at
R9438	T12387	T12385	arg2Of	levels,measuring
R9439	T12387	T12386	arg1Of	levels,p24
R9440	T12387	T12388	arg1Of	levels,in
R9441	T12390	T12388	arg2Of	supernatants,in
R9442	T12390	T12389	arg1Of	supernatants,culture
R9443	T12393	T12394	arg1Of	4,","
R9444	T12394	T12397	arg1Of	",",and
R9445	T12395	T12394	arg2Of	7,","
R9446	T12397	T12391	arg2Of	and,at
R9447	T12397	T12392	arg1Of	and,days
R9448	T12397	T12396	arg1Of	and,","
R9449	T12400	T12397	arg2Of	infection,and
R9450	T12400	T12398	arg1Of	infection,12
R9451	T12400	T12399	arg1Of	infection,post-HIV-1
R9452	T12401	T12402	arg1Of	Replication,of
R9453	T12401	T12406	arg1Of	Replication,was
R9454	T12401	T12407	arg2Of	Replication,reduced
R9455	T12405	T12402	arg2Of	virus,of
R9456	T12405	T12403	arg1Of	virus,each
R9457	T12405	T12404	arg1Of	virus,mutant
R9458	T12407	T12406	arg2Of	reduced,was
R9459	T12407	T12408	arg1Of	reduced,in
R9462	T12409	T12408	arg2Of	comparison,in
R9480	T12430	T12429	arg1Of	histograms,the
R9481	T12430	T12431	arg1Of	histograms,displayed
R9482	T12431	T12432	arg1Of	displayed,in
R9483	T12431	T12435	arg1Of	displayed,","
R9484	T12433	T12432	arg2Of	Figure,in
R9485	T12434	T12431	arg2Of	4C,displayed
R9487	T12440	T12436	arg2Of	infection,at
R9488	T12440	T12437	arg1Of	infection,day
R9489	T12440	T12438	arg1Of	infection,12
R9490	T12440	T12439	arg1Of	infection,post-HIV-1
R9491	T12440	T12441	arg1Of	infection,in
R9492	T12443	T12441	arg2Of	cells,in
R9493	T12443	T12442	arg1Of	cells,MTb-co-infected
R9494	T12444	T12445	arg1Of	there,was
R9495	T12445	T12435	arg2Of	was,","
R9496	T12445	T12436	arg1Of	was,at
R9497	T12445	T12464	arg1Of	was,in
R9498	T12448	T12445	arg2Of	reduction,was
R9499	T12448	T12446	arg1Of	reduction,a
R9500	T12448	T12447	arg1Of	reduction,significant
R9501	T12448	T12449	arg1Of	reduction,in
R9502	T12450	T12449	arg2Of	levels,in
R9503	T12450	T12451	arg1Of	levels,of
R9504	T12453	T12452	arg1Of	I-Mut,HIV-1Lai/Bal-env-κB
R9505	T12453	T12454	arg1Of	I-Mut,","
R9506	T12454	T12457	arg1Of	",",","
R9507	T12456	T12454	arg2Of	II-Mut,","
R9508	T12456	T12455	arg1Of	II-Mut,HIV-1Lai/Bal-env-κB
R9509	T12457	T12461	arg1Of	",",and
R9510	T12459	T12457	arg2Of	I+II-Mut,","
R9511	T12459	T12458	arg1Of	I+II-Mut,HIV-1Lai/Bal-env-κB
R9512	T12461	T12451	arg2Of	and,of
R9513	T12461	T12460	arg1Of	and,","
R9514	T12463	T12461	arg2Of	-N5-Mut,and
R9515	T12463	T12462	arg1Of	-N5-Mut,HIV-1Lai/Bal-env
R9516	T12464	T12466	arg1Of	in,to
R9517	T12465	T12464	arg2Of	comparison,in
R9518	T12468	T12464	arg3Of	virus,in
R9519	T12468	T12467	arg1Of	virus,wild-type
R9520	T12468	T12469	arg1Of	virus,(
R9521	T12471	T12469	arg2Of	4C,(
R9522	T12471	T12470	arg1Of	4C,Figure
R9523	T12472	T12469	arg3Of	),(
R9524	T12473	T12474	arg1Of	In,the
R9525	T12473	T12476	arg1Of	In,of
R9526	T12475	T12473	arg2Of	absence,In
R9527	T12478	T12473	arg3Of	co-infection,In
R9528	T12478	T12477	arg1Of	co-infection,MTb
R9529	T12481	T12480	arg1Of	levels,p24
R9530	T12481	T12482	arg1Of	levels,were
R9531	T12481	T12485	arg1Of	levels,lower
R9532	T12482	T12473	arg1Of	were,In
R9533	T12482	T12479	arg1Of	were,","
R9534	T12482	T12483	arg1Of	were,also
R9535	T12485	T12482	arg2Of	lower,were
R9536	T12485	T12484	arg1Of	lower,significantly
R9537	T12485	T12486	arg1Of	lower,in
R9538	T12489	T12486	arg2Of	cultures,in
R9539	T12489	T12487	arg1Of	cultures,the
R9540	T12489	T12488	arg1Of	cultures,PBMC
R9541	T12489	T12490	arg2Of	cultures,infected
R9542	T12490	T12491	arg1Of	infected,with
R9543	T12490	T12504	arg1Of	infected,","
R9544	T12490	T12505	arg1Of	infected,in
R9545	T12493	T12492	arg1Of	II-Mut,HIV-1Lai/Bal-env–κB
R9546	T12493	T12494	arg1Of	II-Mut,","
R9547	T12494	T12497	arg1Of	",",and
R9548	T12496	T12494	arg2Of	I+II-Mut,","
R9549	T12496	T12495	arg1Of	I+II-Mut,HIV-1Lai/Bal-env-κB
R9550	T12497	T12500	arg1Of	and,but
R9551	T12498	T12497	arg2Of	HIV-1Lai/Bal-env-N5-Mut,and
R9552	T12500	T12491	arg2Of	but,with
R9553	T12500	T12499	arg1Of	but,","
R9554	T12500	T12501	arg1Of	but,not
R9555	T12503	T12500	arg2Of	I-Mut,but
R9556	T12503	T12502	arg1Of	I-Mut,HIV-1Lai/Bal-env-κB
R9557	T12506	T12505	arg2Of	comparison,in
R9558	T12506	T12507	arg1Of	comparison,to
R9559	T12509	T12507	arg2Of	virus,to
R9560	T12509	T12508	arg1Of	virus,wild-type
R9561	T12509	T12510	arg1Of	virus,(
R9562	T12512	T12510	arg2Of	4C,(
R9563	T12512	T12511	arg1Of	4C,Figure
R9564	T12513	T12510	arg3Of	),(
R9565	T12514	T12515	arg1Of	None,of
R9566	T12514	T12519	arg1Of	None,abolished
R9567	T12517	T12515	arg2Of	mutations,of
R9568	T12517	T12516	arg1Of	mutations,the
R9569	T12519	T12518	arg1Of	abolished,completely
R9570	T12521	T12519	arg2Of	induction,abolished
R9571	T12521	T12520	arg1Of	induction,viral
R9572	T12521	T12522	arg1Of	induction,by
R9573	T12524	T12522	arg2Of	co-infection,by
R9574	T12524	T12523	arg1Of	co-infection,MTb
R9575	T12528	T12527	arg1Of	replication,the
R9576	T12528	T12529	arg1Of	replication,of
R9577	T12528	T12533	arg1Of	replication,was
R9578	T12528	T12534	arg2Of	replication,impaired
R9579	T12528	T12547	arg1Of	replication,consistent
R9580	T12532	T12529	arg2Of	virus,of
R9581	T12532	T12530	arg1Of	virus,each
R9582	T12532	T12531	arg1Of	virus,mutant
R9583	T12534	T12525	arg1Of	impaired,However
R9584	T12534	T12526	arg1Of	impaired,","
R9585	T12534	T12533	arg2Of	impaired,was
R9586	T12534	T12535	arg1Of	impaired,to
R9587	T12534	T12540	arg1Of	impaired,in
R9588	T12534	T12546	arg1Of	impaired,","
R9589	T12534	T12547	modOf	impaired,consistent
R9590	T12538	T12537	arg1Of	significant,more
R9591	T12539	T12535	arg2Of	extent,to
R9592	T12539	T12536	arg1Of	extent,a
R9593	T12539	T12538	arg1Of	extent,significant
R9594	T12542	T12540	arg2Of	context,in
R9595	T12542	T12541	arg1Of	context,the
R9596	T12542	T12543	arg1Of	context,of
R9597	T12545	T12543	arg2Of	co-infection,of
R9598	T12545	T12544	arg1Of	co-infection,MTb
R9599	T12547	T12548	arg1Of	consistent,with
R9600	T12550	T12548	arg2Of	roles,with
R9601	T12550	T12549	arg1Of	roles,important
R9602	T12550	T12551	arg1Of	roles,for
R9603	T12553	T12554	arg1Of	NF-κB,and
R9604	T12554	T12551	arg2Of	and,for
R9605	T12554	T12552	arg1Of	and,both
R9606	T12554	T12556	arg1Of	and,in
R9607	T12555	T12554	arg2Of	NFAT5,and
R9608	T12559	T12556	arg2Of	replication,in
R9609	T12559	T12557	arg1Of	replication,MTb-induced
R9610	T12559	T12558	arg1Of	replication,HIV-1
R9611	T12562	T12560	arg1Of	examine,To
R9612	T12562	T12561	arg1Of	examine,specifically
R9613	T12565	T12562	arg2Of	impact,examine
R9614	T12565	T12563	arg1Of	impact,the
R9615	T12565	T12564	arg1Of	impact,functional
R9616	T12565	T12566	arg1Of	impact,of
R9617	T12567	T12566	arg2Of	NF-κB,of
R9618	T12572	T12568	arg2Of	usage,and
R9619	T12572	T12569	arg1Of	usage,NFAT5
R9620	T12572	T12570	arg1Of	usage,binding
R9621	T12572	T12571	arg1Of	usage,site
R9622	T12574	T12573	arg2Of	MDM,in
R9623	T12579	T12577	arg2Of	infected,are
R9624	T12579	T12578	arg1Of	infected,efficiently
R9625	T12582	T12579	arg1Of	pathogens,infected
R9626	T12582	T12580	arg2Of	pathogens,by
R9627	T12582	T12581	arg1Of	pathogens,both
R9628	T12584	T12586	arg1Of	we,isolated
R9629	T12584	T12593	arg1Of	we,infected
R9630	T12586	T12588	arg1Of	isolated,from
R9631	T12586	T12592	arg1Of	isolated,and
R9632	T12587	T12586	arg2Of	MDM,isolated
R9633	T12591	T12588	arg2Of	donors,from
R9634	T12591	T12589	arg1Of	donors,four
R9635	T12591	T12590	arg1Of	donors,normal
R9636	T12592	T12583	arg1Of	and,","
R9637	T12592	T12585	arg1Of	and,next
R9638	T12593	T12592	arg2Of	infected,and
R9639	T12593	T12596	arg1Of	infected,with
R9640	T12595	T12593	arg2Of	cells,infected
R9641	T12595	T12594	arg1Of	cells,these
R9642	T12598	T12596	arg2Of	TCID50,with
R9643	T12598	T12597	arg1Of	TCID50,1000
R9644	T12598	T12599	arg1Of	TCID50,of
R9645	T12601	T12599	arg2Of	HIV-1Lai/Bal-env,of
R9646	T12601	T12600	arg1Of	HIV-1Lai/Bal-env,wild-type
R9647	T12603	T12602	arg2Of	with,or
R9648	T12609	T12604	arg1Of	I-Mut,the
R9649	T12609	T12605	arg1Of	I-Mut,mutant
R9650	T12609	T12606	arg1Of	I-Mut,viral
R9651	T12609	T12607	arg1Of	I-Mut,clones
R9652	T12609	T12608	arg1Of	I-Mut,HIV-1Lai/Bal-env-κB
R9653	T12609	T12610	arg1Of	I-Mut,","
R9654	T12609	T12613	arg1Of	I-Mut,","
R9655	T12612	T12610	arg2Of	II-Mut,","
R9656	T12612	T12611	arg1Of	II-Mut,HIV-1Lai/Bal-env-κB
R9657	T12613	T12603	arg2Of	",",with
R9658	T12615	T12613	arg2Of	I+II-Mut,","
R9659	T12615	T12614	arg1Of	I+II-Mut,HIV-1Lai/Bal-env-κB
R9660	T12617	T12616	arg1Of	or,","
R9661	T12618	T12617	arg2Of	HIV-1Lai/Bal-env-N5-Mut.,or
R9662	T12621	T12619	arg2Of	incubation,After
R9663	T12621	T12620	arg1Of	incubation,overnight
R9664	T12624	T12623	arg1Of	cultures,cell
R9665	T12624	T12625	arg1Of	cultures,were
R9666	T12624	T12626	arg2Of	cultures,co-infected
R9667	T12626	T12622	arg1Of	co-infected,","
R9668	T12626	T12625	arg2Of	co-infected,were
R9669	T12626	T12627	arg1Of	co-infected,with
R9670	T12628	T12627	arg2Of	MTb,with
R9671	T12628	T12629	arg1Of	MTb,(
R9672	T12630	T12629	arg2Of	CDC1551,(
R9673	T12631	T12629	arg3Of	),(
R9674	T12633	T12632	arg2Of	left,or
R9675	T12634	T12635	arg1Of	infected,with
R9676	T12636	T12635	arg2Of	virus,with
R9677	T12636	T12637	arg1Of	virus,alone
R9678	T12638	T12639	arg1Of	Supernatants,were
R9679	T12638	T12640	arg2Of	Supernatants,collected
R9680	T12640	T12639	arg2Of	collected,were
R9681	T12640	T12641	arg1Of	collected,at
R9682	T12640	T12651	arg1Of	collected,and
R9683	T12643	T12644	arg1Of	4,","
R9684	T12644	T12647	arg1Of	",",and
R9685	T12645	T12644	arg2Of	7,","
R9686	T12647	T12641	arg2Of	and,at
R9687	T12647	T12642	arg1Of	and,days
R9688	T12647	T12646	arg1Of	and,","
R9689	T12650	T12647	arg2Of	infection,and
R9690	T12650	T12648	arg1Of	infection,12
R9691	T12650	T12649	arg1Of	infection,post-HIV-1
R9692	T12653	T12652	arg1Of	replication,virus
R9693	T12653	T12654	arg1Of	replication,was
R9694	T12653	T12655	arg2Of	replication,measured
R9695	T12655	T12651	arg2Of	measured,and
R9696	T12655	T12654	arg2Of	measured,was
R9697	T12657	T12656	arg2Of	shown,As
R9698	T12657	T12658	arg1Of	shown,in
R9699	T12660	T12661	arg1Of	5A,and
R9700	T12661	T12658	arg2Of	and,in
R9701	T12661	T12659	arg1Of	and,Figures
R9702	T12662	T12661	arg2Of	5C,and
R9703	T12664	T12665	arg1Of	in,the
R9704	T12664	T12667	arg1Of	in,of
R9705	T12666	T12664	arg2Of	absence,in
R9706	T12669	T12664	arg3Of	co-infection,in
R9707	T12669	T12668	arg1Of	co-infection,MTb
R9708	T12671	T12672	arg1Of	replication,of
R9709	T12676	T12672	arg2Of	clones,of
R9710	T12676	T12673	arg1Of	clones,mutant
R9711	T12676	T12674	arg1Of	clones,viral
R9712	T12676	T12675	arg1Of	clones,molecular
R9713	T12679	T12678	arg1Of	I-Mut,HIV-1Lai/Bal-env-κB
R9714	T12679	T12680	arg1Of	I-Mut,(
R9715	T12679	T12685	arg1Of	I-Mut,","
R9716	T12681	T12680	arg2Of	p,(
R9717	T12681	T12682	arg1Of	p,<
R9718	T12681	T12683	arg1Of	p,0.05
R9719	T12684	T12680	arg3Of	),(
R9720	T12685	T12694	arg1Of	",",and
R9721	T12687	T12685	arg2Of	II-Mut,","
R9722	T12687	T12686	arg1Of	II-Mut,HIV-1Lai/Bal-env-κB
R9723	T12687	T12688	arg1Of	II-Mut,(
R9724	T12689	T12688	arg2Of	p,(
R9725	T12689	T12690	arg1Of	p,<
R9726	T12689	T12691	arg1Of	p,0.01
R9727	T12692	T12688	arg3Of	),(
R9728	T12694	T12671	arg1Of	and,replication
R9729	T12694	T12677	arg1Of	and,(
R9730	T12694	T12693	arg1Of	and,","
R9731	T12694	T12711	arg1Of	and,were
R9732	T12694	T12713	arg2Of	and,reduced
R9733	T12696	T12695	arg1Of	I+II-Mut,HIV-1Lai/Bal-env-κB
R9734	T12696	T12697	arg1Of	I+II-Mut,(
R9735	T12696	T12704	arg1Of	I+II-Mut,as
R9736	T12698	T12697	arg2Of	p,(
R9737	T12698	T12699	arg1Of	p,<
R9738	T12698	T12700	arg1Of	p,0.01
R9739	T12701	T12697	arg3Of	),(
R9740	T12704	T12694	arg2Of	as,and
R9741	T12704	T12702	arg1Of	as,as
R9742	T12704	T12703	arg1Of	as,well
R9743	T12705	T12704	arg2Of	HIV-1Lai/Bal-env-N5-Mut,as
R9744	T12705	T12706	arg1Of	HIV-1Lai/Bal-env-N5-Mut,(
R9745	T12707	T12706	arg2Of	p,(
R9746	T12707	T12708	arg1Of	p,<
R9747	T12707	T12709	arg1Of	p,0.01
R9748	T12710	T12706	arg3Of	),(
R9749	T12713	T12656	arg1Of	reduced,As
R9750	T12713	T12663	arg1Of	reduced,","
R9751	T12713	T12664	arg1Of	reduced,in
R9752	T12713	T12670	arg1Of	reduced,","
R9753	T12713	T12711	arg2Of	reduced,were
R9754	T12713	T12712	arg1Of	reduced,significantly
R9755	T12713	T12714	arg1Of	reduced,in
R9756	T12714	T12716	arg1Of	in,to
R9757	T12715	T12714	arg2Of	comparison,in
R9758	T12719	T12714	arg3Of	virus,in
R9759	T12719	T12717	arg1Of	virus,the
R9760	T12719	T12718	arg1Of	virus,wild-type
R9761	T12719	T12720	arg1Of	virus,(
R9762	T12722	T12720	arg2Of	5A–5C,(
R9763	T12722	T12721	arg1Of	5A–5C,Figures
R9764	T12723	T12720	arg3Of	),(
R9765	T12726	T12725	arg1Of	cultures,the
R9766	T12726	T12727	arg1Of	cultures,were
R9767	T12726	T12728	arg2Of	cultures,co-infected
R9768	T12728	T12724	arg2Of	co-infected,When
R9769	T12728	T12727	arg2Of	co-infected,were
R9770	T12728	T12729	arg1Of	co-infected,with
R9771	T12730	T12729	arg2Of	MTb,with
R9772	T12733	T12732	arg1Of	levels,p24
R9773	T12733	T12734	arg1Of	levels,increased
R9774	T12734	T12724	arg1Of	increased,When
R9775	T12734	T12731	arg1Of	increased,","
R9776	T12734	T12735	arg1Of	increased,when
R9777	T12737	T12736	arg1Of	cells,the
R9778	T12737	T12738	arg1Of	cells,were
R9779	T12737	T12739	arg2Of	cells,infected
R9780	T12739	T12735	arg2Of	infected,when
R9781	T12739	T12738	arg2Of	infected,were
R9782	T12739	T12740	arg1Of	infected,with
R9783	T12739	T12749	arg1Of	infected,","
R9784	T12739	T12750	arg1Of	infected,with
R9785	T12743	T12740	arg2Of	wild-type,with
R9786	T12743	T12741	arg1Of	wild-type,either
R9787	T12743	T12742	arg1Of	wild-type,the
R9788	T12743	T12744	arg1Of	wild-type,or
R9789	T12743	T12745	arg1Of	wild-type,","
R9790	T12743	T12746	arg1Of	wild-type,to
R9791	T12748	T12746	arg2Of	levels,to
R9792	T12748	T12747	arg1Of	levels,lower
R9793	T12754	T12750	arg2Of	virus,with
R9794	T12754	T12751	arg1Of	virus,the
R9795	T12754	T12752	arg1Of	virus,κB-I
R9796	T12754	T12753	arg1Of	virus,mutant
R9797	T12754	T12755	arg1Of	virus,(
R9798	T12757	T12755	arg2Of	5B,(
R9799	T12757	T12756	arg1Of	5B,Figure
R9800	T12758	T12755	arg3Of	),(
R9801	T12762	T12761	arg1Of	levels,p24
R9802	T12762	T12763	arg1Of	levels,were
R9803	T12762	T12765	arg2Of	levels,inhibited
R9804	T12765	T12759	arg1Of	inhibited,However
R9805	T12765	T12760	arg1Of	inhibited,","
R9806	T12765	T12763	arg2Of	inhibited,were
R9807	T12765	T12764	arg1Of	inhibited,significantly
R9808	T12765	T12766	arg1Of	inhibited,in
R9809	T12767	T12766	arg2Of	cells,in
R9810	T12767	T12768	arg2Of	cells,infected
R9811	T12768	T12769	arg1Of	infected,with
R9812	T12771	T12769	arg2Of	-N5-Mut,with
R9813	T12771	T12770	arg1Of	-N5-Mut,HIV-1Lai/Bal-env
R9814	T12771	T12772	arg1Of	-N5-Mut,(
R9815	T12771	T12777	arg1Of	-N5-Mut,(
R9816	T12773	T12772	arg2Of	p,(
R9817	T12773	T12774	arg1Of	p,<
R9818	T12773	T12775	arg1Of	p,0.01
R9819	T12776	T12772	arg3Of	),(
R9820	T12779	T12777	arg2Of	5D,(
R9821	T12779	T12778	arg1Of	5D,Figure
R9822	T12780	T12777	arg3Of	),(
R9823	T12784	T12783	arg1Of	levels,p24
R9824	T12784	T12785	arg1Of	levels,were
R9825	T12784	T12787	arg1Of	levels,lower
R9826	T12785	T12781	arg1Of	were,Moreover
R9827	T12785	T12782	arg1Of	were,","
R9828	T12785	T12788	arg1Of	were,at
R9829	T12787	T12785	arg2Of	lower,were
R9830	T12787	T12786	arg1Of	lower,significantly
R9831	T12789	T12788	arg2Of	day,at
R9832	T12789	T12790	arg1Of	day,12
R9833	T12789	T12791	arg1Of	day,in
R9834	T12792	T12791	arg2Of	cultures,in
R9835	T12792	T12793	arg2Of	cultures,infected
R9836	T12793	T12794	arg1Of	infected,with
R9837	T12793	T12800	arg1Of	infected,as
R9838	T12796	T12795	arg1Of	II-Mut,HIV-1Lai/Bal-env-κB
R9839	T12796	T12797	arg1Of	II-Mut,and
R9840	T12797	T12794	arg2Of	and,with
R9841	T12799	T12797	arg2Of	I+II-Mut,and
R9842	T12799	T12798	arg1Of	I+II-Mut,HIV-1Lai/Bal-env-κB
R9843	T12801	T12800	arg2Of	compared,as
R9844	T12801	T12802	arg1Of	compared,to
R9845	T12803	T12802	arg2Of	infection,to
R9846	T12803	T12804	arg1Of	infection,of
R9847	T12805	T12804	arg2Of	cells,of
R9848	T12805	T12806	arg1Of	cells,with
R9849	T12808	T12806	arg2Of	virus,with
R9850	T12808	T12807	arg1Of	virus,wild-type
R9851	T12808	T12809	arg1Of	virus,(
R9852	T12811	T12809	arg2Of	5D,(
R9853	T12811	T12810	arg1Of	5D,Figure
R9854	T12812	T12809	arg3Of	),(
R9855	T12816	T12817	arg1Of	replication,of
R9856	T12816	T12821	arg1Of	replication,with
R9857	T12816	T12839	arg1Of	replication,was
R9858	T12816	T12840	arg2Of	replication,diminished
R9859	T12820	T12817	arg2Of	virus,of
R9860	T12820	T12818	arg1Of	virus,the
R9861	T12820	T12819	arg1Of	virus,mutant
R9862	T12823	T12824	arg1Of	single,","
R9863	T12825	T12824	arg2Of	proximal,","
R9864	T12829	T12821	arg2Of	mutation,with
R9865	T12829	T12822	arg1Of	mutation,the
R9866	T12829	T12823	arg1Of	mutation,single
R9867	T12829	T12825	arg1Of	mutation,proximal
R9868	T12829	T12826	arg1Of	mutation,NF-κB
R9869	T12829	T12827	arg1Of	mutation,binding
R9870	T12829	T12828	arg1Of	mutation,site
R9871	T12829	T12830	arg1Of	mutation,in
R9872	T12834	T12830	arg2Of	element,in
R9873	T12834	T12831	arg1Of	element,the
R9874	T12834	T12832	arg1Of	element,shared
R9875	T12834	T12833	arg1Of	element,NFAT5/NF-κB
R9876	T12834	T12835	arg1Of	element,(
R9877	T12837	T12835	arg2Of	I-Mut,(
R9878	T12837	T12836	arg1Of	I-Mut,HIV-1Lai/Bal-env-κB
R9879	T12838	T12835	arg3Of	),(
R9880	T12840	T12815	arg2Of	diminished,although
R9881	T12840	T12839	arg2Of	diminished,was
R9882	T12842	T12843	arg1Of	this,was
R9883	T12842	T12845	arg1Of	this,significant
R9884	T12843	T12813	arg1Of	was,Notably
R9885	T12843	T12814	arg1Of	was,","
R9886	T12843	T12815	arg1Of	was,although
R9887	T12843	T12841	arg1Of	was,","
R9888	T12843	T12844	arg1Of	was,not
R9889	T12843	T12846	arg1Of	was,at
R9890	T12845	T12843	arg2Of	significant,was
R9891	T12847	T12846	arg2Of	day,at
R9892	T12847	T12848	arg1Of	day,12
R9893	T12847	T12849	arg1Of	day,(
R9894	T12851	T12849	arg2Of	5B–5D,(
R9895	T12851	T12850	arg1Of	5B–5D,Figures
R9896	T12852	T12849	arg3Of	),(
R9897	T12853	T12854	arg1Of	We,note
R9898	T12858	T12856	arg1Of	levels,overall
R9899	T12858	T12857	arg1Of	levels,p24
R9900	T12858	T12859	arg1Of	levels,were
R9901	T12858	T12861	arg1Of	levels,lower
R9902	T12859	T12854	arg2Of	were,note
R9903	T12859	T12855	arg1Of	were,that
R9904	T12861	T12859	arg2Of	lower,were
R9905	T12861	T12860	arg1Of	lower,noticeably
R9906	T12861	T12862	arg1Of	lower,in
R9907	T12864	T12862	arg2Of	cultures,in
R9908	T12864	T12863	arg1Of	cultures,the
R9909	T12864	T12865	arg2Of	cultures,co-infected
R9910	T12865	T12866	arg1Of	co-infected,with
R9911	T12865	T12868	arg1Of	co-infected,compared
R9912	T12867	T12866	arg2Of	MTb,with
R9913	T12869	T12868	arg2Of	with,compared
R9914	T12870	T12869	arg2Of	those,with
R9915	T12870	T12871	arg2Of	those,infected
R9916	T12871	T12872	arg1Of	infected,with
R9917	T12873	T12872	arg2Of	HIV-1,with
R9918	T12873	T12874	arg1Of	HIV-1,alone
R9919	T12875	T12876	arg1Of	This,is
R9920	T12875	T12877	arg1Of	This,consistent
R9921	T12876	T12911	arg1Of	is,[
R9922	T12877	T12876	arg2Of	consistent,is
R9923	T12877	T12878	arg1Of	consistent,with
R9924	T12880	T12878	arg2Of	observations,with
R9925	T12880	T12879	arg1Of	observations,previous
R9926	T12880	T12881	arg1Of	observations,showing
R9927	T12880	T12910	arg1Of	observations,–
R9928	T12884	T12883	arg1Of	infection,MTb
R9929	T12884	T12885	arg1Of	infection,of
R9930	T12884	T12891	arg1Of	infection,vivo
R9931	T12884	T12892	arg1Of	infection,suppresses
R9932	T12889	T12885	arg2Of	cultures,of
R9933	T12889	T12886	arg1Of	cultures,human
R9934	T12889	T12887	arg1Of	cultures,primary
R9935	T12889	T12888	arg1Of	cultures,macrophage
R9936	T12891	T12890	arg1Of	vivo,ex
R9937	T12892	T12881	arg2Of	suppresses,showing
R9938	T12892	T12882	arg1Of	suppresses,that
R9939	T12892	T12907	arg1Of	suppresses,[
R9940	T12894	T12893	arg1Of	infection,HIV-1
R9941	T12894	T12895	arg1Of	infection,due
R9942	T12894	T12899	arg1Of	infection,and
R9943	T12895	T12896	arg1Of	due,to
R9944	T12898	T12895	arg2Of	synthesis,due
R9945	T12898	T12897	arg1Of	synthesis,chemokine
R9946	T12899	T12892	arg2Of	and,suppresses
R9947	T12902	T12899	arg2Of	expression,and
R9948	T12902	T12900	arg1Of	expression,the
R9949	T12902	T12901	arg2Of	expression,enhanced
R9950	T12902	T12903	arg1Of	expression,of
R9951	T12906	T12903	arg2Of	factors,of
R9952	T12906	T12904	arg1Of	factors,cellular
R9953	T12906	T12905	arg1Of	factors,inhibitory
R9954	T12908	T12907	arg2Of	48,[
R9955	T12909	T12907	arg3Of	],[
R9956	T12912	T12911	arg2Of	50,[
R9957	T12913	T12911	arg3Of	],[
R9958	T12916	T12917	arg1Of	NF-κB,is
R9959	T12916	T12919	arg2Of	NF-κB,activated
R9960	T12919	T12917	arg2Of	activated,is
R9961	T12919	T12918	arg1Of	activated,efficiently
R9962	T12919	T12920	arg1Of	activated,in
R9963	T12919	T12923	arg1Of	activated,in
R9964	T12919	T12932	arg1Of	activated,as
R9965	T12919	T12939	arg1Of	activated,","
R9966	T12922	T12920	arg2Of	MDM,in
R9967	T12922	T12921	arg1Of	MDM,primary
R9968	T12923	T12925	arg1Of	in,to
R9969	T12923	T12931	arg1Of	in,and
R9970	T12924	T12923	arg2Of	response,in
R9971	T12927	T12923	arg3Of	agonists,in
R9972	T12927	T12926	arg1Of	agonists,TLR
R9973	T12927	T12928	arg1Of	agonists,[
R9974	T12929	T12928	arg2Of	51,[
R9975	T12930	T12928	arg3Of	],[
R9976	T12932	T12931	arg2Of	as,and
R9977	T12933	T12934	arg1Of	we,have
R9978	T12933	T12935	arg1Of	we,shown
R9979	T12935	T12932	arg2Of	shown,as
R9980	T12935	T12934	arg2Of	shown,have
R9981	T12935	T12936	arg1Of	shown,in
R9982	T12937	T12936	arg2Of	Figure,in
R9983	T12937	T12938	arg1Of	Figure,2
R9984	T12939	T12914	arg2Of	",",Given
R9985	T12939	T12915	arg1Of	",",that
R9986	T12939	T12951	arg1Of	",",are
R9987	T12942	T12940	arg1Of	expression,NFAT5
R9988	T12942	T12941	arg1Of	expression,gene
R9989	T12942	T12943	arg1Of	expression,is
R9990	T12942	T12945	arg2Of	expression,induced
R9991	T12945	T12939	arg2Of	induced,","
R9992	T12945	T12943	arg2Of	induced,is
R9993	T12945	T12944	arg1Of	induced,also
R9994	T12948	T12945	arg1Of	agonists,induced
R9995	T12948	T12946	arg2Of	agonists,by
R9996	T12948	T12947	arg1Of	agonists,TLR
R9997	T12948	T12949	arg1Of	agonists,","
R9998	T12950	T12949	arg2Of	MDM,","
R9999	T12951	T12914	modOf	are,Given
R10000	T12955	T12951	arg2Of	system,are
R10001	T12955	T12952	arg1Of	system,a
R10002	T12955	T12953	arg1Of	system,suitable
R10003	T12955	T12954	arg1Of	system,experimental
R10004	T12955	T12956	modOf	system,to
R10005	T12955	T12957	arg1Of	system,analyze
R10006	T12957	T12956	arg1Of	analyze,to
R10007	T12959	T12957	arg2Of	effect,analyze
R10008	T12959	T12958	arg1Of	effect,the
R10009	T12959	T12960	arg1Of	effect,of
R10010	T12959	T12967	arg1Of	effect,on
R10011	T12961	T12962	arg1Of	NF-κB,versus
R10012	T12963	T12962	arg2Of	NFAT5,versus
R10013	T12966	T12960	arg2Of	mutations,of
R10014	T12966	T12961	arg1Of	mutations,NF-κB
R10015	T12966	T12963	arg1Of	mutations,NFAT5
R10016	T12966	T12964	arg1Of	mutations,binding
R10017	T12966	T12965	arg1Of	mutations,site
R10018	T12969	T12967	arg2Of	replication,on
R10019	T12969	T12968	arg1Of	replication,virus
R10020	T12969	T12970	arg1Of	replication,in
R10021	T12972	T12970	arg2Of	MDM,in
R10022	T12972	T12971	arg2Of	MDM,isolated
R10023	T12972	T12973	arg1Of	MDM,in
R10024	T12975	T12976	arg1Of	absence,or
R10025	T12976	T12973	arg2Of	or,in
R10026	T12976	T12974	arg1Of	or,the
R10027	T12976	T12978	arg1Of	or,of
R10028	T12977	T12976	arg2Of	presence,or
R10029	T12980	T12978	arg2Of	co-infection,of
R10030	T12980	T12979	arg1Of	co-infection,MTb
R10031	T12981	T12982	arg1Of	Taken,together
R10032	T12985	T12984	arg1Of	results,the
R10033	T12985	T12986	arg1Of	results,from
R10034	T12985	T12992	arg1Of	results,demonstrate
R10035	T12987	T12988	arg1Of	PBMC,and
R10036	T12989	T12988	arg2Of	MDM,and
R10037	T12991	T12986	arg2Of	experiments,from
R10038	T12991	T12987	arg1Of	experiments,PBMC
R10039	T12991	T12989	arg1Of	experiments,MDM
R10040	T12991	T12990	arg1Of	experiments,co-infection
R10041	T12992	T12981	modOf	demonstrate,Taken
R10042	T12992	T12983	arg1Of	demonstrate,","
R10043	T12998	T12994	arg1Of	site,the
R10044	T12998	T12995	arg2Of	site,conserved
R10045	T12998	T12996	arg1Of	site,NFAT5
R10046	T12998	T12997	arg1Of	site,binding
R10047	T12998	T12999	arg1Of	site,plays
R10048	T12999	T12992	arg2Of	plays,demonstrate
R10049	T12999	T12993	arg1Of	plays,that
R10050	T12999	T13000	arg1Of	plays,as
R10051	T12999	T13005	arg1Of	plays,in
R10052	T12999	T13010	arg1Of	plays,as
R10053	T13004	T13000	arg2Of	role,as
R10054	T13004	T13001	arg1Of	role,important
R10055	T13004	T13002	arg1Of	role,a
R10056	T13004	T13003	arg1Of	role,transcriptional
R10057	T13007	T13005	arg2Of	regulation,in
R10058	T13007	T13006	arg1Of	regulation,LTR
R10059	T13007	T13008	arg1Of	regulation,by
R10060	T13009	T13008	arg2Of	MTb,by
R10061	T13011	T13010	arg2Of	do,as
R10062	T13014	T13011	arg1Of	sites,do
R10063	T13014	T13012	arg1Of	sites,the
R10064	T13014	T13013	arg1Of	sites,NF-κB
R18449	T25313	T25311	arg1Of	replication,MTb-induced
R18450	T25313	T25312	arg1Of	replication,HIV-1
R18451	T25313	T25314	arg1Of	replication,in
R18452	T25313	T25316	arg1Of	replication,depends
R18453	T25315	T25314	arg2Of	PBMC,in
R18454	T25316	T25317	arg1Of	depends,on
R18455	T25318	T25317	arg2Of	binding,on
R18456	T25318	T25319	arg1Of	binding,of
R18457	T25318	T25323	arg1Of	binding,to
R18458	T25320	T25321	arg1Of	NFAT5,and
R18459	T25321	T25319	arg2Of	and,of
R18460	T25322	T25321	arg2Of	NF-κB,and
R18461	T25325	T25323	arg2Of	LTR,to
R18462	T25325	T25324	arg1Of	LTR,the
R18463	T25327	T25326	arg1Of	disruption,Specific
R18464	T25327	T25328	arg1Of	disruption,of
R18465	T25327	T25335	arg1Of	disruption,in
R18466	T25327	T25341	arg1Of	disruption,inhibits
R18467	T25330	T25331	arg1Of	NF-κB,or
R18468	T25332	T25331	arg2Of	NFAT5,or
R18469	T25334	T25328	arg2Of	sites,of
R18470	T25334	T25329	arg1Of	sites,the
R18471	T25334	T25330	arg1Of	sites,NF-κB
R18472	T25334	T25332	arg1Of	sites,NFAT5
R18473	T25334	T25333	arg1Of	sites,binding
R18474	T25340	T25335	arg2Of	LTR,in
R18475	T25340	T25336	arg1Of	LTR,the
R18476	T25340	T25337	arg1Of	LTR,HIV-1
R18477	T25340	T25338	arg1Of	LTR,subtype
R18478	T25340	T25339	arg1Of	LTR,B
R18479	T25341	T25348	arg1Of	inhibits,after
R18480	T25344	T25341	arg2Of	replication,inhibits
R18481	T25344	T25342	arg1Of	replication,R5-tropic
R18482	T25344	T25343	arg1Of	replication,virus
R18483	T25344	T25345	arg1Of	replication,in
R18484	T25347	T25345	arg2Of	PBMC,in
R18485	T25347	T25346	arg1Of	PBMC,human
R18486	T25349	T25348	arg2Of	co-infection,after
R18487	T25349	T25350	arg1Of	co-infection,with
R18488	T25351	T25350	arg2Of	MTb,with
R18489	T25352	T25353	arg1Of	PBMC,from
R18490	T25352	T25357	arg1Of	PBMC,were
R18491	T25352	T25358	arg2Of	PBMC,infected
R18492	T25356	T25353	arg2Of	donors,from
R18493	T25356	T25354	arg1Of	donors,four
R18494	T25356	T25355	arg1Of	donors,normal
R18495	T25358	T25357	arg2Of	infected,were
R18496	T25358	T25359	arg1Of	infected,with
R18497	T25358	T25377	arg1Of	infected,and
R18498	T25362	T25360	arg1Of	HIV-1Lai/Bal-env-WT,1000
R18499	T25362	T25361	arg1Of	HIV-1Lai/Bal-env-WT,TCID50
R18500	T25362	T25363	arg1Of	HIV-1Lai/Bal-env-WT,or
R18501	T25363	T25368	arg1Of	or,","
R18502	T25365	T25364	arg1Of	mutants,the
R18503	T25367	T25363	arg2Of	I-Mut,or
R18504	T25367	T25365	arg1Of	I-Mut,mutants
R18505	T25367	T25366	arg1Of	I-Mut,HIV-1Lai/Bal-env-κB
R18506	T25368	T25371	arg1Of	",",","
R18507	T25370	T25368	arg2Of	II-Mut,","
R18508	T25370	T25369	arg1Of	II-Mut,HIV-1Lai/Bal-env-κB
R18509	T25371	T25375	arg1Of	",",or
R18510	T25373	T25371	arg2Of	I+II-Mut,","
R18511	T25373	T25372	arg1Of	I+II-Mut,HIV-1Lai/Bal-env-κB
R18512	T25375	T25359	arg2Of	or,with
R18513	T25375	T25374	arg1Of	or,","
R18514	T25376	T25375	arg2Of	HIV-1Lai/Bal-env-N5-Mut,or
R18515	T25381	T25380	arg2Of	A,(
R18516	T25381	T25383	arg1Of	A,left
R18517	T25381	T25390	arg1Of	A,co-infected
R18518	T25382	T25380	arg3Of	),(
R18519	T25383	T25377	arg2Of	left,and
R18520	T25383	T25378	arg1Of	left,either
R18521	T25383	T25379	arg1Of	left,;
R18522	T25383	T25390	modOf	left,co-infected
R18523	T25384	T25386	arg1Of	untreated,or
R18524	T25386	T25385	arg1Of	or,","
R18525	T25388	T25383	arg2Of	B,left
R18526	T25388	T25384	arg1Of	B,untreated
R18527	T25388	T25387	arg2Of	B,(
R18528	T25389	T25387	arg3Of	),(
R18529	T25390	T25391	arg1Of	co-infected,with
R18530	T25394	T25391	arg2Of	CDC1551,with
R18531	T25394	T25392	arg1Of	CDC1551,MTb
R18532	T25394	T25393	arg1Of	CDC1551,isolate
R18533	T25394	T25395	arg1Of	CDC1551,(
R18534	T25397	T25395	arg2Of	cells∶bacilli,(
R18535	T25397	T25396	arg1Of	cells∶bacilli,10∶1
R18536	T25398	T25395	arg3Of	),(
R18537	T25401	T25399	arg1Of	levels,Viral
R18538	T25401	T25400	arg1Of	levels,p24
R18539	T25401	T25402	arg1Of	levels,in
R18540	T25401	T25405	arg1Of	levels,were
R18541	T25401	T25406	arg2Of	levels,measured
R18542	T25404	T25402	arg2Of	supernatants,in
R18543	T25404	T25403	arg1Of	supernatants,culture
R18544	T25406	T25405	arg2Of	measured,were
R18545	T25406	T25407	arg1Of	measured,at
R18546	T25406	T25410	arg1Of	measured,","
R18547	T25409	T25407	arg2Of	4,at
R18548	T25409	T25408	arg1Of	4,days
R18549	T25411	T25412	arg1Of	7,and
R18550	T25413	T25412	arg2Of	12,and
R18551	T25416	T25415	arg2Of	C,(
R18552	T25417	T25415	arg3Of	),(
R18553	T25418	T25411	arg1Of	Histograms,7
R18554	T25418	T25413	arg1Of	Histograms,12
R18555	T25418	T25414	arg1Of	Histograms,post-infection.
R18556	T25418	T25415	arg1Of	Histograms,(
R18557	T25418	T25419	arg1Of	Histograms,show
R18558	T25419	T25410	arg2Of	show,","
R18559	T25419	T25423	arg1Of	show,at
R18560	T25419	T25426	arg1Of	show,in
R18561	T25422	T25419	arg2Of	levels,show
R18562	T25422	T25420	arg1Of	levels,viral
R18563	T25422	T25421	arg1Of	levels,p24
R18564	T25424	T25423	arg2Of	day,at
R18565	T25424	T25425	arg1Of	day,12
R18566	T25429	T25428	arg1Of	uninfected,MTb
R18567	T25432	T25427	arg1Of	bars,the
R18568	T25432	T25429	arg1Of	bars,uninfected
R18569	T25432	T25430	arg2Of	bars,(
R18570	T25432	T25431	arg1Of	bars,grey
R18571	T25432	T25434	arg1Of	bars,and
R18572	T25433	T25430	arg3Of	),(
R18573	T25434	T25426	arg2Of	and,in
R18574	T25436	T25437	arg1Of	co-infected,(
R18575	T25439	T25437	arg2Of	bars,(
R18576	T25439	T25438	arg1Of	bars,black
R18577	T25440	T25437	arg3Of	),(
R18578	T25442	T25434	arg2Of	cultures,and
R18579	T25442	T25435	arg1Of	cultures,MTb
R18580	T25442	T25436	arg1Of	cultures,co-infected
R18581	T25442	T25441	arg1Of	cultures,PBMC
R18582	T25443	T25444	arg1Of	Replication,of
R18583	T25443	T25448	arg1Of	Replication,was
R18584	T25443	T25449	arg2Of	Replication,compared
R18585	T25447	T25444	arg2Of	viruses,of
R18586	T25447	T25445	arg1Of	viruses,the
R18587	T25447	T25446	arg1Of	viruses,mutant
R18588	T25449	T25448	arg2Of	compared,was
R18589	T25449	T25450	arg1Of	compared,to
R18590	T25449	T25454	arg1Of	compared,under
R18591	T25449	T25472	arg1Of	compared,<0.0
R18592	T25449	T25479	arg1Of	compared,0
R18593	T25449	T25480	arg1Of	compared,"1,"
R18594	T25453	T25450	arg2Of	replication,to
R18595	T25453	T25451	arg1Of	replication,wild-type
R18596	T25453	T25452	arg1Of	replication,virus
R18597	T25458	T25454	arg2Of	conditions,under
R18598	T25458	T25455	arg1Of	conditions,the
R18599	T25458	T25456	arg1Of	conditions,same
R18600	T25458	T25457	arg1Of	conditions,experimental
R18601	T25458	T25459	arg1Of	conditions,(
R18602	T25458	T25468	arg1Of	conditions,.
R18603	T25458	T25469	arg1Of	conditions,*
R18604	T25460	T25461	arg1Of	without,and
R18605	T25461	T25459	arg2Of	and,(
R18606	T25462	T25461	arg2Of	with,and
R18607	T25464	T25460	arg2Of	co-infection,without
R18608	T25464	T25462	arg2Of	co-infection,with
R18609	T25464	T25463	arg1Of	co-infection,MTb
R18610	T25464	T25465	arg1Of	co-infection,","
R18611	T25464	T25466	arg1Of	co-infection,respectively
R18612	T25467	T25459	arg3Of	),(
R18613	T25470	T25469	arg2Of	",",*
R18614	T25470	T25471	arg1Of	",",p
R18615	T25472	T25473	arg1Of	<0.0,5
R18616	T25474	T25475	arg1Of	; ,*
R18617	T25476	T25475	arg2Of	,
R18618	T25476	T25477	arg1Of	*,","
R18619	T25478	T25473	arg2Of	p<0.,5
R18620	T25478	T25474	arg1Of	p<0.,;
R18621	T25481	T25480	arg2Of	as compa,"1,"
R18622	T25481	T25482	arg1Of	as compa,re
R18623	T25483	T25482	arg2Of	d to HIV-1Lai/Bal-E,re
R18843	T25891	T25892	arg1Of	Disruption,of
R18844	T25891	T25897	arg1Of	Disruption,in
R18845	T25891	T25900	arg1Of	Disruption,inhibits
R18846	T25893	T25894	arg1Of	NF-κB,or
R18847	T25895	T25894	arg2Of	NFAT5,or
R18848	T25896	T25893	arg1Of	sites,NF-κB
R18849	T25896	T25892	arg2Of	sites,of
R18850	T25896	T25895	arg1Of	sites,NFAT5
R18851	T25899	T25897	arg2Of	LTR,in
R18852	T25899	T25898	arg1Of	LTR,the
R18853	T25903	T25900	arg2Of	replication,inhibits
R18854	T25903	T25901	arg1Of	replication,MTb-induced
R18855	T25903	T25902	arg1Of	replication,HIV-1
R18856	T25903	T25904	arg1Of	replication,in
R18857	T25905	T25904	arg2Of	MDM,in
R18858	T25906	T25907	arg1Of	MDM,from
R18859	T25906	T25911	arg1Of	MDM,were
R18860	T25906	T25912	arg2Of	MDM,infected
R18861	T25906	T25934	arg1Of	MDM,were
R18862	T25910	T25907	arg2Of	donors,from
R18863	T25910	T25908	arg1Of	donors,four
R18864	T25910	T25909	arg1Of	donors,normal
R18865	T25912	T25911	arg2Of	infected,were
R18866	T25912	T25913	arg1Of	infected,with
R18867	T25912	T25933	arg1Of	infected,and
R18868	T25915	T25914	arg1Of	TCID50,1000
R18869	T25915	T25916	arg1Of	TCID50,of
R18870	T25915	T25918	arg1Of	TCID50,or
R18871	T25917	T25916	arg2Of	HIV-1Lai/Bal-env–WT,of
R18872	T25918	T25913	arg2Of	or,with
R18873	T25920	T25919	arg1Of	mutants,the
R18874	T25922	T25921	arg1Of	I-Mut,HIV-1Lai/Bal-env-κB
R18875	T25922	T25923	arg1Of	I-Mut,","
R18876	T25923	T25926	arg1Of	",",","
R18877	T25925	T25923	arg2Of	II-Mut,","
R18878	T25925	T25924	arg1Of	II-Mut,HIV-1Lai/Bal-env-κB
R18879	T25926	T25930	arg1Of	",",or
R18880	T25928	T25926	arg2Of	I+II-Mut,","
R18881	T25928	T25927	arg1Of	I+II-Mut,HIV-1Lai/Bal-env-κB
R18882	T25930	T25918	arg2Of	or,or
R18883	T25930	T25920	arg1Of	or,mutants
R18884	T25930	T25929	arg1Of	or,","
R18885	T25931	T25930	arg2Of	HIV-1Lai/Bal-env-N5-Mut,or
R18886	T25933	T25932	arg1Of	and,","
R18887	T25934	T25933	arg2Of	were,and
R18888	T25937	T25934	arg2Of	A,were
R18889	T25937	T25935	arg1Of	A,either
R18890	T25937	T25936	arg2Of	A,(
R18891	T25937	T25939	arg2Of	A,left
R18892	T25937	T25940	arg2Of	A,infected
R18893	T25937	T25948	arg1Of	A,co-infected
R18894	T25938	T25936	arg3Of	),(
R18895	T25940	T25941	arg1Of	infected,with
R18896	T25942	T25943	arg1Of	virus,alone
R18897	T25942	T25944	arg1Of	virus,or
R18898	T25944	T25941	arg2Of	or,with
R18899	T25946	T25944	arg2Of	B,or
R18900	T25946	T25945	arg2Of	B,(
R18901	T25947	T25945	arg3Of	),(
R18902	T25948	T25949	arg1Of	co-infected,with
R18903	T25951	T25949	arg2Of	CDC1551,with
R18904	T25951	T25950	arg1Of	CDC1551,MTb
R18905	T25951	T25952	arg1Of	CDC1551,(
R18906	T25954	T25952	arg2Of	MDM∶bacilli,(
R18907	T25954	T25953	arg1Of	MDM∶bacilli,1∶1
R18908	T25955	T25952	arg3Of	),(
R18909	T25958	T25956	arg1Of	levels,Viral
R18910	T25958	T25957	arg1Of	levels,p24
R18911	T25958	T25959	arg1Of	levels,in
R18912	T25958	T25963	arg1Of	levels,were
R18913	T25958	T25964	arg2Of	levels,measured
R18914	T25962	T25959	arg2Of	supernatants,in
R18915	T25962	T25960	arg1Of	supernatants,the
R18916	T25962	T25961	arg1Of	supernatants,culture
R18917	T25964	T25963	arg2Of	measured,were
R18918	T25964	T25965	arg1Of	measured,at
R18919	T25967	T25968	arg1Of	4,","
R18920	T25968	T25970	arg1Of	",",and
R18921	T25969	T25968	arg2Of	7,","
R18922	T25970	T25965	arg2Of	and,at
R18923	T25970	T25966	arg1Of	and,days
R18924	T25971	T25970	arg2Of	12,and
R18925	T25971	T25972	arg1Of	12,post-infection
R18926	T25973	T25974	arg1Of	Presentation,of
R18927	T25973	T25978	arg1Of	Presentation,at
R18928	T25973	T25981	arg1Of	Presentation,in
R18929	T25973	T25990	arg1Of	Presentation,or
R18930	T25977	T25974	arg2Of	levels,of
R18931	T25977	T25975	arg1Of	levels,viral
R18932	T25977	T25976	arg1Of	levels,p24
R18933	T25979	T25978	arg2Of	day,at
R18934	T25979	T25980	arg1Of	day,12
R18935	T25982	T25981	arg2Of	cultures,in
R18936	T25982	T25983	arg2Of	cultures,infected
R18937	T25983	T25984	arg1Of	infected,with
R18938	T25986	T25985	arg2Of	C,(
R18939	T25987	T25985	arg3Of	),(
R18940	T25988	T25984	arg2Of	HIV-1,with
R18941	T25988	T25985	arg1Of	HIV-1,(
R18942	T25988	T25989	arg1Of	HIV-1,alone
R18943	T25990	T25997	arg1Of	or,are
R18944	T25990	T25998	arg2Of	or,shown
R18945	T25992	T25990	arg2Of	D,or
R18946	T25992	T25991	arg2Of	D,(
R18947	T25992	T25994	arg1Of	D,co-infected
R18948	T25993	T25991	arg3Of	),(
R18949	T25994	T25995	arg1Of	co-infected,with
R18950	T25996	T25995	arg2Of	MTb,with
R18951	T25998	T25997	arg2Of	shown,are
R18952	T25998	T25999	arg1Of	shown,as
R18953	T26000	T25999	arg2Of	histograms.,as
R18954	T26000	T26001	arg1Of	histograms.,(
R18955	T26002	T26003	arg1Of	*,","
R18956	T26004	T26003	arg2Of	p,","
R18957	T26005	T26008	arg1Of	<,**
R18958	T26006	T26007	arg1Of	0.05,;
R18959	T26008	T26006	arg1Of	**,0.05
R18960	T26008	T26009	arg1Of	**,","
R18961	T26010	T26009	arg2Of	p,","
R18962	T26010	T26011	arg1Of	p,<
R18963	T26012	T26001	arg2Of	0.01,(
R18964	T26012	T26002	arg1Of	0.01,*
R18965	T26012	T26005	arg1Of	0.01,<
R18966	T26012	T26013	arg1Of	0.01,","
R18967	T26012	T26014	arg1Of	0.01,as
R18968	T26015	T26014	arg2Of	compared,as
R18969	T26015	T26016	arg1Of	compared,to
R18970	T26017	T26016	arg2Of	HIV-1Lai/Bal-env–WT,to
R18971	T26018	T26001	arg3Of	),(
R9366	T12316	T12317	arg1Of	NF-κB,and
R9368	T12319	T12317	arg2Of	binding,and
R9374	T12326	T12327	arg1Of	induction,of
R9377	T12329	T12327	arg2Of	replication,of
R9465	T12414	T12415	arg1Of	mock-,and
R9466	T12416	T12415	arg2Of	MTb-co-infected,and
R9467	T12417	T12414	arg1Of	cells,mock-
R9468	T12417	T12416	arg1Of	cells,MTb-co-infected
R9469	T12417	T12418	arg1Of	cells,at
R9471	T12420	T12418	arg2Of	timepoints,at
R9472	T12420	T12419	arg1Of	timepoints,all
R9473	T12420	T12421	arg2Of	timepoints,examined
R9474	T12421	T12422	arg1Of	examined,(
R9475	T12424	T12422	arg2Of	4A–4B,(
R9476	T12424	T12423	arg1Of	4A–4B,Figures
R9477	T12425	T12422	arg3Of	),(
R9478	T12427	T12426	arg2Of	depicted,As
R9479	T12427	T12428	arg1Of	depicted,in
R9486	T12435	T12426	arg1Of	",",As
R9460	T12407	T12413	arg1Of	reduced,in
R9461	T12408	T12410	arg1Of	in,to
R9463	T12412	T12408	arg3Of	virus,in
R9464	T12412	T12411	arg1Of	virus,wild-type
R9470	T12417	T12413	arg2Of	cells,in

bionlp-st-ge-2016-test-proteins

Id	Subject	Object	Predicate	Lexical cue
T25874	4362-4365	Protein	denotes	env
T25873	4194-4197	Protein	denotes	p24
T25872	4083-4086	Protein	denotes	p24
T25871	3959-3962	Protein	denotes	env
T13076	3474-3477	Protein	denotes	env
T13075	3433-3436	Protein	denotes	env
T13074	3397-3400	Protein	denotes	env
T13073	3040-3043	Protein	denotes	env
T13072	3007-3010	Protein	denotes	env
T13071	2979-2982	Protein	denotes	env
T13070	2952-2955	Protein	denotes	env
T13069	2903-2906	Protein	denotes	env
T13068	1561-1566	Protein	denotes	NFAT5
T13067	1246-1249	Protein	denotes	env
T13066	1213-1216	Protein	denotes	env
T13065	1180-1183	Protein	denotes	env
T13064	1152-1155	Protein	denotes	env
T13063	1063-1066	Protein	denotes	p24
T13062	969-972	Protein	denotes	env
T13061	935-938	Protein	denotes	env
T13060	907-910	Protein	denotes	env
T13059	880-883	Protein	denotes	env
T13058	475-478	Protein	denotes	p24
T13057	318-321	Protein	denotes	env
T13056	180-185	Protein	denotes	NFAT5
T13055	10-15	Protein	denotes	NFAT5
T25870	3926-3929	Protein	denotes	env
T25869	3898-3901	Protein	denotes	env
T25868	3871-3874	Protein	denotes	env
T25867	3836-3839	Protein	denotes	env
T25286	1969-1972	Protein	denotes	env
T25285	1705-1710	Protein	denotes	NFAT5
T13086	5620-5625	Protein	denotes	NFAT5
T13085	5137-5140	Protein	denotes	p24
T13084	5034-5037	Protein	denotes	env
T13083	4798-4801	Protein	denotes	env
T13082	4767-4770	Protein	denotes	env
T13081	4682-4685	Protein	denotes	p24
T13080	4638-4641	Protein	denotes	env
T13079	4562-4565	Protein	denotes	p24
T13078	4416-4419	Protein	denotes	p24
T13077	3523-3526	Protein	denotes	env
T25292	2318-2321	Protein	denotes	p24
T25291	2207-2210	Protein	denotes	p24
T25290	2092-2095	Protein	denotes	env
T25289	2059-2062	Protein	denotes	env
T25288	2031-2034	Protein	denotes	env
T25287	2004-2007	Protein	denotes	env

bionlp-st-ge-2016-uniprot

Id	Subject	Object	Predicate	Lexical cue
T26033	4194-4197	http://www.uniprot.org/uniprot/P03366	denotes	p24
T26032	4083-4086	http://www.uniprot.org/uniprot/P03366	denotes	p24
T26031	4194-4197	http://www.uniprot.org/uniprot/P04585	denotes	p24
T26030	4083-4086	http://www.uniprot.org/uniprot/P04585	denotes	p24
T26029	4194-4197	http://www.uniprot.org/uniprot/P12497	denotes	p24
T26028	4083-4086	http://www.uniprot.org/uniprot/P12497	denotes	p24
T26027	4194-4197	http://www.uniprot.org/uniprot/P04591	denotes	p24
T26026	4083-4086	http://www.uniprot.org/uniprot/P04591	denotes	p24
T26025	4362-4365	http://www.uniprot.org/uniprot/P04578	denotes	env
T26024	3959-3962	http://www.uniprot.org/uniprot/P04578	denotes	env
T26023	3926-3929	http://www.uniprot.org/uniprot/P04578	denotes	env
T26022	3898-3901	http://www.uniprot.org/uniprot/P04578	denotes	env
T26021	3871-3874	http://www.uniprot.org/uniprot/P04578	denotes	env
T26020	3836-3839	http://www.uniprot.org/uniprot/P04578	denotes	env
T26019	3691-3696	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T25498	2318-2321	http://www.uniprot.org/uniprot/P03366	denotes	p24
T25497	2207-2210	http://www.uniprot.org/uniprot/P03366	denotes	p24
T25496	2318-2321	http://www.uniprot.org/uniprot/P04585	denotes	p24
T25495	2207-2210	http://www.uniprot.org/uniprot/P04585	denotes	p24
T25494	2318-2321	http://www.uniprot.org/uniprot/P12497	denotes	p24
T25493	2207-2210	http://www.uniprot.org/uniprot/P12497	denotes	p24
T25492	2318-2321	http://www.uniprot.org/uniprot/P04591	denotes	p24
T25491	2207-2210	http://www.uniprot.org/uniprot/P04591	denotes	p24
T25490	2092-2095	http://www.uniprot.org/uniprot/P04578	denotes	env
T25489	2059-2062	http://www.uniprot.org/uniprot/P04578	denotes	env
T25488	2031-2034	http://www.uniprot.org/uniprot/P04578	denotes	env
T25487	2004-2007	http://www.uniprot.org/uniprot/P04578	denotes	env
T25486	1969-1972	http://www.uniprot.org/uniprot/P04578	denotes	env
T25485	1769-1774	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T25484	1705-1710	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T13226	5137-5140	http://www.uniprot.org/uniprot/P03366	denotes	p24
T13225	4682-4685	http://www.uniprot.org/uniprot/P03366	denotes	p24
T13224	4562-4565	http://www.uniprot.org/uniprot/P03366	denotes	p24
T13223	4416-4419	http://www.uniprot.org/uniprot/P03366	denotes	p24
T13222	1063-1066	http://www.uniprot.org/uniprot/P03366	denotes	p24
T13221	475-478	http://www.uniprot.org/uniprot/P03366	denotes	p24
T13220	5137-5140	http://www.uniprot.org/uniprot/P04585	denotes	p24
T13219	4682-4685	http://www.uniprot.org/uniprot/P04585	denotes	p24
T13218	4562-4565	http://www.uniprot.org/uniprot/P04585	denotes	p24
T13217	4416-4419	http://www.uniprot.org/uniprot/P04585	denotes	p24
T13216	1063-1066	http://www.uniprot.org/uniprot/P04585	denotes	p24
T13215	475-478	http://www.uniprot.org/uniprot/P04585	denotes	p24
T13214	5137-5140	http://www.uniprot.org/uniprot/P12497	denotes	p24
T13213	4682-4685	http://www.uniprot.org/uniprot/P12497	denotes	p24
T13212	4562-4565	http://www.uniprot.org/uniprot/P12497	denotes	p24
T13211	4416-4419	http://www.uniprot.org/uniprot/P12497	denotes	p24
T13210	1063-1066	http://www.uniprot.org/uniprot/P12497	denotes	p24
T13209	475-478	http://www.uniprot.org/uniprot/P12497	denotes	p24
T13208	5137-5140	http://www.uniprot.org/uniprot/P04591	denotes	p24
T13207	4682-4685	http://www.uniprot.org/uniprot/P04591	denotes	p24
T13206	4562-4565	http://www.uniprot.org/uniprot/P04591	denotes	p24
T13205	4416-4419	http://www.uniprot.org/uniprot/P04591	denotes	p24
T13204	1063-1066	http://www.uniprot.org/uniprot/P04591	denotes	p24
T13203	475-478	http://www.uniprot.org/uniprot/P04591	denotes	p24
T13202	5034-5037	http://www.uniprot.org/uniprot/P04578	denotes	env
T13201	4798-4801	http://www.uniprot.org/uniprot/P04578	denotes	env
T13200	4767-4770	http://www.uniprot.org/uniprot/P04578	denotes	env
T13199	4638-4641	http://www.uniprot.org/uniprot/P04578	denotes	env
T13175	1561-1566	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T13174	180-185	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T13173	10-15	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T13187	1180-1183	http://www.uniprot.org/uniprot/P04578	denotes	env
T13186	1152-1155	http://www.uniprot.org/uniprot/P04578	denotes	env
T13185	969-972	http://www.uniprot.org/uniprot/P04578	denotes	env
T13184	935-938	http://www.uniprot.org/uniprot/P04578	denotes	env
T13183	907-910	http://www.uniprot.org/uniprot/P04578	denotes	env
T13182	880-883	http://www.uniprot.org/uniprot/P04578	denotes	env
T13181	318-321	http://www.uniprot.org/uniprot/P04578	denotes	env
T13180	5968-5973	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T13179	5752-5757	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T13178	5620-5625	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T13177	5000-5005	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T13176	2707-2712	http://www.uniprot.org/uniprot/O94916	denotes	NFAT5
T13198	3523-3526	http://www.uniprot.org/uniprot/P04578	denotes	env
T13197	3474-3477	http://www.uniprot.org/uniprot/P04578	denotes	env
T13196	3433-3436	http://www.uniprot.org/uniprot/P04578	denotes	env
T13195	3397-3400	http://www.uniprot.org/uniprot/P04578	denotes	env
T13194	3040-3043	http://www.uniprot.org/uniprot/P04578	denotes	env
T13193	3007-3010	http://www.uniprot.org/uniprot/P04578	denotes	env
T13192	2979-2982	http://www.uniprot.org/uniprot/P04578	denotes	env
T13191	2952-2955	http://www.uniprot.org/uniprot/P04578	denotes	env
T13190	2903-2906	http://www.uniprot.org/uniprot/P04578	denotes	env
T13189	1246-1249	http://www.uniprot.org/uniprot/P04578	denotes	env
T13188	1213-1216	http://www.uniprot.org/uniprot/P04578	denotes	env

GO-BP

Id	Subject	Object	Predicate	Lexical cue
T13094	6008-6023	http://purl.obolibrary.org/obo/GO_0006351	denotes	transcriptional
T13093	5626-5641	http://purl.obolibrary.org/obo/GO_0010467	denotes	gene expression
T13092	5457-5465	http://purl.obolibrary.org/obo/GO_0007349	denotes	cellular
T13091	5416-5425	http://purl.obolibrary.org/obo/GO_0009058	denotes	synthesis
T13090	5406-5425	http://purl.obolibrary.org/obo/GO_0042033	denotes	chemokine synthesis
T13089	6036-6046	http://purl.obolibrary.org/obo/GO_0065007	denotes	regulation
T13088	197-207	http://purl.obolibrary.org/obo/GO_0065007	denotes	regulation
T13087	186-207	http://purl.obolibrary.org/obo/GO_0051098	denotes	binding on regulation

GO-MF

Id	Subject	Object	Predicate	Lexical cue
T25294	1775-1782	http://purl.obolibrary.org/obo/GO_0005488	denotes	binding
T25293	1694-1701	http://purl.obolibrary.org/obo/GO_0005488	denotes	binding
T13101	4958-4971	http://purl.obolibrary.org/obo/GO_0051059	denotes	NF-κB binding
T13100	5974-5981	http://purl.obolibrary.org/obo/GO_0005488	denotes	binding
T13099	5758-5765	http://purl.obolibrary.org/obo/GO_0005488	denotes	binding
T13098	4964-4971	http://purl.obolibrary.org/obo/GO_0005488	denotes	binding
T13097	2713-2720	http://purl.obolibrary.org/obo/GO_0005488	denotes	binding
T13096	186-193	http://purl.obolibrary.org/obo/GO_0005488	denotes	binding
T13095	16-23	http://purl.obolibrary.org/obo/GO_0005488	denotes	binding

GO-CC

Id	Subject	Object	Predicate	Lexical cue
T13108	4842-4847	http://purl.obolibrary.org/obo/GO_0005623	denotes	cells
T13107	4605-4610	http://purl.obolibrary.org/obo/GO_0005623	denotes	cells
T13106	4446-4451	http://purl.obolibrary.org/obo/GO_0005623	denotes	cells
T13105	2854-2859	http://purl.obolibrary.org/obo/GO_0005623	denotes	cells
T13104	814-819	http://purl.obolibrary.org/obo/GO_0005623	denotes	cells
T13103	660-665	http://purl.obolibrary.org/obo/GO_0005623	denotes	cells
T13102	367-372	http://purl.obolibrary.org/obo/GO_0005623	denotes	cells

sentences

Id	Subject	Object	Predicate	Lexical cue
T25858	4172-4370	Sentence	denotes	Presentation of viral p24 levels at day 12 in cultures infected with (C) HIV-1 alone or (D) co-infected with MTb are shown as histograms. (, p<0.05; *, p<0.01, as compared to HIV-1Lai/Bal-env–WT).
T25857	4077-4171	Sentence	denotes	Viral p24 levels in the culture supernatants were measured at days 4, 7 and 12 post-infection.
T25856	3761-4076	Sentence	denotes	MDM from four normal donors were infected with 1000 TCID50 of HIV-1Lai/Bal-env–WT or the mutants HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, or HIV-1Lai/Bal-env-N5-Mut, and were either (A) left infected with virus alone or (B) co-infected with MTb CDC1551 (1∶1 MDM∶bacilli).
T25855	3668-3760	Sentence	denotes	Disruption of NF-κB or NFAT5 sites in the LTR inhibits MTb-induced HIV-1 replication in MDM.
T12315	5866-6076	Sentence	denotes	Taken together, the results from PBMC and MDM co-infection experiments demonstrate that the conserved NFAT5 binding site plays as important a transcriptional role in LTR regulation by MTb as do the NF-κB sites.
T12314	5496-5865	Sentence	denotes	Given that NF-κB is efficiently activated in primary MDM in response to TLR agonists [51] and as we have shown in Figure 2, NFAT5 gene expression is also induced by TLR agonists, MDM are a suitable experimental system to analyze the effect of NF-κB versus NFAT5 binding site mutations on virus replication in isolated MDM in the absence or presence of MTb co-infection.
T12313	5254-5495	Sentence	denotes	This is consistent with previous observations showing that MTb infection of human primary macrophage cultures ex vivo suppresses HIV-1 infection due to chemokine synthesis and the enhanced expression of cellular inhibitory factors [48]–[50].
T12312	5116-5253	Sentence	denotes	We note that overall p24 levels were noticeably lower in the cultures co-infected with MTb compared with those infected with HIV-1 alone.
T12311	4882-5115	Sentence	denotes	Notably, although replication of the mutant virus with the single, proximal NF-κB binding site mutation in the shared NFAT5/NF-κB element (HIV-1Lai/Bal-env-κB I-Mut) was diminished, this was not significant at day 12 (Figures 5B–5D).
T12310	4672-4881	Sentence	denotes	Moreover, p24 levels were significantly lower at day 12 in cultures infected with HIV-1Lai/Bal-env-κB II-Mut and HIV-1Lai/Bal-env-κB I+II-Mut as compared to infection of cells with wild-type virus (Figure 5D).
T12309	4553-4671	Sentence	denotes	However, p24 levels were significantly inhibited in cells infected with HIV-1Lai/Bal-env -N5-Mut (p<0.01) (Figure 5D).
T12308	4371-4552	Sentence	denotes	When the cultures were co-infected with MTb, p24 levels increased when the cells were infected with either the wild-type or, to lower levels, with the κB-I mutant virus (Figure 5B).
T12307	3271-3623	Sentence	denotes	As shown in Figures 5A and 5C, in the absence of MTb co-infection, replication of mutant viral molecular clones (HIV-1Lai/Bal-env-κB I-Mut (p<0.05), HIV-1Lai/Bal-env-κB II-Mut (p<0.01), and HIV-1Lai/Bal-env-κB I+II-Mut (p<0.01) as well as HIV-1Lai/Bal-env-N5-Mut (p<0.01) were significantly reduced in comparison to the wild-type virus (Figures 5A–5C).
T12306	3165-3270	Sentence	denotes	Supernatants were collected at days 4, 7, and 12 post-HIV-1 infection and virus replication was measured.
T12305	2648-3164	Sentence	denotes	To specifically examine the functional impact of NF-κB and NFAT5 binding site usage in MDM, which are efficiently infected by both pathogens, we next isolated MDM from four normal donors and infected these cells with 1000 TCID50 of wild-type HIV-1Lai/Bal-env or with the mutant viral clones HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, or HIV-1Lai/Bal-env-N5-Mut. After overnight incubation, cell cultures were co-infected with MTb (CDC1551) or left infected with virus alone.
T12304	1386-1600	Sentence	denotes	However, the replication of each mutant virus was impaired to a more significant extent in the context of MTb co-infection, consistent with important roles for both NF-κB and NFAT5 in MTb-induced HIV-1 replication.
T12303	1306-1385	Sentence	denotes	None of the mutations completely abolished viral induction by MTb co-infection.
T12302	1027-1305	Sentence	denotes	In the absence of MTb co-infection, p24 levels were also significantly lower in the PBMC cultures infected with HIV-1Lai/Bal-env–κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut and HIV-1Lai/Bal-env-N5-Mut, but not HIV-1Lai/Bal-env-κB I-Mut, in comparison to wild-type virus (Figure 4C).
T12301	710-1026	Sentence	denotes	As depicted in the histograms displayed in Figure 4C, at day 12 post-HIV-1 infection in MTb-co-infected cells there was a significant reduction in levels of HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, and HIV-1Lai/Bal-env -N5-Mut in comparison to wild-type virus (Figure 4C).
T12300	553-709	Sentence	denotes	Replication of each mutant virus was reduced in comparison to wild-type virus in mock- and MTb-co-infected cells at all timepoints examined (Figures 4A–4B).
T12299	340-552	Sentence	denotes	After overnight infection, cells were co-infected with MTb (CDC1551) or mock-infected and free virus levels were detected by measuring p24 levels in culture supernatants at days 4, 7, and 12 post-HIV-1 infection.
T12298	105-339	Sentence	denotes	We next examined the functional impact of specifically disrupting NF-κB or NFAT5 binding on regulation of HIV-1 replication by infecting bulk PBMC from four normal donors with the wild-type or mutant HIV-1Lai/Bal-env molecular clones.
T12297	0-104	Sentence	denotes	NF-κB and NFAT5 binding play independent activating roles in MTb-mediated induction of HIV-1 replication
T25275	2421-2647	Sentence	denotes	Replication of the mutant viruses was compared to wild-type virus replication under the same experimental conditions (without and with MTb co-infection, respectively). , p<0.05; *, p<0.01, as compared to HIV-1Lai/Bal-Env-WT.
T25274	2201-2420	Sentence	denotes	Viral p24 levels in culture supernatants were measured at days 4, 7 and 12 post-infection. (C) Histograms show viral p24 levels at day 12 in the MTb uninfected (grey bars) and MTb co-infected (black bars) PBMC cultures.
T25273	1896-2200	Sentence	denotes	PBMC from four normal donors were infected with 1000 TCID50 HIV-1Lai/Bal-env-WT or the mutants HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, or HIV-1Lai/Bal-env-N5-Mut and either; (A) left untreated, or (B) co-infected with MTb isolate CDC1551 (10∶1 cells∶bacilli).
T25272	1733-1895	Sentence	denotes	Specific disruption of the NF-κB or NFAT5 binding sites in the HIV-1 subtype B LTR inhibits R5-tropic virus replication in human PBMC after co-infection with MTb.
T25271	1645-1732	Sentence	denotes	MTb-induced HIV-1 replication in PBMC depends on binding of NFAT5 and NF-κB to the LTR.
T189	0-104	Sentence	denotes	NF-κB and NFAT5 binding play independent activating roles in MTb-mediated induction of HIV-1 replication
T190	105-339	Sentence	denotes	We next examined the functional impact of specifically disrupting NF-κB or NFAT5 binding on regulation of HIV-1 replication by infecting bulk PBMC from four normal donors with the wild-type or mutant HIV-1Lai/Bal-env molecular clones.
T191	340-552	Sentence	denotes	After overnight infection, cells were co-infected with MTb (CDC1551) or mock-infected and free virus levels were detected by measuring p24 levels in culture supernatants at days 4, 7, and 12 post-HIV-1 infection.
T192	553-709	Sentence	denotes	Replication of each mutant virus was reduced in comparison to wild-type virus in mock- and MTb-co-infected cells at all timepoints examined (Figures 4A–4B).
T193	710-1026	Sentence	denotes	As depicted in the histograms displayed in Figure 4C, at day 12 post-HIV-1 infection in MTb-co-infected cells there was a significant reduction in levels of HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, and HIV-1Lai/Bal-env -N5-Mut in comparison to wild-type virus (Figure 4C).
T194	1027-1305	Sentence	denotes	In the absence of MTb co-infection, p24 levels were also significantly lower in the PBMC cultures infected with HIV-1Lai/Bal-env–κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut and HIV-1Lai/Bal-env-N5-Mut, but not HIV-1Lai/Bal-env-κB I-Mut, in comparison to wild-type virus (Figure 4C).
T195	1306-1385	Sentence	denotes	None of the mutations completely abolished viral induction by MTb co-infection.
T196	1386-1600	Sentence	denotes	However, the replication of each mutant virus was impaired to a more significant extent in the context of MTb co-infection, consistent with important roles for both NF-κB and NFAT5 in MTb-induced HIV-1 replication.
T197	1601-1732	Sentence	denotes	10.1371/journal.ppat.1002620.g004 Figure 4 MTb-induced HIV-1 replication in PBMC depends on binding of NFAT5 and NF-κB to the LTR.
T198	1733-1895	Sentence	denotes	Specific disruption of the NF-κB or NFAT5 binding sites in the HIV-1 subtype B LTR inhibits R5-tropic virus replication in human PBMC after co-infection with MTb.
T199	1896-2200	Sentence	denotes	PBMC from four normal donors were infected with 1000 TCID50 HIV-1Lai/Bal-env-WT or the mutants HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, or HIV-1Lai/Bal-env-N5-Mut and either; (A) left untreated, or (B) co-infected with MTb isolate CDC1551 (10∶1 cells∶bacilli).
T200	2201-2420	Sentence	denotes	Viral p24 levels in culture supernatants were measured at days 4, 7 and 12 post-infection. (C) Histograms show viral p24 levels at day 12 in the MTb uninfected (grey bars) and MTb co-infected (black bars) PBMC cultures.
T201	2421-2647	Sentence	denotes	Replication of the mutant viruses was compared to wild-type virus replication under the same experimental conditions (without and with MTb co-infection, respectively). , p<0.05; *, p<0.01, as compared to HIV-1Lai/Bal-Env-WT.
T202	2648-3051	Sentence	denotes	To specifically examine the functional impact of NF-κB and NFAT5 binding site usage in MDM, which are efficiently infected by both pathogens, we next isolated MDM from four normal donors and infected these cells with 1000 TCID50 of wild-type HIV-1Lai/Bal-env or with the mutant viral clones HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, or HIV-1Lai/Bal-env-N5-Mut.
T203	3052-3164	Sentence	denotes	After overnight incubation, cell cultures were co-infected with MTb (CDC1551) or left infected with virus alone.
T204	3165-3270	Sentence	denotes	Supernatants were collected at days 4, 7, and 12 post-HIV-1 infection and virus replication was measured.
T205	3271-3623	Sentence	denotes	As shown in Figures 5A and 5C, in the absence of MTb co-infection, replication of mutant viral molecular clones (HIV-1Lai/Bal-env-κB I-Mut (p<0.05), HIV-1Lai/Bal-env-κB II-Mut (p<0.01), and HIV-1Lai/Bal-env-κB I+II-Mut (p<0.01) as well as HIV-1Lai/Bal-env-N5-Mut (p<0.01) were significantly reduced in comparison to the wild-type virus (Figures 5A–5C).
T206	3624-3760	Sentence	denotes	10.1371/journal.ppat.1002620.g005 Figure 5 Disruption of NF-κB or NFAT5 sites in the LTR inhibits MTb-induced HIV-1 replication in MDM.
T207	3761-4076	Sentence	denotes	MDM from four normal donors were infected with 1000 TCID50 of HIV-1Lai/Bal-env–WT or the mutants HIV-1Lai/Bal-env-κB I-Mut, HIV-1Lai/Bal-env-κB II-Mut, HIV-1Lai/Bal-env-κB I+II-Mut, or HIV-1Lai/Bal-env-N5-Mut, and were either (A) left infected with virus alone or (B) co-infected with MTb CDC1551 (1∶1 MDM∶bacilli).
T208	4077-4171	Sentence	denotes	Viral p24 levels in the culture supernatants were measured at days 4, 7 and 12 post-infection.
T209	4172-4370	Sentence	denotes	Presentation of viral p24 levels at day 12 in cultures infected with (C) HIV-1 alone or (D) co-infected with MTb are shown as histograms. (, p<0.05; *, p<0.01, as compared to HIV-1Lai/Bal-env–WT).
T210	4371-4552	Sentence	denotes	When the cultures were co-infected with MTb, p24 levels increased when the cells were infected with either the wild-type or, to lower levels, with the κB-I mutant virus (Figure 5B).
T211	4553-4671	Sentence	denotes	However, p24 levels were significantly inhibited in cells infected with HIV-1Lai/Bal-env -N5-Mut (p<0.01) (Figure 5D).
T212	4672-4881	Sentence	denotes	Moreover, p24 levels were significantly lower at day 12 in cultures infected with HIV-1Lai/Bal-env-κB II-Mut and HIV-1Lai/Bal-env-κB I+II-Mut as compared to infection of cells with wild-type virus (Figure 5D).
T213	4882-5115	Sentence	denotes	Notably, although replication of the mutant virus with the single, proximal NF-κB binding site mutation in the shared NFAT5/NF-κB element (HIV-1Lai/Bal-env-κB I-Mut) was diminished, this was not significant at day 12 (Figures 5B–5D).
T214	5116-5253	Sentence	denotes	We note that overall p24 levels were noticeably lower in the cultures co-infected with MTb compared with those infected with HIV-1 alone.
T215	5254-5495	Sentence	denotes	This is consistent with previous observations showing that MTb infection of human primary macrophage cultures ex vivo suppresses HIV-1 infection due to chemokine synthesis and the enhanced expression of cellular inhibitory factors [48]–[50].
T216	5496-5865	Sentence	denotes	Given that NF-κB is efficiently activated in primary MDM in response to TLR agonists [51] and as we have shown in Figure 2, NFAT5 gene expression is also induced by TLR agonists, MDM are a suitable experimental system to analyze the effect of NF-κB versus NFAT5 binding site mutations on virus replication in isolated MDM in the absence or presence of MTb co-infection.
T217	5866-6076	Sentence	denotes	Taken together, the results from PBMC and MDM co-infection experiments demonstrate that the conserved NFAT5 binding site plays as important a transcriptional role in LTR regulation by MTb as do the NF-κB sites.

simple1

Id	Subject	Object	Predicate	Lexical cue
T25890	4362-4365	Protein	denotes	env
T25889	4194-4197	Protein	denotes	p24
T25888	4083-4086	Protein	denotes	p24
T25887	3959-3962	Protein	denotes	env
T25886	3926-3929	Protein	denotes	env
T25885	3898-3901	Protein	denotes	env
T25884	3871-3874	Protein	denotes	env
T25883	3836-3839	Protein	denotes	env
T25310	2318-2321	Protein	denotes	p24
T25309	2207-2210	Protein	denotes	p24
T25308	2092-2095	Protein	denotes	env
T25307	2059-2062	Protein	denotes	env
T25306	2031-2034	Protein	denotes	env
T25305	2004-2007	Protein	denotes	env
T25304	1969-1972	Protein	denotes	env
T25303	1705-1710	Protein	denotes	NFAT5
T13149	5620-5625	Protein	denotes	NFAT5
T13148	5137-5140	Protein	denotes	p24
T13147	5034-5037	Protein	denotes	env
T13146	4798-4801	Protein	denotes	env
T13145	4767-4770	Protein	denotes	env
T13144	4682-4685	Protein	denotes	p24
T13143	4638-4641	Protein	denotes	env
T13142	4562-4565	Protein	denotes	p24
T13141	4416-4419	Protein	denotes	p24
T13140	3523-3526	Protein	denotes	env
T13139	3474-3477	Protein	denotes	env
T13138	3433-3436	Protein	denotes	env
T13137	3397-3400	Protein	denotes	env
T13136	3040-3043	Protein	denotes	env
T13135	3007-3010	Protein	denotes	env
T13134	2979-2982	Protein	denotes	env
T13133	2952-2955	Protein	denotes	env
T13132	2903-2906	Protein	denotes	env
T13131	1561-1566	Protein	denotes	NFAT5
T13130	1246-1249	Protein	denotes	env
T13129	1213-1216	Protein	denotes	env
T13128	1180-1183	Protein	denotes	env
T13127	1152-1155	Protein	denotes	env
T13126	1063-1066	Protein	denotes	p24
T13125	969-972	Protein	denotes	env
T13124	935-938	Protein	denotes	env
T13123	907-910	Protein	denotes	env
T13122	880-883	Protein	denotes	env
T13121	475-478	Protein	denotes	p24
T13120	318-321	Protein	denotes	env
T13119	180-185	Protein	denotes	NFAT5
T13118	10-15	Protein	denotes	NFAT5

BioNLP16_DUT

Id	Subject	Object	Predicate	Lexical cue
T26262	4362-4365	Protein	denotes	env
T26261	4194-4197	Protein	denotes	p24
T26260	4083-4086	Protein	denotes	p24
T25790	1694-1701	Binding	denotes	binding
T25789	2318-2321	Protein	denotes	p24
T25788	2207-2210	Protein	denotes	p24
T25787	2092-2095	Protein	denotes	env
T25786	2059-2062	Protein	denotes	env
T25785	2031-2034	Protein	denotes	env
T25784	2004-2007	Protein	denotes	env
T25783	1969-1972	Protein	denotes	env
T25782	1705-1710	Protein	denotes	NFAT5
T26259	3959-3962	Protein	denotes	env
T26258	3926-3929	Protein	denotes	env
T26257	3898-3901	Protein	denotes	env
T26256	3871-3874	Protein	denotes	env
T26255	3836-3839	Protein	denotes	env
T13571	5631-5641	Gene_expression	denotes	expression
T13570	5650-5657	Positive_regulation	denotes	induced
T13569	4592-4601	Negative_regulation	denotes	inhibited
T13568	4427-4436	Positive_regulation	denotes	increased
T13567	844-853	Negative_regulation	denotes	reduction
T13566	186-193	Binding	denotes	binding
T13565	16-23	Binding	denotes	binding
T13564	5620-5625	Protein	denotes	NFAT5
T13563	5137-5140	Protein	denotes	p24
T13562	5034-5037	Protein	denotes	env
T13561	4798-4801	Protein	denotes	env
T13560	4767-4770	Protein	denotes	env
T13559	4682-4685	Protein	denotes	p24
T13558	4638-4641	Protein	denotes	env
T13557	4562-4565	Protein	denotes	p24
T13556	4416-4419	Protein	denotes	p24
T13555	3523-3526	Protein	denotes	env
T13554	3474-3477	Protein	denotes	env
T13553	3433-3436	Protein	denotes	env
T13552	3397-3400	Protein	denotes	env
T13551	3040-3043	Protein	denotes	env
T13550	3007-3010	Protein	denotes	env
T13549	2979-2982	Protein	denotes	env
T13548	2952-2955	Protein	denotes	env
T13547	2903-2906	Protein	denotes	env
T13546	1561-1566	Protein	denotes	NFAT5
T13545	1063-1066	Protein	denotes	p24
T13544	1246-1249	Protein	denotes	env
T13543	1213-1216	Protein	denotes	env
T13542	1180-1183	Protein	denotes	env
T13541	1152-1155	Protein	denotes	env
T13540	969-972	Protein	denotes	env
T13539	935-938	Protein	denotes	env
T13538	907-910	Protein	denotes	env
T13537	880-883	Protein	denotes	env
T13536	475-478	Protein	denotes	p24
T13535	318-321	Protein	denotes	env
T13534	180-185	Protein	denotes	NFAT5
T13533	10-15	Protein	denotes	NFAT5
R10123	T13533	T13565	themeOf	NFAT5,binding
R10124	T13534	T13566	themeOf	NFAT5,binding
R10125	T13540	T13567	themeOf	env,reduction
R10126	T13556	T13568	themeOf	p24,increased
R10127	T13557	T13569	themeOf	p24,inhibited
R10128	T13564	T13571	themeOf	NFAT5,expression
R10129	T13571	T13570	themeOf	expression,induced
R18837	T25782	T25790	themeOf	NFAT5,binding

BioNLP16_Messiy

Id	Subject	Object	Predicate	Lexical cue
T13290	3474-3477	Protein	denotes	env
T13289	3433-3436	Protein	denotes	env
T13288	3397-3400	Protein	denotes	env
T13287	3040-3043	Protein	denotes	env
T13286	3007-3010	Protein	denotes	env
T13285	2979-2982	Protein	denotes	env
T13284	2952-2955	Protein	denotes	env
T13283	2903-2906	Protein	denotes	env
T13282	1561-1566	Protein	denotes	NFAT5
T13281	1063-1066	Protein	denotes	p24
T13280	1246-1249	Protein	denotes	env
T13279	1213-1216	Protein	denotes	env
T13278	1180-1183	Protein	denotes	env
T13277	1152-1155	Protein	denotes	env
T13276	969-972	Protein	denotes	env
T13275	935-938	Protein	denotes	env
T13274	907-910	Protein	denotes	env
T13273	880-883	Protein	denotes	env
T13272	475-478	Protein	denotes	p24
T13271	318-321	Protein	denotes	env
T13270	180-185	Protein	denotes	NFAT5
T13269	10-15	Protein	denotes	NFAT5
T13310	5631-5641	Gene_expression	denotes	expression
T13309	5650-5657	Positive_regulation	denotes	induced
T13308	5164-5169	Positive_regulation	denotes	lower
T13307	4712-4717	Positive_regulation	denotes	lower
T13306	4592-4601	Negative_regulation	denotes	inhibited
T13305	4427-4436	Positive_regulation	denotes	increased
T13304	844-853	Negative_regulation	denotes	reduction
T13303	160-170	Negative_regulation	denotes	disrupting
T13302	186-193	Binding	denotes	binding
T13301	16-23	Binding	denotes	binding
T13300	5620-5625	Protein	denotes	NFAT5
T13299	5137-5140	Protein	denotes	p24
T13298	5034-5037	Protein	denotes	env
T13297	4798-4801	Protein	denotes	env
T13296	4767-4770	Protein	denotes	env
T13295	4682-4685	Protein	denotes	p24
T13294	4638-4641	Protein	denotes	env
T13293	4562-4565	Protein	denotes	p24
T13292	4416-4419	Protein	denotes	p24
T13291	3523-3526	Protein	denotes	env
T26057	4362-4365	Protein	denotes	env
T26056	4194-4197	Protein	denotes	p24
T26055	4083-4086	Protein	denotes	p24
T26054	3959-3962	Protein	denotes	env
T26053	3926-3929	Protein	denotes	env
T26052	3898-3901	Protein	denotes	env
T26051	3871-3874	Protein	denotes	env
T26050	3836-3839	Protein	denotes	env
T25518	1683-1690	Positive_regulation	denotes	depends
T25517	1694-1701	Binding	denotes	binding
T25516	2318-2321	Protein	denotes	p24
T25515	2207-2210	Protein	denotes	p24
T25514	2092-2095	Protein	denotes	env
T25513	2059-2062	Protein	denotes	env
T25512	2031-2034	Protein	denotes	env
T25511	2004-2007	Protein	denotes	env
T25510	1969-1972	Protein	denotes	env
T25509	1705-1710	Protein	denotes	NFAT5
R10083	T13269	T13301	themeOf	NFAT5,binding
R10084	T13270	T13302	themeOf	NFAT5,binding
R10085	T13276	T13304	themeOf	env,reduction
R10086	T13292	T13305	themeOf	p24,increased
R10087	T13293	T13306	themeOf	p24,inhibited
R10088	T13295	T13307	themeOf	p24,lower
R10089	T13299	T13308	themeOf	p24,lower
R10090	T13300	T13310	themeOf	NFAT5,expression
R10091	T13302	T13303	themeOf	binding,disrupting
R10092	T13310	T13309	themeOf	expression,induced
R18626	T25509	T25517	themeOf	NFAT5,binding
R18627	T25517	T25518	themeOf	binding,depends

DLUT931

Id	Subject	Object	Predicate	Lexical cue
T26049	4362-4365	Protein	denotes	env
T26048	4194-4197	Protein	denotes	p24
T26047	4083-4086	Protein	denotes	p24
T26046	3959-3962	Protein	denotes	env
T26045	3926-3929	Protein	denotes	env
T26044	3898-3901	Protein	denotes	env
T26043	3871-3874	Protein	denotes	env
T26042	3836-3839	Protein	denotes	env
T25508	1683-1690	Positive_regulation	denotes	depends
T25507	1694-1701	Binding	denotes	binding
T25506	2318-2321	Protein	denotes	p24
T25505	2207-2210	Protein	denotes	p24
T25504	2092-2095	Protein	denotes	env
T25503	2059-2062	Protein	denotes	env
T25502	2031-2034	Protein	denotes	env
T25501	2004-2007	Protein	denotes	env
T25500	1969-1972	Protein	denotes	env
T25499	1705-1710	Protein	denotes	NFAT5
T13268	5650-5657	Positive_regulation	denotes	induced
T13267	5631-5641	Gene_expression	denotes	expression
T13266	5164-5169	Positive_regulation	denotes	lower
T13265	4712-4717	Positive_regulation	denotes	lower
T13264	4592-4601	Negative_regulation	denotes	inhibited
T13263	4427-4436	Positive_regulation	denotes	increased
T13262	160-170	Negative_regulation	denotes	disrupting
T13261	197-207	Regulation	denotes	regulation
T13260	186-193	Binding	denotes	binding
T13259	16-23	Binding	denotes	binding
T13258	5620-5625	Protein	denotes	NFAT5
T13257	5137-5140	Protein	denotes	p24
T13256	5034-5037	Protein	denotes	env
T13255	4798-4801	Protein	denotes	env
T13254	4767-4770	Protein	denotes	env
T13253	4682-4685	Protein	denotes	p24
T13252	4638-4641	Protein	denotes	env
T13251	4562-4565	Protein	denotes	p24
T13250	4416-4419	Protein	denotes	p24
T13249	3523-3526	Protein	denotes	env
T13248	3474-3477	Protein	denotes	env
T13247	3433-3436	Protein	denotes	env
T13246	3397-3400	Protein	denotes	env
T13245	3040-3043	Protein	denotes	env
T13244	3007-3010	Protein	denotes	env
T13243	2979-2982	Protein	denotes	env
T13242	2952-2955	Protein	denotes	env
T13241	2903-2906	Protein	denotes	env
T13240	1561-1566	Protein	denotes	NFAT5
T13239	1063-1066	Protein	denotes	p24
T13238	1246-1249	Protein	denotes	env
T13237	1213-1216	Protein	denotes	env
T13236	1180-1183	Protein	denotes	env
T13235	1152-1155	Protein	denotes	env
T13234	969-972	Protein	denotes	env
T13233	935-938	Protein	denotes	env
T13232	907-910	Protein	denotes	env
T13231	880-883	Protein	denotes	env
T13230	475-478	Protein	denotes	p24
T13229	318-321	Protein	denotes	env
T13228	180-185	Protein	denotes	NFAT5
T13227	10-15	Protein	denotes	NFAT5
R10073	T13227	T13259	themeOf	NFAT5,binding
R10074	T13228	T13260	themeOf	NFAT5,binding
R10075	T13250	T13263	themeOf	p24,increased
R10080	T13260	T13261	themeOf	binding,regulation
R10081	T13260	T13262	themeOf	binding,disrupting
R10076	T13251	T13264	themeOf	p24,inhibited
R10077	T13253	T13265	themeOf	p24,lower
R10078	T13257	T13266	themeOf	p24,lower
R10079	T13258	T13267	themeOf	NFAT5,expression
R10082	T13267	T13268	themeOf	expression,induced
R18624	T25499	T25507	themeOf	NFAT5,binding
R18625	T25507	T25508	themeOf	binding,depends

bionlp-st-ge-2016-test-ihmc

Id	Subject	Object	Predicate	Lexical cue
T26276	3756-3759	Protein	denotes	MDM
T26275	3880-3883	Protein	denotes	Mut
T26274	4281-4284	Protein	denotes	MTb
T26273	4046-4049	Protein	denotes	MTb
T26272	4314-4316	Entity	denotes	p<
T26271	3691-3696	Protein	denotes	NFAT5
T26270	3682-3687	Protein	denotes	NF-κB
T26269	3885-3911	Protein	denotes	HIV-1Lai/Bal-env-κB II-Mut
T26268	4083-4086	Protein	denotes	p24
T26267	3723-3734	Protein	denotes	MTb-induced
T26266	3679-3702	Entity	denotes	of NF-κB or NFAT5 sites
T26265	4097-4121	Entity	denotes	the culture supernatants
T26264	4194-4197	Protein	denotes	p24
T26263	3761-3764	Protein	denotes	MDM
T25814	2556-2573	Regulation	denotes	MTb co-infection,
T25813	2377-2405	Regulation	denotes	MTb co-infected (black bars)
T25812	1753-1788	Binding	denotes	of the NF-κB or NFAT5 binding sites
T25811	1691-1720	Binding	denotes	on binding of NFAT5 and NF-κB
T25810	2207-2210	Protein	denotes	p24
T25809	2159-2162	Protein	denotes	MTb
T25808	1856-1866	Entity	denotes	human PBMC
T25807	2221-2241	Entity	denotes	culture supernatants
T25806	1760-1765	Protein	denotes	NF-κB
T25805	2592-2594	Entity	denotes	p<
T25804	1705-1710	Protein	denotes	NFAT5
T25803	1678-1682	Entity	denotes	PBMC
T25802	2556-2559	Protein	denotes	MTb
T25801	2041-2044	Protein	denotes	Mut
T25800	2406-2410	Entity	denotes	PBMC
T25799	1753-1788	Entity	denotes	of the NF-κB or NFAT5 binding sites
T25798	1891-1894	Protein	denotes	MTb
T25797	2377-2405	Protein	denotes	MTb co-infected (black bars)
T25796	2342-2372	Protein	denotes	the MTb uninfected (grey bars)
T25795	1715-1720	Protein	denotes	NF-κB
T25794	1896-1924	Entity	denotes	PBMC from four normal donors
T25793	1645-1656	Protein	denotes	MTb-induced
T25792	2318-2321	Protein	denotes	p24
T25791	1769-1774	Protein	denotes	NFAT5
T13658	5507-5585	Positive_regulation	denotes	NF-κB is efficiently activated in primary MDM in response to TLR agonists [51]
T13657	1042-1061	Regulation	denotes	of MTb co-infection
T13656	5908-5924	Regulation	denotes	MDM co-infection
T13655	3317-3336	Regulation	denotes	of MTb co-infection
T13654	5752-5801	Binding	denotes	NFAT5 binding site mutations on virus replication
T13653	5620-5641	Gene_expression	denotes	NFAT5 gene expression
T13652	1489-1599	Regulation	denotes	of MTb co-infection, consistent with important roles for both NF-κB and NFAT5 in MTb-induced HIV-1 replication
T13651	5845-5864	Regulation	denotes	of MTb co-infection
T13650	5954-5986	Binding	denotes	the conserved NFAT5 binding site
T13649	5430-5453	Positive_regulation	denotes	the enhanced expression
T13648	1365-1384	Regulation	denotes	by MTb co-infection
T13647	5954-5986	Binding	denotes	the conserved NFAT5 binding site
T13646	5848-5851	Protein	denotes	MTb
T13645	5752-5801	Entity	denotes	NFAT5 binding site mutations on virus replication
T13644	6060-6075	Entity	denotes	the NF-κB sites
T13643	3116-3129	Protein	denotes	MTb (CDC1551)
T13642	5043-5046	Protein	denotes	Mut
T13641	4411-4415	Protein	denotes	MTb,
T13640	5203-5206	Protein	denotes	MTb
T13639	4682-4685	Protein	denotes	p24
T13638	5344-5354	Entity	denotes	macrophage
T13637	3448-3449	Entity	denotes	p
T13636	2694-2702	Protein	denotes	of NF-κB
T13635	180-185	Protein	denotes	NFAT5
T13634	3411-3412	Entity	denotes	p
T13633	247-275	Entity	denotes	PBMC from four normal donors
T13632	5954-5986	Entity	denotes	the conserved NFAT5 binding site
T13631	1162-1165	Protein	denotes	Mut
T13630	4651-4652	Entity	denotes	p
T13629	4839-4880	Entity	denotes	of cells with wild-type virus (Figure 5D)
T13628	5000-5011	Protein	denotes	NFAT5/NF-κB
T13627	5000-5011	Protein	denotes	NFAT5/NF-κB
T13626	10-15	Protein	denotes	NFAT5
T13625	1561-1566	Protein	denotes	NFAT5
T13624	1570-1581	Protein	denotes	MTb-induced
T13623	5908-5911	Protein	denotes	MDM
T13622	5137-5140	Protein	denotes	p24
T13621	2961-2964	Protein	denotes	Mut
T13620	4605-4619	Entity	denotes	cells infected
T13619	2989-2992	Protein	denotes	Mut
T13618	3165-3177	Entity	denotes	Supernatants
T13617	475-478	Protein	denotes	p24
T13616	1492-1495	Protein	denotes	MTb
T13615	2707-2712	Protein	denotes	NFAT5
T13614	0-5	Protein	denotes	NF-κB
T13613	2721-2725	Entity	denotes	site
T13612	1045-1048	Protein	denotes	MTb
T13611	4523-4526	Protein	denotes	B-I
T13610	497-530	Entity	denotes	supernatants at days 4, 7, and 12
T13609	367-372	Entity	denotes	cells
T13608	4416-4419	Protein	denotes	p24
T13607	5541-5552	Protein	denotes	primary MDM
T13606	61-73	Protein	denotes	MTb-mediated
T13605	2807-2810	Protein	denotes	MDM
T13604	3535-3536	Entity	denotes	p
T13603	4642-4649	Protein	denotes	-N5-Mut
T13602	4646-4649	Protein	denotes	Mut
T13601	5313-5316	Protein	denotes	MTb
T13600	5620-5625	Protein	denotes	NFAT5
T13599	5006-5011	Protein	denotes	NF-κB
T13598	395-408	Protein	denotes	MTb (CDC1551)
T13597	2848-2859	Entity	denotes	these cells
T13596	1551-1556	Protein	denotes	NF-κB
T13595	5568-5585	Entity	denotes	TLR agonists [51]
T13594	5968-5973	Protein	denotes	NFAT5
T13593	5658-5673	Entity	denotes	by TLR agonists
T13592	5675-5678	Protein	denotes	MDM
T13591	6064-6069	Protein	denotes	NF-κB
T13590	4562-4565	Protein	denotes	p24
T13589	5814-5817	Protein	denotes	MDM
T13588	660-708	Entity	denotes	cells at all timepoints examined (Figures 4A–4B)
T13587	5752-5757	Protein	denotes	NFAT5
T13586	4642-4649	Protein	denotes	-N5-Mut
T13585	2735-2739	Protein	denotes	MDM,
T13584	3320-3323	Protein	denotes	MTb
T13583	5507-5512	Protein	denotes	NF-κB
T13582	6047-6053	Protein	denotes	by MTb
T13581	1063-1066	Protein	denotes	p24
T13580	4972-4976	Entity	denotes	site
T13579	5899-5903	Entity	denotes	PBMC
T13578	1368-1371	Protein	denotes	MTb
T13577	644-659	Protein	denotes	MTb-co-infected
T13576	3491-3492	Entity	denotes	p
T13575	1107-1115	Entity	denotes	the PBMC
T13574	4442-4451	Entity	denotes	the cells
T13573	171-176	Protein	denotes	NF-κB
T13572	5736-5744	Protein	denotes	of NF-κB
R10130	T13578	T13648	themeOf	MTb,by MTb co-infection
R10131	T13583	T13658	themeOf	NF-κB,NF-κB is efficiently activated in primary MDM in response to TLR agonists [51]
R10132	T13584	T13655	themeOf	MTb,of MTb co-infection
R10133	T13594	T13650	themeOf	NFAT5,the conserved NFAT5 binding site
R10134	T13600	T13653	themeOf	NFAT5,NFAT5 gene expression
R10135	T13612	T13657	themeOf	MTb,of MTb co-infection
R10136	T13616	T13652	themeOf	MTb,"of MTb co-infection, consistent with important roles for both NF-κB and NFAT5 in MTb-induced HIV-1 replication"
R10137	T13623	T13656	themeOf	MDM,MDM co-infection
R10138	T13632	T13647	themeOf	the conserved NFAT5 binding site,the conserved NFAT5 binding site
R10139	T13646	T13651	themeOf	MTb,of MTb co-infection
R18838	T25795	T25811	themeOf	NF-κB,on binding of NFAT5 and NF-κB
R18839	T25797	T25813	themeOf	MTb co-infected (black bars),MTb co-infected (black bars)
R18840	T25799	T25812	themeOf	of the NF-κB or NFAT5 binding sites,of the NF-κB or NFAT5 binding sites
R18841	T25802	T25814	themeOf	MTb,"MTb co-infection,"
R18842	T25804	T25811	themeOf	NFAT5,on binding of NFAT5 and NF-κB

bionlp-st-ge-2016-spacy-parsed

Id	Subject	Object	Predicate	Lexical cue
T26139	3878-3883	NNP	denotes	I-Mut
T26138	3867-3877	NNP	denotes	Bal-env-κB
T26137	3866-3867	NN	denotes	/
T26136	3858-3866	JJ	denotes	HIV-1Lai
T26135	3850-3857	NNS	denotes	mutants
T26134	3846-3849	DT	denotes	the
T26133	3843-3845	CC	denotes	or
T26132	3840-3842	NNP	denotes	WT
T26131	3832-3839	NN	denotes	Bal-env
T26130	3831-3832	NN	denotes	/
T26129	3823-3831	JJ	denotes	HIV-1Lai
T26128	3820-3822	IN	denotes	of
T26127	3813-3819	CD	denotes	TCID50
T26126	3808-3812	CD	denotes	1000
T26125	3803-3807	IN	denotes	with
T26124	3794-3802	VBN	denotes	infected
T26123	3789-3793	VBD	denotes	were
T26122	3782-3788	NNS	denotes	donors
T26121	3775-3781	JJ	denotes	normal
T26120	3770-3774	CD	denotes	four
T26119	3765-3769	IN	denotes	from
T26118	3761-3764	NNP	denotes	MDM
T26117	3759-3760	.	denotes	.
T26116	3756-3759	NNP	denotes	MDM
T26115	3753-3755	IN	denotes	in
T26114	3741-3752	NN	denotes	replication
T26113	3735-3740	NN	denotes	HIV-1
T26112	3723-3734	JJ	denotes	MTb-induced
T26111	3714-3722	VBZ	denotes	inhibits
T26110	3710-3713	NNP	denotes	LTR
T26109	3706-3709	DT	denotes	the
T26108	3703-3705	IN	denotes	in
T26107	3697-3702	NNS	denotes	sites
T26106	3691-3696	NNP	denotes	NFAT5
T26105	3688-3690	CC	denotes	or
T26104	3682-3687	NNP	denotes	NF-κB
T26103	3679-3681	IN	denotes	of
T26102	3668-3678	NN	denotes	Disruption
T25781	2646-2647	.	denotes	.
T25780	2636-2646	NNP	denotes	Bal-Env-WT
T25779	2635-2636	NNP	denotes	/
T25778	2627-2635	NNP	denotes	HIV-1Lai
T25777	2624-2626	TO	denotes	to
T25776	2615-2623	VBN	denotes	compared
T25775	2612-2614	IN	denotes	as
T25774	2610-2611	,	denotes	,
T25773	2606-2610	CD	denotes	0.01
T25772	2605-2606	NN	denotes	<
T25771	2604-2605	JJ	denotes	p
T25770	2602-2603	,	denotes	,
T25769	2600-2602	SYM	denotes	**
T25768	2598-2599	:	denotes	;
T25767	2594-2598	CD	denotes	0.05
T25766	2593-2594	RB	denotes	<
T25765	2592-2593	VB	denotes	p
T25764	2590-2591	,	denotes	,
T25763	2589-2590	SYM	denotes	*
T25762	2587-2588	.	denotes	.
T25761	2586-2587	-RRB-	denotes	)
T25760	2574-2586	RB	denotes	respectively
T25759	2572-2573	,	denotes	,
T25758	2560-2572	NN	denotes	co-infection
T25757	2556-2559	NNP	denotes	MTb
T25756	2551-2555	IN	denotes	with
T25755	2547-2550	CC	denotes	and
T25754	2539-2546	IN	denotes	without
T25753	2538-2539	-LRB-	denotes	(
T25752	2527-2537	NNS	denotes	conditions
T25751	2514-2526	JJ	denotes	experimental
T25750	2509-2513	JJ	denotes	same
T25749	2505-2508	DT	denotes	the
T25748	2499-2504	IN	denotes	under
T25747	2487-2498	NN	denotes	replication
T25746	2481-2486	NN	denotes	virus
T25745	2471-2480	JJ	denotes	wild-type
T25744	2468-2470	TO	denotes	to
T25743	2459-2467	VBN	denotes	compared
T25742	2455-2458	VBD	denotes	was
T25741	2447-2454	NNS	denotes	viruses
T25740	2440-2446	JJ	denotes	mutant
T26254	4369-4370	.	denotes	.
T26253	4368-4369	-RRB-	denotes	)
T26252	4366-4368	NNP	denotes	WT
T26251	4358-4365	NN	denotes	Bal-env
T26250	4357-4358	NN	denotes	/
T26249	4349-4357	JJ	denotes	HIV-1Lai
T26248	4346-4348	TO	denotes	to
T26247	4337-4345	VBN	denotes	compared
T26246	4334-4336	IN	denotes	as
T26245	4332-4333	,	denotes	,
T26244	4328-4332	CD	denotes	0.01
T26243	4327-4328	NN	denotes	<
T26242	4326-4327	JJ	denotes	p
T26241	4324-4325	,	denotes	,
T26240	4322-4324	SYM	denotes	**
T26239	4320-4321	:	denotes	;
T26238	4316-4320	CD	denotes	0.05
T26237	4315-4316	RB	denotes	<
T26196	4139-4143	NNS	denotes	days
T26195	4136-4138	IN	denotes	at
T26194	4127-4135	VBN	denotes	measured
T26193	4122-4126	VBD	denotes	were
T26192	4109-4121	NNS	denotes	supernatants
T26191	4101-4108	NN	denotes	culture
T26190	4097-4100	DT	denotes	the
T26189	4094-4096	IN	denotes	in
T26188	4087-4093	NNS	denotes	levels
T26187	4083-4086	NN	denotes	p24
T26186	4077-4082	JJ	denotes	Viral
T26185	4075-4076	.	denotes	.
T26184	4074-4075	-RRB-	denotes	)
T26183	4067-4074	NNS	denotes	bacilli
T26182	4066-4067	NN	denotes	∶
T26181	4063-4066	NNP	denotes	MDM
T26180	4061-4062	CD	denotes	1
T26179	4060-4061	CD	denotes	∶
T26178	4059-4060	CD	denotes	1
T26177	4058-4059	-LRB-	denotes	(
T26176	4050-4057	NNP	denotes	CDC1551
T26175	4046-4049	NNP	denotes	MTb
T26174	4041-4045	IN	denotes	with
T26173	4029-4040	VBN	denotes	co-infected
T26172	4027-4028	-RRB-	denotes	)
T26171	4026-4027	NNP	denotes	B
T26170	4025-4026	-LRB-	denotes	(
T26169	4022-4024	CC	denotes	or
T26168	4016-4021	RB	denotes	alone
T26167	4010-4015	NN	denotes	virus
T26166	4005-4009	IN	denotes	with
T25739	2436-2439	DT	denotes	the
T25738	2433-2435	IN	denotes	of
T25737	2421-2432	NN	denotes	Replication
T25736	2419-2420	.	denotes	.
T25735	2411-2419	NNS	denotes	cultures
T25734	2406-2410	NNP	denotes	PBMC
T25733	2404-2405	-RRB-	denotes	)
T25732	2400-2404	NNS	denotes	bars
T25731	2394-2399	JJ	denotes	black
T25730	2393-2394	-LRB-	denotes	(
T25729	2381-2392	VBD	denotes	co-infected
T25728	2377-2380	NNP	denotes	MTb
T25727	2373-2376	CC	denotes	and
T25726	2371-2372	-RRB-	denotes	)
T25725	2367-2371	NNS	denotes	bars
T25724	2362-2366	JJ	denotes	grey
T25723	2361-2362	-LRB-	denotes	(
T25722	2350-2360	JJ	denotes	uninfected
T25721	2346-2349	NNP	denotes	MTb
T25720	2342-2345	DT	denotes	the
T25719	2339-2341	IN	denotes	in
T25718	2336-2338	CD	denotes	12
T25717	2332-2335	NN	denotes	day
T25716	2329-2331	IN	denotes	at
T25715	2322-2328	NNS	denotes	levels
T25714	2318-2321	JJ	denotes	p24
T25676	2140-2141	-RRB-	denotes	)
T25675	2139-2140	NNP	denotes	B
T25674	2138-2139	-LRB-	denotes	(
T25673	2135-2137	CC	denotes	or
T25672	2133-2134	,	denotes	,
T25671	2124-2133	JJ	denotes	untreated
T25670	2119-2123	VBD	denotes	left
T25669	2117-2118	-RRB-	denotes	)
T25668	2116-2117	NNP	denotes	A
T25667	2115-2116	-LRB-	denotes	(
T25666	2113-2114	:	denotes	;
T25665	2107-2113	RB	denotes	either
T25664	2103-2106	CC	denotes	and
T25663	2088-2102	NN	denotes	Bal-env-N5-Mut
T25662	2087-2088	NN	denotes	/
T25661	2079-2087	JJ	denotes	HIV-1Lai
T25660	2076-2078	CC	denotes	or
T25659	2074-2075	,	denotes	,
T25658	2071-2074	NNP	denotes	Mut
T25657	2070-2071	:	denotes	-
T25656	2066-2070	NNP	denotes	I+II
T25655	2055-2065	NNP	denotes	Bal-env-κB
T25654	2054-2055	NNP	denotes	/
T25653	2046-2054	NNP	denotes	HIV-1Lai
T25652	2044-2045	,	denotes	,
T25651	2038-2044	NNP	denotes	II-Mut
T25650	2027-2037	NNP	denotes	Bal-env-κB
T25649	2026-2027	NNP	denotes	/
T25648	2018-2026	NNP	denotes	HIV-1Lai
T25647	2016-2017	,	denotes	,
T25646	2011-2016	NNP	denotes	I-Mut
T25645	2000-2010	NNP	denotes	Bal-env-κB
T25644	1999-2000	NN	denotes	/
T25643	1991-1999	JJ	denotes	HIV-1Lai
T25642	1983-1990	NNS	denotes	mutants
T25641	1979-1982	DT	denotes	the
T25640	1976-1978	CC	denotes	or
T25639	1965-1975	NN	denotes	Bal-env-WT
T25638	1964-1965	NN	denotes	/
T25637	1956-1964	JJ	denotes	HIV-1Lai
T25636	1949-1955	CD	denotes	TCID50
T25635	1944-1948	CD	denotes	1000
T25634	1939-1943	IN	denotes	with
T25633	1930-1938	VBN	denotes	infected
T25632	1925-1929	VBD	denotes	were
T25631	1918-1924	NNS	denotes	donors
T25630	1911-1917	JJ	denotes	normal
T25629	1906-1910	CD	denotes	four
T25628	1901-1905	IN	denotes	from
T25627	1896-1900	NNP	denotes	PBMC
T25626	1894-1895	.	denotes	.
T25625	1891-1894	NNP	denotes	MTb
T25624	1886-1890	IN	denotes	with
T25623	1873-1885	NN	denotes	co-infection
T25622	1867-1872	IN	denotes	after
T25621	1862-1866	NNP	denotes	PBMC
T25620	1856-1861	JJ	denotes	human
T25619	1853-1855	IN	denotes	in
T25618	1841-1852	NN	denotes	replication
T25617	1835-1840	NN	denotes	virus
T25616	1825-1834	JJ	denotes	R5-tropic
T25615	1816-1824	VBZ	denotes	inhibits
T25614	1812-1815	NNP	denotes	LTR
T25613	1810-1811	NNP	denotes	B
T25612	1802-1809	NN	denotes	subtype
T25611	1796-1801	NNP	denotes	HIV-1
T25610	1792-1795	DT	denotes	the
T25609	1789-1791	IN	denotes	in
T25608	1783-1788	NNS	denotes	sites
T25607	1775-1782	JJ	denotes	binding
T25606	1769-1774	NNP	denotes	NFAT5
T25605	1766-1768	CC	denotes	or
T25604	1760-1765	NNP	denotes	NF-κB
T25603	1756-1759	DT	denotes	the
T25602	1753-1755	IN	denotes	of
T25601	1742-1752	NN	denotes	disruption
T25600	1733-1741	JJ	denotes	Specific
T25599	1731-1732	.	denotes	.
T25598	1728-1731	NNP	denotes	LTR
T25597	1724-1727	DT	denotes	the
T25596	1721-1723	TO	denotes	to
T25595	1715-1720	NNP	denotes	NF-κB
T25594	1711-1714	CC	denotes	and
T25593	1705-1710	NNP	denotes	NFAT5
T25592	1702-1704	IN	denotes	of
T25591	1694-1701	JJ	denotes	binding
T25590	1691-1693	IN	denotes	on
T25589	1683-1690	VBZ	denotes	depends
T25588	1678-1682	NNP	denotes	PBMC
T25587	1675-1677	IN	denotes	in
T25586	1663-1674	NN	denotes	replication
T25585	1657-1662	NN	denotes	HIV-1
T25584	1645-1656	JJ	denotes	MTb-induced
T25713	2312-2317	JJ	denotes	viral
T25712	2307-2311	VBP	denotes	show
T25711	2296-2306	NNPS	denotes	Histograms
T25710	2294-2295	-RRB-	denotes	)
T25709	2293-2294	$	denotes	C
T25708	2292-2293	-LRB-	denotes	(
T25707	2290-2291	.	denotes	.
T25706	2276-2290	NN	denotes	post-infection
T25705	2273-2275	CD	denotes	12
T25704	2269-2272	CC	denotes	and
T25703	2267-2268	CD	denotes	7
T25702	2265-2266	,	denotes	,
T25701	2264-2265	CD	denotes	4
T25700	2259-2263	NNS	denotes	days
T25699	2256-2258	IN	denotes	at
T25698	2247-2255	VBN	denotes	measured
T25697	2242-2246	VBD	denotes	were
T25696	2229-2241	NNS	denotes	supernatants
T25695	2221-2228	NN	denotes	culture
T25694	2218-2220	IN	denotes	in
T25693	2211-2217	NNS	denotes	levels
T25692	2207-2210	NN	denotes	p24
T25691	2201-2206	JJ	denotes	Viral
T25690	2199-2200	.	denotes	.
T25689	2198-2199	-RRB-	denotes	)
T25688	2191-2198	NNS	denotes	bacilli
T25687	2190-2191	VBP	denotes	∶
T25686	2185-2190	NNS	denotes	cells
T25685	2183-2184	CD	denotes	1
T25684	2182-2183	NN	denotes	∶
T25683	2180-2182	CD	denotes	10
T25682	2179-2180	-LRB-	denotes	(
T25681	2171-2178	NNP	denotes	CDC1551
T25680	2163-2170	VB	denotes	isolate
T25679	2159-2162	NNP	denotes	MTb
T25678	2154-2158	IN	denotes	with
T25677	2142-2153	VBN	denotes	co-infected
T26163	3989-3990	-RRB-	denotes	)
T26162	3988-3989	NNP	denotes	A
T26161	3987-3988	-LRB-	denotes	(
T26160	3980-3986	RB	denotes	either
T26159	3975-3979	VBD	denotes	were
T26158	3971-3974	CC	denotes	and
T26157	3969-3970	,	denotes	,
T26156	3955-3969	NN	denotes	Bal-env-N5-Mut
T26155	3954-3955	NN	denotes	/
T26154	3946-3954	JJ	denotes	HIV-1Lai
T26153	3943-3945	CC	denotes	or
T26152	3941-3942	,	denotes	,
T26151	3938-3941	NNP	denotes	Mut
T26150	3937-3938	:	denotes	-
T26149	3933-3937	NNP	denotes	I+II
T26148	3922-3932	NNP	denotes	Bal-env-κB
T26147	3921-3922	NNP	denotes	/
T26146	3913-3921	NNP	denotes	HIV-1Lai
T26145	3911-3912	,	denotes	,
T26144	3905-3911	NNP	denotes	II-Mut
T26143	3894-3904	NNP	denotes	Bal-env-κB
T26142	3893-3894	NNP	denotes	/
T26141	3885-3893	NNP	denotes	HIV-1Lai
T26140	3883-3884	,	denotes	,
T26165	3996-4004	VBN	denotes	infected
T26164	3991-3995	VBD	denotes	left
T26236	4314-4315	VB	denotes	p
T26235	4312-4313	,	denotes	,
T26234	4311-4312	SYM	denotes	*
T26233	4310-4311	-LRB-	denotes	(
T26232	4308-4309	.	denotes	.
T26231	4298-4308	NNS	denotes	histograms
T26230	4295-4297	IN	denotes	as
T26229	4289-4294	VBN	denotes	shown
T26228	4285-4288	VBP	denotes	are
T26227	4281-4284	NNP	denotes	MTb
T26226	4276-4280	IN	denotes	with
T26225	4264-4275	VBN	denotes	co-infected
T26224	4262-4263	-RRB-	denotes	)
T26223	4261-4262	NNP	denotes	D
T26222	4260-4261	-LRB-	denotes	(
T26221	4257-4259	CC	denotes	or
T26220	4251-4256	RB	denotes	alone
T26219	4245-4250	NNP	denotes	HIV-1
T26218	4243-4244	-RRB-	denotes	)
T26217	4242-4243	NNP	denotes	C
T26216	4241-4242	-LRB-	denotes	(
T26215	4236-4240	IN	denotes	with
T26214	4227-4235	VBN	denotes	infected
T26213	4218-4226	NNS	denotes	cultures
T26212	4215-4217	IN	denotes	in
T26211	4212-4214	CD	denotes	12
T26210	4208-4211	NN	denotes	day
T26209	4205-4207	IN	denotes	at
T26208	4198-4204	NNS	denotes	levels
T26207	4194-4197	JJ	denotes	p24
T26206	4188-4193	JJ	denotes	viral
T26205	4185-4187	IN	denotes	of
T26204	4172-4184	NN	denotes	Presentation
T26203	4170-4171	.	denotes	.
T26202	4156-4170	NN	denotes	post-infection
T26201	4153-4155	CD	denotes	12
T26200	4149-4152	CC	denotes	and
T26199	4147-4148	CD	denotes	7
T26198	4145-4146	,	denotes	,
T26197	4144-4145	CD	denotes	4
R18639	T25584	T25586	amod	MTb-induced,replication
R18640	T25585	T25586	compound	HIV-1,replication
R18641	T25586	T25589	nsubj	replication,depends
R18642	T25587	T25586	prep	in,replication
R18643	T25588	T25587	pobj	PBMC,in
R18644	T25589	T25589	ROOT	depends,depends
R18645	T25590	T25589	prep	on,depends
R18646	T25591	T25590	pobj	binding,on
R18647	T25592	T25591	prep	of,binding
R18648	T25593	T25592	pobj	NFAT5,of
R18649	T25594	T25593	cc	and,NFAT5
R18650	T25595	T25593	conj	NF-κB,NFAT5
R18651	T25596	T25591	prep	to,binding
R18652	T25597	T25598	det	the,LTR
R18653	T25598	T25596	pobj	LTR,to
R18654	T25599	T25589	punct	.,depends
R18655	T25600	T25601	amod	Specific,disruption
R18656	T25601	T25615	nsubj	disruption,inhibits
R18657	T25602	T25601	prep	of,disruption
R18658	T25603	T25604	det	the,NF-κB
R18659	T25604	T25608	nmod	NF-κB,sites
R18660	T25605	T25604	cc	or,NF-κB
R18661	T25606	T25604	conj	NFAT5,NF-κB
R18662	T25607	T25608	amod	binding,sites
R18663	T25608	T25602	pobj	sites,of
R18664	T25609	T25608	prep	in,sites
R18665	T25610	T25614	det	the,LTR
R18666	T25611	T25614	compound	HIV-1,LTR
R18667	T25612	T25613	compound	subtype,B
R18668	T25613	T25614	compound	B,LTR
R18669	T25614	T25609	pobj	LTR,in
R18670	T25615	T25615	ROOT	inhibits,inhibits
R18671	T25616	T25618	amod	R5-tropic,replication
R18672	T25617	T25618	compound	virus,replication
R18673	T25618	T25615	dobj	replication,inhibits
R18674	T25619	T25618	prep	in,replication
R18675	T25620	T25621	compound	human,PBMC
R18676	T25621	T25619	pobj	PBMC,in
R18677	T25622	T25615	prep	after,inhibits
R18678	T25623	T25622	pobj	co-infection,after
R18679	T25624	T25623	prep	with,co-infection
R18680	T25625	T25624	pobj	MTb,with
R18681	T25626	T25615	punct	.,inhibits
R18682	T25627	T25633	nsubjpass	PBMC,infected
R18683	T25628	T25627	prep	from,PBMC
R18684	T25629	T25631	nummod	four,donors
R18685	T25630	T25631	amod	normal,donors
R18686	T25631	T25628	pobj	donors,from
R18687	T25632	T25633	auxpass	were,infected
R18688	T25633	T25633	ROOT	infected,infected
R18689	T25634	T25633	prep	with,infected
R18690	T25635	T25639	nummod	1000,Bal-env-WT
R18691	T25636	T25639	nummod	TCID50,Bal-env-WT
R18692	T25637	T25639	amod	HIV-1Lai,Bal-env-WT
R18693	T25638	T25639	compound	/,Bal-env-WT
R18694	T25639	T25634	pobj	Bal-env-WT,with
R18695	T25640	T25639	cc	or,Bal-env-WT
R18696	T25641	T25642	det	the,mutants
R18697	T25642	T25670	nsubj	mutants,left
R18698	T25643	T25644	compound	HIV-1Lai,/
R18699	T25644	T25646	compound	/,I-Mut
R18700	T25645	T25646	compound	Bal-env-κB,I-Mut
R18701	T25646	T25642	appos	I-Mut,mutants
R18702	T25647	T25646	punct	",",I-Mut
R18703	T25648	T25651	compound	HIV-1Lai,II-Mut
R18704	T25649	T25651	compound	/,II-Mut
R18705	T25650	T25651	compound	Bal-env-κB,II-Mut
R18706	T25651	T25646	conj	II-Mut,I-Mut
R18707	T25652	T25651	punct	",",II-Mut
R18708	T25653	T25656	compound	HIV-1Lai,I+II
R18709	T25654	T25656	compound	/,I+II
R18710	T25655	T25656	compound	Bal-env-κB,I+II
R18711	T25656	T25658	compound	I+II,Mut
R18712	T25657	T25658	punct	-,Mut
R18713	T25658	T25651	conj	Mut,II-Mut
R18714	T25659	T25658	punct	",",Mut
R18715	T25660	T25658	cc	or,Mut
R18716	T25661	T25663	compound	HIV-1Lai,Bal-env-N5-Mut
R18717	T25662	T25663	compound	/,Bal-env-N5-Mut
R18718	T25663	T25658	conj	Bal-env-N5-Mut,Mut
R18719	T25664	T25663	cc	and,Bal-env-N5-Mut
R18720	T25665	T25663	conj	either,Bal-env-N5-Mut
R18721	T25666	T25658	punct	;,Mut
R18722	T25667	T25668	punct	(,A
R18723	T25668	T25658	conj	A,Mut
R18724	T25669	T25658	punct	),Mut
R18725	T25670	T25633	advcl	left,infected
R18726	T25671	T25670	oprd	untreated,left
R18727	T25672	T25670	punct	",",left
R18728	T25673	T25670	cc	or,left
R18729	T25674	T25677	punct	(,co-infected
R18730	T25675	T25677	dep	B,co-infected
R18731	T25676	T25677	punct	),co-infected
R18732	T25677	T25670	conj	co-infected,left
R18733	T25678	T25677	prep	with,co-infected
R18734	T25679	T25678	pobj	MTb,with
R18735	T25680	T25670	conj	isolate,left
R18736	T25681	T25680	dobj	CDC1551,isolate
R18737	T25682	T25681	punct	(,CDC1551
R18738	T25683	T25684	nummod	10,∶
R18739	T25684	T25680	npadvmod	∶,isolate
R18740	T25685	T25686	nummod	1,cells
R18741	T25686	T25684	appos	cells,∶
R18742	T25687	T25688	compound	∶,bacilli
R18743	T25688	T25686	appos	bacilli,cells
R18744	T25689	T25686	punct	),cells
R18745	T25690	T25670	punct	.,left
R18746	T25691	T25693	amod	Viral,levels
R18747	T25692	T25693	compound	p24,levels
R18748	T25693	T25698	nsubjpass	levels,measured
R18749	T25694	T25693	prep	in,levels
R18750	T25695	T25694	pobj	culture,in
R18751	T25696	T25698	nsubjpass	supernatants,measured
R18752	T25697	T25698	auxpass	were,measured
R18753	T25698	T25698	ROOT	measured,measured
R18754	T25699	T25698	prep	at,measured
R18755	T25700	T25699	pobj	days,at
R18756	T25701	T25700	nummod	4,days
R18757	T25702	T25700	punct	",",days
R18758	T25703	T25700	conj	7,days
R18759	T25704	T25703	cc	and,7
R18760	T25705	T25706	nummod	12,post-infection
R18761	T25706	T25703	conj	post-infection,7
R18762	T25707	T25698	punct	.,measured
R18763	T25708	T25709	punct	(,C
R18764	T25709	T25709	ROOT	C,C
R18765	T25710	T25709	punct	),C
R18766	T25711	T25712	nsubj	Histograms,show
R18767	T25712	T25712	ROOT	show,show
R18768	T25713	T25715	amod	viral,levels
R18769	T25714	T25715	amod	p24,levels
R18770	T25715	T25712	dobj	levels,show
R18771	T25716	T25712	prep	at,show
R18772	T25717	T25716	pobj	day,at
R18773	T25718	T25717	nummod	12,day
R18774	T25719	T25712	prep	in,show
R18775	T25720	T25722	det	the,uninfected
R18776	T25721	T25722	compound	MTb,uninfected
R18777	T25722	T25719	pobj	uninfected,in
R18778	T25723	T25725	punct	(,bars
R18779	T25724	T25725	amod	grey,bars
R18780	T25725	T25722	appos	bars,uninfected
R18781	T25726	T25725	punct	),bars
R18782	T25727	T25712	cc	and,show
R18783	T25728	T25729	compound	MTb,co-infected
R18784	T25729	T25712	conj	co-infected,show
R18785	T25730	T25732	punct	(,bars
R18786	T25731	T25732	amod	black,bars
R18787	T25732	T25729	appos	bars,co-infected
R18788	T25733	T25729	punct	),co-infected
R18789	T25734	T25735	compound	PBMC,cultures
R18790	T25735	T25735	ROOT	cultures,cultures
R18791	T25736	T25735	punct	.,cultures
R18792	T25737	T25743	nsubjpass	Replication,compared
R18793	T25738	T25737	prep	of,Replication
R18794	T25739	T25741	det	the,viruses
R18795	T25740	T25741	amod	mutant,viruses
R18796	T25741	T25738	pobj	viruses,of
R18797	T25742	T25743	auxpass	was,compared
R18798	T25743	T25743	ROOT	compared,compared
R18799	T25744	T25743	prep	to,compared
R18800	T25745	T25747	amod	wild-type,replication
R18801	T25746	T25747	compound	virus,replication
R18802	T25747	T25744	pobj	replication,to
R18803	T25748	T25747	prep	under,replication
R18804	T25749	T25752	det	the,conditions
R18805	T25750	T25752	amod	same,conditions
R18806	T25751	T25752	amod	experimental,conditions
R18807	T25752	T25748	pobj	conditions,under
R18808	T25753	T25748	punct	(,under
R18809	T25754	T25747	prep	without,replication
R18810	T25755	T25754	cc	and,without
R18811	T25756	T25754	conj	with,without
R18812	T25757	T25758	compound	MTb,co-infection
R18813	T25758	T25756	pobj	co-infection,with
R18814	T25759	T25758	punct	",",co-infection
R18815	T25760	T25743	advmod	respectively,compared
R18816	T25761	T25743	punct	),compared
R18817	T25762	T25743	punct	.,compared
R18818	T25763	T25765	punct	*,p
R18819	T25764	T25765	punct	",",p
R18820	T25765	T25765	ROOT	p,p
R18821	T25766	T25765	advmod	<,p
R18822	T25767	T25766	nummod	0.05,<
R18823	T25768	T25776	punct	;,compared
R18824	T25769	T25776	punct	**,compared
R18825	T25770	T25776	punct	",",compared
R18826	T25771	T25772	compound	p,<
R18827	T25772	T25773	compound	<,0.01
R18828	T25773	T25776	nsubjpass	0.01,compared
R18829	T25774	T25776	punct	",",compared
R18830	T25775	T25776	mark	as,compared
R18831	T25776	T25765	prep	compared,p
R18832	T25777	T25776	prep	to,compared
R18833	T25778	T25780	compound	HIV-1Lai,Bal-Env-WT
R18834	T25779	T25780	compound	/,Bal-Env-WT
R18835	T25780	T25777	pobj	Bal-Env-WT,to
R18836	T25781	T25776	punct	.,compared
R18996	T26122	T26119	pobj	donors,from
R18997	T26123	T26124	auxpass	were,infected
R18998	T26124	T26124	ROOT	infected,infected
R18999	T26125	T26124	prep	with,infected
R19000	T26126	T26127	nummod	1000,TCID50
R19001	T26127	T26125	pobj	TCID50,with
R19002	T26128	T26127	prep	of,TCID50
R19003	T26129	T26131	amod	HIV-1Lai,Bal-env
R19004	T26130	T26131	compound	/,Bal-env
R19005	T26131	T26128	pobj	Bal-env,of
R19006	T26132	T26131	conj	WT,Bal-env
R19007	T26133	T26132	cc	or,WT
R19008	T26134	T26135	det	the,mutants
R19009	T26135	T26132	conj	mutants,WT
R19010	T26136	T26137	compound	HIV-1Lai,/
R19011	T26137	T26139	compound	/,I-Mut
R19012	T26138	T26139	compound	Bal-env-κB,I-Mut
R19013	T26139	T26132	conj	I-Mut,WT
R19014	T26140	T26139	punct	",",I-Mut
R19015	T26141	T26144	compound	HIV-1Lai,II-Mut
R19016	T26142	T26144	compound	/,II-Mut
R19017	T26143	T26144	compound	Bal-env-κB,II-Mut
R19018	T26144	T26139	conj	II-Mut,I-Mut
R19019	T26145	T26144	punct	",",II-Mut
R19020	T26146	T26149	compound	HIV-1Lai,I+II
R19021	T26147	T26149	compound	/,I+II
R19022	T26148	T26149	compound	Bal-env-κB,I+II
R19023	T26149	T26151	compound	I+II,Mut
R19024	T26150	T26151	punct	-,Mut
R19025	T26151	T26144	conj	Mut,II-Mut
R19026	T26152	T26151	punct	",",Mut
R19027	T26153	T26151	cc	or,Mut
R19028	T26154	T26156	amod	HIV-1Lai,Bal-env-N5-Mut
R19029	T26155	T26156	compound	/,Bal-env-N5-Mut
R19030	T26156	T26151	conj	Bal-env-N5-Mut,Mut
R19031	T26157	T26151	punct	",",Mut
R19032	T26158	T26124	cc	and,infected
R19033	T26159	T26164	auxpass	were,left
R19034	T26160	T26159	advmod	either,were
R19035	T26161	T26162	punct	(,A
R19036	T26162	T26159	dep	A,were
R19037	T26163	T26162	punct	),A
R19038	T26164	T26124	conj	left,infected
R19039	T26165	T26164	xcomp	infected,left
R19040	T26166	T26165	prep	with,infected
R19041	T26167	T26166	pobj	virus,with
R19042	T26168	T26165	advmod	alone,infected
R19043	T26169	T26165	cc	or,infected
R19044	T26170	T26171	punct	(,B
R19045	T26171	T26173	nmod	B,co-infected
R19046	T26172	T26171	punct	),B
R19047	T26173	T26165	conj	co-infected,infected
R19048	T26174	T26173	prep	with,co-infected
R19049	T26175	T26176	compound	MTb,CDC1551
R19050	T26176	T26174	pobj	CDC1551,with
R19051	T26177	T26178	punct	(,1
R19052	T26178	T26183	nummod	1,bacilli
R19053	T26179	T26183	punct	∶,bacilli
R19054	T26180	T26183	nummod	1,bacilli
R19074	T26200	T26199	cc	and,7
R19075	T26201	T26202	nummod	12,post-infection
R19076	T26202	T26199	conj	post-infection,7
R19077	T26203	T26194	punct	.,measured
R19078	T26204	T26225	advcl	Presentation,co-infected
R19079	T26205	T26204	prep	of,Presentation
R19080	T26206	T26208	amod	viral,levels
R19081	T26207	T26208	amod	p24,levels
R19082	T26208	T26205	pobj	levels,of
R19083	T26209	T26204	prep	at,Presentation
R19084	T26210	T26209	pobj	day,at
R19085	T26211	T26210	nummod	12,day
R19086	T26212	T26204	prep	in,Presentation
R19087	T26213	T26212	pobj	cultures,in
R19088	T26214	T26213	acl	infected,cultures
R19089	T26215	T26214	prep	with,infected
R19090	T26216	T26217	punct	(,C
R19091	T26217	T26215	pobj	C,with
R19092	T26218	T26217	punct	),C
R19093	T26219	T26225	nmod	HIV-1,co-infected
R19094	T26220	T26219	advmod	alone,HIV-1
R19095	T26221	T26219	cc	or,HIV-1
R19096	T26222	T26223	punct	(,D
R19097	T26223	T26219	conj	D,HIV-1
R19098	T26224	T26225	punct	),co-infected
R19099	T26225	T26229	nsubjpass	co-infected,shown
R19100	T26226	T26225	prep	with,co-infected
R19101	T26227	T26226	pobj	MTb,with
R19102	T26228	T26229	auxpass	are,shown
R19103	T26229	T26229	ROOT	shown,shown
R19104	T26230	T26229	prep	as,shown
R19105	T26231	T26230	pobj	histograms,as
R19106	T26232	T26229	punct	.,shown
R19107	T26233	T26236	punct	(,p
R19108	T26234	T26236	punct	*,p
R19109	T26235	T26236	punct	",",p
R19110	T26236	T26236	ROOT	p,p
R19111	T26237	T26236	advmod	<,p
R19112	T26238	T26237	nummod	0.05,<
R19113	T26239	T26244	punct	;,0.01
R19114	T26240	T26244	punct	**,0.01
R19115	T26241	T26244	punct	",",0.01
R19116	T26242	T26243	compound	p,<
R19117	T26243	T26244	compound	<,0.01
R19118	T26244	T26236	npadvmod	0.01,p
R19119	T26245	T26244	punct	",",0.01
R19120	T26246	T26247	mark	as,compared
R19121	T26247	T26244	advcl	compared,0.01
R19122	T26248	T26247	prep	to,compared
R19123	T26249	T26251	amod	HIV-1Lai,Bal-env
R19124	T26250	T26251	compound	/,Bal-env
R19125	T26251	T26248	pobj	Bal-env,to
R19126	T26252	T26251	appos	WT,Bal-env
R19127	T26253	T26251	punct	),Bal-env
R19128	T26254	T26236	punct	.,p
R18976	T26102	T26107	nsubj	Disruption,sites
R18977	T26103	T26102	prep	of,Disruption
R18978	T26104	T26103	pobj	NF-κB,of
R18979	T26105	T26104	cc	or,NF-κB
R18980	T26106	T26104	conj	NFAT5,NF-κB
R18981	T26107	T26107	ROOT	sites,sites
R18982	T26108	T26107	prep	in,sites
R18983	T26109	T26110	det	the,LTR
R18984	T26110	T26108	pobj	LTR,in
R18985	T26111	T26107	conj	inhibits,sites
R18986	T26112	T26114	amod	MTb-induced,replication
R18987	T26113	T26114	compound	HIV-1,replication
R18988	T26114	T26111	dobj	replication,inhibits
R18989	T26115	T26114	prep	in,replication
R18990	T26116	T26115	pobj	MDM,in
R18991	T26117	T26111	punct	.,inhibits
R18992	T26118	T26124	nsubjpass	MDM,infected
R18993	T26119	T26118	prep	from,MDM
R18994	T26120	T26122	nummod	four,donors
R18995	T26121	T26122	amod	normal,donors
R19055	T26181	T26183	nmod	MDM,bacilli
R19056	T26182	T26183	compound	∶,bacilli
R19057	T26183	T26124	npadvmod	bacilli,infected
R19058	T26184	T26124	punct	),infected
R19059	T26185	T26124	punct	.,infected
R19060	T26186	T26188	amod	Viral,levels
R19061	T26187	T26188	compound	p24,levels
R19062	T26188	T26194	nsubjpass	levels,measured
R19063	T26189	T26188	prep	in,levels
R19064	T26190	T26192	det	the,supernatants
R19065	T26191	T26192	compound	culture,supernatants
R19066	T26192	T26189	pobj	supernatants,in
R19067	T26193	T26194	auxpass	were,measured
R19068	T26194	T26194	ROOT	measured,measured
R19069	T26195	T26194	prep	at,measured
R19070	T26196	T26195	pobj	days,at
R19071	T26197	T26196	nummod	4,days
R19072	T26198	T26196	punct	",",days
R19073	T26199	T26196	conj	7,days

bionlp-st-ge-2016-test-tees

Id	Subject	Object	Predicate	Lexical cue
T26079	4366-4368	Protein	denotes	WT
T26078	4362-4365	Protein	denotes	env
T26077	4194-4197	Protein	denotes	p24
T26076	4083-4086	Protein	denotes	p24
T26075	3966-3969	Protein	denotes	Mut
T26074	3963-3965	Protein	denotes	N5
T26073	3959-3962	Protein	denotes	env
T26072	3938-3941	Protein	denotes	Mut
T26071	3930-3937	Protein	denotes	κB I+II
T26070	3926-3929	Protein	denotes	env
T26069	3908-3911	Protein	denotes	Mut
T26068	3902-3907	Protein	denotes	κB II
T26067	3898-3901	Protein	denotes	env
T26066	3880-3883	Protein	denotes	Mut
T26065	3875-3879	Protein	denotes	κB I
T26064	3871-3874	Protein	denotes	env
T26063	3840-3842	Protein	denotes	WT
T26062	3836-3839	Protein	denotes	env
T26061	3668-3678	Binding	denotes	Disruption
T26060	3668-3678	Binding	denotes	Disruption
T26059	3691-3702	Protein	denotes	NFAT5 sites
T26058	3682-3687	Protein	denotes	NF-κB
T25555	2644-2646	Protein	denotes	WT
T25554	2640-2643	Protein	denotes	Env
T25553	2318-2321	Protein	denotes	p24
T25552	2207-2210	Protein	denotes	p24
T25551	2099-2102	Protein	denotes	Mut
T25550	2096-2098	Protein	denotes	N5
T25549	2092-2095	Protein	denotes	env
T25548	2071-2074	Protein	denotes	Mut
T25547	2063-2070	Protein	denotes	κB I+II
T25546	2059-2062	Protein	denotes	env
T25545	2041-2044	Protein	denotes	Mut
T25544	2035-2040	Protein	denotes	κB II
T25543	2031-2034	Protein	denotes	env
T25542	2013-2016	Protein	denotes	Mut
T25541	2008-2012	Protein	denotes	κB I
T25540	2004-2007	Protein	denotes	env
T25539	1973-1975	Protein	denotes	WT
T25538	1969-1972	Protein	denotes	env
T25537	1742-1752	Negative_regulation	denotes	disruption
T25536	1742-1752	Negative_regulation	denotes	disruption
T25535	1742-1752	Negative_regulation	denotes	disruption
T25534	1796-1815	Protein	denotes	HIV-1 subtype B LTR
T25533	1769-1788	Protein	denotes	NFAT5 binding sites
T25532	1760-1765	Protein	denotes	NF-κB
T25531	1694-1701	Binding	denotes	binding
T25530	1694-1701	Binding	denotes	binding
T25529	1715-1720	Protein	denotes	NF-κB
T25528	1705-1710	Protein	denotes	NFAT5
T13408	3474-3477	Protein	denotes	env
T13407	3443-3446	Protein	denotes	Mut
T13406	3437-3442	Protein	denotes	κB II
T13405	3433-3436	Protein	denotes	env
T13404	3406-3409	Protein	denotes	Mut
T13403	3401-3405	Protein	denotes	κB I
T13402	3397-3400	Protein	denotes	env
T13401	3047-3050	Protein	denotes	Mut
T13400	3044-3046	Protein	denotes	N5
T13399	3040-3043	Protein	denotes	env
T13398	3019-3022	Protein	denotes	Mut
T13397	3011-3018	Protein	denotes	κB I+II
T13396	3007-3010	Protein	denotes	env
T13395	2989-2992	Protein	denotes	Mut
T13394	2983-2988	Protein	denotes	κB II
T13393	2979-2982	Protein	denotes	env
T13392	2961-2964	Protein	denotes	Mut
T13381	1220-1223	Protein	denotes	Mut
T13380	1217-1219	Protein	denotes	N5
T13379	1213-1216	Protein	denotes	env
T13378	1192-1195	Protein	denotes	Mut
T13377	1184-1191	Protein	denotes	κB I+II
T13376	1180-1183	Protein	denotes	env
T13375	1162-1165	Protein	denotes	Mut
T13374	1156-1161	Protein	denotes	κB II
T13373	1152-1155	Protein	denotes	env
T13372	1063-1066	Protein	denotes	p24
T13371	844-853	Negative_regulation	denotes	reduction
T13370	844-853	Negative_regulation	denotes	reduction
T13369	844-853	Negative_regulation	denotes	reduction
T13368	844-853	Negative_regulation	denotes	reduction
T13367	844-853	Negative_regulation	denotes	reduction
T13366	977-980	Protein	denotes	Mut
T13365	974-976	Protein	denotes	N5
T13364	969-972	Protein	denotes	env
T13363	947-950	Protein	denotes	Mut
T13362	939-946	Protein	denotes	κB I+II
T13361	935-938	Protein	denotes	env
T13360	917-920	Protein	denotes	Mut
T13359	911-916	Protein	denotes	κB II
T13358	907-910	Protein	denotes	env
T13357	889-892	Protein	denotes	Mut
T13356	884-888	Protein	denotes	κB I
T13355	880-883	Protein	denotes	env
T13354	475-478	Protein	denotes	p24
T13353	186-193	Binding	denotes	binding
T13352	186-193	Binding	denotes	binding
T13351	180-185	Protein	denotes	NFAT5
T13350	171-176	Protein	denotes	NF-κB
T13349	16-23	Binding	denotes	binding
T13348	16-23	Binding	denotes	binding
T13347	61-64	Protein	denotes	MTb
T13346	10-15	Protein	denotes	NFAT5
T13345	0-5	Protein	denotes	NF-κB
T13438	6064-6075	Protein	denotes	NF-κB sites
T13437	5968-5986	Protein	denotes	NFAT5 binding site
T13436	5650-5657	Positive_regulation	denotes	induced
T13435	5631-5641	Gene_expression	denotes	expression
T13434	5528-5537	Positive_regulation	denotes	activated
T13433	5814-5817	Protein	denotes	MDM
T13432	5752-5757	Protein	denotes	NFAT5
T13431	5739-5744	Protein	denotes	NF-κB
T13430	5620-5630	Protein	denotes	NFAT5 gene
T13429	5568-5571	Protein	denotes	TLR
T13428	5549-5552	Protein	denotes	MDM
T13427	5507-5512	Protein	denotes	NF-κB
T13426	5137-5140	Protein	denotes	p24
T13425	5043-5046	Protein	denotes	Mut
T13424	5038-5042	Protein	denotes	κB I
T13423	5034-5037	Protein	denotes	env
T13422	5009-5011	Protein	denotes	κB
T13421	5000-5008	Protein	denotes	NFAT5/NF
T13420	4958-4963	Protein	denotes	NF-κB
T13419	4802-4804	Protein	denotes	κB
T13418	4798-4801	Protein	denotes	env
T13417	4777-4780	Protein	denotes	Mut
T13416	4771-4776	Protein	denotes	κB II
T13415	4767-4770	Protein	denotes	env
T13414	4682-4685	Protein	denotes	p24
T13413	4592-4601	Negative_regulation	denotes	inhibited
T13412	4562-4565	Protein	denotes	p24
T13411	4427-4436	Positive_regulation	denotes	increased
T13410	4416-4419	Protein	denotes	p24
T13409	3478-3480	Protein	denotes	κB
T13391	2956-2960	Protein	denotes	κB I
T13390	2952-2955	Protein	denotes	env
T13389	2707-2712	Protein	denotes	NFAT5
T13388	2697-2702	Protein	denotes	NF-κB
T13387	1570-1573	Protein	denotes	MTb
T13386	1561-1566	Protein	denotes	NFAT5
T13385	1551-1556	Protein	denotes	NF-κB
T13384	1255-1258	Protein	denotes	Mut
T13383	1250-1254	Protein	denotes	κB I
T13382	1246-1249	Protein	denotes	env
R10098	T13351	T13353	themeOf	NFAT5,binding
R10099	T13357	T13367	themeOf	Mut,reduction
R10100	T13360	T13368	themeOf	Mut,reduction
R10101	T13363	T13369	themeOf	Mut,reduction
R10102	T13365	T13370	themeOf	N5,reduction
R10103	T13366	T13371	themeOf	Mut,reduction
R10104	T13410	T13411	themeOf	p24,increased
R10105	T13412	T13413	themeOf	p24,inhibited
R10106	T13427	T13434	themeOf	NF-κB,activated
R10107	T13430	T13435	themeOf	NFAT5 gene,expression
R10108	T13435	T13436	themeOf	expression,induced
R18972	T26058	T26060	themeOf	NF-κB,Disruption
R18973	T26059	T26061	themeOf	NFAT5 sites,Disruption
R10095	T13345	T13348	themeOf	NF-κB,binding
R10096	T13346	T13349	themeOf	NFAT5,binding
R10097	T13350	T13352	themeOf	NF-κB,binding
R18629	T25528	T25530	themeOf	NFAT5,binding
R18630	T25529	T25531	themeOf	NF-κB,binding
R18631	T25532	T25535	themeOf	NF-κB,disruption
R18632	T25533	T25536	themeOf	NFAT5 binding sites,disruption
R18633	T25534	T25537	themeOf	HIV-1 subtype B LTR,disruption

testone

Id	Subject	Object	Predicate	Lexical cue
T25838	4362-4365	Protein	denotes	env
T25837	4194-4197	Protein	denotes	p24
T25836	4083-4086	Protein	denotes	p24
T25835	3959-3962	Protein	denotes	env
T25834	3926-3929	Protein	denotes	env
T25833	3898-3901	Protein	denotes	env
T25832	3871-3874	Protein	denotes	env
T25831	3836-3839	Protein	denotes	env
T25251	2207-2210	Protein	denotes	p24
T25250	2092-2095	Protein	denotes	env
T25249	2059-2062	Protein	denotes	env
T25248	2031-2034	Protein	denotes	env
T25247	2004-2007	Protein	denotes	env
T25246	1969-1972	Protein	denotes	env
T25245	1705-1710	Protein	denotes	NFAT5
T25253	1694-1701	Binding	denotes	binding
T25252	2318-2321	Protein	denotes	p24
T12228	5650-5657	Positive_regulation	denotes	induced
T12227	5631-5641	Gene_expression	denotes	expression
T12226	5052-5062	Negative_regulation	denotes	diminished
T12225	4592-4601	Negative_regulation	denotes	inhibited
T12224	3562-3569	Negative_regulation	denotes	reduced
T12223	16-23	Binding	denotes	binding
T12222	5620-5625	Protein	denotes	NFAT5
T12221	5137-5140	Protein	denotes	p24
T12220	5034-5037	Protein	denotes	env
T12219	4798-4801	Protein	denotes	env
T12218	4767-4770	Protein	denotes	env
T12217	4682-4685	Protein	denotes	p24
T12216	4638-4641	Protein	denotes	env
T12215	4562-4565	Protein	denotes	p24
T12214	4416-4419	Protein	denotes	p24
T12213	3523-3526	Protein	denotes	env
T12212	3474-3477	Protein	denotes	env
T12211	3433-3436	Protein	denotes	env
T12210	3397-3400	Protein	denotes	env
T12209	3040-3043	Protein	denotes	env
T12208	3007-3010	Protein	denotes	env
T12207	2979-2982	Protein	denotes	env
T12206	2952-2955	Protein	denotes	env
T12205	2903-2906	Protein	denotes	env
T12204	1561-1566	Protein	denotes	NFAT5
T12203	1246-1249	Protein	denotes	env
T12202	1213-1216	Protein	denotes	env
T12201	1180-1183	Protein	denotes	env
T12200	1152-1155	Protein	denotes	env
T12199	1063-1066	Protein	denotes	p24
T12198	969-972	Protein	denotes	env
T12197	935-938	Protein	denotes	env
T12196	907-910	Protein	denotes	env
T12195	880-883	Protein	denotes	env
T12194	475-478	Protein	denotes	p24
T12193	318-321	Protein	denotes	env
T12192	180-185	Protein	denotes	NFAT5
T12191	10-15	Protein	denotes	NFAT5
R9360	T12191	T12223	themeOf	NFAT5,binding
R9361	T12215	T12225	themeOf	p24,inhibited
R9362	T12222	T12227	themeOf	NFAT5,expression
R9363	T12227	T12228	themeOf	expression,induced
R18446	T25245	T25253	themeOf	NFAT5,binding

test3

Id	Subject	Object	Predicate	Lexical cue
T25854	4362-4365	Protein	denotes	env
T25853	4194-4197	Protein	denotes	p24
T25852	4083-4086	Protein	denotes	p24
T25851	3959-3962	Protein	denotes	env
T25850	3926-3929	Protein	denotes	env
T25849	3898-3901	Protein	denotes	env
T25848	3871-3874	Protein	denotes	env
T25847	3836-3839	Protein	denotes	env
T25846	4362-4365	Protein	denotes	env
T25845	4194-4197	Protein	denotes	p24
T25844	4083-4086	Protein	denotes	p24
T25843	3959-3962	Protein	denotes	env
T25842	3926-3929	Protein	denotes	env
T25841	3898-3901	Protein	denotes	env
T25840	3871-3874	Protein	denotes	env
T25839	3836-3839	Protein	denotes	env
T25270	2318-2321	Protein	denotes	p24
T25269	2207-2210	Protein	denotes	p24
T25268	2092-2095	Protein	denotes	env
T25267	2059-2062	Protein	denotes	env
T25266	2031-2034	Protein	denotes	env
T25265	2004-2007	Protein	denotes	env
T25264	1969-1972	Protein	denotes	env
T25263	1705-1710	Protein	denotes	NFAT5
T25262	1694-1701	Binding	denotes	binding
T25261	2318-2321	Protein	denotes	p24
T25260	2207-2210	Protein	denotes	p24
T25259	2092-2095	Protein	denotes	env
T25258	2059-2062	Protein	denotes	env
T25257	2031-2034	Protein	denotes	env
T25256	2004-2007	Protein	denotes	env
T25255	1969-1972	Protein	denotes	env
T25254	1705-1710	Protein	denotes	NFAT5
T12296	5620-5625	Protein	denotes	NFAT5
T12295	5137-5140	Protein	denotes	p24
T12294	5052-5062	Negative_regulation	denotes	diminished
T12293	5034-5037	Protein	denotes	env
T12292	4798-4801	Protein	denotes	env
T12291	4767-4770	Protein	denotes	env
T12290	4682-4685	Protein	denotes	p24
T12289	4638-4641	Protein	denotes	env
T12288	4592-4601	Negative_regulation	denotes	inhibited
T12287	4562-4565	Protein	denotes	p24
T12286	4427-4436	Positive_regulation	denotes	increased
T12285	4416-4419	Protein	denotes	p24
T12284	3562-3569	Negative_regulation	denotes	reduced
T12283	3523-3526	Protein	denotes	env
T12282	3474-3477	Protein	denotes	env
T12281	3433-3436	Protein	denotes	env
T12280	3397-3400	Protein	denotes	env
T12279	3040-3043	Protein	denotes	env
T12278	3007-3010	Protein	denotes	env
T12277	2979-2982	Protein	denotes	env
T12276	2952-2955	Protein	denotes	env
T12275	2903-2906	Protein	denotes	env
T12274	1561-1566	Protein	denotes	NFAT5
T12273	1246-1249	Protein	denotes	env
T12272	1213-1216	Protein	denotes	env
T12271	1180-1183	Protein	denotes	env
T12270	1152-1155	Protein	denotes	env
T12269	1063-1066	Protein	denotes	p24
T12268	969-972	Protein	denotes	env
T12267	935-938	Protein	denotes	env
T12266	907-910	Protein	denotes	env
T12265	880-883	Protein	denotes	env
T12264	475-478	Protein	denotes	p24
T12263	318-321	Protein	denotes	env
T12262	180-185	Protein	denotes	NFAT5
T12261	10-15	Protein	denotes	NFAT5
T12260	5620-5625	Protein	denotes	NFAT5
T12259	5137-5140	Protein	denotes	p24
T12258	5034-5037	Protein	denotes	env
T12257	4798-4801	Protein	denotes	env
T12256	4767-4770	Protein	denotes	env
T12255	4682-4685	Protein	denotes	p24
T12254	4638-4641	Protein	denotes	env
T12253	4562-4565	Protein	denotes	p24
T12252	4416-4419	Protein	denotes	p24
T12251	3523-3526	Protein	denotes	env
T12250	3474-3477	Protein	denotes	env
T12249	3433-3436	Protein	denotes	env
T12248	3397-3400	Protein	denotes	env
T12247	3040-3043	Protein	denotes	env
T12246	3007-3010	Protein	denotes	env
T12245	2979-2982	Protein	denotes	env
T12244	2952-2955	Protein	denotes	env
T12243	2903-2906	Protein	denotes	env
T12242	1561-1566	Protein	denotes	NFAT5
T12241	1246-1249	Protein	denotes	env
T12240	1213-1216	Protein	denotes	env
T12239	1180-1183	Protein	denotes	env
T12238	1152-1155	Protein	denotes	env
T12237	1063-1066	Protein	denotes	p24
T12236	969-972	Protein	denotes	env
T12235	935-938	Protein	denotes	env
T12234	907-910	Protein	denotes	env
T12233	880-883	Protein	denotes	env
T12232	475-478	Protein	denotes	p24
T12231	318-321	Protein	denotes	env
T12230	180-185	Protein	denotes	NFAT5
T12229	10-15	Protein	denotes	NFAT5
R9364	T12285	T12286	themeOf	p24,increased
R9365	T12287	T12288	themeOf	p24,inhibited
R18447	T25263	T25262	themeOf	NFAT5,binding

PMC:3320587 / 31873-37949 JSONTXT

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PMC:3320587 / 31873-37949 JSON TXT