PMC:3320587 / 301-510
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T241 | 196-203 | JJ | denotes | nuclear |
| T240 | 189-195 | NN | denotes | factor |
| T239 | 175-188 | NN | denotes | transcription |
| T238 | 171-174 | DT | denotes | the |
| T237 | 168-170 | IN | denotes | of |
| T236 | 157-167 | NN | denotes | expression |
| T235 | 153-156 | DT | denotes | the |
| T234 | 150-152 | IN | denotes | of |
| T233 | 140-149 | NN | denotes | silencing |
| T232 | 135-139 | IN | denotes | that |
| T231 | 123-134 | VB | denotes | demonstrate |
| T230 | 120-122 | PRP | denotes | we |
| T229 | 118-119 | -COMMA- | denotes | , |
| T228 | 114-118 | RB | denotes | Here |
| T227 | 108-112 | NN | denotes | load |
| T226 | 102-107 | JJ | denotes | viral |
| T225 | 99-101 | IN | denotes | in |
| T224 | 90-98 | NN | denotes | increase |
| T223 | 87-89 | DT | denotes | an |
| T222 | 84-86 | TO | denotes | to |
| T221 | 76-83 | VB | denotes | leading |
| T220 | 74-75 | -COMMA- | denotes | , |
| T219 | 63-74 | NN | denotes | replication |
| T218 | 57-62 | NN | denotes | HIV-1 |
| T217 | 47-56 | VB | denotes | stimulate |
| T216 | 42-46 | WDT | denotes | that |
| T215 | 33-41 | NN | denotes | cascades |
| T214 | 23-32 | NN | denotes | signaling |
| T213 | 16-22 | JJ | denotes | immune |
| T212 | 7-15 | JJ | denotes | adaptive |
| T211 | 3-6 | CC | denotes | and |
| R45 | T215 | T214 | arg1Of | cascades,signaling |
| R46 | T215 | T216 | arg1Of | cascades,that |
| R47 | T215 | T217 | arg1Of | cascades,stimulate |
| R48 | T217 | T220 | arg1Of | stimulate,"," |
| R49 | T217 | T221 | modOf | stimulate,leading |
| R50 | T219 | T217 | arg2Of | replication,stimulate |
| R51 | T219 | T218 | arg1Of | replication,HIV-1 |
| R52 | T221 | T222 | arg1Of | leading,to |
| R53 | T224 | T222 | arg2Of | increase,to |
| R54 | T224 | T223 | arg1Of | increase,an |
| R55 | T224 | T225 | arg1Of | increase,in |
| R56 | T227 | T225 | arg2Of | load,in |
| R57 | T227 | T226 | arg1Of | load,viral |
| R58 | T230 | T231 | arg1Of | we,demonstrate |
| R59 | T231 | T228 | arg1Of | demonstrate,Here |
| R60 | T231 | T229 | arg1Of | demonstrate,"," |
| R61 | T233 | T234 | arg1Of | silencing,of |
| R63 | T236 | T234 | arg2Of | expression,of |
| R64 | T236 | T235 | arg1Of | expression,the |
| R65 | T236 | T237 | arg1Of | expression,of |
| R40 | T212 | T211 | arg2Of | adaptive,and |
| R43 | T215 | T212 | arg1Of | cascades,adaptive |
| R44 | T215 | T213 | arg1Of | cascades,immune |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T102 | 23-41 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling cascades |
| T100 | 23-32 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
| T99 | 175-188 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T767 | 140-149 | Negative_regulation | denotes | silencing |
| T768 | 157-167 | Gene_expression | denotes | expression |
| R591 | T768 | T767 | themeOf | expression,silencing |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T452 | 157-167 | Gene_expression | denotes | expression |
| T453 | 140-149 | Negative_regulation | denotes | silencing |
| R517 | T452 | T453 | themeOf | expression,silencing |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T432 | 157-167 | Gene_expression | denotes | expression |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T568 | 123-134 | VBP | denotes | demonstrate |
| T567 | 120-122 | PRP | denotes | we |
| T566 | 118-119 | , | denotes | , |
| T565 | 114-118 | RB | denotes | Here |
| T564 | 112-113 | . | denotes | . |
| T563 | 108-112 | NN | denotes | load |
| T562 | 102-107 | JJ | denotes | viral |
| T561 | 99-101 | IN | denotes | in |
| T560 | 90-98 | NN | denotes | increase |
| T559 | 87-89 | DT | denotes | an |
| T558 | 84-86 | TO | denotes | to |
| T557 | 76-83 | VBG | denotes | leading |
| T556 | 74-75 | , | denotes | , |
| T555 | 63-74 | NN | denotes | replication |
| T554 | 57-62 | JJ | denotes | HIV-1 |
| T553 | 47-56 | VBP | denotes | stimulate |
| T552 | 42-46 | WDT | denotes | that |
| T551 | 33-41 | NNS | denotes | cascades |
| T550 | 23-32 | VBG | denotes | signaling |
| T549 | 16-22 | JJ | denotes | immune |
| T548 | 7-15 | JJ | denotes | adaptive |
| T547 | 3-6 | CC | denotes | and |
| T569 | 135-139 | IN | denotes | that |
| T570 | 140-149 | VBG | denotes | silencing |
| T571 | 150-152 | IN | denotes | of |
| T572 | 153-156 | DT | denotes | the |
| T573 | 157-167 | NN | denotes | expression |
| T574 | 168-170 | IN | denotes | of |
| T575 | 171-174 | DT | denotes | the |
| T576 | 175-188 | NN | denotes | transcription |
| T577 | 189-195 | NN | denotes | factor |
| T578 | 196-203 | JJ | denotes | nuclear |
| R301 | T548 | T550 | amod | adaptive,signaling |
| R302 | T549 | T550 | amod | immune,signaling |
| R304 | T551 | T550 | dobj | cascades,signaling |
| R305 | T552 | T553 | nsubj | that,stimulate |
| R306 | T553 | T551 | relcl | stimulate,cascades |
| R307 | T554 | T555 | compound | HIV-1,replication |
| R308 | T555 | T553 | dobj | replication,stimulate |
| R309 | T556 | T550 | punct | ",",signaling |
| R310 | T557 | T550 | conj | leading,signaling |
| R311 | T558 | T557 | prep | to,leading |
| R312 | T559 | T560 | det | an,increase |
| R313 | T560 | T558 | pobj | increase,to |
| R314 | T561 | T560 | prep | in,increase |
| R315 | T562 | T563 | amod | viral,load |
| R316 | T563 | T561 | pobj | load,in |
| R318 | T565 | T568 | advmod | Here,demonstrate |
| R319 | T566 | T568 | punct | ",",demonstrate |
| R320 | T567 | T568 | nsubj | we,demonstrate |
| R321 | T568 | T568 | ROOT | demonstrate,demonstrate |
| R529 | T571 | T570 | prep | of,silencing |
| R530 | T572 | T573 | det | the,expression |
| R531 | T573 | T571 | pobj | expression,of |
| R532 | T574 | T573 | prep | of,expression |
| R533 | T575 | T577 | det | the,factor |
| R534 | T576 | T577 | compound | transcription,factor |
| R535 | T577 | T574 | pobj | factor,of |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T130 | 140-149 | Negative_regulation | denotes | silencing |
| T129 | 140-149 | Negative_regulation | denotes | silencing |
| T128 | 140-149 | Negative_regulation | denotes | silencing |
| T127 | 157-167 | Gene_expression | denotes | expression |
| T125 | 157-167 | Gene_expression | denotes | expression |
| T126 | 157-167 | Gene_expression | denotes | expression |
| R19 | T127 | T130 | themeOf | expression,silencing |
| R469 | T125 | T128 | themeOf | expression,silencing |
| R470 | T126 | T129 | themeOf | expression,silencing |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 140-149 | Negative_regulation | denotes | silencing |