PMC:3320587 / 2491-2707
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1134 | 214-215 | -RRB- | denotes | ] |
| T1133 | 213-214 | CD | denotes | 2 |
| T1132 | 212-213 | -LRB- | denotes | [ |
| T1131 | 210-211 | -COMMA- | denotes | , |
| T1130 | 209-210 | -RRB- | denotes | ] |
| T1129 | 208-209 | CD | denotes | 1 |
| T1128 | 207-208 | -LRB- | denotes | [ |
| T1127 | 205-206 | -RRB- | denotes | ) |
| T1126 | 200-205 | NN | denotes | HIV-1 |
| T1125 | 199-200 | -LRB- | denotes | ( |
| T1124 | 197-198 | CD | denotes | 1 |
| T1123 | 192-196 | NN | denotes | type |
| T1122 | 186-191 | NN | denotes | virus |
| T1121 | 169-185 | NN | denotes | immunodeficiency |
| T1120 | 163-168 | JJ | denotes | human |
| T1119 | 158-162 | IN | denotes | with |
| T1118 | 149-157 | VB | denotes | infected |
| T1117 | 140-148 | NN | denotes | patients |
| T1116 | 137-139 | IN | denotes | in |
| T1115 | 131-136 | NN | denotes | death |
| T1114 | 128-130 | IN | denotes | of |
| T1113 | 122-127 | NN | denotes | cause |
| T1112 | 118-121 | CC | denotes | and |
| T1111 | 105-117 | NN | denotes | co-infection |
| T1110 | 98-104 | JJ | denotes | common |
| T1109 | 93-97 | RB | denotes | most |
| T1108 | 89-92 | DT | denotes | the |
| T1107 | 86-88 | VB | denotes | is |
| T1106 | 84-85 | -COMMA- | denotes | , |
| T1105 | 83-84 | -RRB- | denotes | ) |
| T1104 | 81-83 | NN | denotes | TB |
| T1103 | 80-81 | -LRB- | denotes | ( |
| T1102 | 67-79 | NN | denotes | tuberculosis |
| T1101 | 64-66 | IN | denotes | of |
| T1100 | 58-63 | NN | denotes | agent |
| T1099 | 48-57 | JJ | denotes | causative |
| T1098 | 44-47 | DT | denotes | the |
| T1097 | 42-43 | -COMMA- | denotes | , |
| T1096 | 41-42 | -RRB- | denotes | ) |
| T1095 | 38-41 | NN | denotes | MTb |
| T1094 | 37-38 | -LRB- | denotes | ( |
| T1093 | 24-36 | NN | denotes | tuberculosis |
| T1092 | 10-23 | NN | denotes | Mycobacterium |
| R663 | T1093 | T1092 | arg1Of | tuberculosis,Mycobacterium |
| R664 | T1093 | T1094 | arg1Of | tuberculosis,( |
| R665 | T1093 | T1097 | arg1Of | tuberculosis,"," |
| R666 | T1093 | T1107 | arg1Of | tuberculosis,is |
| R667 | T1095 | T1094 | arg2Of | MTb,( |
| R668 | T1096 | T1094 | arg3Of | ),( |
| R669 | T1100 | T1097 | arg2Of | agent,"," |
| R670 | T1100 | T1098 | arg1Of | agent,the |
| R671 | T1100 | T1099 | arg1Of | agent,causative |
| R672 | T1100 | T1101 | arg1Of | agent,of |
| R673 | T1102 | T1101 | arg2Of | tuberculosis,of |
| R674 | T1102 | T1103 | arg1Of | tuberculosis,( |
| R675 | T1104 | T1103 | arg2Of | TB,( |
| R676 | T1105 | T1103 | arg3Of | ),( |
| R677 | T1107 | T1106 | arg1Of | is,"," |
| R678 | T1110 | T1109 | arg1Of | common,most |
| R679 | T1111 | T1112 | arg1Of | co-infection,and |
| R680 | T1112 | T1107 | arg2Of | and,is |
| R681 | T1112 | T1108 | arg1Of | and,the |
| R682 | T1112 | T1110 | arg1Of | and,common |
| R683 | T1112 | T1114 | arg1Of | and,of |
| R684 | T1113 | T1112 | arg2Of | cause,and |
| R685 | T1115 | T1114 | arg2Of | death,of |
| R686 | T1115 | T1116 | arg1Of | death,in |
| R687 | T1117 | T1116 | arg2Of | patients,in |
| R688 | T1117 | T1118 | arg2Of | patients,infected |
| R689 | T1118 | T1119 | arg1Of | infected,with |
| R690 | T1123 | T1119 | arg2Of | type,with |
| R691 | T1123 | T1120 | arg1Of | type,human |
| R692 | T1123 | T1121 | arg1Of | type,immunodeficiency |
| R693 | T1123 | T1122 | arg1Of | type,virus |
| R694 | T1123 | T1124 | arg1Of | type,1 |
| R695 | T1123 | T1125 | arg1Of | type,( |
| R696 | T1123 | T1128 | arg1Of | type,[ |
| R697 | T1123 | T1131 | arg1Of | type,"," |
| R698 | T1123 | T1132 | arg1Of | type,[ |
| R699 | T1126 | T1125 | arg2Of | HIV-1,( |
| R700 | T1127 | T1125 | arg3Of | ),( |
| R701 | T1129 | T1128 | arg2Of | 1,[ |
| R702 | T1130 | T1128 | arg3Of | ],[ |
| R703 | T1133 | T1132 | arg2Of | 2,[ |
| R704 | T1134 | T1132 | arg3Of | ],[ |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T998 | 131-136 | http://purl.obolibrary.org/obo/GO_0016265 | denotes | death |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T925 | 10-216 | Sentence | denotes | Mycobacterium tuberculosis (MTb), the causative agent of tuberculosis (TB), is the most common co-infection and cause of death in patients infected with human immunodeficiency virus type 1 (HIV-1) [1], [2]. |
| T17 | 10-216 | Sentence | denotes | Mycobacterium tuberculosis (MTb), the causative agent of tuberculosis (TB), is the most common co-infection and cause of death in patients infected with human immunodeficiency virus type 1 (HIV-1) [1], [2]. |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1035 | 24-36 | http://purl.bioontology.org/ontology/ICD10/A15-A19.9 | denotes | tuberculosis |
| T1037 | 169-185 | http://purl.bioontology.org/ontology/ICD10/D84.9 | denotes | immunodeficiency |
| T1036 | 67-79 | http://purl.bioontology.org/ontology/ICD10/A15-A19.9 | denotes | tuberculosis |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2713 | 38-41 | Protein | denotes | MTb |
| T2709 | 163-206 | Protein | denotes | human immunodeficiency virus type 1 (HIV-1) |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1970 | 215-216 | . | denotes | . |
| T1969 | 214-215 | NNP | denotes | ] |
| T1968 | 213-214 | CD | denotes | 2 |
| T1967 | 212-213 | NNP | denotes | [ |
| T1966 | 210-211 | , | denotes | , |
| T1965 | 209-210 | NNP | denotes | ] |
| T1964 | 208-209 | CD | denotes | 1 |
| T1963 | 207-208 | NN | denotes | [ |
| T1962 | 205-206 | -RRB- | denotes | ) |
| T1961 | 200-205 | NN | denotes | HIV-1 |
| T1960 | 199-200 | -LRB- | denotes | ( |
| T1959 | 197-198 | CD | denotes | 1 |
| T1958 | 192-196 | NN | denotes | type |
| T1957 | 186-191 | NN | denotes | virus |
| T1956 | 169-185 | NN | denotes | immunodeficiency |
| T1955 | 163-168 | JJ | denotes | human |
| T1954 | 158-162 | IN | denotes | with |
| T1953 | 149-157 | VBN | denotes | infected |
| T1952 | 140-148 | NNS | denotes | patients |
| T1951 | 137-139 | IN | denotes | in |
| T1950 | 131-136 | NN | denotes | death |
| T1949 | 128-130 | IN | denotes | of |
| T1948 | 122-127 | NN | denotes | cause |
| T1947 | 118-121 | CC | denotes | and |
| T1946 | 105-117 | NN | denotes | co-infection |
| T1945 | 98-104 | JJ | denotes | common |
| T1944 | 93-97 | RBS | denotes | most |
| T1943 | 89-92 | DT | denotes | the |
| T1942 | 86-88 | VBZ | denotes | is |
| T1941 | 84-85 | , | denotes | , |
| T1940 | 83-84 | -RRB- | denotes | ) |
| T1939 | 81-83 | NN | denotes | TB |
| T1938 | 80-81 | -LRB- | denotes | ( |
| T1937 | 67-79 | NN | denotes | tuberculosis |
| T1936 | 64-66 | IN | denotes | of |
| T1935 | 58-63 | NN | denotes | agent |
| T1934 | 48-57 | JJ | denotes | causative |
| T1933 | 44-47 | DT | denotes | the |
| T1932 | 42-43 | , | denotes | , |
| T1931 | 41-42 | -RRB- | denotes | ) |
| T1930 | 38-41 | NNP | denotes | MTb |
| T1929 | 37-38 | -LRB- | denotes | ( |
| T1928 | 24-36 | NN | denotes | tuberculosis |
| T1927 | 10-23 | NNP | denotes | Mycobacterium |
| R1404 | T1927 | T1928 | compound | Mycobacterium,tuberculosis |
| R1405 | T1928 | T1942 | nsubj | tuberculosis,is |
| R1407 | T1929 | T1930 | punct | (,MTb |
| R1411 | T1930 | T1928 | appos | MTb,tuberculosis |
| R1413 | T1931 | T1930 | punct | ),MTb |
| R1414 | T1932 | T1928 | punct | ",",tuberculosis |
| R1417 | T1933 | T1935 | det | the,agent |
| R1419 | T1934 | T1935 | compound | causative,agent |
| R1420 | T1935 | T1928 | appos | agent,tuberculosis |
| R1421 | T1936 | T1935 | prep | of,agent |
| R1422 | T1937 | T1936 | pobj | tuberculosis,of |
| R1423 | T1938 | T1937 | punct | (,tuberculosis |
| R1424 | T1939 | T1937 | appos | TB,tuberculosis |
| R1425 | T1940 | T1937 | punct | ),tuberculosis |
| R1426 | T1941 | T1928 | punct | ",",tuberculosis |
| R1427 | T1942 | T1942 | ROOT | is,is |
| R1429 | T1943 | T1946 | det | the,co-infection |
| R1431 | T1944 | T1945 | advmod | most,common |
| R1435 | T1945 | T1946 | amod | common,co-infection |
| R1437 | T1946 | T1942 | attr | co-infection,is |
| R1439 | T1947 | T1946 | cc | and,co-infection |
| R1442 | T1948 | T1946 | conj | cause,co-infection |
| R1445 | T1949 | T1948 | prep | of,cause |
| R1449 | T1950 | T1949 | pobj | death,of |
| R1451 | T1951 | T1942 | prep | in,is |
| R1453 | T1952 | T1951 | pobj | patients,in |
| R1456 | T1953 | T1952 | acl | infected,patients |
| R1460 | T1954 | T1953 | prep | with,infected |
| R1464 | T1955 | T1956 | amod | human,immunodeficiency |
| R1471 | T1956 | T1957 | compound | immunodeficiency,virus |
| R1475 | T1957 | T1958 | compound | virus,type |
| R1479 | T1958 | T1954 | pobj | type,with |
| R1484 | T1959 | T1958 | nummod | 1,type |
| R1487 | T1960 | T1958 | punct | (,type |
| R1492 | T1961 | T1958 | appos | HIV-1,type |
| R1496 | T1962 | T1958 | punct | ),type |
| R1500 | T1963 | T1965 | nmod | [,] |
| R1504 | T1964 | T1965 | nummod | 1,] |
| R1508 | T1965 | T1942 | npadvmod | ],is |
| R1510 | T1966 | T1965 | punct | ",",] |
| R1515 | T1967 | T1969 | nmod | [,] |
| R1522 | T1968 | T1969 | nummod | 2,] |
| R1527 | T1969 | T1965 | appos | ],] |
| R1531 | T1970 | T1942 | punct | .,is |