PMC:3320587 / 221-474
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T237 | 248-250 | IN | denotes | of |
| T236 | 237-247 | NN | denotes | expression |
| T235 | 233-236 | DT | denotes | the |
| T234 | 230-232 | IN | denotes | of |
| T233 | 220-229 | NN | denotes | silencing |
| T232 | 215-219 | IN | denotes | that |
| T231 | 203-214 | VB | denotes | demonstrate |
| T230 | 200-202 | PRP | denotes | we |
| T229 | 198-199 | -COMMA- | denotes | , |
| T228 | 194-198 | RB | denotes | Here |
| T227 | 188-192 | NN | denotes | load |
| T226 | 182-187 | JJ | denotes | viral |
| T225 | 179-181 | IN | denotes | in |
| T224 | 170-178 | NN | denotes | increase |
| T223 | 167-169 | DT | denotes | an |
| T222 | 164-166 | TO | denotes | to |
| T221 | 156-163 | VB | denotes | leading |
| T220 | 154-155 | -COMMA- | denotes | , |
| T219 | 143-154 | NN | denotes | replication |
| T218 | 137-142 | NN | denotes | HIV-1 |
| T217 | 127-136 | VB | denotes | stimulate |
| T216 | 122-126 | WDT | denotes | that |
| T215 | 113-121 | NN | denotes | cascades |
| T214 | 103-112 | NN | denotes | signaling |
| T213 | 96-102 | JJ | denotes | immune |
| T212 | 87-95 | JJ | denotes | adaptive |
| T211 | 83-86 | CC | denotes | and |
| T210 | 76-82 | JJ | denotes | innate |
| T209 | 65-75 | VB | denotes | activating |
| T201 | 2-5 | NN | denotes | HIV |
| T202 | 6-17 | JJ | denotes | co-infected |
| T203 | 18-26 | NN | denotes | patients |
| T204 | 27-38 | VB | denotes | contributes |
| T205 | 39-41 | TO | denotes | to |
| T206 | 42-51 | VB | denotes | increased |
| T207 | 52-61 | NN | denotes | mortality |
| T208 | 62-64 | IN | denotes | by |
| R45 | T215 | T214 | arg1Of | cascades,signaling |
| R46 | T215 | T216 | arg1Of | cascades,that |
| R47 | T215 | T217 | arg1Of | cascades,stimulate |
| R48 | T217 | T220 | arg1Of | stimulate,"," |
| R49 | T217 | T221 | modOf | stimulate,leading |
| R50 | T219 | T217 | arg2Of | replication,stimulate |
| R51 | T219 | T218 | arg1Of | replication,HIV-1 |
| R52 | T221 | T222 | arg1Of | leading,to |
| R53 | T224 | T222 | arg2Of | increase,to |
| R54 | T224 | T223 | arg1Of | increase,an |
| R55 | T224 | T225 | arg1Of | increase,in |
| R56 | T227 | T225 | arg2Of | load,in |
| R57 | T227 | T226 | arg1Of | load,viral |
| R58 | T230 | T231 | arg1Of | we,demonstrate |
| R59 | T231 | T228 | arg1Of | demonstrate,Here |
| R60 | T231 | T229 | arg1Of | demonstrate,"," |
| R61 | T233 | T234 | arg1Of | silencing,of |
| R63 | T236 | T234 | arg2Of | expression,of |
| R64 | T236 | T235 | arg1Of | expression,the |
| R65 | T236 | T237 | arg1Of | expression,of |
| R38 | T209 | T208 | arg2Of | activating,by |
| R39 | T210 | T211 | arg1Of | innate,and |
| R40 | T212 | T211 | arg2Of | adaptive,and |
| R41 | T215 | T209 | arg2Of | cascades,activating |
| R42 | T215 | T210 | arg1Of | cascades,innate |
| R43 | T215 | T212 | arg1Of | cascades,adaptive |
| R44 | T215 | T213 | arg1Of | cascades,immune |
| R494 | T203 | T201 | arg1Of | patients,HIV |
| R495 | T203 | T202 | arg1Of | patients,co-infected |
| R496 | T204 | T205 | arg1Of | contributes,to |
| R497 | T204 | T208 | arg1Of | contributes,by |
| R498 | T207 | T205 | arg2Of | mortality,to |
| R499 | T207 | T206 | arg2Of | mortality,increased |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T102 | 103-121 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling cascades |
| T100 | 103-112 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T767 | 220-229 | Negative_regulation | denotes | silencing |
| T768 | 237-247 | Gene_expression | denotes | expression |
| R591 | T768 | T767 | themeOf | expression,silencing |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T452 | 237-247 | Gene_expression | denotes | expression |
| T453 | 220-229 | Negative_regulation | denotes | silencing |
| R517 | T452 | T453 | themeOf | expression,silencing |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T432 | 237-247 | Gene_expression | denotes | expression |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T568 | 203-214 | VBP | denotes | demonstrate |
| T567 | 200-202 | PRP | denotes | we |
| T566 | 198-199 | , | denotes | , |
| T565 | 194-198 | RB | denotes | Here |
| T564 | 192-193 | . | denotes | . |
| T563 | 188-192 | NN | denotes | load |
| T562 | 182-187 | JJ | denotes | viral |
| T561 | 179-181 | IN | denotes | in |
| T560 | 170-178 | NN | denotes | increase |
| T559 | 167-169 | DT | denotes | an |
| T558 | 164-166 | TO | denotes | to |
| T557 | 156-163 | VBG | denotes | leading |
| T556 | 154-155 | , | denotes | , |
| T555 | 143-154 | NN | denotes | replication |
| T554 | 137-142 | JJ | denotes | HIV-1 |
| T553 | 127-136 | VBP | denotes | stimulate |
| T552 | 122-126 | WDT | denotes | that |
| T551 | 113-121 | NNS | denotes | cascades |
| T550 | 103-112 | VBG | denotes | signaling |
| T549 | 96-102 | JJ | denotes | immune |
| T548 | 87-95 | JJ | denotes | adaptive |
| T547 | 83-86 | CC | denotes | and |
| T546 | 76-82 | NN | denotes | innate |
| T545 | 65-75 | VBG | denotes | activating |
| T544 | 62-64 | IN | denotes | by |
| T543 | 52-61 | NN | denotes | mortality |
| T542 | 42-51 | VBN | denotes | increased |
| T541 | 39-41 | TO | denotes | to |
| T540 | 27-38 | VBZ | denotes | contributes |
| T539 | 18-26 | NNS | denotes | patients |
| T538 | 6-17 | VBD | denotes | co-infected |
| T537 | 2-5 | NNP | denotes | HIV |
| T569 | 215-219 | IN | denotes | that |
| T570 | 220-229 | VBG | denotes | silencing |
| T571 | 230-232 | IN | denotes | of |
| T572 | 233-236 | DT | denotes | the |
| T573 | 237-247 | NN | denotes | expression |
| T574 | 248-250 | IN | denotes | of |
| R291 | T538 | T539 | amod | co-infected,patients |
| R294 | T541 | T540 | prep | to,contributes |
| R295 | T542 | T543 | amod | increased,mortality |
| R296 | T543 | T541 | pobj | mortality,to |
| R297 | T544 | T540 | prep | by,contributes |
| R298 | T545 | T544 | pcomp | activating,by |
| R299 | T546 | T545 | dobj | innate,activating |
| R300 | T547 | T546 | cc | and,innate |
| R301 | T548 | T550 | amod | adaptive,signaling |
| R302 | T549 | T550 | amod | immune,signaling |
| R303 | T550 | T545 | conj | signaling,activating |
| R304 | T551 | T550 | dobj | cascades,signaling |
| R305 | T552 | T553 | nsubj | that,stimulate |
| R306 | T553 | T551 | relcl | stimulate,cascades |
| R307 | T554 | T555 | compound | HIV-1,replication |
| R308 | T555 | T553 | dobj | replication,stimulate |
| R309 | T556 | T550 | punct | ",",signaling |
| R310 | T557 | T550 | conj | leading,signaling |
| R311 | T558 | T557 | prep | to,leading |
| R312 | T559 | T560 | det | an,increase |
| R313 | T560 | T558 | pobj | increase,to |
| R314 | T561 | T560 | prep | in,increase |
| R315 | T562 | T563 | amod | viral,load |
| R316 | T563 | T561 | pobj | load,in |
| R318 | T565 | T568 | advmod | Here,demonstrate |
| R319 | T566 | T568 | punct | ",",demonstrate |
| R320 | T567 | T568 | nsubj | we,demonstrate |
| R321 | T568 | T568 | ROOT | demonstrate,demonstrate |
| R529 | T571 | T570 | prep | of,silencing |
| R530 | T572 | T573 | det | the,expression |
| R531 | T573 | T571 | pobj | expression,of |
| R532 | T574 | T573 | prep | of,expression |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T130 | 220-229 | Negative_regulation | denotes | silencing |
| T129 | 220-229 | Negative_regulation | denotes | silencing |
| T128 | 220-229 | Negative_regulation | denotes | silencing |
| T127 | 237-247 | Gene_expression | denotes | expression |
| T125 | 237-247 | Gene_expression | denotes | expression |
| T126 | 237-247 | Gene_expression | denotes | expression |
| R19 | T127 | T130 | themeOf | expression,silencing |
| R469 | T125 | T128 | themeOf | expression,silencing |
| R470 | T126 | T129 | themeOf | expression,silencing |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 220-229 | Negative_regulation | denotes | silencing |