PMC:3320587 / 21298-21521
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8319 | 221-222 | -RRB- | denotes | ) |
| T8318 | 210-221 | NN | denotes | HIV-192TH64 |
| T8317 | 209-210 | -LRB- | denotes | ( |
| T8316 | 207-208 | NN | denotes | E |
| T8315 | 204-206 | CC | denotes | or |
| T8314 | 202-203 | -COMMA- | denotes | , |
| T8313 | 201-202 | -RRB- | denotes | ) |
| T8312 | 190-201 | NN | denotes | HIV-198IN22 |
| T8311 | 189-190 | -LRB- | denotes | ( |
| T8310 | 187-188 | NN | denotes | C |
| T8309 | 185-186 | -COMMA- | denotes | , |
| T8308 | 184-185 | -RRB- | denotes | ) |
| T8307 | 176-184 | JJ | denotes | HIV-1Bal |
| T8306 | 175-176 | -LRB- | denotes | ( |
| T8305 | 173-174 | NN | denotes | B |
| T8304 | 165-172 | NN | denotes | subtype |
| T8303 | 162-164 | IN | denotes | of |
| T8302 | 146-161 | NN | denotes | representatives |
| T8301 | 136-145 | JJ | denotes | R5-tropic |
| T8300 | 119-135 | JJ | denotes | heat-inactivated |
| T8299 | 116-118 | CC | denotes | or |
| T8298 | 111-115 | JJ | denotes | live |
| T8297 | 106-110 | IN | denotes | with |
| T8296 | 102-105 | NN | denotes | MDM |
| T8295 | 92-101 | VB | denotes | infecting |
| T8294 | 89-91 | IN | denotes | by |
| T8293 | 79-88 | NN | denotes | synthesis |
| T8292 | 74-78 | NN | denotes | mRNA |
| T8291 | 68-73 | NN | denotes | NFAT5 |
| T8290 | 59-67 | VB | denotes | inducing |
| T8289 | 56-58 | IN | denotes | of |
| T8288 | 48-55 | JJ | denotes | capable |
| T8287 | 45-47 | VB | denotes | is |
| T8286 | 35-44 | NN | denotes | infection |
| T8285 | 29-34 | NN | denotes | HIV-1 |
| T8284 | 21-28 | IN | denotes | whether |
| T8283 | 8-20 | VB | denotes | investigated |
| T8282 | 3-7 | RB | denotes | also |
| T8281 | 0-2 | PRP | denotes | We |
| R6597 | T8281 | T8283 | arg1Of | We,investigated |
| R6598 | T8283 | T8282 | arg1Of | investigated,also |
| R6599 | T8286 | T8285 | arg1Of | infection,HIV-1 |
| R6600 | T8286 | T8287 | arg1Of | infection,is |
| R6601 | T8286 | T8288 | arg1Of | infection,capable |
| R6602 | T8286 | T8290 | arg1Of | infection,inducing |
| R6603 | T8286 | T8295 | arg1Of | infection,infecting |
| R6604 | T8287 | T8283 | arg2Of | is,investigated |
| R6605 | T8287 | T8284 | arg1Of | is,whether |
| R6606 | T8288 | T8287 | arg2Of | capable,is |
| R6607 | T8288 | T8289 | arg1Of | capable,of |
| R6608 | T8290 | T8289 | arg2Of | inducing,of |
| R6609 | T8290 | T8294 | arg1Of | inducing,by |
| R6610 | T8293 | T8290 | arg2Of | synthesis,inducing |
| R6611 | T8293 | T8291 | arg1Of | synthesis,NFAT5 |
| R6612 | T8293 | T8292 | arg1Of | synthesis,mRNA |
| R6613 | T8295 | T8294 | arg2Of | infecting,by |
| R6614 | T8296 | T8295 | arg2Of | MDM,infecting |
| R6615 | T8296 | T8297 | arg1Of | MDM,with |
| R6616 | T8298 | T8299 | arg1Of | live,or |
| R6617 | T8300 | T8299 | arg2Of | heat-inactivated,or |
| R6618 | T8302 | T8297 | arg2Of | representatives,with |
| R6619 | T8302 | T8298 | arg1Of | representatives,live |
| R6620 | T8302 | T8300 | arg1Of | representatives,heat-inactivated |
| R6621 | T8302 | T8301 | arg1Of | representatives,R5-tropic |
| R6622 | T8302 | T8303 | arg1Of | representatives,of |
| R6623 | T8305 | T8304 | arg1Of | B,subtype |
| R6624 | T8305 | T8306 | arg1Of | B,( |
| R6625 | T8305 | T8309 | arg1Of | B,"," |
| R6626 | T8307 | T8306 | arg2Of | HIV-1Bal,( |
| R6627 | T8308 | T8306 | arg3Of | ),( |
| R6628 | T8309 | T8315 | arg1Of | ",",or |
| R6629 | T8310 | T8309 | arg2Of | C,"," |
| R6630 | T8310 | T8311 | arg1Of | C,( |
| R6631 | T8312 | T8311 | arg2Of | HIV-198IN22,( |
| R6632 | T8313 | T8311 | arg3Of | ),( |
| R6633 | T8315 | T8303 | arg2Of | or,of |
| R6634 | T8315 | T8314 | arg1Of | or,"," |
| R6635 | T8316 | T8315 | arg2Of | E,or |
| R6636 | T8316 | T8317 | arg1Of | E,( |
| R6637 | T8318 | T8317 | arg2Of | HIV-192TH64,( |
| R6638 | T8319 | T8317 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8158 | 68-73 | Protein | denotes | NFAT5 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8400 | 68-73 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8164 | 79-88 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
| T8163 | 74-88 | http://purl.obolibrary.org/obo/GO_0009299 | denotes | mRNA synthesis |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8132 | 0-223 | Sentence | denotes | We also investigated whether HIV-1 infection is capable of inducing NFAT5 mRNA synthesis by infecting MDM with live or heat-inactivated R5-tropic representatives of subtype B (HIV-1Bal), C (HIV-198IN22), or E (HIV-192TH64). |
| T135 | 0-223 | Sentence | denotes | We also investigated whether HIV-1 infection is capable of inducing NFAT5 mRNA synthesis by infecting MDM with live or heat-inactivated R5-tropic representatives of subtype B (HIV-1Bal), C (HIV-198IN22), or E (HIV-192TH64). |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8190 | 68-73 | Protein | denotes | NFAT5 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8704 | 79-88 | Transcription | denotes | synthesis |
| T8703 | 59-67 | Positive_regulation | denotes | inducing |
| T8694 | 68-73 | Protein | denotes | NFAT5 |
| R6971 | T8694 | T8704 | themeOf | NFAT5,synthesis |
| R6977 | T8704 | T8703 | themeOf | synthesis,inducing |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8444 | 59-67 | Positive_regulation | denotes | inducing |
| T8443 | 79-88 | Transcription | denotes | synthesis |
| T8434 | 68-73 | Protein | denotes | NFAT5 |
| R6734 | T8434 | T8443 | themeOf | NFAT5,synthesis |
| R6739 | T8443 | T8444 | themeOf | synthesis,inducing |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8424 | 59-67 | Positive_regulation | denotes | inducing |
| T8423 | 79-88 | Transcription | denotes | synthesis |
| T8414 | 68-73 | Protein | denotes | NFAT5 |
| R6720 | T8414 | T8423 | themeOf | NFAT5,synthesis |
| R6726 | T8423 | T8424 | themeOf | synthesis,inducing |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8740 | 92-145 | Regulation | denotes | infecting MDM with live or heat-inactivated R5-tropic |
| T8732 | 111-145 | Entity | denotes | live or heat-inactivated R5-tropic |
| T8730 | 68-88 | Protein | denotes | NFAT5 mRNA synthesis |
| T8715 | 102-105 | Protein | denotes | MDM |
| R6981 | T8715 | T8740 | themeOf | MDM,infecting MDM with live or heat-inactivated R5-tropic |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8611 | 222-223 | . | denotes | . |
| T8610 | 221-222 | -RRB- | denotes | ) |
| T8609 | 210-221 | NNP | denotes | HIV-192TH64 |
| T8608 | 209-210 | -LRB- | denotes | ( |
| T8607 | 207-208 | NNP | denotes | E |
| T8606 | 204-206 | CC | denotes | or |
| T8605 | 202-203 | , | denotes | , |
| T8604 | 201-202 | -RRB- | denotes | ) |
| T8603 | 190-201 | NNP | denotes | HIV-198IN22 |
| T8602 | 189-190 | -LRB- | denotes | ( |
| T8601 | 187-188 | NNP | denotes | C |
| T8600 | 185-186 | , | denotes | , |
| T8599 | 184-185 | -RRB- | denotes | ) |
| T8598 | 176-184 | JJ | denotes | HIV-1Bal |
| T8597 | 175-176 | -LRB- | denotes | ( |
| T8596 | 173-174 | NN | denotes | B |
| T8595 | 165-172 | NN | denotes | subtype |
| T8594 | 162-164 | IN | denotes | of |
| T8593 | 146-161 | NNS | denotes | representatives |
| T8592 | 136-145 | JJ | denotes | R5-tropic |
| T8591 | 119-135 | JJ | denotes | heat-inactivated |
| T8590 | 116-118 | CC | denotes | or |
| T8589 | 111-115 | JJ | denotes | live |
| T8588 | 106-110 | IN | denotes | with |
| T8587 | 102-105 | NNP | denotes | MDM |
| T8586 | 92-101 | VBG | denotes | infecting |
| T8585 | 89-91 | IN | denotes | by |
| T8584 | 79-88 | NN | denotes | synthesis |
| T8583 | 74-78 | NNP | denotes | mRNA |
| T8582 | 68-73 | NNP | denotes | NFAT5 |
| T8581 | 59-67 | VBG | denotes | inducing |
| T8580 | 56-58 | IN | denotes | of |
| T8579 | 48-55 | JJ | denotes | capable |
| T8578 | 45-47 | VBZ | denotes | is |
| T8577 | 35-44 | NN | denotes | infection |
| T8576 | 29-34 | NNP | denotes | HIV-1 |
| T8575 | 21-28 | IN | denotes | whether |
| T8574 | 8-20 | VBD | denotes | investigated |
| T8573 | 3-7 | RB | denotes | also |
| T8572 | 0-2 | PRP | denotes | We |
| R6848 | T8572 | T8574 | nsubj | We,investigated |
| R6849 | T8573 | T8574 | advmod | also,investigated |
| R6850 | T8574 | T8574 | ROOT | investigated,investigated |
| R6851 | T8575 | T8578 | mark | whether,is |
| R6852 | T8576 | T8577 | compound | HIV-1,infection |
| R6853 | T8577 | T8578 | nsubj | infection,is |
| R6854 | T8578 | T8574 | ccomp | is,investigated |
| R6855 | T8579 | T8578 | acomp | capable,is |
| R6856 | T8580 | T8579 | prep | of,capable |
| R6857 | T8581 | T8580 | pcomp | inducing,of |
| R6858 | T8582 | T8583 | compound | NFAT5,mRNA |
| R6859 | T8583 | T8584 | compound | mRNA,synthesis |
| R6860 | T8584 | T8581 | dobj | synthesis,inducing |
| R6861 | T8585 | T8581 | prep | by,inducing |
| R6862 | T8586 | T8585 | pcomp | infecting,by |
| R6863 | T8587 | T8586 | dobj | MDM,infecting |
| R6864 | T8588 | T8586 | prep | with,infecting |
| R6865 | T8589 | T8593 | amod | live,representatives |
| R6866 | T8590 | T8589 | cc | or,live |
| R6867 | T8591 | T8589 | conj | heat-inactivated,live |
| R6868 | T8592 | T8593 | amod | R5-tropic,representatives |
| R6869 | T8593 | T8588 | pobj | representatives,with |
| R6870 | T8594 | T8593 | prep | of,representatives |
| R6871 | T8595 | T8596 | compound | subtype,B |
| R6872 | T8596 | T8594 | pobj | B,of |
| R6873 | T8597 | T8598 | punct | (,HIV-1Bal |
| R6874 | T8598 | T8596 | appos | HIV-1Bal,B |
| R6875 | T8599 | T8598 | punct | ),HIV-1Bal |
| R6876 | T8600 | T8601 | punct | ",",C |
| R6877 | T8601 | T8586 | npadvmod | C,infecting |
| R6878 | T8602 | T8601 | punct | (,C |
| R6879 | T8603 | T8601 | appos | HIV-198IN22,C |
| R6880 | T8604 | T8601 | punct | ),C |
| R6881 | T8605 | T8601 | punct | ",",C |
| R6882 | T8606 | T8601 | cc | or,C |
| R6883 | T8607 | T8601 | conj | E,C |
| R6884 | T8608 | T8607 | punct | (,E |
| R6885 | T8609 | T8607 | appos | HIV-192TH64,E |
| R6886 | T8610 | T8607 | punct | ),E |
| R6887 | T8611 | T8574 | punct | .,investigated |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8179 | 59-67 | Positive_regulation | denotes | inducing |
| T8178 | 79-88 | Gene_expression | denotes | synthesis |
| T8177 | 68-78 | Protein | denotes | NFAT5 mRNA |
| R6501 | T8177 | T8178 | themeOf | NFAT5 mRNA,synthesis |
| R6502 | T8178 | T8179 | themeOf | synthesis,inducing |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8107 | 59-67 | Positive_regulation | denotes | inducing |
| T8100 | 68-73 | Protein | denotes | NFAT5 |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8123 | 68-73 | Protein | denotes | NFAT5 |
| T8115 | 68-73 | Protein | denotes | NFAT5 |